ID Class Order Superfamily Length Start End Strand View
R1_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA114921257921370+
R1_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA13415063171506450+
R1_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA22016153191615538+
R1_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA8926582492658337+
R1_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA10326741422674244+
R1_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA13030641153064244-
R1_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA8238556543855735+
R1_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA22251757925176013-
R1_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA9352861735286265-
R1_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA10353496395349741-
R1_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA14653948995395044-
R1_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA8958149575815045+
R1_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA18058334835833662-
R1_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA8765585426558628+
R1_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA10381589208159022-
R1_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA10383135778313679+
R1_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA11287147158714826+
R1_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA18391682309168412-
R1_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA2371029686210297098+
R1_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA2221033083110331052+

< 1 2 3 4 5 > Total 95


Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

114

Start:

921257  

End:

921370

Strand:

+

>R1_SINE-tRNA_1

TCAAATGACCGCTAGGAAAAAAACTAATATTATATGATATTGTGGTTTCGGGTAGTGATTTGGGGCTTCCACTTCGAACCTCCAATATTCAAAAAACAAATTAAAAAGAATAAA

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

134

Start:

1506317  

End:

1506450

Strand:

+

>R1_SINE-tRNA_2

GTGGAAACCCCCTTGGTCCAATGGTTTGACTAAGGGTTCATGTAATGTTTTTACACCCGGAGGTCTGGGGTTCAAACTCCAGAAAATACCAAATTATGCAGCTTTGGAGAAACGGATTACAGGAGATCTTCAAC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

220

Start:

1615319  

End:

1615538

Strand:

+

>R1_SINE-tRNA_3

AACCAACGCGTGTTGGCCTAGTGGTAAAGAAACTCCGGCTGGAGTGTCCGCCCTGGGTTCGATCCGCGTTGGCCACGAGAGCATTCACATGGGCTTTTCTCGCCCTTCAGACCACTTCGCGTAACCAGAAGCCCTTAAGTGGAAGCTTAAAAATCCTGTAATGGCATGGCATAAGCCCGGTGGGCTAGTCGATCACGCTTAGTGGTCGGATACTGGATTA

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

2658249  

End:

2658337

Strand:

+

>R1_SINE-tRNA_4

AACCGGAGCTTCTAACTCAGTTGGTAAAGGGTTCACAACTGTGAGTTCCGCCACCTGGATTTGAATCCCGGCCACTGGGGAATTAACAT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

2674142  

End:

2674244

Strand:

+

>R1_SINE-tRNA_5

AACCGGAGCTTCTAACTCAGTTGGTAAAGGGTTCACAACTGTGAGTTCCGCCACCTGGATTTGAATCCCGGCCACTGGGGAATTAACATTTCGGTATCACCAG

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

130

Start:

3064115  

End:

3064244

Strand:

-

>R1_SINE-tRNA_6

GCTGAAGATCTCTTGTAACATGTTTCTCTATAATCTGCATAATTTGGTATTTTCTGGGTTTGAACCTGAGACTTCCGGATGTAAAAGCAATTGAACCCTTAGTCAAACTACTGGATCAAGGGGCTTCCAC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

82

Start:

3855654  

End:

3855735

Strand:

+

>R1_SINE-tRNA_7

GTGGAAGCCCCCTTCGTCCAATGGTTTGACTAAGGGTTCATGTAATGATTCTACACCCGGAAGTCTGGGGTTCAAACCCCAG

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

222

Start:

5175792  

End:

5176013

Strand:

-

>R1_SINE-tRNA_8

ATAATCCAGTATTCGACCATTAAGCGTGATCGACTAGCCCACTGGGCCTAAGCCCATACCATTACAGGATTTTTAAGCCTCCATTTAAGGGTTCCTGATTACGCGAAGTGGTCTGGAGGGTGAGAAAAGCCCATGTGAAAACTCTTGTGGCCAACGCGAATTGAACCCAGGACGAGCACTCCAGCCGGAGTTCCTTTACCACTAGACCAACATGCGTTGGTT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

93

Start:

5286173  

End:

5286265

Strand:

-

>R1_SINE-tRNA_9

AAATCTGCAATAAATTGCATAGTCTGGGAATCGAACCCCAGACCTGGGTGTAGAATCCTTTAGACCTTAACCATTAGGCTAAGGTGCTTCCAC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

5349639  

End:

5349741

Strand:

-

>R1_SINE-tRNA_10

CTGGCGATGCCGAAATGTTAATTCCCCAGTGGCCAGGATTCGAACCCAGGTGGCGGAACTCACAGCTGTGAACCCTTTACCAACTGAGCTAGAAGCCCCGGTT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

146

Start:

5394899  

End:

5395044

Strand:

-

>R1_SINE-tRNA_11

TTGTTTTAGTTATAAAGAGGTTTGGGTCGAAGTTCTAATCCTCCAAACCCAAAACCATAGCATCTGGTATTAGTTACGTCCGGTGGTCACTCATACTAGAAATCTATGATATAATAGTTAGGATTCTTTCCAATTGAGGTAATGAC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

5814957  

End:

5815045

Strand:

+

>R1_SINE-tRNA_12

AACCGGGGCTTCTAGCTCAGTTGGTAAAGGGTTCACAGCTGTGAATTCCGCCACCTGGGTTCGAATCCCGGCTACTGGGGAATTAACAT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

180

Start:

5833483  

End:

5833662

Strand:

-

>R1_SINE-tRNA_13

TTTTTTTTTTTTTTGATAACCGTGGTGTGATCCCAAAGGCTTTCTAGGCCCAAGGACTAATCACCACGAGGCCCGCAAGATCCGCGTTTTCTTACCACTTAAGGCGCTCCGGGTGGCCAAGTGGAATCGAACCCAGGGCGGAAACTCCAGCCGGAGCCCCTTTACCACTAGGCCAAGACC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

87

Start:

6558542  

End:

6558628

Strand:

+

>R1_SINE-tRNA_14

AACCGGGCTTCGTAGCCTGGTGGTAATGGAACCTCGGCTGAGGTGTCCGCCACCCAGCTTCGAAACCCGGCCACAGCGATTTAACAT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

8158920  

End:

8159022

Strand:

-

>R1_SINE-tRNA_15

CTGGCGATGCCGAAATGTTAATTCCCCAGTGGCCAGAATTCGAACTCAGGTGGCAAAACTCACAGCTGTGAACTCTTTACCAACTGAGCTAGAAACCCCGGTT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

8313577  

End:

8313679

Strand:

+

>R1_SINE-tRNA_16

AACCGGGGCTTCTAGCTCAGTTGGTAAAGGGTTCACAGCTGTGAGTTCCGCCACCTGGGTTCGAATCCCGACCACTGGGGAATTAACATTTCGGCATCGCCAG

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

112

Start:

8714715  

End:

8714826

Strand:

+

>R1_SINE-tRNA_17

AATCGAGGCTTCTAGCTTAGGTGGTAAAGGGCTCACGGTTATGAGTTCCGCCATCTGGGTTCGGAACCCGACCACTGGAGGATTTACATGCGGTCCTCCAGCGCCCGAGACC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

183

Start:

9168230  

End:

9168412

Strand:

-

>R1_SINE-tRNA_18

TTTTTTTTGATTAATCAGGGGGTGATCCAAAGGCTTTTTAGGCCCAAGACTAATCCCTCTGAAGCCGACGGCAACCCATGTATTCTTGCGATTTAACGCTAGCTCCGATGGCAAAGCGGAATCGAACCCAGGGCGGAAGCTCCAGCCGGAGCCCCTTTACCACTAGGCCAAAACAACTTGGTT

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

237

Start:

10296862  

End:

10297098

Strand:

+

>R1_SINE-tRNA_19

GTTTCTACACCAGGAGGTCTGGATTTCAATTCCCGGAGAAGACGAATTATGCAGAATATTGGAGACAAATTTTACAAGGGATCTTCAGCATGGCGCAAGGAATACCGTCAGGAAAAGATCTCATAGGGCAGTTCATGGTGATGCAGTCAGACATGAATTCTCATAAGTCAGGTAGAATGGTCAGCTGTAATATCGTCTATGTAATATTTCTCTTTGTTTCTAATAGCATAATAAACC

Raphanus sativus (v1.0)

ID:

R1_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

222

Start:

10330831  

End:

10331052

Strand:

+

>R1_SINE-tRNA_20

AACCAACGCGTGTTGGCATAGTGGTAAAGGAACTTCGGCTGGAGTGTCCGTTCTGGGTTCGATTCGCGTTGGCCACGAGAGCTTTCACATGGGCTTCTTTCGCCTTCCAAACCACTTCGCGTAACCAGGGATCCTTAAGTGGAAGCTTAAAAATCCTGTAATGGCATGAGCTTAGACCCGATAGACTAGTCGATCACGTTTAGTGGTCGGATACTGGATTAT