TBGR-Browse-Rsa-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
R2_snRNA_1	Retrotransposons	Ret_other	snRNA	188	2510457	2510644	+
R2_snRNA_2	Retrotransposons	Ret_other	snRNA	185	36082773	36082957	+
R3_snRNA_3	Retrotransposons	Ret_other	snRNA	208	2357508	2357715	+
R3_snRNA_4	Retrotransposons	Ret_other	snRNA	181	2786891	2787071	+
R3_snRNA_5	Retrotransposons	Ret_other	snRNA	136	2788158	2788293	+
R4_snRNA_6	Retrotransposons	Ret_other	snRNA	186	5569328	5569513	+
R4_snRNA_7	Retrotransposons	Ret_other	snRNA	194	5654382	5654575	-
R4_snRNA_8	Retrotransposons	Ret_other	snRNA	164	11729942	11730105	-
R4_snRNA_9	Retrotransposons	Ret_other	snRNA	207	11732161	11732367	-
R4_snRNA_10	Retrotransposons	Ret_other	snRNA	169	11849550	11849718	-
R5_snRNA_11	Retrotransposons	Ret_other	snRNA	163	2010900	2011062	+
R5_snRNA_12	Retrotransposons	Ret_other	snRNA	163	2016120	2016282	+
R5_snRNA_13	Retrotransposons	Ret_other	snRNA	163	42700674	42700836	-
R5_snRNA_14	Retrotransposons	Ret_other	snRNA	163	44970511	44970673	-
R5_snRNA_15	Retrotransposons	Ret_other	snRNA	88	45009640	45009727	-
R6_snRNA_16	Retrotransposons	Ret_other	snRNA	178	1383496	1383673	-
R6_snRNA_17	Retrotransposons	Ret_other	snRNA	175	1635835	1636009	+
R6_snRNA_18	Retrotransposons	Ret_other	snRNA	82	15133005	15133086	-
R6_snRNA_19	Retrotransposons	Ret_other	snRNA	162	15143858	15144019	-
R6_snRNA_20	Retrotransposons	Ret_other	snRNA	89	15146142	15146230	-

Raphanus sativus (v1.0)

ID:

R2_snRNA_1

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

188

Start:

2510457

End:

2510644

Strand:

+

>R2_snRNA_1

GTAAAGTACTTACCTGGACGGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACCTCCATTGCACTTTACGGAGGGGTGCTTAGCTTAAGGTCTTTCCATGAGAAAGAGCCTACGTCATTATTTGTGGTAGAGGGGATCTGCGTTCGCGCGGTCCCTACCATCTTCAGTCTTAAATTT

Raphanus sativus (v1.0)

ID:

R2_snRNA_2

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

185

Start:

36082773

End:

36082957

Strand:

+

>R2_snRNA_2

TACTTACCTGGACGGGGTCGACTCTTGATCAAGAAGATGAGTGGCCTAAGCTAGTGACCTCCATTGCACATATTGGAGGGGTGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGTTGGGGCCTGCGTCCGCGCGGCCCCTACCAATTTTAATAGTTCAATTTTG

Raphanus sativus (v1.0)

ID:

R3_snRNA_3

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

208

Start:

2357508

End:

2357715

Strand:

+

>R3_snRNA_3

TGGAAACTCAATACAAAAGACACACTCGTGGCTTCTTGCAAATCACTTACCTGGACAGGGTCAACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACATAAAGGAAGGGTGCTTAGCCTAAGGTCTTCCCAAGTGGAAGAGCCTATGTCATTATTTGTGGCAGAGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Raphanus sativus (v1.0)

ID:

R3_snRNA_4

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

181

Start:

2786891

End:

2787071

Strand:

+

>R3_snRNA_4

ACTTACCTGGACGGGGTTAACTCATTATCAAAAATATGGGTGGCCTAGGCTAGTGATCTTTCTCCATTGCACAAATTAAAGGAGAGGATACAAGGAGAGGGCGCTTAGCCTAAGGTCTCCCCAAGTGGGAGAGTCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCTCTGTTCTT

Raphanus sativus (v1.0)

ID:

R3_snRNA_5

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

136

Start:

2788158

End:

2788293

Strand:

+

>R3_snRNA_5

GTGGCCTAGGCTAGTGACCTCCATTGCACTGAGGAGGGGCGCTTAGCTTAAGGTCTCCCCAAGTGGGAGAGCCTGCGTCATTATTTGTGGCAGAGGGAGCCTGCGTTCGCGCGGCTCCTACCATTCAATTTTAAAT

Raphanus sativus (v1.0)

ID:

R4_snRNA_6

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

186

Start:

5569328

End:

5569513

Strand:

+

>R4_snRNA_6

TATAAGAGAAGACCGAGGTCTTACAATAAAAAGTATTTACCTGGACTGGGTCAACTCTTGATCAAGAAGACCAGTGGCCTAACCTCCATTGCACATAAGGGAGGGGTGTTTAGCTTAAGGTCTCCCCAAGTGGGAGAACCTACGACATTATTTGTGGCAGTGGTGGTCTGCATTCGCGCTGCTCCT

Raphanus sativus (v1.0)

ID:

R4_snRNA_7

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

194

Start:

5654382

End:

5654575

Strand:

-

>R4_snRNA_7

CAAAATTTAAACTTTTGAAATTGGAAGAGGCCGCGCGAACGCAGGCCTCCACTGCCACAAATTATGACGCAAGCTCTTCCACTTGGGAAGACTTTAAGCTAAGCACCCTTCCTTAATGTGCAATGGAAGTCACTAGCTTAGGCCACTCTTCTTCTTGATCAAGAGTTGACCCCGTCCAGGTAAGTATCTTTCAA

