ID:

R1_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2271

Start:

57933  

End:

60203

Strand:

+

>R1_LTR-Copia_1

AATTGGTATCAGAGCTACGGTTCAGAGACTCGACGAGATCGGCGACGGGATCGAGATGACGACTCACAAGATCAAGGTTACGATGACGATGTTCGATGGTACCGGCGATTTTGGTATCTGGAAGAAAAGGATGCTCGCTAATCTCAGCGTGCAAGGCTTGAAGGATGTTCTCACACCACAAGTCAACGATGATCCGAAGAAAGTCAAAGAGGACAAAGATTCTGAAGACGACGAGGACGTGAAGGAAAAGAAGATTCAAGACGAGGTTGCAAGAAAGGAACGCGACGAGAAGGCCATGAATCTCATCTTCATGAGCGTCGGAGATCATGTCTTGCGGAAGCTGGACAAGTGCACTACCGCAGCAGAAGCATGGGAACTCCTGGATAAACTCTATATGGCAAAGACTCTGCCAAATAGAGTTCACGCGCAGCTCAAGGTCTATTCCTTCAGGATGCAAGAAGCAAGATCAATCGACCAGAACGTTGACGACTTCTTGAAGCTTATAGCCGATCTCAACAATCTCAACATTGAGATTCCAGAAGAGGTGCAGGCTATTCTACTACTCAATGCTTTGCCTAACAGGTATGACTCTCTCAAAGAAACTCTAAAGTATAGTAGAGAAGCTATTAGAGTAGATGAAATAGCAAGTGCGGCTAGGTCTAAGGAGATGGAATATAAGGATGCCCCTAGCTCTAGGACATCGGGTGAAGGGAATTTTGTTCGGGGTAGAACAGAGGGTAGAAACTCTAACTCGTATGCAGGTAAAGGAAAGAACAGGTCAAGGTCGAAATCAAGAGATGATAAGCGTGTCTGTTGGATCTGCGGCAAAGAAGGGCACTTCAAGAAGCAGTGCTACAAATGGCTTGACAGAAACAAGGGTCAGAAACAAGGGTCAGATAGAGGGGAGTCTTCACTGGCTAAAGATGACGCCAAGGATCTGGTTGGGTTGTTGGTTGATGAGGCTAATTCAGCGGAGTCTGATCGAGACGAGTGGGTTCTTGATACAGGCTGCACTTTCCACATGACACCAAGAGCAGATCTGTTCATTAACATGATGCCTGCATCTGGAGGAAGAGTTCGTATGGCTAATGATACGATCACTGAAGTTAAAGGGATCGGTTCTATCAGGTTTGAGAATCCAGACAAGACTACGTTTGTTCTGCACGACGTCAGGTACCTACCGGGCATTGGAAGGAATCTGATATCAATGGGAAGTCTTGAAGAGAAGGGTTGCGAGTTTAAAGCAGCTAATGTGGTTCTGAAAGTGATCAAAGGGTGCACAGTGTTCATGAAAGGTCTGAGAAGGCAGTCTCTGTACATTCTGCAGGCGCAAGCTAGAAGTCTGGGTATTAGCATTGGAGAGACAAGCAATGTTTCAGAGTCTGAAAGAAGTCAAAACTCTGACATTCAACTCTGGCACAGTCGTATGGGTCATCTTGGACAGAAGGGTATGGAGGTTTTACGAAAGAAGGGATGTTTTGGAGAGCTGAAGCAAACTGATATGAGATTCTGTGAAGATTGTGTGATTGGCAAGACACACAAAGTTAGTTTTGGTCCTGCGCTTCATGTCACGAAGGAGAAGCTTGACTATATCCACTCCGATCTTTGGGGTTCCCCAAATGTTCCACCAAGCTTGAGTAGATCACAGTATTTTCTCACTTTTACTGATGATTACTCGAGAAAGGTATGGATATATTTTCTGAGGCACAAGAGTGAAGCCTTTGAATGCTTCGTTGCTTGGAAGAAGATGGTGGAGACGCAAAGCGAAAGGAAGATAAAGAAGCTTCGAACAGACAATGGGCTCGAGTTCTGCAACATTCAGTTCAACACGTTCTGCAAGGAGGAAGGAATGTTGAGGCACAGGACGTGTACCTACACGCCTCAACAGAACGGGGTAGCAGAACGACTTAACCGAACCATCATGAATAAGGTTCGCAGTATGCTTAGTGAGAGTGGTTTTGAGGTAAAGTTCTGGGCAGAGGCGGCTGCAACGGCTGTGTATCTCATTAATCGATCACCTTCTTCAGCGATTGATTTTGAGATACCAGAGGAGAGGTGGTCTTCAGTTACTCCAAGCTTTAAAGACTTGAAAAGATTTGGGTGTTTGGTGTTTGTACATACAAGTGATGGCAAGCTGAATCCTAGAGCTAGGAGAGGCTACTTCACGGGTTATCCAGAAGGAGTTAAAGGCTATAAGGTTTGGATTTCTGAAGAAAAGAAGGTGATAATCTCTAGAGATGTGATATTCAGAGAAGAAGTTGTCTATAAAGA

ID:

R1_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1708

Start:

60379  

End:

62086

Strand:

