ID Class Order Superfamily Length Start End Strand View
R1_LTR-ERV1_1 RetrotransposonsLTRLTR-ERV11182044686720446984-
R1_LTR-ERV1_2 RetrotransposonsLTRLTR-ERV11172051128420511400-
R2_LTR-ERV1_3 RetrotransposonsLTRLTR-ERV12082567750425677711-
R2_LTR-ERV1_4 RetrotransposonsLTRLTR-ERV1914211591442116004-
R2_LTR-ERV1_5 RetrotransposonsLTRLTR-ERV1914212570442125794-
R3_LTR-ERV1_6 RetrotransposonsLTRLTR-ERV19340033144003406+
R3_LTR-ERV1_7 RetrotransposonsLTRLTR-ERV1871177107211771158+
R3_LTR-ERV1_8 RetrotransposonsLTRLTR-ERV11181481878014818897+
R4_LTR-ERV1_9 RetrotransposonsLTRLTR-ERV1991028893310289031+
R4_LTR-ERV1_10 RetrotransposonsLTRLTR-ERV11331756440917564541+
R4_LTR-ERV1_11 RetrotransposonsLTRLTR-ERV11182056729820567415+
R4_LTR-ERV1_12 RetrotransposonsLTRLTR-ERV11182409169224091809-
R4_LTR-ERV1_13 RetrotransposonsLTRLTR-ERV1852540684025406924+
R5_LTR-ERV1_14 RetrotransposonsLTRLTR-ERV11841781854817818731+
R5_LTR-ERV1_15 RetrotransposonsLTRLTR-ERV11221869000318690124-
R5_LTR-ERV1_16 RetrotransposonsLTRLTR-ERV11011970260319702703-
R5_LTR-ERV1_17 RetrotransposonsLTRLTR-ERV11572127276121272917-
R5_LTR-ERV1_18 RetrotransposonsLTRLTR-ERV1842210015022100233+
R5_LTR-ERV1_19 RetrotransposonsLTRLTR-ERV11183311051833110635+
R6_LTR-ERV1_20 RetrotransposonsLTRLTR-ERV111850081995008316-

< 1 2 3 4 > Total 4


Raphanus sativus (v1.0)

ID:

R1_LTR-ERV1_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

20446867  

End:

20446984

Strand:

-

>R1_LTR-ERV1_1

ATCTTGGGAAGATAATGCTCTTGAAAAGTTTGACAACTACAGATGCATCATTTGTTGGAGAAGCAACTGCCTCAACCCATTTCGAAACGTAGTCTACAGCGACTAGGATATATTTGTT

Raphanus sativus (v1.0)

ID:

R1_LTR-ERV1_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

117

Start:

20511284  

End:

20511400

Strand:

-

>R1_LTR-ERV1_2

ATCTTGGGAAGATAATGCTCTTGAAAAGTTTGACAACTACAGATGCATCATTCGTTGGAGAAGCAACTGCCTCAACCCATTTTGAAGCGTAGTCTACAGCGACTAAGATATATTTGT

Raphanus sativus (v1.0)

ID:

R2_LTR-ERV1_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

208

Start:

25677504  

End:

25677711

Strand:

-

>R2_LTR-ERV1_3

TCTATAAGTATCTATGTGTTATGTATATATGTGTCAATATGTGCTATGTATATATGTGTCTATATACGTGTTCAGTATATGTGTGTATGTGTTCAGTATATGTGTGTGTATGTGTTCAGTATATAATGTGTGTATATATGAGTATATATATGTTCAGTTTCAGTTTATATCTGTATGTGCCTATATGTGTCTGCATATGTTTAGAATA

Raphanus sativus (v1.0)

ID:

R2_LTR-ERV1_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

91

Start:

42115914  

End:

42116004

Strand:

-

>R2_LTR-ERV1_4

CATAAAACCAAAAAGAGAAGAGACTCATATGAAAACAGAAAAAGCATCAAACATTTCATAAACTTTGGCATATTTATGGTTCTTTTCTTCT

Raphanus sativus (v1.0)

ID:

R2_LTR-ERV1_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

91

Start:

42125704  

End:

42125794

Strand:

-

>R2_LTR-ERV1_5

CATAAAACCAAAAAGAGAAGAGACTCATATGAAAACAGAAAAAGCATCAAACATTTCATAAACTTTGGCATATTTATGGTTCTTTTCTTCT

Raphanus sativus (v1.0)

ID:

R3_LTR-ERV1_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

93

Start:

4003314  

End:

4003406

Strand:

+

>R3_LTR-ERV1_6

TAAAAATACAAAAACATACATACACAATTACATACATGCATTCATATATGCATATGTACATACTTCGTTCTGTATATATTCATGCTTCCATAC

Raphanus sativus (v1.0)

ID:

R3_LTR-ERV1_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

87

Start:

11771072  

End:

11771158

Strand:

