Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
130Start:
33365End:
33494Strand:
->R1_LTR-Gypsy_1
ACGGGTATATGTATACGAACCCACTGCCCACTTTTTAGAGAGGAGGATAGCTGAACTCGTCTTTTGACAACTACCTACGTACCCCTTTCGAAGATCAAGCCATCTCGTAGTTCAGTTGGTTGCCGCGTAT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
400Start:
34073End:
34472Strand:
->R1_LTR-Gypsy_2
CGCAGCGGCTCGTCCTCCCTTTGAGTCAAGCTCCAAAGGTTGACATCAGAGGTTTCTCTGTTCATGAATATGGAGTGCTGCTTGAGAAACTCGGGTGCGAGTTGTCGAAAGCTTCCATTGCATTTCAAGCAGAGAAAACCATTCGAGTGCAGCTTCCTGTAGTTTTTCGACGAAGAGGAGGCAGTATCCAGCATCTCGTTCGCGCTCCCTAATTTTTCACCTCCCCATCGCAATCTGGAAATATTATAGATGCACTTTTGGGTCCATGATGCCATTGTACACGGGAATTTTGATCTTCCCATGATCTGAGACTGTTTTTCGCGCTTCCTCGAGAAGTCTGTCGATCTCGGGAGAGGTGCTTGTTGCGTGGTGAATTTGCTATTTTATCGCTTTCACCTCT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
270Start:
36501End:
36770Strand:
->R1_LTR-Gypsy_3
TGATGTAGCTCAAATTACCGTAGAAAACTATCTCAAATAAGAGATAGATTATAGTATTTAGTGATCAAATCTGCATGGAGCGTGGATTAAATAATAAACTATAAATATTAAGATTAATCTAGGCAAACTATATTAAAAGTAGTAATAATAGGAATAAAGTAGGTTGTAAGATATGTGGGAAAAGCTACATTTAAGGTTTTAAACGAGTTATCAGAACTTAAATCTATAAATGCATAAGGTTTAATAAGAACCATCCTAGAATTCGAATTA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
99Start:
470821End:
470919Strand:
->R1_LTR-Gypsy_4
TAACTAGGATAATCACAAAGATCTTATTTAGTCTAAGAATGCCTAAGATCAATGTCTTCTTAAATTCGTTGAGATCACCAATGATCTACCGAAAACAAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
102Start:
1890329End:
1890430Strand:
+>R1_LTR-Gypsy_5
TGTTGTACTCTTTTTCATGTCCATGGTTTCCCATTTTGCCACATTGGTTTTGGGGTTTTCCAGGAGAGGTTTTAATGAGGCAACATTAAGCATGCAACGAAC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
94Start:
2832053End:
2832146Strand:
->R1_LTR-Gypsy_6
AGTTGCGGAAGAGCTCCTGATTTACCCTATAACAATCTCCCTTGGATATGACACACCAAATTTGATTGAGTTAGATTGAAGGATATTACACACC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
120Start:
3375366End:
3375485Strand:
+>R1_LTR-Gypsy_7
TATGTTTTCTAATTGGTTTTCAAGTCTTTATCGAGTCTTTCTAGTCCTTTTCGAGTCATTACAGGTCTGGAGTTGCACTGGATGGGAGATGGACCTGCTGGAACAAAAGAAGCAGAAAAC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
273Start:
4634409End:
4634681Strand:
+>R1_LTR-Gypsy_8