+

>R1_LTR-Copia_2

GAAAATTATCAACTAGCTAAGGATCGGACAAGAAGACAAATCAAACCACCTAAGAGACTTGAAGACTACGAGTGTGATGTAGCTGATGGGGAGGACATATACGCATGTTACATATGTGATTTGCCAGAGGATGCTGTTACAGAACCATCCTCGTGGAGAGAAGCTATGGAGGATCCAGACAGTGATTTCTGGAAAGAAGCAGCGGGAGACGAGATGGTTTCATTGAAGAAAAACGGTACATGGGTTCTCGTTAACAGGCCGGCAGATCAGAAGACAATTGGCTGCAAATGGGTGTTTAAGAGGAAGCCGGGTATTCTTGGAGTGGAGCCACCGAGGTATAAAGGAAGATTAGTGGCTAAGGGATATTCACAAAAGGAAGGTGTGGACTTCCAGGAGATTTTTGCACCGGTTGTCAAGCATGTATCGATTAGGTACATACTGTCTGCTGTTGTGCATTTCGACATGGAGCTTCAACAAATGGACGTCAAGACGGCGTTTCTACACGGGTCTCTGGATGAAACGATTTACATGGATCAACCGGAGGGGTTTGTTGATAAGAAGTTTCCTGAGAAGGTGTGTCTACTGAAGAGGTCTTTGTACGGTTTGAAGCAATCTCCTCGGCAGTGGAATAGAAGATTTGATGATTTTGTTAGAGCACAAGGCTACACGAGAAGCGAGTATGATCAGTGTGTATACTTCAAGAAGAACAGAGAAGATGTCTACGTATATATGCTCTTATACGTAGATGACATTTTGATTGCTTCGGTGGATAAGGCTCAAGTGAATCAGTTGAAGAAGGTTTTGAACTCTGAGTTCGAAATGAAAGACTTGGGAGATGCGAAGAAGATTTTAGGAATGGAAATACACAGAAACCGAGAGACAGGAGAGTTATGGGTTTCTCAGGAGGGATATCTGTGGAAGGTTTTATCTAACTTTGATATGGATCAGGCTAAAGAAGTGACAACGCCTATTGGAGCACATTTTAAGCTCAAGTCTGGGTCCGAGAAAGAGTTAAAGGATCAAGCTGAATACATGAGCAAAATTCCATATCAAAGTGCAGTTGGTAGCATCATGTATGCTATGGTGGGAACGAGATTGGATCTCGCATATGCAGTGGGTTTAATCAGCAGATTTATGTCGAAGCCACTTAAGGAGCACTGGCAAGCAGTAAAGTGGGCTCTTCGATATATTAAGGGGACAGTTGATACAAGATTGTGCTACAAGAAGAAAGGAGAGTTCATCATAAGAGGGTATACAGATTCAGATTACAATGGTGATTTGGATCAAAGGAGATCAACCTCTGGTATGGTGTTTACAGCAGGAGGCAATCCGATAAGCTGGAGGTCTTCACTTCAGAAGGTTGTAGCCTTGTCGACTACAGAAGCGGAGTACATCGCATTATCGGATGCAGTGAAGGAAGGTGTGTGGTTGAAGCGTTTTGCAGAGGAGCTTGGGTTTCCGCAAGAGTCTGTGGAGATTTTCTGTGACTCACAAAGTGCCATTGCACTTTCGAAGAATGCTGTATATCACGAGAAGACAAAGCATGTTGCGACTAAGTACCATTTCATTCGTGATCTGATAGCTGCTGGTGAGGTTCAGGTTCTGAAGATAGCAACAGAGTATAATCCTGCTGATATCTTCACGAAGGTGTTACCAGTGTTTAAGTTTCGTGAAGCACTGAGGTTGCTTCGAGTCTCCAAGAACTAAG

ID:

R1_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

138

Start:

92685  

End:

92822

Strand:

+

>R1_LTR-Copia_3

AGGAGAAAAGCAGAAATCTTGAGCATAGTCTGAACGAAAACAACAAGAAGATCAGGATGTTAAGCAAAGGAACAAAGGATTTGGATACTCTTCTTGCCATGGGACAGCCTGCAAAACAGAATTGGGGTCTTGGATACA

ID:

R1_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

109

Start:

95166  

End:

95274

Strand:

+

>R1_LTR-Copia_4

GTAAGGTTGGGTAGATTAGAAATTGGTCAGTGTCGATTCACAGATGTGAAGTCGAGTAAACCTGATTAAACAAAGAGTGTAATTTGTTTAAAAGATTTCTAATAAAAGA

ID:

R1_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4724

Start:

118201  

End:

122924

Strand:

