Raphanus sativus (v1.0)
ID:
R1_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
135Start:
2252927End:
2253061Strand:
->R1_LTR-Ngaro_1
TGCTGTTGAATCCGCTGCTGCTGAAGCTGAAGCTGAAGCTGATAAAGTTGCTGCTGCTGCTGCTGCTGATACTGAAACTGCTGCTGTTGTTGTTTCTGTGAATGGATCTGGAGCTGCTGAAACTGTTGTGCAGCT
Raphanus sativus (v1.0)
ID:
R1_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
84Start:
7891318End:
7891401Strand:
->R1_LTR-Ngaro_2
TTGCTGCTGCTGATGATGATGATGTTGCTGCAGCTGTTGATGTGACATCTGTACTTGTTGCTGCAGCTGTTGTTGTTGTTGTTG
Raphanus sativus (v1.0)
ID:
R1_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
214Start:
11581901End:
11582114Strand:
+>R1_LTR-Ngaro_3
CAGCAACAGCAGCAACTCCAACAACAACAGATCCAGCAGCAACAACATCAACAGCAGCAGCAGCAACAGATCCAGCAGCAGCAACACCACCAACAGCAACAGCAACAGCTGCCACAACTCCAGCAGCAGCATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAACACCAGTTGTCACAGCTTCAACATCATCACCAGCAGCAGCAGCAGC
Raphanus sativus (v1.0)
ID:
R2_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
150Start:
9060585End:
9060734Strand:
+>R2_LTR-Ngaro_4
AGGTGCTACTAGGCGCAACTAGATACTAGGTACTACTAGGAGCTACTAGGCGCTACTAGATGCTACTAGTCACTAGATTCCACTAGGTTCCACTAGGTGTCACTAGGAGCTACTAGGTGCCACTAGGTGTTAGTGGCCACTACCTACTAC
Raphanus sativus (v1.0)
ID:
R2_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
95Start:
11237943End:
11238037Strand:
+>R2_LTR-Ngaro_5
CTTCTACTACAACAGCAACTTCTACAGTTTCTGCCTCTACTCCTTCTGCTACAACTACTGCTGCTGCTGCTACTGTTGCAGCTACCATACAGTTA
Raphanus sativus (v1.0)
ID:
R2_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
255Start:
40633295End:
40633549Strand:
+>R2_LTR-Ngaro_6
CAGCAAATGCAACAATCTCAACACCCACAGGTCTCCCAGCAGCATCAACAACAACAACAGCAAATACAAATGCAACAACTCTTGTTACAGCGTGCACAACAACAGCAGCAACAGCAGCAACAGCAGCAACAACAACAGCAACATCATCAACAGCAGCAGCAACACCAACAACAGCATCAAAACCAACCACCTTCTCAACAGCAGCAGGCAGCGCCTCAACACCAACAACAGCCAACAGCACAGCAGCAGCAACAG
Raphanus sativus (v1.0)
ID:
R4_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
94Start:
7321539End:
7321632Strand:
->R4_LTR-Ngaro_7
TAGTAGTAGTAGTAGTAGTAGTAAGTAAGTAGTAGTAGTAGTACGTAGTAGAACGTAAGTAGTAGTACGTACGTACGTACGTAGTAGTAGTAAC
Raphanus sativus (v1.0)
ID:
R5_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
224Start:
9246294End:
9246517Strand:
->R5_LTR-Ngaro_8
TGTTTTTGTTGTTGTTGTTATTATTATTCCCATTGTTGTTGTTGTTGTTGTCATTGTTATTCCCCTTGTTGTTATTACCATTGTTGCCATCATTGTTGTTGTTATTGCCATTGCTTTTGTTACCATTATTTCCATCGCTGTTGTTATTACCATTGTTGCCATCGCCGTTGTTGTTACCATTGTTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTATTGCTT
Raphanus sativus (v1.0)
ID:
R5_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
93Start:
39855011End:
39855103Strand:
+>R5_LTR-Ngaro_9
CAGCAGCAGACACAACAGCAGTTTCAACAACAGCCACAACAGCAGTTGCAGCCAAGACAGCAGCCACATCCACAGCAGCATCAGCACCAGCGG
Raphanus sativus (v1.0)
ID:
R5_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
260Start:
41421223End:
41421482Strand:
+>R5_LTR-Ngaro_10
CACCTCCTTCTTCTGACTCGCAACCTCCACCGTCTCCACAACAAGGAAACAATAACAGCAGCAACAACAACAATGGTGGGAACAATGACAATAACAACAACAACAACAACAATGGTGGGAACAATGACAACAACAACAACAACAATGGTGGAAACAATGACAACAACAACGGTAATAACAACAATAATGGCAACAATGGTAATAACAGCAATAATGGCAACAATGACGGCAACAATGGGAATAATAACAACGGAAACAAC