TTGAGGTTGCTGAGAATCCATTCGTTGAGCTGCTAAGGTTGCGAGAAACTAACGGAGTCGTGGAATATCATGAGAGATTTGAGATGCTTAGATCCAAGACTAGCTTATCTGAGGAGTATATGGTTAGGCCATTTTTGGATGGATTGAAGATGGATACTCAAGCATATGTCAGAAGGTTTCAACCTCAGTCCATTCGCCAGTGTTTGATTTTGAGAAAAATGTATGAGAAAGTTCAGCACAAGACTTCTACCAGTGAATCACGTCCAGCAGCAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
271Start:
5069266End:
5069536Strand:
+>R1_LTR-Gypsy_9
GCAACGGAGTGTGTAGCGATTCCAATCTTCACAGGCGATGACTTGCGATCATGGATTTTTGGGTTGGAGGAGTTCTTTGTGCGGGAGGATTTCACAGAGGACGATGACAAACTTAATTTTGCTCAGAGTTTCATGGATGGTGAAGCTGTATCTTGGTTTCAATGGCGACAATCATTGTGGTTGTTTAACAGTTGGGAATCACTGAAGAAATCCTTGTGGTTACGGTTTGGAAGTGATGAAGATTCGGAGATGATAAAGTACAATACAGAAA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
3198Start:
6071624End:
6074821Strand:
+>R1_LTR-Gypsy_10
AAAAATCTCGTGTAGGATTGGTTTCGGTTGGAGGTGAGCCCGCTCACACCTTATTTGACACGGGAGCTTCTCACAGTTTTGTGACTCCGCGCTTTGCTAAGTGTTGGTCTTTTCGAGGAGTCTTCGTGCAGAAGGCTAAGCAGATTCAGACTGCCGGTTCAGAGAAGTTGGGAACAATCGGTATTCATCACGACGTACCAGTTACACTTGGAGGAGTTGAGTTTCTCGGAGACTTGACAGAGATGGAGCTGAGTTTCTACGATGTCATACTTGGGATGGATTGGCTATCACGACATAGAGTTGTATTGGATTGTCCGGATGCAAGAGTTAATATCCCTAGAGCTGAAGGGAAGATCGTTTTCCAGGGGACTCGGGCACACCAGGGAATTTCTATTGTCTCCATGTTGCGTGCAGAGGAATTGTTGGAGAATGGAGCAGAGGGATTTTTAGCGACCATTTCGATGGACAAGGATGATGATCAGCTCGAGCTACAAGATATTCCAGTGGTTGCCGAGTATGCAGATGTTTTTGAGGCTTTAAAGGGGCCACCACCAGCTAGAAGTGATGTTCTTGCAATTGAGGTGGAACCAGGGGCAGCACCAGTTTCACGAGCTCCTTACCGTTTAGCTCCCGCAGAGATGGCTGAGTTGAAGAAGCAGTTGGAGGAACTATTAGATAAAGGTTTTATCAGGCCGAGCACTTCACCGTGGGGAGCACCAGTTTTGTTTGTGAAGAAGAAAGATGGAAGTTTCAGACTTTGTATCGACTACCGAGGTTTGAACAAAGTCACCATCAAGAATAGGTATCCGCTTCCGCGTATCGACGAGTTGTTGGACCAGTTGCAAGGAGCTTCATGGTTTTCTAAGATTGATCTAGCATCAGGATACCATCAGATTGCCATAGCAGAGGGAGATGTACGGAAGACGGCCTTTCGTACACGCTACGGACATTATGAGTTTGTGGTGATGCCATTTGGGTTGACGAACGCACCAGCAGCATTCATGAAGCTAATGAATGATGTATTCCGTGAGCATTTGGATAAGTGTGTGATCGTTTTCATCGACGATGTCTTGGTTTATTCTCGGAGTAGAGAAGAGCATGCTGAGCATTTACGGATTGTGTTGGAGAAGCTTAGAGAGCATCAGTTGTTTGCTAAGTTGAGTAAGTGCAGCTTCTGGCAGAGGAAGATCGGATTTCTCGGTCATGTAGTTTCAGAAGAAGGAGTTGCGGTAGATCCAGAAAAGATTAAAGCAATTTCAGAGTGGCCGACACCTAAGAGTGCGACGGAGATCCGCAGTTTTCTCGGTTTGGCAGGATACTACAGGAATTTCGTCAAGAGTTTTGCTAGCATTGCAAAGCCAATGACAAAGTTAACGGGCAAGGACGTCAAGTTCGATTGGACAGATGGGTGCTCGGAGAGCTTTGCTGAGTTGAAGCGACAACTGACTCAGACACCAGTTTTGGTACTCCCGAGGCCAGGGATACCATATGAGGTTTACACTGATGCATCAGGCACTGGATTGGGATGTGTATTGATGCAGGAGGGCAAGGTCATCGCATATGCATCACGACAGTTGAGGCCTCACGAGGCTAATTATCCTACGCACGATTTGGAGTTAGCGGCAGTTGTCTTTGCGTTGAAGATTTGGAGGTCGTATTTGTATGGAGAGAAGGTGAAGATCTTCACTGACCATAAGAGTCTGAAGTACATTTTTACTCAGACGGATTTGAACTTAAGACAGCGTAGATGGGTGGAGTTGTTAGCAGACTACAACTTGGAGATTGCTTATCATCCGGGAAAAGCTAATCAAGTGGCAGATGCCTTGAGTAGGCGCAGGAGCGATGTTTCACGAACTAAGGAGGTCCAGGAGTGTATGGGAACACTTGCTAGTCTCAGATTATGCGCCACTACGGTAGACGGAGAGACAGTTGGCCTCGAGGCGGTAGATCAGGCAGATTTACTATGGAGGATACGTAAAGCTCAGGATGTCGATAAGGCTTTGTGTAAGCAGATTGAGATCGAGAGTATTGGATATCACACAGCGTCGAGCGGGATGTTCATGTACCGGAACCGAGTTTGTGTACCCAGTGATGAGCTGTTAAGAAAGGAAATCCTACAGCAAGCACATCACTCTCGTTTTTCTATTCATCCGGGGAACACCAAGATGTACCGGGATCTGAAGCGTTACTACCATTGGCCTGGTATGAAGAGGGATGTTGCTACATTTGTATCGCAGTGTCAGACCTGTCAGATGGTTAAGGCTGAGCACCAGGTTCCTAGTGGGTTATTGCAAAACCTGCCATTGCCGGAGTGGAAATGGGATATGGTGACTATGGATTTTGTATTGGGGTTACCGACTACATCAGGAGGGAAGAATGCCATATGGGTAATTGTGGACAGACTTACCAAGTCAGCCCATTTCTTAGCGATTAAGACGACCGACGGAGCAAGTCAGTTGGCGCAGATTTACATCGATGAGATTGTGAGATTGCATGGAGTTCCCGTGAGCATTGTATCGGATCGAGACGTAAAGTTTTCATCTATATTCTGGAAAGCCTTTCAGAAGGCACTTGGGACAAAGGTCCATATGAGCACAGCTTACCATCCGCAGACCGACGGTCAGTCAGAGAGGACTATTCAGACCTTAGAGGATATGTTGAGAGCTTGCGTTTTGGATTGGAAAGGAAGTTGGACAAAGTATTTGCCTTTAGCAGAGTTTGCCTACAACAACAGTTATCACTCGAGCATTAAGATGGCACCGTATGAGGCTCTTTACGGTAGGCCTTGCCGCACACCGCTTTGTTGGACAGAAGTGGGGGAACGACGTGAGATTGAACCTGCTATGGTTCAAGAGACGGTAGAGCAGGTTGAGATGCTCAAGGCTCGGCTTAAGGAAGCCCATGACCGTCAGAAGAGTTACGCAGATAAGCGGCGTAAAGATTTGGAGTTCCAGGTTGGCGACCTGGTATACCTGAAAATGAGAACATTTCAGGGAGGATCTAAGACTCGGAAGCTGAAGAAGCTTAAACCGAGATACATGGGACCATATCCTATTTTGGAGCGGATTGGAGCAGTTGCTTACAAATTGGATTTATCGGCAGAGTTATCTGACTTCCACGATGTGTTTCACGTTTCCGTTTTGAGGAAAGTTGTTAGAGAGCCAGAGCTCATTTTGCAGCAGCCACCAAGTGATCTTG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
3600Start:
6580437End:
6584036Strand:
->R1_LTR-Gypsy_11