+

>R1_LTR-Copia_5

ATTTATTCTATTTGATTATTATTTTATTGTTTCAGTGAACTATGTCAAAGTTTACTAGTCTTGAATTTGAAGTTTTTGATATCACTGGAAACAATTACTTGGCTTGGGCATTAGATGCCGAATTTTCCCTTAGTGCAAAAGGACTTGAAGCTACAATCTTAGAAGGAAATAAAGCTGAAAGCCAAGATAAAGCAAAAGCTATGATACTCCTTCGTCATCACCTCCATGTAGATCTCAAGAATGAGTACTTGACGGTGAAAGATCCGCAAATCCTTTGGAACAACTTAAAGGAAAGGTATGACCACCAGAAAACTGTGATTTTACCTAAAGCTCGGTATGAATGGACACATCTGAGGTTACAAGACTTTAAGTCTGTAAGTGAGTACAACTCAGCCTTGTTCAAAATTACCTCCAAATTGGAGTTATGTGGAGAGAAAATCACGGAAGCTGATAAGTTAGAGAAAACATTCTCTACTTTTCATGCAAATAATCTTGTCCTGCAGACACAATACCGTGAAAAGGGATTCCAGAAGTATTCCCAACTTATATCTTGTCTCCTTGTGGCTGAGCAAAACAATGAGCTTTGAAAAATCATGGACTATGTCCAACTGGTTCTGCTCCATTCCCTGAAGCGAATGTGACTGAACAGAACAACACGGGCCGCAGAAATGGCTACACTCGTGGTCGCGGTCGTGGTCGTGGACATGGTCGTGGAGATACACGTGGACGTGGATATGGTCAAATTCGAGTCCGAGGAGTTTCTTTTAAGAACTCTAACTCTCACCAGAAGTGGGAAAACAAGGATGGTAACAAACAAGCAACTGAATGCTACCGATATGGAAGTAAAGACCATTGGGCTCGTACGTGCCGTACACCAAAGCATCTTGTTGACCTGTATCAAAAATCAGTGAAACAAAAGGGAAAGAATGTGGAAACAAATATGGTGTACGAAGGTGGAGAGGGAGACTTTGATATGGTTGATACCACTCACCTTGACATTTCCGATTTTCTCATTGACGAAGAGAAAAAGTGACCGAGCAATAACTATTAAAGAGATGCTTTGTTTTTATTTATTTATGAGCTTTTAATTATTTGACTTTTAATTTTATTTATTATGGTGTTGTTTCTTTTGCATTAATGAATTTAATATATTATTTTATGAGATTATTATTTATTTTATTTATTTATTTGAATAGAAATGGATGGTGGAGATTTATGCTTGGCAGACAGTGCAACTAGTCACACAATTCTGAAAAATAAGAAATATTTCTCTCATTTGATAAATAGAGAAGCAAGTGTGAGCACTATAACACGAAGTGCAAAAATAATTGAAGGCTCTGGAAAAGCAAATATAATACTTCCTATGGGAGCACAACTTGAAATAGTTGATGCATTGTATTCCCCTAAGTCTCAAAGAAACTTATTGAGTTTCAAAGATATTCGCCGAAATGGATATCATATTGAGACAATGAATGAAGAAAATATTGAATTTCTTCATATTACAAGTATTATCCATAGCTCTAAGAAAGTACTAGAAAGACTACCAGCATTCTCCACTGGATTGTATTACACTAAGATTAGTACAATTGAGGCAAATGCCATTGTAAACCAGAAGTTTACTGAAAAGATTACTGTTTGGCATGACCAGTTAGGCCATCCCAGTTCAACAATGATGCAAAAAATAATCACAAATTCATGTGGGCATCCACTGAAGAACCAGAAGATTCTTCCCAATGATTTTTCATGTGCTGCTTGTTCTCAAGGAAAATTGATCATAAGGCCTTCACCAGCCAAGATAATTCATGAATCAATAAACTTTCTGGAACGTATTCAAGGAGACATTTGTGGGCCGATTCACCCACCATGTGGAACCTTCAGATATTTTATGGTTCTGATTGACGCATCAACAAGATGGTCACATGTTTCTTTGTTATCAACTCGCAACCTGGCGTTTGCGAGACTGCTTGCTCAGTTGATCAAATTACGAGCACACTTTCCAGATTTTCCTTTAAAGGCAATTCGTCTATACAATGCTGGTTAATTCATGTCTCAGGCTTTTAATGATTATTGCATGTCTATTGGAATAAGTGTTGAACATCCTGTAGCACATGTTCACACACAAAATGGTTTAGCTGAATCGTTAATTAAACGTCTTCAGTTGATTGCTAGACCATTGCTTATGAAATCAAAACTCCCAGTCTCTGCATGGGGGCATGCTATATTACATGCAGCAGCATTGATTCGCATAAGGCCAATGAGTAATCATCAGTTCTCCCCATCACAATTGATTATGAGTCAAGAGCCAAATATTTCTCATCTTAAGATATTTGGATGTGCAGTATATGTTCCAATTGCTCCACCACAGCGAACTAAAATAGGACCTCAAAGGAGGTTAGGAATATATGTTGGATATGATTCTGCATCAATCATTAAGTATTTAGAGCCATCCACAGGGGATTTATTTAAGGCCCGATTCGCAGATTGTCATTTTAATGAGTCTGTTTTTCCAACATTAGAGGAAGAGAATAAATAGTTGGGAAAAGATATTAACTGGAATGAATTATCATTATCTTATCTTGATCCTCGAACTAAAGAATGTGACTTAGAAATCCAAAAGATAATTCATTTACAAAGCTTAGCAAACCAGTTGCCAGATGCATTTACTGACCCAAAGAAAGTGACCATGTCACATATCCAAGAAGGACAAAATCAACCTGCTAATGAGTCTAAGACACGCCTGAAGCGTGGTAGACCTGTCGGTTCTAAAGATAAAAATCCTCGGAAAAGAAAATGAACAGAAATTGGCAATAATGAAACCGATGTAATAAATACGAATGAAAAATCTCCAGAAGAGAACATGACACCAAAGAAAATTCAGGTACCTGATAATGAAGAGATCTCAACCAACTTTGTCATGTGTGGAATAAAATGGAACCGAAATCAAATCGACGTCGATGATATTTTTGCATACAAAGTAGCAGCTGATCTTATGGATGAGGATCATGAACCAAAATCTATTGAAGAGTGTACACGAAGAAGTGATTGGCCAAAATGGAAAGAAGCAATAGATGCTGAATTAAAATCTCTTGCAAAGAGAGCAGTTTTTGGACCTGTAGTCCGTACACCTAAAGGTGTGAAACCAGTGGGTTACAAATGGGTTTTTGTACGAAAGAGAAATGAAAACGGTGAGATTGTGAGATACAAAGCACGTTTAGTTACTCAAGGATTTTCACAAATACCCGAAATTGATTACGAGGAAACATACTCTCCTGTGGTGGATGCTACTACATTCAGGTTCCTTATCAGTCTGGCGATAAAGGAAGGACTTGATTTACGCTTAATGGATGTAGTCACAACTTACTTATATGGCCCACTGGATACTGATATTTACATGAAAGTCCCTGAAGGATTTAAACTGCCTGAAGCAGAAAATTCTAATTCTCGAGAAAGTTATAGCATAAAGTTAAATCGATCTCTTTATGGACTGAAACAGTCAGGACGTATGTGGTATAATCGTCTAAGTGAGTACTTGTTGAAAAAGAAGGCTATAAAAACGATCCTATCAGTCCATGCATCTTTATAAAGAGATTTGAAAAAGGATATGTTATCATTGCAGTGTATGTTGATGATTTGAACATCATTGGAACTCCTGAAGAGATCTCACATACAATGGAATACTTGAAAAAAGAATTTGAGATGAAGGATCTAGGAAAAACAAGATTTTGTTTGGGACTACAAATTGAGCACCTCAAGAATGGAATCTTAGTGCATCAAGAAACTTACACAGAAAATGTGGCTAAACGATTTTCTATGGATCAAGCACATCCTTTGAGTAGTCCAATGGTTGAATAAAGATCACTTCCGCCCTAGAGAAAAGGATGAAGAAGTTCTTGGTCCTGAAGTACCATACTTAAGTGCAATAGGGGCACTAATGTACCTTGCCAGTCATACAAGACCTGATATATCATTTGCAGTGAATCAATTGGCAAGGTTTAGTTCATGCCCAACTCGTAGGCATTGGAATGGGATAAAACATATACTTCGTTACCTCCAAGGTACGAAAGACATGGGTATATTCTTTCCTAAACCATCAACAGAAGATTTGATTGGTTTTGCAGATGCCGGGTACATGCCTGATCCCCACAATGCTAGATCACAAACAGGATATGTGTTTACTTGTGGTGGAACTGCTATCTCTTGGCGTTCGATGAAGCAAACCATTGCAGCTACTTCTTCCAACCACGCAGAGATTTTAGCCATTCATGAAGCTAGTTGCGAGTGTGTATGGTTAAGATCAGTCATTCAACATATACGAGAAGATTGTGGTCTATCTACGGGGAAAGAAGCCCCTACAGTCATGTATGAGGACAATGCTGCATGTATCGCTCAACTCAAAGATGGATACATCAAAGGAGACAGGACAAAACACATTCTACCGAAATTCTTTTTCACTCATGATCTGCAGAAGAATGGCGATGTTCGTGTTGTTCAAGTTCGTTCAAGCGACAATCTGGCTGACTTATTCACCAAGGCGCTACCCACTGCTACTTTCAAGAAGTTGGTTCATCTTATCGGATTACGTCGTCTCAAGGATCTTGACGTCTGTACACATGAGGGGAAGTAATTGCACGCTGCACTCTTTTTCTCTTAACCATAGTTTTTTCCATTGGGTTTTCCTGGTGAGGTTTTTAATGAGGCAGCATCTTACGCGTATAATAGACATC