Raphanus sativus (v1.0)

ID:

R4_snRNA_8

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

164

Start:

11729942

End:

11730105

Strand:

-

>R4_snRNA_8

TGGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACACAGGCTCTCCCACTTGGGGAGACCTTAGGCTAAGCGCCCCTCCTTAATGTGCAATGGAGGTCACTAGCCTAGGCCACTCATCTGCTTGATCATGAGTTGACCCTGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R4_snRNA_9

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

207

Start:

11732161

End:

11732367

Strand:

-

>R4_snRNA_9

TGGTAGGGGTCGCGCGAACGCAGACCCCCCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAGGCTAAGCACCCCTCCTTAATGTGCAATGGAGGTCACTAGCCTAGGCCACTCATCTTCTTGATCATGAGTTGACCCCGTCCAGGTAAGTGAATTGATCAATCACCCCACTTCTCATCTTATACTCTCCTTCCC

Raphanus sativus (v1.0)

ID:

R4_snRNA_10

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

169

Start:

11849550

End:

11849718

Strand:

-

>R4_snRNA_10

AAAGATGGTAGGGGTCGCGCGAACGCAGACCCCCTCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAGGCTAAGCGCCCCTCCTTAATGTGCAATGGAGGTCACTAGCCTAGGCCACTCATCTTCTTGATCATGAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R5_snRNA_11

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

2010900

End:

2011062

Strand:

+

>R5_snRNA_11

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACATACAGGAAGGGTGCTTAGCCTAAGGTCTTCCCAAGTGGAAGAGCCTACGTCATTATTTGTGGCAGGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Raphanus sativus (v1.0)

ID:

R5_snRNA_12

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

2016120

End:

2016282

Strand:

+

>R5_snRNA_12

ACTTACCTGGACGGGGTCGACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGCACATACCGGAAGGGTGCTTAGCCTAAGGTCTTCCCAAGCGGAAGAGCCTACGTCATTATTTGTGGCAGGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Raphanus sativus (v1.0)

ID:

R5_snRNA_13

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

42700674

End:

42700836

Strand:

-

>R5_snRNA_13

TTGGTGGGGGCTGCGCGGACGCAAACCCCCTCTACCACAAATAATGACGTAAGCTCTTCCACTTGGGAAGACTTTAAGCTAAGCGCCCTTCCTCAGTGCAATGGAAGCCACTAGCCTAGGCCACTCGTCTTCTTGATAACGAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R5_snRNA_14

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

163

Start:

44970511

End:

44970673

Strand:

-

>R5_snRNA_14

TTGGTGGGGGCTGCGCGGACGCAAACCCCCGCTGCCACAAATAATGACGTAAGCTCTTCCACTTGGGAAGACTTTAAGCTAAGCGCCCTTCCTCAGTGCAATGGAAGCCACTAGCCTAGGCCACTCGTCTTTTTGATCACGAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R5_snRNA_15

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

88

Start:

45009640

End:

45009727

Strand:

-

>R5_snRNA_15

ACAAATAGTGACGTAGGCTCTTCCACTTGGGAAGACCTTAGGCTAAGCACCCGTCCTAAGTGCATTGGAAGTCGCTCGGCTAGGCTAC

Raphanus sativus (v1.0)

ID:

R6_snRNA_16

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

178

Start:

1383496

End:

1383673

Strand:

-

>R6_snRNA_16

TAAGAAAATGGTAGGGGCTGCGCGAACGCAAACCCCCCTGCCACAAATAATGACGTAAGCTCTTCCACTTGGGAAGACTTTAGGCTAAGCACCCTTCCTTAGTGCAATGGAAGTCACTAGCCTAGGCCACTCGTCTTCTTGATCACGAGTTGACCCCGTCCAGGTAAGTGATTTGTAA

Raphanus sativus (v1.0)

ID:

R6_snRNA_17

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

175

Start:

1635835

End:

1636009

Strand:

+

>R6_snRNA_17

GGTACTCGCAAATCACTTACCTGGACGGGGTCTACTCGTGATCAAGAAGACGAGTGGCCTAGGCTAGTGACTTCCATTGTACTAAGGAAGGGTGCTTAGCCTAAAGTCTTCCCAAGTGGAAGAGCTTACGTCATTATTTGTGGCAGGGGGGTTTGCGTTCGCGCAGCCCCTACCA

Raphanus sativus (v1.0)

ID:

R6_snRNA_18

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

82

Start:

15133005

End:

15133086

Strand:

-

>R6_snRNA_18

AGCGCCCCTCCTTAGTGCAATGGAGGTCACTAGCCTAAGCCACTCGTCTTCTTGATCACGAGTTGGCCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R6_snRNA_19

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

162

Start:

15143858

End:

15144019

Strand:

-

>R6_snRNA_19

TGGTAGGAGCCGCGCGGACGCAGGCTCCCTCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAAGCTAAGCACCCCTCCTTAGTGCAATGGAGGTCACTAGCCTAGGCCACTCGCCTTCTTGATTACAAGTTGACCCCGTCCAGGTAAGT

Raphanus sativus (v1.0)

ID:

R6_snRNA_20

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

snRNA

Length:

89

Start:

15146142

End:

15146230

Strand:

-

>R6_snRNA_20

AAGAATGGATGGTAGGAGCCGCGCGAACGCAGGCTCCCTCTGCCACAAATAATGACGCAGGCTCTCCCACTTGGGGAGACCTTAGGCTA