CTCCCGTTTTGAGAAACCTTGACTTCAAGGTTTAAAAGCAGGGAACCTCCTCTCTAGTTCAAACAAGAACTCCCAAGTAGCTTCATCCTCCGGTTGATTACGCCACTTAATCAGAACCTTCGTCACTGCTCTACCCTGACGCTTCACCATCTTCCTCGCAAGAATAAGCTCCGGTTCCTTGATCAACACGTCAGACACCACTGAAGGAAGAACCGTAGATGTCTCCACATTACCCACTGCTTCCTTAAGCTGAGACACATTGAATACCGGGTGAACTTGAGAACCCGTTGGCAACTCCAACTTATACGCAACACTACCACATTTGTTGACAATCTTGTAAGGCCCAAAATACTTAGGAGAAAGCTTCTGATTGGAGCGAACCACCACATAACGTTGACGATATGGTTGAAGCTTCACATAAACATAATCGCCCAACTCGAAGCTTCTATATGTTCTGTGTTGATCTGCAAACTGCTTCATCCTGTGTTGAGCTCGTGACAAATGAAACTTAAGCATCAGCAACATGTCTTCTCTGTCACGTAAACACTGATCCACCACTGCAACTTTCGACTCGCCTGGTAAGTACGGTAGATGCTGAGGCGGAGGACGACCATAGACCGCTTCAAACGGTGTAGTTTGAATCGTAGAGTGGAAGTTTGTGTTGTACCAATACTCCGCAAGTGGTAGCCACTTACTCCATAACTTCGGCCTGTCACTACACATACAACACAAATAAGTTTCCACTCCTCTGTTTACAACTTCTGTCTGTCCATCGCTCTGAGGGTGATAGGCACTTGACATGTTCAAAGCCACTCCTTGCAAGCTGAACAACTCCTTCCAGAAGTCACTCAAGAAGATAACATCACGGTCACTAACAATCGACTGAGGAAACCCGTGGAGTTTGAAAACATTGTCTAAGAACGCATGAGCGACAGAGGAAGCAGTGTAGGGATGAGACAATGCCACAAAATGAGCAGCTTTGCTCAACCTATCAACCACCACCAAAATGACTGATTTCCCACAAGACAATGGAAGCCCATCGATGAAGTCCATCGAAATATCAGACCAAATAGACTCTGGAATGGGTAATGGTTCCAAAAGCCCTGGGTAAGCTGTTGTATCGTATTTGCACTGTTGACAAACACTGCAGCTTCTGATGTATTGTTGGATGTCTTTCATCATGCCCTTCCAATAAAATATGCCCTTGACTCGCTGATGAGTGACATCTCTTCCCGAATGACCACCAATGCCTGAACAATGAAGCCATTGGAGAATCTTATCTCTGATCTCCACAACATTTGGAACCACGATTTTGCTCTTCCTTCTTAACACCTCCTGAGACCACGAGTAATGCTTCTTTGACAGCGCTTTAACCTTCAACTCTTCAATTATAGCTTTCACATTACTGTCCAATTCATAGGCTTGTTTAATCTGCTGCATCAAATCACACTCAAGCACTGACATAGCCATATGTAAAACTTCTGATCCCTCGACTCGAGATAAGGCATCTGCTACTACATTTTCCTTGCCTTGTCTGTATTGTATCTCGTAGTCGAACTCCAACAATTTTGGTAACCACTGTTGCTGAATTGGTGTATTCAATCGCTGTTCCAGTAGGTACTTCAAACTCTTTTGATCGGTCTTGATAATGAAATGATTCGGAAGCAAATAGTGGTGCCACTTCTGCACTGGAAACACCACTGCTAAGAGTTCCTTCTCATAGATAGAAAGATGAAGTTGCTTCCCTTTCAAGTGCCGACTTATGTAAGCTATGGGATGTCCCTCCTGCATCAACACTGCCCCAATGCCATGTCCACATGCATCAGTCTCTACAATAAAGGTTTTGTCGAACTGAGGTAAAGCCAAAACCGGTGCCTCACACAAAGCTTTCTTCAATATACCAAAAGCAGTTTCAGCTTCTACAGACCACTCAAAACAATTCTTCTTTGTTAAAGCCGTGAGAGGAAAAGCAATAGGACCAAAACGCCACACAAAACGTCTGTAGTAACCAGCAAGCCCCAAGAATCCTCTCAATGCCTTTAATGATGATGGAATAGGCCATTCGACAATTGCTCTTATCTTCTGTGGATCGGTTGAAACACCCTCCTTTTGAATAAAATGACCCAAATATTCCACCCGATCAGTAGCAAAAGAACATTTGCTGCGTTTTGCAAATAATTGATTGAGCCTCATCAACTCATACACACTCGCCAAATGTTCCATATGTTCTTCGACTGAAGAGCTGTACACCAATATATCATCAAAGAAGATCAGAACACACTTCCTCAACAACTCACTGAACACTGTATTCATTAGACTCTGAAATGTAGCAGGTGTGTTGGTTAACCCAAAGGGCATAACCAAATACTCGAAGTGGCCAGTATGGGTCTTGAACGCTGTTTTATGAATATCAGCAGGGTCCATTCGCACCTGATGATACCCAGCCCTGAGGTCTATCTTTGAAAACACGCAAGCACCTCCCAACTCATCTAAGAGATCCTCAATCAACGGAATAGGAAATCGGTCTTTAACTGTCATGTTGTTAAGGCCTCTGTAATCAACACACAACCTCAAACTTCCATCCTTCTTCTTAACCAAGACTACAGGTGATGCATAAGAGCTACAGCTCGCCTGAATCGTACCTGCCTTCAATAACTCCTTTACCATTTTATCAATCTCATCCTTCTGGTGTAAAGCATAACGGTATGGTCTCTGGTTAACCGGATTAGAGCCCTCCAAAAGTGGAATTTTGTGGTTATGATTCTCTCGAAATGGTGGTAAGGCTGTAGGTTCTTCGAAGATATCAGCATAAGAGTGAATCAACTCAGTAATAGGCCGAGAGTGCTTCTCAACTTCACCACCCTCTAAAGCACACAAACTCTCCTGTACTGTTATTTCTTCAGTCTGAACTGTGAGCATCGAGATTTGTACAACGTCATCATCCTCCAAATTCATCTTCTTTGCCCTCACTTCTCGGATAGACCCCTCCTTAAGTCCATGTAGTAACACAAACTTAGGACCTCTCCTGAACTTCATCGTTAACTCTTGGAAATCCCAAGTAATAGGACCCCATTGTTCCAACCACTGGACTCCCAATACCATATCACAACCTCCCAAAGGAATAACCATGAAGTCAGCTGCGAAAGAGTTGTGTTGAAAGTTCCATGAAAAGTTGTTGATTTTAGCACTCACACCCAGCTTACGGCCATCAGCAACCGCTACTCTTGCAGAACTCGCTGGCAGTAACTCACACCCCAATTTTGTTGCTGTTTTCTCGTCAATGAAGTTGTGAGTTGAACATGAGTCAATGAGCACAAATAAGGTTCTCTTGCCAGCTAATCCTTTTACTCGCATAGTACGATACTGAGGTACCAGTGACTGCATTCACAGAAATCTGAGCTACTTCTTCATGATTCTGCTCTTCAATCATCTCCTGTTCCTCAGGCGTCAGTTCTTCTTCCTCTTCCACCTCCATTACAAACAATTGCGTCTTTTTGTGCTTCAAAAAGTGACCAGGTGTGTACTTCTCATCACAAAAATAACACAGACCAGCAGCTCTACGTTTGCTCATTTCCTCATGCGTAAGGAACTTCCGAGGTT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
502Start:
6584162End:
6584663Strand:
->R1_LTR-Gypsy_12
TTCTTTGGATGAGCCTTCTCATACAATCGTCCCAACATCAGACATTGGCGAACTGACACTGGCTGAAACATACGAATATGCATCTGAGTGTCAAGGCGTAATCCTGCCAAATAAGCGCTGACGAGATAGTGCTCAGGAAGGTTGACTCGAGTACGAATCAGCTCAAATCTCCCATGATACTCAACTATACCATTAGTCTCCTGCAACTGCTTCAACTCTGCAAAAGGATCATCCAACAACTCTTCAAAACGTTCAGTCAACAACATCAAATACGTTGGCCAATTCTGTAACAAGTTTCGATGAGTCTCAGATTGTAGTACAGCGTGATGCCAAGTAGCGGCAAGGCCATCAAAGTGCATCGACGCTATACCAACTTTCAACTCCATAGGTGTTTGATCCATGTAAAAGAACTGCTCCACCTTACATAACCAATCCTTCATCCCTTCACCATTGAAACGAGGGAAATCAAGTTTCGTCAAACGCGTCATACCAGAGTAGTGAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
2834Start:
6592680End:
6595513Strand:
->R1_LTR-Gypsy_13