ID:

R1_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

100

Start:

165067  

End:

165166

Strand:

-

>R1_LTR-Copia_6

CTTTATTAAGAATCACTTAAACAATCTTTTACAAAGACTTGTCTAATCCGAATTACTCAACGCCACACAGGCTTGACACGGACCAATTCTTAATCTACCC

ID:

R1_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

179

Start:

166852  

End:

167030

Strand:

-

>R1_LTR-Copia_7

AGTTAGAGATCAGAGATTCCAAGAGCTTTTCGCATACACAAAAAGCAATTGAAGTAAGGTAGTTTGGTAACTATATCAACAGCTTTGTTCTCAGATGCAACATGTTCAATGATAACAAGTTTTTCCTCTTCTAATTCTCTAACAAGATGATGTCTAATAACTACTTGCTCAGTCAATGA

ID:

R1_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

194

Start:

168335  

End:

168528

Strand:

-

>R1_LTR-Copia_8

TGATAGCCCAAGCCTGAACTGATTTTTGGAGACTGTCCAATTGATAAAAAATGATCCAGAGTTGCTGAACCAGTGTTCAACATCCTCACTTGCTTATGATTCTCAGTGAGTTGCCTTTCCAGAAACTGATTTTTCTCAAGTTCTTGATTCAGCAGTTGTTTCATCTGATGAAACTTTGTTTCAGACTCTTGTAG

ID:

R1_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1365

Start:

168638  

End:

170002

Strand:

-

>R1_LTR-Copia_9

TCCAGGATATTGACTTGCGCCTTCAACATAGCTGTATCTTTGATGAGTTGCAGATTTTCATGGCTGAGTTCTGCGAATTGTTTGAACAATGCTCTATATTCAGACTTGAGATCAGCAGTCATATCTTCTCCCTCTCTCTCTGAATCTGAGTCTGAGCTAGAATGATGATCACTCATTGTATTCTGACCAGTAAGAGCAACAAAGTTGTTCAACACACCATCTTCATCACTCTCACTTTCTGATTCAGTGTCACTAAAGCATAAAAGAGATTTGTCTTTCTTCAGATTGCTTGGACACTCGCTTGCAGTAAGTATGATACCCTTGCATTCAATACACCTAAGCTCTTTTATCTTTGTTACAGGGCATTCCTTGCGAAGATGGCCAAAGCCTTCACACTCTCGACACTGTAAATTATTCTCCTTCTTTCCCTTAGATGGTTCAGACCTAGAACCTTGATTGCTGAAGTGCTGTGAGTCGTTCATGGAGGACTGAATACCTGATCCTTTCTCACCTTTCCCAACATGTTTGACCATTTTGTTGAATTTCTGAACCATAAGAGTTAGATTGTCTTCTAGGCGTTGAACTCTATCTCCTTCCTCTGATTCTGCTGCGAAAACAATCCCATATCCTTTCTGAGTTTTTGATAACTCATGGTTTTTCTCTAGATCTTGTACCTTGAGTATACCAGCAAGTTGATCAAACTTCATGTCATCAGTGTTTATCGCAATTTTTAACACAGCTTTGTAGGCTTCAAATCGAGGAGGTAAACATCTCAACAACTTCTTGACGAGCTCACTCTCTTTGTATTTCTTTCCCAGAACAGAGGCTGCACTAGCAATTTAGCTTATCTTAGACACAAAACTAGCAATAGATTCATCATCTTCCATTCGCAGGTTCTCAAACCTTGTAGCTAGATGATCAATCATTGTTCTTCTTACACTTGTGTCACCTTCAAAGTGATTGATCAGAACATCCCAAGCCTCCTTTGCTGATTCACATCCTTGAATAATTTTGAATTGGTCCAAATCAACAGCTGAGAATATTACAGTGAGTGCTTTGGAGTTGAACTTTGATGCAACTTTTTCAGATTCTGTCCATTTTTCCTTCGGTTTGGGACCATATGTGTGATCTTCCATGAGCATGGTAGGTGGCGACCAGCCTAGTTCAACAGCAGTCCAGGCGTCTTCATTTATTCCTCGAATGATATGTCTCATCTGAGCCTTCCAATGGCCAAAACTCCCTTCATCCAGCATGTATGGACTCGGTAGGGTGATGAATTCTTTCATGGTTTCAAAGACTTCTTCCGCAGGACCTCAACTTGTATGTGAATACGCAATCCAACGAGGTGACCCGCTCTGATACCAA

