ID:

Thla_scaffold1_LINE-L1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

454

Start:

263220  

End:

263673

Strand:

-

>Thla_scaffold1_LINE-L1_1

ATCAAAAGCATGAAACTCCAATGGTAATGAAAACACATAGTTTGCTAAACTATCAGCTAGATAGTTAACTTCCCTATACACGTGTGATATACAGACTGATCAGTCTTTTTCGAGGAAGCTATAGCACAAGTGTACCAGGAAGGATAGCGGATGTGAGTCAGCAAATCCTTGTCTTGAAAAATCCCACCACGAGCTCCGAGTCAACCTCTACTTCTAGTCTCGACACTCGCTTCTCCCAAGCTGTGTACAATCCATTGTAAAGCCCCCAAAGCTCTGCCAATGATGCAGAGCATCGTCCGATGTTCACTGCAAAACCTCCACACCAATTTCCATCACCATCCCGTAGTACTCCCCCAGCTGTAGCTATTCCAGGATACCCTCTCGAAACACCATATGTGTTTAACTTTATCCATCTTTCTGCTGGAGTTACCTATCGTATCATTTTCTCCACCCT

ID:

Thla_scaffold1_LINE-L1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

165

Start:

963797  

End:

963961

Strand:

+

>Thla_scaffold1_LINE-L1_2

CTCTCTTTTCCATCTTTTGTTTTGTTATATCTCAGGTTGTGATAACGTTCGTGCATATCGTCTCACTAAAACAGCACGAACACGGAAAATTTTCTTGTTTTCATGTAAGCTCTCGAGTTCTAAATTGGTTTTTTCCCATGGGAAGTCTTTTCCCACAAGCTTGAT

ID:

Thla_scaffold10_LINE-L1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

117

Start:

46219  

End:

46335

Strand:

+

>Thla_scaffold10_LINE-L1_3

AAGGAAACCTACGGAATCATCCAGGACATCAAAACTCTTTCTCTATCTTTCGCTTTTATCGCTTTCTCTCATATTCCAAGATCGGAAAATGGTTTAGCCGATTCACTGGCTAAAGCT

ID:

Thla_scaffold10_LINE-L1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

404

Start:

120801  

End:

121204

Strand:

-

>Thla_scaffold10_LINE-L1_4

TTTTTTTTGGTTGAAGGAGTTTCCGTAATTTATTAAGTAATATTGATTGAACTAGAACCGAATATATTGTGATTTTGTATACCATTAGCATCCTCTAACACAAATTAAAGTAATGTTATATGGTTTCGAATTAAACAAATGCAAACTTAAAAATAAAGAAAACATATAATTTGCTAATTCGCTTCTCGATACATATAAATAATCTCGATTATCTAATTCTTTGATATAAAGTTATAACACAGTTTTAGTAAAAAAGATAGAGGATGAGAATCACTTATTTCCGTTTTAAGAAAACTAACCACAATTTTTGAATCCATCTCTAATTCCAAACTAGTGACTTAGTGTTTCTCTGCTATGAAAAGTCTATAGTAAACTATAACTCAGCTAACGGTACCAACTCCCAA

ID:

Thla_scaffold10_LINE-L1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

184

Start:

352351  

End:

352534

Strand:

+

>Thla_scaffold10_LINE-L1_5

AAGATCAAGATCCTCTCATTGGATACTGAAAAATTATGAGAGAGGCATTACCGGTTGGAGAAAACCTAAAGGAAAGAAATGTCAATATTACAGTGTGATGTTCTTCTTACTATGACGAAACAGAAACTAAAATCCATCTCCTATTCCATTGCTCCTTCTCAGCCGAAATCTGGAAACAAATTTC

ID:

Thla_scaffold10_LINE-L1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

361

Start:

370742  

End:

371102

Strand:

-

>Thla_scaffold10_LINE-L1_6

TCTTTTTTTTTGTCAACAGTCTCTTTTCTCATAACGGTTGAGAAATCCAAACCGGTAGATTTGAATTTATATAGTGTATAGAATAAAGGTAGTCGCGGGCACTCTGTGCCAACTTGTCTGCTTTTGTGTTTTGAGCGTGTGGGATGTGCGAGATCGAGAAGGAAGTAAAATTTTTCTTGCTTGTTTCAAATTCCTCCAAGTGCAGAGTGAAGACCGACCATTCCTCATGTTTTGAAACCATCTTCACCAGTTTGAAACAGTCAGTGACGAAAGCCATCCGTAGCCTTCCAGCGTCGAACATGCTGGGCATCGCCCATATTAGAGCTTCTAGTTTTGTGTGTAATGGGGAGAGGCTTCGTCG

ID:

Thla_scaffold10_LINE-L1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

393

Start:

371297  

End:

371689

Strand:

-

>Thla_scaffold10_LINE-L1_7

GTTGAGCTAAAAATCAAGCTGCCGATTCTGCTTGTGCAGTTTTTAAAAATTTCCTAGGATCTCTCGTGATGATTGTGTATTTTTTTTTATTATTTTTTGCTTTCCAGATATACCAAATTAACCATGAAAATACTTCCATATCTTCCGAGTTTGGTAACTGCCAAAAAAGATGAGCAATATTTGTATACAATGTTGCCGTTGGAAATCCCATAAATGGTGTCGGTATTACCGAAAGTGCTCACACTTGAAGTGCCGGTGGGCATTCGAATAGTGTGTGATTAATGGTCTTCCTCTATGCTCCACATCTACCACATTGTGGATCTCAATTCATTCCTCGTTTATTCAACCTGTCAAAGACCGAAATACAGCCGGAAAAGGGTTGCTAGAGAAAAT

ID:

Thla_scaffold10_LINE-L1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

194

Start:

456641  

End:

456834

Strand:

-

>Thla_scaffold10_LINE-L1_8

TTTGCTTCTTTCGGGCTCTAAGTGAATTTAACTTCTTCAAATTTTGTTGACTAGAACCAGGTTTCTCTGAGCCAATTGAGCATCCCAAAATGCAGACTCTGTTTAGTCACTAGACTTATGAGAGACTTTGAGTCTCCTTCAAATATAATCCTTCGATAACCTCTGGACCAGCAGTGTTGCATTGCGATAATTAG

ID:

Thla_scaffold10_LINE-L1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

870

Start:

647642  

End:

648511

Strand:

-

>Thla_scaffold10_LINE-L1_9

TTTTTTTTTTTTTGTCGACAGCCTCAACATACATCCTAAAATGGTGTTAACCATGTAGGAGGTGTTGAGTTTACATAATGAAAATAAAAAAAATGATCTCGAGCACTTCGTGCTAACTTGTCTGCCTTCGTGTTCTGCGCGCGTAATATATTTGAGATAGAGAATTGAACAAACTCCTGTCTAGTCACTTCATATTCCTCTAAATGTAATGAGAATGCTGGCCATCCTTCTGGATCATACACCATCTTCAATAATTCCAAACTATCCGTAAAAAAAGATACTGCATATCTTCCAGCATCTAGCATATAATGCATTGCCCAAATAAGTGTCTTTAGCTCTGTGTGTAGCGGTGTCAAACTCTTACCCAATTTTCGGGCACCTATTAATGTACTCGACATATTTGCATCTTCACTAAACCAGCCTAACCCTGTGTTTGGGGTTTCCTCTTTCCATGAACCATCAGTGAAACAGAGAATACCCCCCTGGGATAATTCTCGTTTTGACATGGTTGTGAAACTTCACCCGTTAATTCTTTTTTCTGCGCTTCGGCCCAGGCATTTGCTTCTGCCGTTGCCGTCTTAACAACATCTTGGAGTCCCGATCAATGTTTTTAAAATTTTTGTCATTCTTCATCTTCCAAATGTACCATAATAGCCAATGATACATCATCATATCCTCCTGGTCTAGCAAATTCCAAAACAAATGTGCTATATTTGAATACAATGCTTCCGTTGAGAAACGATGTAACGATGTAGGTATTAGCGAAAGCACCTACACCTGAAAAGTCGGAGAACAGTCGAAAAAAGTATGGTTTATAGTTTCATTTTCTGCCCCACAACGACTATATCTGGGGTCACAATTTATGCCTCT

ID:

Thla_scaffold10_LINE-L1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

207

Start:

661994  

End:

662200

Strand:

+

>Thla_scaffold10_LINE-L1_10

TTTTTCAATAATCGTATAAACGATGTAGAAATATTTGATCAATGTAAATAAAAAGTTTCACTTTTTCGTGTATGGAGGCCCTATCCTCGAACATGTTGTAGAGATTTGATATGGGAGAGACTCGAGAGAATTGGTACTACAAGACCAGGCCAATACGGTCAACGGTTTGAGATTTTTACGAATTTTTGGGAATCATGAAAAATCAGG

ID:

Thla_scaffold10_LINE-L1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

307

Start:

1284353  

End:

1284659

Strand:

-

>Thla_scaffold10_LINE-L1_11

TTTTTTTTGGTAGGAGGGGTGGGGAGACATTGTCTCCTGATTTTATTTAAAACATAAAAATCAGCTACACACAAACTTCGCGCAGAACCGAGCATATCGTAACTGAAAATCGAAACTAAACTAGGTGGAACCGAATCTAAAAACTGGACACCTAGAGGAAGAGAAAAAGCAGAGTTAGATAATCCATGAGCAAGACAATTAGTTTTTTTGTTAGAAAAAAAGACAATTAGCTTTTCTATACACATATGAAAAACGGACTATCCATTCTCTCGAAATAAAGTTATGATACATATGTACTAGAAAACAG

ID:

Thla_scaffold10_LINE-L1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

758

Start:

1317533  

End:

1318290

Strand:

-

>Thla_scaffold10_LINE-L1_12

CCATCACCAATTGATGTCAGCAAGCCCAGTTTCAACAGGTCTCTTCCATGTAGAATGCTACGCCAAGCATAAGACGGTCTAGAGCCCATCCCACAATCTACAAAGGGAGCATTACGGAAGTACCGTTGCTTCAGTATTCTCGAAAGTAAAGAATCGGGTTTGCTCAAGATTCTCCACGCCTGTTTGCCTAGGAGAGCTTGGTTGAAATGGCTGATGTCATGGAAGCCTAGCCCACCGCTTTCCTTTGATTTGCATAATCTTTTCCAGGCCACCCAAGATATTTTGTTTCTGTTATTCCCACTACTCCACCAAAAGTCTACCATGATGCTTGTTAACTTCTCACATAATCCTTTTGGCAATTTAAAACATGACATAGCAAAGACTGGCATTGCCAGACCCACCGCTTTCAACAGAATTTCCTTGCCTCCTTGTGAGAGTGATTGAGCATACCATCCATGGACCCTGTTTTTAAGCTTTTCCTTGATAAAATTCAACATTTTACTCTTAGATTCACTAAAACACTCAGGTAGTCCTAGGTAAGTGCCTTCACCTTCTTCTTTATCTATTCCCAAGGCTATTTTGATCTCATTTTTGACGTCCTCTTTTATCTTCGAGCCAAATATAATTGACGACATTGTCTTATTAATTAGCTGTCCAGAGGCATCACCATATAACTTCAGACATCTTGTTATCTCATTTGCTTCAGCAATTGATGCTTTACACATGAGTTGACTGTCGTCTGCGAACAACAGATGATG

ID:

Thla_scaffold10_LINE-L1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

124

Start:

1318639  

End:

1318762

Strand:

-

>Thla_scaffold10_LINE-L1_13

ATCCTTTTTTTAACTTTTCTCCCTTTCACATAATTGTGAAAATAAGTCGTGTTTCTGTCCCCCGATTTCAACCATTCTTCTCTGCTCTTTTGTTGCCAAAATATCTCTTCGTCACGATAAGCCT

ID:

Thla_scaffold10_LINE-L1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

587

Start:

1319056  

End:

1319642

Strand:

-

>Thla_scaffold10_LINE-L1_14

CTCCACCCAGCCCACGAAAATGTGTTACCCAAGCTCCTAATATCTTTTAGCTTACAATTTTCAGCCATGTTTCGAAAATCCCAGAAGGTGGAATCGTTCCTAGCCGATCCCCCAAGCTTTTCTTCATTGTTCATAAGCTCGTTAAAATCTCCTACAAGTATCCATGCTTCGTCTCGTACTAATCCCAATCCTGTGAGCCTCTCCCATACTTCTCTCCTCCTTCCACGTACCGGATCCCCATACACACAAGTTAGAAAGAAAAGAGTGGATCCCATCTTGACCCTCATGTCTATTATTCTCTTATTCATCTCAAGAACCTCTACCTTGTAACTATCCTTCCACATTACAGCTAATCCCCCGCTCAAGCCAATTGGCTCTACTGTTATCAGCTGATCATAACCCAAACCATTCTTCAGACTCGTAACAAACTCCTTCTTTTGCTTAGTTTCCATAAGAAATAAAAAGTCCGGAAAATACTTTCTTCGTATTTCCCGGAGTCGTCGAACTGTCTCAGTGCTTCCTGCACCTTGACAGTTCCAGCTCAGAATACTCATTGGGATGGCAGCGGCTTCAAATCGGAAGCCACC

ID:

Thla_scaffold10_LINE-L1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

297

Start:

1320646  

End:

1320942

Strand:

-

>Thla_scaffold10_LINE-L1_15

TGTAGTAGTTTACCGGGATGTTCCTGATTCTGATCCAAACGTCTACTGAGGTGAGGAAATCTGAGGGAGGAGAGGGGATCCATCTGTCTAATAGCATAGTCCATTAGTTGTACGACCACGGGCGATCCTTCAGAACTGTTTCCATATCTTCTTCCCTTTGGAAGATGAACTGAAACTTGTCTCTTGACAATGCTATGCCACGAACTCTGTCGTACACCCTCCAAATTCGAGGCATATCTTCAATCATCATATTCATTGGTTGGCAATCAGGGTTCAGGAGGCGGCCGAGCAGACTCA

ID:

Thla_scaffold10_LINE-L1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

313

Start:

1480035  

End:

1480347

Strand:

-

>Thla_scaffold10_LINE-L1_16

TTTTTTTTGTAAGAGGGGGTGGAAGAGACATTGTCTCCTGATTTTATTCAAAACATAAAAACCAGCTACACACAAACTCTTCTTGGACGCGCAGAACCGATCATATCGTAACTGAAAATCGAAACTAAACTAGGTGGAACCGAATCTAAAAACTGGACACCTAGATGAAGGAAAAAAACAGAGTTAGCTAATCCATCAGCAAGATAATTAGCTTTTCTGTTAGCAAAAAAAAACAATTAGTTTTTCTATACACATATAAAAAACAAACTATTAATTCTTTCGAAATAAAGTCATGATATATATATACCAGAAA

ID:

Thla_scaffold10_LINE-L1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1429

Start:

1682123  

End:

1683551

Strand:

-

>Thla_scaffold10_LINE-L1_17

GCCAAAAAGCAGAGTTTGCCAACCAAATGATGGTTGTGAGCCTCGTGTTGCAGTAAGAAGCGAGCCATTTTTGAAATAACATCCTTGTAATACTTTGTAGAGAAGACAGTGCGGTCGTTGCATCAATTTCCACACTTGGTTAGCAACAAGTGCTTGGTTAAATTTGTGGAGATCGCGGAAACCCAGACCTTCTTTAGCTTTTGTTGTGGAGAGTTTTTGCCATGAAACCCAGGATATCTTACGATGAGGATGTGTACCACCCCACCAGAAGCGGGACAATAAACTATTGAGGTCCTTACAGAGTGCTATTGGTAATTGGAAGTAATTCATTGAGTAAACAGGCATTGCAAATGCCACCGATTTGAGGAAAACTTCCTTGCCAGCAGTAGAGAGAAAACGGTTCTGCCAACCATTTATCTTTTGAGTAACACATGTTTTGTTATACGCAAACATTTCCTTTTTGCTGCGACCAAATTGTTCTGGTAAACCAAGATATTTTCCACCACCGCCCATGTTTTGAATCTGTAAGATTTGTTTCACAGACTCTCGAGTATGATGAAAAACTCTGTCGCCAAAGGTGATTGCGGATTTGGTAAAGTTTATAAGCTAACCCGAGGCTCTGCCATAAATTTGAAAAATCTCAGAAAGCGCTTTGCTGTTTCGGTGATCAGCCTTCACAAAGAGAGAATCATCGGCAAAAAGTAAGTGAGATAAAGGGGGACCACCAATATTAAGTCTGATGGGTTGGATTTCGTTGTTTCGTGTTGCAGCATCCATCAAAGAACTTAGTACATCTGCGCAAAGTATAAAGAGATATGGAGACAAAGGATCACCTTGTCGTAGACCGCGTGATGGGTGAAACAAGCCGTAAGGACTGCCGTTGATCAGGACAGAGAAGGAGACAGAACGCACACAAGCCATTGTCCATTGTATCCATTTATCGGAGAAACCTTTTTGTGTAGTACAGCCTCCAGGAAATCCCATTCTATACGATCGTAGACCTTACTTATATCAGTTTTAACAGCCATATAAGAGTTTGCACATCTCTTACGGACGCGGAGGGCATGTAGTGCTTCATGTGCGAGGAGGACATTGTCAGTGATGTATCTCCCAGGAATAAAGGCCGCTTGATTGTCGGACACCACTTGAGAGAGTATGCTTTTAAGTCGGAAGACCATTATTTTGGAGATAACTTTGTAAAGAACATTACAAAGGGCAATCGGCCTGAAATCTTTCATAGACAATGATGTGTCGAGTTTTGGGATTAAGCAGATATTAGTATGATTCAGAGTAGCTTTCATGGTTCCAGATTCAAAGAAAGTTTGGATTGCTTGCACAATGTCAGGACCCACAATATGCCAATATTTATGAAAGAAACTTGCTGTAAAGCCATCAGGACCAGGTGCTTTCGTACCCCCTATTGAAGATA

ID:

Thla_scaffold10_LINE-L1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

107

Start:

1683788  

End:

1683894

Strand:

-

>Thla_scaffold10_LINE-L1_18

GTAGAGGCATGGTAGAATCGAGTGTTACGATCTCCTTTTTTGAGCCAAGAATTACGACTTTTAAGATACCAGAATGATTCTTCATCTTTGTAAGCATATAGTAGTTG

ID:

Thla_scaffold10_LINE-L1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

305

Start:

1684373  

End:

1684677

Strand:

-

>Thla_scaffold10_LINE-L1_19

ACCATATTCCGAAAATTCACTAAACTCCATTCATCTCTCACTCGACTTCCTCTTGTTTCGTTTGGATTCAGAATTTCATTAAAGTCGCCACACATTAACCAAGGACCAACTCTGTCACTCGATAATCTCTCGAGTTGTTCCCAAAGGTGATGCCTTAATTGACGAATGGGATGGCCATAAATGCACGACAAGTAGAAAGAAAATTCTTTATTCATTATCTTACAATCGAGCATTCTTTCATCACAAGAGATGAATGTTACATTCAGTGACTTTTTCCGCATTAAGGCTAAACCCCCCCCCCCCCC

ID:

Thla_scaffold10_LINE-L1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

507

Start:

1685226  

End:

1685732

Strand:

-

>Thla_scaffold10_LINE-L1_20

GTTATGAGAGAGAAGTCCACAAATAGAGCAGAAACCTCTCAGTTTCTCGTAGTGAAAGCGCAAAACTGAAATTTGACCATCAAAGTTGAAGATGCGTTGAAAGCGTAGTGGCATATCGATATTCCAAAGTATTCGTACACGAACATAATCAACATGTAAAGCACCATCGCCATTGAAATCTGTTTCAAGGAAGTGTCCCATCATTTCACCAATATGTATCACCATGCGTAGAGAGAGGAATTGAAGCGGGATCCTCTTTATTTGCACCCAAAAAGGAATACACTTTAGATCATCGTCGGTGTGAGAAGGGGTCCATTTCTGCAATGGACACATCCATTCGTTAAAAGACCACGGTCCTCTGCGGAGCACTGAGTTCATCGATTCCTCCGACTGAAATAAGAATTGGATCTTCTGATTGGTGATGATTCGACACACGACCTCGTCACCAAGGCCCCAGAGTCGCGGAAGAGTTGACATCATCGCACGTAGGTTTTGCTTCCTCGGATT