AACCTTGTCCTCAAGGATTGAAGAGAGGAAACTTGGTGGCGAAGTCATGATAGAACTCCCAAGTGGCTGTATCAGGTGACTCTCCTTTCCACTGCACGAGTACTTTAGTAGCTGCAGCATTACGTCGCTTGACCGTTTTGGTTTCCAGGATTGCTTCCGGTTCTTTGGCATTGCCAAGATCAAGCCAGTACTGGGGGACAGCAGGCGTGGAGGTAGCAGATGGATTAGGGCAGAGCTTAAGTTGGCTCACGTGGAAGGTATCGTGAATGGCGGCTTCAGGGGGAAGTTGTAGCTTGTAAGCAACAGTTCCCACACGGTCAATGACTTTGAAGGGACCGTAGAAGCGGGGTGACAGCTTATGAGGTGTTTTTCTGTTCTTCAGGCTGTGTTGACGGTAAGGCTGAAGCTTCAGATACACGAAGTCTCCCACTTTGAATTCACGGTGAGAGCGGTGTTTATCAGCGTACTGGCGCATGCGGTTCTGAGCGCGAAGGAGGTGAAATTTTAACATGTTGATCACCTCTTCACGTTTTTGTAGACTGCGATCAACAACAGAGCAGGAACTTTCACCCGGGAGATAAGGCAAGTGAAGTGGAGGGGCTTGTCCGTAGATGATTTCATACGGTGTTGCTTGAATCGCTGAATGGAAAGTAGTGTTATACCACCATTCTGCTAAGCTCAGCCATTTACTCCAGGAGGAGGGGGTTTCAGCGATCATGCAGCGTAGATAAGTCTCCAGAGTTTTATTTGTGATCTCCGTTTGGCCATCGGTTTGAGGGTGGTAAGCTGTTGACCGCTTGAGATCTACGCCATGAACTCTGAATAGTTCCTTCCAAACTTCGCTGATAAAAGTGGGATCACGGTCGCTTATGAGGTCTTTTGGCATCCCATGAAGTTTGAAGATGTTATCCAAATAGGCTTGAGCGACCGAGATAGCAGTATAAGGGTGTGAGATGCCGATGAAGTGAGCGTTCTTGCTCAGTCTGTCAATGACCACCAGTATACAATTTTTGCCGTTGGAAGGAGGGAGACCTTCGATAAAATCCAGACTGACTGATTCCCAGACGCCAGCAGGTATAGGGAGGGGTTGGAGTAATCCGGGTTTAGCAGCCAAGTCAAACTTGTTTTGTTGGCAAATGGCGCAGTTGCGGATGTAGTGCTGGACCTCAACGTTCATCTTAGGCCAGTAAAACAGTGACTTGATCCTGTGTAGAGTTGCGTCTCTACCAGAATGGCCCCCCACAGCGGAGTCATGAAGCCACTGCAAGATGTGCAGCTTGACAGCTTTGTCGTTGCCAACAACCAGTTTACCTCTGCGGCGAAGTTCTCCATTGATGAAAGTGAACTGAGGGTGAGAGGACTTGTCCTTCTCCAGATCGGTGATGATCTTTTGAAGATGAGAGTCAGTCTCCCATAGCAGCTTCAGGGAGTCGTAAAACCCAGTGTGAGCTTCAGACAGAACCAGATGCAGCAGCTGAGAACCCGTTACTCTGGAGAGAGCATCTGCGACAGTGTTGTCCTTCCCCTGCTTGTAGCGTATTTCAAAGTTGTATCCCATCAGCTTAGAGAGCCACATATGCTGGAAAGGGGTGTTGATCTTCTGCTCTAAGAGGTATTTAAGGCTCTTCTGATCAGTGTTGATGATGAAGGGTCTATGGGCTAGATAGGCATGCCAAGTTTGAACGGCATGAACCAGAGCTAACAGTTCCTTTTCGTAGACTGATAACGCCTGATGTTTGGGACCGAGGGAGCGGCTAATGAAGCAAATTGGGTGGTTGTTTTGCATAAGCACAGCACCGATACCATTGTTAGAGGCATCAGTCTCCACAACAAAAGGTTGATCGAAGTTGGGGAGCGCTAAAACTGGCGTTGAGCAGAGAGCAGTCTTAAGGTTGATGAAAGAAATGTTGGCGTCGTCAGACCAAGTGAAGCCGTCCTTCTTAAGGAGTTGGCTAAGAGGGCGAGAGATGGAGCTATAGGCCATTATGAAACGTCGATAGTAATTTGCCAATCCCAAGAAGCTCCGAAGGTGCTTCTGTGTCGTAGGGATTGGCCAGTTACTGATGACGTCGATCTTCTTCGGATCAGTGCTGACACCGTCTGCAGAGATGAAATGACCGAGGTATTCTATCAGTGTAGCTCCAAATGTACATTTAGAAAGCTTGAGATAGAGTTGTTGTGCTCGTAGGATGGAGAAGACTTCAGTAAGGTGAGCGAGATGGTCCTCCCATGTATTGCTGTAGACAAGAATGTCGTCAAAGAAGACAAGGACAAACTTGCGAGAGATGTCACGGAAGACATGATTCATCAAGCTCTGAAACGTGCAGGGAGCGTTGGTGAGGCCGAATGGCATGACAAGGTACTCATAGTGGCCGTTGTGGGTCTTAAAGGCAGTCTTGTAGATATCCTCTTCAGACATTCTGAGTTGGTGAAAGCCAGCCCTTAAGTCCAACTTCGAGAAGTAATGAGCACCGCCAAGTTCATCAAGGAGGTCTTCAAGCAGAGGAATAGGGTATTTGTCTTTGATAGTCTGCTTGTTGAGTCCTCTATAGTCAACACATAATCTCCAGGTACCGTCCTTTTTCTTAACAAGAACAATAGGAGAGGAGTAGGGACTGGTGCTGTGCTGTATAAGTCCTTGTGTTAGCATCTCGTTGATTATTTTGTCAATGCTGTCTTTCTGCAGAGATGAGTAACGGTAAGGACGAAGATTGACAGGGTTGGAGCCGGAGAGCAGAGGTATCTTGTGATCGAAGCCTTCGCGAAAAGGTGGGAGGGACTTAGGCTCCTCAAATATATCAGAGAAAGCATCTTGCAGCTGTAGCAAAGCAGGA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
132Start:
6596185End:
6596316Strand:
->R1_LTR-Gypsy_14
ATCGTCATCACACTCCATTACAAAGATTTGAGACCTCTTGTGCTTCAGTTGGTGACCTGGAGTAAATGTCTCCTCACAGAACATACAAAGGCCTTTTGAGCGCCTGTCCTGCATTTCTTGGTAAGAGTATTT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1188Start:
6811650End:
6812837Strand:
+>R1_LTR-Gypsy_15
GTCAGGCCCTACCGATATGCATATTTTCAGAAAGACGAGATTGAACGTCAAGTGAACGACATGCTCACTACCGGTATCATTCGTCCTAGCTCGAGCCCTTTCTCGTCACCAGTCCTCCTAGTCAAAAAGAAAGATGGTTCCTGGCGTTTTTGCACAGACTACAGAGCCCTCAATGCTGCAACAGTGAAAGATCGATTTCCAATCCCTACGGTGGAGGACATGCTCGATGAACTACACGGTGCAGCCTTCTTCACCAAGCTCGATCTAACTGCAGGGTATCACCAAGTCAGGATGCACCCGCAAGATGTTCACAAAACGGCTTTTCGTACACATAGTGGACATTACGAATATCTGGTAATGCCCTTTGGCCTCTGTAACGCACCATCTACCTTTCAGTCTCTTATGAACGATATCTTCCGACCTCTGATGCGCAAGTCAGTATTGGTATTCTTCGACGATATACTTATCTACAGTCCGACATGGGCAACACACCTACAGCATGTTCGTGAGGTTCTCAACATCATTCGTCAACACCAACTCTCGGTTAAACTGAAGAAGTGTGAGTTTGGGAAACAAGAGTTGGAATATTTGGGCCATATCATCACACACACAGGAGTAAAAGTGGACTGCTCCAAGATCAAAGCTATGACGGATTGGCCAGTTCCAACATCAGTAACAGACCTCCGAGGCTTCCTCGGCCTCACCGGCTATTATCGCAAATTTGTGCGGGACTATGGAATCATCGCTCGACCACTGACCAACCTATTGCGCAAAGGAAAGTTCGTGTGGGATGATCCAGCTGCAGAATCATTCCAGAAACTGAAGGTTGCAATGACTACTACTCCAACTCTGGCGCTTCCCAACTTCTCTCAGCCATTTGTGATTGAAACCGATGCGTCAGGAGAAGGTATTGGTGCTGTCCTCTCTCAGAATCATCAACCCATTGCTTTTATGAGCAGATCTCTCGGGCCTACTAAAAGATCTTGGTCTACATATGCTCGTGAGATGTTGGCTATCATTGTAGCAATACGGACATGGCGACCATACTTACTTGGGCGTAAGTTCACCATACAGACTGACCAACGAAGCCTTCGGTACATGCTTGAGCAACGCATCCTCACTCCTGAACAACAAAAATGGATGAGTAAGCTGGTGGGATATGACTACGACATCGTCTATAAGCCAGGT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