ID:

R1_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

101

Start:

170063  

End:

170163

Strand:

-

>R1_LTR-Copia_10

CTTTATTAAGAATCACTTAAACAATCTTTTACAAAGACTTGTCTAATCCGAATTACTCAACACCACACACGGCTTGACACGGACCAATTCTTAATCTACCC

ID:

R1_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

421

Start:

205855  

End:

206275

Strand:

+

>R1_LTR-Copia_11

TCTATATAGTATTACTAATATACCATTGCTTGGTCTTCTAAGAAACAATCAGGAGTAGCTCGCTCATCAACTGAAGCTGAATACCGTTCTGTCGCCAACACCACTGCTGAAGTCATTTGGATCAAATCTTTACTTGCAGAACTCGGGATTTCAACTTCCTCACCACCTGCAATCTACTGTGACAACAAAGGGGCTACATATCTCTGCGCAAATCCGATGTTTCATTCCGGGATGAAACATTTAGCTCTCGACTACCACTTTGTTCGTAACCATGTTCAAGCTGCCAATATAAGAGTATCACACATCCACTCTAGTGATCAGCTTGCTGATGTTCTCACCAAGCCCCTGCCACGACCACGCTTTGCTTCACTTTGTGTCAAGATCGGACTCGCTACCCCTCGTCCGTTTTGAGGGGGCGTAT

ID:

R1_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

818740  

End:

818829

Strand:

-

>R1_LTR-Copia_12

TTTAACACCAGCTGGTCTATCCACAATCCTCCATGTCTTATTTCTTATGATAGACTCCAACTCGGCTGTCATAGCTTCAAATCCAATTTC

ID:

R1_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

130

Start:

818816  

End:

818945

Strand:

-

>R1_LTR-Copia_13

TCAAATCCAATTTCTTCACAAAGTAGATAGAACCCAGCTGAGGTAAACTCTTCTCCTCCATCTGTGTGAAAGGTTTGCTTTTTAATGCTTTCATTGATCCTTTTGAATCGATTAAATACCTCACTCTTCT

ID:

R1_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

120

Start:

819511  

End:

819630

Strand:

-

>R1_LTR-Copia_14

ATCAATTCAAATCTTTAAGAATAAAGAATTTATAAGAACAACTTTTTTATTAACTTTAGAACTACTCAAAATTAAAGCTTTCAATGTTTCTCTTAAATCTCTTAAATCTTATGGAACACC

ID:

R1_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2291

Start:

846803  

End:

849093

Strand:

+

>R1_LTR-Copia_15

TCACCCTATGCCTTGTACGGATCCGATAACCCGGGTGCCGTTATTTCCTCTGTTAAGTTGAACGGAGAAAACTACAATGAATGGTCTTCGGAGATGTTAAACGCACTTCAGGCCAAAAGAAAATTAGGTTTCATCAAGGGTACGTTGAAGAAACCAGACGCAGATAGCGTCGACTTGGAGAATTGGTTAACGGTGAATTCTATGATTGTCGGATGGATCCGAGCTTCCATAGAACCGAAGGTGCGCTCGACTGTTACATACATCACAGACGCGCATCAGCTTTGGGAAGATCTCAAGCAACGCTTCGCCGTAGGGAATACTGTACGTATTCATCAGATAAAAGCAAAACTTGCTGCGTGTCGGCAAGGAGGACAGTCTGTGTTAGACTATTTTGGAAAGTTGTCTACGCTTTGGGAGGAGTTGCAGACCTATCAACCAGTTCATGTGTGCTCATGTGGAGCGGCTGCAGCGATGGCCAAAGAAAAGGAACAGGAGAAGATTCATCAGTTTGTAATGGGACTTGATGATTCTCGCTTTGGTAGCTTGTGCACCAATGTTATTGGACTTGATCCACTTCCATCCCTTGGTGAGATCTATAACAAGATGATACGAGAAGAGCAACGTCTTGAGGCTACACGAGTTCGTGATGAGCAACAAGAAGCAGTCGGTTTTGTAGCTCGACAGAATACAGCTTCAAACGACTCGTCCAACAAGGCGGAGAATACAATTCTGAGGTCTCGAATGTTGTGTTCTCACTGTGGCAGGACGGGACACGAGAAGCGAGATTGTTGGCAGATAGTGGGATACCCTGAATGGTTTACTGAGCGCAACGCGGGTCGTGGTCAGAACAGTGGCTCTAGAGGCAGAGGAGGTCGTGGCTCCGGAGGTCGTGGTCGCGGTCAGGCACACAATGCACACGCAACCAGCTCCAACTCTTCCTCCTTCCCGGAATTCACACCTGATCAGATTCGAGCACTCAGTCAGATGCTTCAAGCCAAAGCAAATACTTCGAGTACTCCGGCTGCTGATAAGCTCTCTGGTAAGAAATATAATGGTGATGTGATTCTCGATACAGGTGCGTCTCACCATATGACTGGAGACAGATCGCTCTTGACTGATATCGTGATTATACCACCATGCTCAGTGGCATTCGCAGATGGCAACAAAACGCTTGCAATTCATATGGGCTCTATGCAGTTGTCTGCAAAACTCTTCTTATATAATGTCTTATACGTACCGGATTTGAATTGCACTCTTATCTCTGTTGCAAAGCTTCTAAAGCAAGCTAACTGTTTGGCTTTATTTTCTGACACGATTTGTGTGATACAGGACCGTTTCTCGAGGACTTTGATTGGAGCCGGTGAGGAGCGTGATGGTGTGTATTACTTTACGGATATTGTCTCAGCAAAGAGTCATCGATCTTCTCTGAGTTCAGACCAAGTTCTGTGGCATCGGCGTTTGGGACATCCGTCTTTTACTGTGCTTTCAGATTTGTCTTTTATTTCCTCTAAACCAGTTGGCTCAAGTCCTTGCGACATTTGTTTTAGAGCCAAGCAAACTCGTGAGATTTTTTATGATAGTATGAATAAAACAAAGGATTGTTTTTCTCTTATTCATGTTGATTTATGGGGGCCATACAGACTCCCTTCATCGTGTGGTGCTCGTTATTTCTTAACTATTGTAGACGATTTCTCACGAGCCGTATGGACATTTCTTCTGTTAGAGAAATCCGAAGTCAAAAACGTCCTTAAAAGGTTTATTAAGTACACGGACAAGCAGTTCAACAAGCCAGTACGTATGGTTAGGAGTGACAATGGAACTGAGTTCATGGTTCTCTCATCGTATTTTAAAGACAATGGGATAGTACATCAAACGTCTTGTGTTGCAACACCGCAGCAAAACGGCAGAGTCGAGAGGAAACACAGACACATACTTAATGTTGCTCGATCTCTGTTGTTTCAAGCAAGTATCCCTGTTAAATTTTGGGGAGAAGCAATCTTAACCGCATCACATTTAATCAACCGCACACCCACAGCTATTCATAAAGGACGATCTCCATATGAAGTTCTTCATGGCGTTAAACCAGACTACAGAACTCTGCGTGTTTTCGGATCTGCTTGCTACACGCATAGGATGACTCGCGGCAAGGACAAATTTGGTCAGCGGAGTAGGCTCTGTGTGTTTCTAGGGTATCCAGTTGGAAAGAAGGGTTGGAAGGTTTATGATATCGATCGTGAGGAGTTTGTGATATCTCGAGATGTGATCTTTAGAGAAGAAATATTTCCTTTTGC

ID:

R1_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1730

Start:

849439  

End:

851168

Strand:

+

>R1_LTR-Copia_16

TTTGCAAGATTATCATCTCTACAAAGTCACCGTTGCGCCTGATGGTAATACACACTTCACGCCTCTGCCGACTTCATCATCCTCTGACGGTTCAGGTAACACTCTGTATCCCTTATCTGATTACATCACTGACGAACAATTTTCTACTGGACATCGTGCTTTCTTGGTTTCTATTACTAGCGAAACAGAGCCAAAGAATTTTAAGGAAGCAATGCAGTTGAAAGTTTGGAGAGATTCAGTGGGGAAGGAGATTGTTGCTCTTGAGGATAGTCATACTTGGGATATTACAGAGTTGCCACCAGGAAAAGAAGCTATCGAGTGTCTTTGGGTGTTCAAGATTAAGTTTAACGCCGACGGAACAATCGAACGACATAAGTCTCGTCTAGTTGTGAATGGAAAACGTCAAGTGGAAGGAGAAGATTACAAGGAGACATTTGCTCCAGTTGTTAAAATGACTACAGTCCGGTCATTGTTGCGTTTGGTAGCTGCAAATCAGTGGGATGTATATCAGATGGATGTTCACAACGCTTTCCTCCACGGTGATCTAGAAGAGGAAGTTTACATGAAGCTACCACCGGGGTTCCGTCATACTCATCCTAACAAAGTTTGTAAGCTTCGCAAATCGCTTTATGGGTTGAAACAGGCTCCGAGGTGCTGGTTCAAGAAGCTTTCTGATGCTTTACTTCGTTTTGGGTTTGTTCAGTCACATGAGGATTACTCTCTGTTCTCACTTTCTCGCCAAGGGATTGAACTACGAGTTCTTGTGTACGTCGATGACTTGTTGATTTGTGGTAACAACACTCACATGCTTCAGCGTTTCAAAGAGTATTTGGGCAAGTGTTTTGCCATGAAAGATCTTGGAAAACTTAAGTATTTTCTTGGGATTGAAGTAAGTCGTGGTTCAGAAGGGATTTTTCTCTCACAGCGAAAATACAGTCTTGATATTGTTACTGATACTGGAAATCTTGGTTCTAAACCGGTTTTGACACCCCTTGAACAGAATCATAAATTGGCTGAAGCCAAAGGACCATTGCTGGCGGATCCAAAGAAGTATCGACGGCTCTTGGGGCGACTGATTTATCTTCTAAATACGCGTCCTGACCTTTGTTACTCTATTCACATACTTTCTCAATTTATGAAGGCTCCACGCGAAGAACATTGGCAGGCAGCTCTTCGAGTAGTTCGGTTTCTTAAAGGGACAACTGGTCAAGGAATATTACTGAAATCTGATCCTGATATACCATTGACGATTTACTGTGACGCAGATTGGGGAGCGTGTCCCTTATCTCGACGATCACTTAGCGCTTTTGTGGTTATGCTTGGTGGGTCTCCCATTTCATGGAAGACAAAGAAGCAAAAGACAGTCTCCCATTCGTCTGCAGAGGCAGAATATCGTTCAATGGCTGCAGCATTGCGTGAGATTAAGTGGGTTCGTCGTCTTCTCAAGGATCTTGGTGCGGAGCAGACACAACCTACGCGGTTCTTTTGTGACAGTAAGGCAGCAATACACATAGCAGCAAATCCTGTTTTCCATGAGCGCACGAAGCATATCGAGTCTGATTGTCATTCTGTACGGGACGCGGTGAAGGATGGTACGATAGTTACTCAGCATATTCGAACAGAGTCTCAGATTGCTGACATTCTGACCAAAGCATTGGGACGTGCTACATTTCAGAATCTAGTGTCCAAGTTGGGCATTGTGAATCCACACTCTCCAACTTGAGGGGGAG