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
249Start:
7285290End:
7285538Strand:
->R6_LTR-Ngaro_11
TATTATTGTTGCTTCCTCCACCATTGTTGTTATTATTCCCATTGTTGCCATCATTGTTGTTGTTGTTATTCCCATTGTTGTTGTTGTTGTTGCCATTATTGTTGTTATTATTACCATTGTTGCTTCCTCCACCATTGTTATTGTTGTTGTCATTGTTTCCACCATTGTTGTTGTTGTTGTTGTCATTGTTTCCACCATTGTTGCCTTGTGGTGGAGATGGTGGAGATTGTGAGTCTGAAGAAGGTGGTG
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
87Start:
14494055End:
14494141Strand:
->R6_LTR-Ngaro_12
TAGTAGTAGTAGTAGTAGTAGAGAGAGTAGTAGAAGAGTAGTAGAGTAGTAGTAGTAGTAGAGTAGTAGTAGTAGTAGTAGTAGTAG
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
97Start:
31736864End:
31736960Strand:
+>R6_LTR-Ngaro_13
GCTTCTGCAGCATACTGCTTCTACAGCATATTGCTACTGCTTCTACAGCATGCTGCTACTGCTTCTACAGCATACTGCTACTGATTCTTCATCAGCT
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
83Start:
32003103End:
32003185Strand:
+>R6_LTR-Ngaro_14
CTACTTTCACTGCTATCGCTACTACTACTATTACTTCTGCTGCTTCTACAACTACTCATGCTGCTTTCGCTAAACAGACTGCT
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
151Start:
46352403End:
46352553Strand:
+>R6_LTR-Ngaro_15
ACAACAGCTCCAGCAGTTGCAGCTTCATTCACAGAAACAACAACAGCATCAACATCAACAACAACAACAACAGCAGCAGCAGCAGTTTCAGTTTCAACAGCAACAAATACAACAGCTTATGCATCAACGTCTTCGACAGCAGGAACAACAA
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
145Start:
46358820End:
46358964Strand:
+>R6_LTR-Ngaro_16
ACAACAGCTCCAGCAGTTGCAGCTTCATTCACAGAAACAACAACAGCATCAACATCAACAACAACAACAACAGCAGCAGTTTCAGTTTCAACAGCAACAGATACAACAGCTTATGCATCACCGTCTTCGACAGCAGGAACAACAA
Raphanus sativus (v1.0)
ID:
R6_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
121Start:
50299349End:
50299469Strand:
->R6_LTR-Ngaro_17
GTCGTAGTAGCAGTAGTTGATGCTGCCTGGGGTACAGCAAAAGTAGTAGTTGCAGCAGCAGAAGTAGAGGTGGTAAAACCAAATGCTGGAGCAGGGGAAGTAGCCGTAGTAGTGTTGGCTG
Raphanus sativus (v1.0)
ID:
R7_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
341Start:
2254291End:
2254631Strand:
+>R7_LTR-Ngaro_18
CAACAGCAGCAGCTGCAGCAATTGTTGCACTCCTCTTTGAACCATCAGCAACAGCAATCACAGCCTCAACAACCACAGTCGTTGCAGCAACAACAACAACAACAATCACTGCAGCAGCAACAACAATCACTACTGCAGCAGCAGCAGCAACAACAACAATCGCTGCAGCAACATCATCAACAACCGCTACAGCAACAGACTCAGCAGCAGCAGCTGCAGCAACAGAATCAGCAGCAGCAAATACAACAACAGCAGCAGTTAAGATCGCAGCAACTGCAATCTCAGCCCCAGTCACATCCTCAACATATGTTGCAGCAATTTCAGATTCCGCAGAATCAGCT
Raphanus sativus (v1.0)
ID:
R8_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
218Start:
5920010End:
5920227Strand:
+>R8_LTR-Ngaro_19
AACAACAGCACCAACAACAGATCCAGCAGCAGCAGCAACAACAAATCCATCAGCAGCAGCAGCAACAACAGCAACAGATCCAGCAACAACAACACCACCAACAGCAACAACTGCCACAACTCCAGCAGCAGCAGCACCATCAATTGTCACAACTCCAACATCATCAGCAACAGCAGCATCAGATGTCTCAGCTTCAACAACATCATCAGCAGCAGCAG
Raphanus sativus (v1.0)
ID:
R8_LTR-Ngaro_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
103Start:
20936419End:
20936521Strand:
->R8_LTR-Ngaro_20
CCTATAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCGAGTGAGCTTGTAGCTAGTGAGCTTGTATTGAGCG