538Start:
6813237End:
6813774Strand:
+>R1_LTR-Gypsy_16
ACCATGTCTCCAGCCGGCCTTCTCCAGCCATTACCAATACCGGAACAACTGTGGGAAGATGTCTCAATGGACTTTGTCGATGGCTTACCAAAATCGCAAGGTTACACGTCTATCATGGTCATCGTCGATCGGTTAACAAAATCAGCACACTTGGTCCCTCTATCGCATCCTTACACAGCTGCATTGGTCGCTACAAAGTTCGTGGAATATGTTGTCAAGCTCCATGGTCTGCCAAGGTCTATTCTCAGTGATCGGGATCCTATCTTCCTCAGTAACTTCTGGAAAGAACTCTGGAAAATGCAGGGCACAACACTTCGCATGTCTTCCGCTTACCACCCACAAACAGACGGTCAAACCGAGGTGGTGAACAGATGCATCGAACAGTTCTTGCGATGTTTTGTGCAGCACAAACCGAAGCAGTGGAGCTCTTTCCTACCTTGGGCTGAGTACTGGTACAACACAAGCTTCCACTCCAGCACTGGTACAACCCCATTCCATGCTCTCTACGGACGACCCCCACCATCTTTGCCAAGGTATG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
227Start:
6813876End:
6814102Strand:
+>R1_LTR-Gypsy_17
ATGAAGCAACAAGCTGATCGTAAGCGCCGTGATGTGGAATTTGAAGTAGATGAATGGGTCTTCTTGCGGTTACAGCCTTACAGACAGAAGTCAGTGTTCAAAAGATCCTCGCAGAAGTTGGCAAACCGTTTTTTCGGTCCTTTCCAAGTTGAGAAGCGCATTGGACAGGTTGCTTATCGGCTCAAGTTACCTAAAGGAGCTAAAATTCATCCGGTGTTCCATGTCTC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
134Start:
6814236End:
6814369Strand:
+>R1_LTR-Gypsy_18
GTCACTGAAGTATTGGTGCAATGGAAAGGGTTGACTATAGAAGAAGCAACATGGGAGGATTATTTTCAACTCAAGGTTAGCTTTCCACACTTTAATGCGAACCTTGAGGGCAAGGTTCTTTTGGACCGTGGGAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
94Start:
7378934End:
7379027Strand:
->R1_LTR-Gypsy_19
TACTTGGTTCAGACATTTTATCAAACACCTTGTGGGTGGGAAATGCCTAGAGCTCTAGATCAAAGATGCCAATTTTAATCTAGCATTAAGAATA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
372Start:
7477904End:
7478275Strand:
+>R1_LTR-Gypsy_20
AGTTAAAGACTATTTCGTTACAGTCTTTTTATGGGATTGATTCTCCTACTACAACAAAATTAAAAGGGATCATCAAGAAACATACTATGGTGGTCATGTTGGATAGTGGGGCTACTCATAACTTCATCTCCCCAATGATGGTAGAGCAGTTGAAACTGAAGCTTGATAGAGCACAAGGCTTGGAAGTCTTGCTTGGTACGGGAGTCTCCGTGAATGGTACAGGAGTTTGCAGAAGTGTGCAGATAAATCTTCAAGGAGTGACTTTTACAACTGATTTTATCGTCTTGGACTTGGGAAATATTGATGTCATCCTGGGAATGCATTGGTTGAGAACTTTAGGAAAGTGCCAGATCGACTGGGAGAAACATGAAT