ID:

R1_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4162

Start:

890616  

End:

894777

Strand:

-

>R1_LTR-Copia_17

TCTCCACCTTGGTTGACTTACCGACAGTCGCACGCCGCAACTGATAACCTTTACCTTTCCGAACCTTAACCTTGTCGGAAAGGACCCTAGATCTTCACCGATCTAGTTGCAGTCGCTGAGTACTCTCATGCGACTTCTTCCTTCTTCAAACTTCTTCACTGGAACTGATTTTGTGAGAATATCAGCTGGATTCTCCAAAGTTCCAATCTTCGACACCTTCACTGATCCTTCAGCAATGACATCTCTGATGAAATGAAGCCTCACGTCGATGTGTTTGGTCCTCTCGTGGAAGACGCTGTTTCGAGCCAAACACAAAGCACTTTGAGAATCAGAGAAGATCTCCACCTTCTCCTGATTGAAACCGAATTCACTGGTAATTCCTTTCAACCATAACCCTTCTTTTGTTGCTTCTACTAATGCCATATACTCGGCCTCCGTTGTGGACAGAGCAACAATGTGTTGAAGACCTGAGCACCAGCTCACGGTGTTGCCTCCAACCTGAAAAATGTAACCAGTAATCGAACGCCTTCGATCCAGGTCAGATGCGTAATCACTATCACAGAAACCCTTTACTTCCAGCTTCTCTTCTTTCTTGAACGTTAACACTAACTCAAAGGTACCTCTGATATATCTCATAAGCCATTTGACAGCATTCCAGTGCTCTTCTCCAGGTGCACTCATGAATCTGCTGACGAGACCAACAGCATACGCAATGTCTGGGCGACTTCCAATCATGGCGTACATGAGACTTCCAACAGCATTTGAGTAAGGTACACTCTCCATTACCCTTTGTATCTCAGACCTTTCTTTAGCTTTAGTACTAGATAGTTTAAAATGAGAACCCATAGGTGTAGAAACGGGTTTAGATTCTTCCATCATAAAGTTTCTTAACACCTTTGCAAGATAGCTTCCTTGAGATAGAGTTAAGATGCCCTTCTCTCTGTCTCTGTGAATATCCAATCCCAGAATTCTTCTTGCTGGTCCCAAATCCTTCATTTCAAACTCGCTGCTTAGTAATTCCTTTAGCTTTTGAACCTCCTTCTTATCCTTTGCAGCCACCAACATATCGTCCACATATAGGAGCAAATAGATCAAATTTCCTTCACCGTAGTCCTTGTAGTAAGCACAATGATCATAGGCACTTCTCACAAAATCTTGAGACTTCATGAACTCATCAAATCTACGGTTCCATTGTCTGGGGGACTGCTTCAAGCCGTAGATAGATTTCTTGAGTAAGCACACTTTATCCCCTTTCTTGTATCCTTCAGGTTGTTCCATTAGGATTCGTTCCTCTAGATTTCCATGTAAAAACGCTGTTTTTACATCTAGTTGTTCTAACTCAAAATCATGATGAACAACTAGTGATAAGAGAAGCCTTATGGTAACATGCTTGACCACTGGAGAAAATACTTCGTTGTAGTCAACTCCTTCGACTTGGGAGTAGCCTTTTGCCACCACTCGCCCTTTGAATCTTCTCCCTTCACCACCAGGAACACCAGGTTTTATTTTATAGATCCACTTGCACCCTATAGTTCTTTCTCCTTTAGGACGATCAATTAGTATCCAAGTTCCATTTCTTTCTAGAGAATCCATTTCCTCATCAGATGCACGTCTCCACATTTTCCCATGCCTACTACGTATGGCTTCACCAAATGTGAGAGGTTCATCTTCTTCAACTACTTCAGACATCATTAGAGCATAGGCTGGAACATCTGCATCATCGAACCTGCTTGGAGCTTTTATGGTTCTTTTCTTCCTGTCACGAGCCAGCATGTAGTCCCTGAGATCTTTAGGTGACTCTTCTTTATCTGATTCGCTTTCTGAATCCCCTTCTTTGTCATTTCTGGAAGAAACTCCACCTCCAGATGATGACCCTGAAGTTTCTTCATTTTCTTTATCCTCAGGAAGTACAAACGTTACAGACTTCTTGCTCTTCTCCACCTGAGTCGTAACTTTTGTAGGCTTCTCGATGTCTTTGAATACAACTTCCTCTCTGAAAGAAACGTTCCTGCTTATGATAATCTTTTCATCATCAAGACTCCAAATCCTGTACCCCTTAACACCTTGCGGATATCCAATAAAGACACCTTTCTTTGCTCTGGGCTTCAACTTCCCCTGGTCCACGTGATAGAATACCAAACACCCAAATCTCCTCATGTGTTCATACTCAGGAGCACGTCCTGACCAAACTTCCTCAGGTACTTTTAGGTTTAGAGGTATAGAGGGTGTTCTGTTGATCATGTAGACAACAGTGGAAGAGGTCTCTGCCCAGAAATCTTCACTTAAACCAGTCTCACTTAGCAAACTCCTCACCTTTTCAAGAATGGTTCTATTCAACCTCTCAGCCACCCCGTTCTGCTGAGGGGTGTAGGGACACGTCTTGTGTCTTAGAATACCCTTCGTCTTACAGAAATCATCAAACGTTTTATTGCAGTATTCTAACCCATTGTCGGTCCTTAGTGCTTTGAGAGACTTCCCACTTTGATTCTCCACCAAAGCTAACCACTCTATGAACTTTGAGAATGCTTCATCTTTAGTCTTTAAGAAATAAATCCACACCTTCCGAGAATAGTCATCTACAAATGTTATGTAGTACTGACACTTTGACATGCTAGGAGTAACATTTGGAGATCCCCATAGATCTGAGTGTACATACGCTAAGGGTTCTTCTGAGTTGTGTTTGCCAGTTTTGAATGACAGCTTATGAAACTTTCCTAACACGCAATGTTCACATTTTTCTTTTTCAGATATCTCAACTCCTTGAAGGAACCCAGACTTCACTAAGCACTTCAATCCTTTGACGCTTATATGACCGAGTCGACTGTGCCATAGTGAAGTAGTATCCAGAGTGGCTTCAGCTGAGTTAGATTCTTCTTTCACCGGAGTACCATCAAGAAAATATAAGGTATCCTTGTAATCTGCAGCTATTACTTCTCTCTCACCTTTGAATACTTTTAATCTGAAATTTCTTGATTGAAACCAGCATCCAAGAGTTTCCAGCTGACCGAGAGAGATTAGATTTCTCCTAGCCGTTTCAGAGTACCGAACCCCCGTCAACACTACCACGGACTTGTCATGATTGACAATCTTTATTTTCCCAATTGCGGTGATCTCACAGTAAGTGTCATTTCCCATCAAGATCTTCCCACCATTTGTTTCTTCTAAGTCAAACATTAGATCCTTGCGGAATGTCATATGGTAGGAACAACCTGAGTCCAAAACCCAACCTTCTCTGTTGAATTGACTAGACGCAGTCAGCATGACTGGTTCATCGTCATAAGCCTTTCCTACACTAGCTTCCCCTTTAACAGAGCTTCCTTGATTTCCTCTCTTAGGGCAGTCCTTCTTGAAATGACCTTCAGCTCCACAAGTCCAACATACACGCTTTGTTGTTTTTGGTCTTGACTTGCTTCTGCTGCTTGACTTACCCTTTGAGTTGTTTTTCTTGTCAGGTCGTCCTCTTGACTGAACGAATAGACCCTCACCAGCTTTTTCAGAAGACGTACTGCCTCCCTTTGCCTTCATATCAAGCTCAATAGAGTAAGCAGCTCTTGTTATCTCCTTGAGCGATATGGTGTCTTGATCTCTTCCGTATTTCAACGTGTGTACCAAAGGTTCAAACCTGCTTGGTAAACTGTTTAGAAGGATCACAGCCTGATCTTCTTCACTTAACTCCACGTCGAGACTTGCAAGATCAGACACGAGCTTCGTGAAGACGTCCAAGTTCTTATCCAGGTTCTTATCCTCCTCCATCTTATAGCTGTAGAACCTTTGCTTAAGATAGAATCTGTTAGGTAGAGACTTGATTTGGTAGGTGGACTCTAGTGCAGTCCACATTTCCAGAGCAGTCTTTGACTTAATGACTTTACGCAGCACCATGTCACTTAAGCTCATGCTCAGTAGGTTTCTCACCCGCCTATCCTTGTCTAGTCTCTTAGGATCATCACCGCCCTTTGAACCCGAGCCGTCTTCATCAACTGTCTTTCCTTTAGGATCAGCTTCTTCTGGTTGTAGGACAGAGTCCAAACCTAGAATCTCAAGCTGAGCCAACACCTTATGTTTCCACAAGGCAAAATCACCCTCTCCATCGAACTTTTCAACCTCAAACCTCCCCAACGTAGGCTCCATGACTCGCAACCCCAGATCTGATCAGAACCTGTCA