+

>R3_LTR-ERV1_7

AAATACATAAATACATACATGAGTTTATATATGCATATATACGTACGTACTTTCATACTGTATACAGTCAAAATTGCTTACATACAT

Raphanus sativus (v1.0)

ID:

R3_LTR-ERV1_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

14818780  

End:

14818897

Strand:

+

>R3_LTR-ERV1_8

AACAAATATATCCTGGTCGCTGTAGATTACGTTTCAAAATGGGTCGAGGCAGTTGCTTCTCCAACAAATGATGCATCTGTCGTTGTCAAACTTTTCAAGAGCATTATCTTCCCAAGAT

Raphanus sativus (v1.0)

ID:

R4_LTR-ERV1_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

99

Start:

10288933  

End:

10289031

Strand:

+

>R4_LTR-ERV1_9

GTATACAATATATATATATATATATATTTTTAAAAATATATTTGCATATAGATATATATATATATATATATATATTTATAAGTCTAGTATAACTATATA

Raphanus sativus (v1.0)

ID:

R4_LTR-ERV1_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

133

Start:

17564409  

End:

17564541

Strand:

+

>R4_LTR-ERV1_10

TATATATATTTAATAAAATATTATATATATGTCTAATATGTGTATATATATATATGTTACACAAAATATATATAATATTATATACACATATTATATATACCATATATTATTAATTGAAATTTGACAAATCAAT

Raphanus sativus (v1.0)

ID:

R4_LTR-ERV1_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

20567298  

End:

20567415

Strand:

+

>R4_LTR-ERV1_11

AACAAATATATCCTGGTCGCTGTAGACTACGTTTCAAAATGGGTTGAGGCAGTTGCTTCTCCAACAAATGATGCATCTGTCGTTGTCAAACATTTCAAGAGCATTATCTTCCCAAGAT

Raphanus sativus (v1.0)

ID:

R4_LTR-ERV1_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

24091692  

End:

24091809

Strand:

-

>R4_LTR-ERV1_12

ATCTTGAGAAGATAATGCTCTTGAAAATTTTGACAACTACAGATGCATCATTTGTAGGAGAAGCAACTGCCTCAACCCATTTTGAAACGTAGTCTACAGCGACTAGGATATATTTGTT

Raphanus sativus (v1.0)

ID:

R4_LTR-ERV1_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

85

Start:

25406840  

End:

25406924

Strand:

+

>R4_LTR-ERV1_13

TACATATATATATCAATATATAAAAATATTTATCTATTATATATATATATAAATATATATAGTTATCTGTTAGAAATCGATACAG

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

184

Start:

17818548  

End:

17818731

Strand:

+

>R5_LTR-ERV1_14

CACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTAT

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

122

Start:

18690003  

End:

18690124

Strand:

-

>R5_LTR-ERV1_15

CCAAATCTTGGGAAAATAATGCTCTTGAAAAGTTTGACAACTACAGATGCATCATTCGTTGGAGAAGCAACTGCCTCAACCCATTTCGAAACATAGTCCACAACAACTAGGATATATTTGTT

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

101

Start:

19702603  

End:

19702703

Strand:

-

>R5_LTR-ERV1_16

CTCTTGAAAAGTTTGACAACTACAGATGCATCATTTGTTGGAGAAGCAACTGCCTCAACCCATTTTGAAACGTAGTCTACAGCGACCAGGATATATTTGTT

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

157

Start:

21272761  

End:

21272917

Strand:

-

>R5_LTR-ERV1_17

TCTCTACATATTTTATCAAATTTCTATGCTTTTCGCTATTCCACTTCCGTCTTAAGCTGTTGTTTGGAATGTAGATACATATATACATATATGTATGGATACATTACCATACATACATATATCTATATATGCACATAGATACATATATGTAAATGTA

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

84

Start:

22100150  

End:

22100233

Strand:

+

>R5_LTR-ERV1_18

TAAAAATACAAAAACATACATACGCAATTACATACATGCATTCATATATGCATATATACGTACTTTCATACTGTGCTTACGTAC

Raphanus sativus (v1.0)

ID:

R5_LTR-ERV1_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

33110518  

End:

33110635

Strand:

+

>R5_LTR-ERV1_19

AACAAATATATCCTGGTCGCTGTAGACTACGTCTCAAAATGGGTTGAGTTGCTTCCCCAACAAATGATGCGTCTGTAGTTATCAAACTTTTCAAGAGCATTATCTTCCCAAGATTTGG

Raphanus sativus (v1.0)

ID:

R6_LTR-ERV1_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

118

Start:

5008199  

End:

5008316

Strand:

-

>R6_LTR-ERV1_20

ATCTTGGAAAGATAATGCTCTTGAAAAGTTTGACAACTACAAATGCATCGTTTGTTGGAGAAGCAACTGCCTCAACTCATTTTGAAACGTAGTCTACAGCGACTAGGATATATTTGTT