ID:

R1_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

89

Start:

1070228  

End:

1070316

Strand:

-

>R1_LTR-Copia_18

CAGAGGCGAGATATTATCTCTTTCCTTAACTCAAAATACGTCCCGTAGTGCGACGGTTCGATAACGTAATGAGTCCCAGGATACAACTG

ID:

R1_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

467

Start:

1070987  

End:

1071453

Strand:

-

>R1_LTR-Copia_19

ATCCCCCACATGAATAGAAATGCTTCTAGACACTAGACGACTCAAGACTTGACTTAAGACTCGACAAGACTCAACTAAGGACTTTTGAGAGTACAAACGAGAAATTCACTGCATGATGAGTTGGTAGCAATTTTTCAGCCTTGAACCAGTCATTGTTAATAGCTATCGGATTTACTCGGCCAGGAGGTGGCCATGATGTCTTGAACCTCCCGGACTTTGGTGTAAACCTAGACAATAGCCAAAACACAGTTTCATTCTCTCACAAAACCAATTTCTCTATTGTGTTCATTTTGGCCGTGAACATTCCTGGTAATCATGAGTGAACTTTAGAGAATATAACCATTTTATTCTCCTAGAAACGGCCCCATTTCACACCCACAAGGTGATTTGCCATTAGTTTTGTTTAGAGGAGTATCATGTACTACTCCATTCATATCTCAAAACAATTGGCACAAATCATTAAAAGC

ID:

R1_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

105

Start:

1137542  

End:

1137646

Strand:

-

>R1_LTR-Copia_20

ATAAGAGACACAATTCTCCAATCTAAAGTCACGACTCTTACACACAACTTTTGATACAACATGATAACTTACTTAATAACTAAAGAACTCAATTACAAAATAACA