TBGR-Browse-Rsa-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
R2_LINE_1	Retrotransposons	LINE	LINE	110	4805639	4805748	+
R2_LINE_2	Retrotransposons	LINE	LINE	101	28758360	28758460	-
R2_LINE_3	Retrotransposons	LINE	LINE	82	33563168	33563249	-
R3_LINE_4	Retrotransposons	LINE	LINE	83	122051	122133	+
R3_LINE_5	Retrotransposons	LINE	LINE	182	7224449	7224630	+
R3_LINE_6	Retrotransposons	LINE	LINE	182	7240064	7240245	+
R3_LINE_7	Retrotransposons	LINE	LINE	111	17011017	17011127	+
R3_LINE_8	Retrotransposons	LINE	LINE	83	18455082	18455164	+
R4_LINE_9	Retrotransposons	LINE	LINE	107	32794856	32794962	+
R4_LINE_10	Retrotransposons	LINE	LINE	121	40616285	40616405	-
R4_LINE_11	Retrotransposons	LINE	LINE	98	44881394	44881491	-
R5_LINE_12	Retrotransposons	LINE	LINE	88	2735930	2736017	-
R5_LINE_13	Retrotransposons	LINE	LINE	182	6945523	6945704	+
R5_LINE_14	Retrotransposons	LINE	LINE	97	20891613	20891709	+
R5_LINE_15	Retrotransposons	LINE	LINE	111	21151909	21152019	+
R5_LINE_16	Retrotransposons	LINE	LINE	86	25115976	25116061	-
R5_LINE_17	Retrotransposons	LINE	LINE	109	39879517	39879625	-
R5_LINE_18	Retrotransposons	LINE	LINE	107	44885514	44885620	+
R6_LINE_19	Retrotransposons	LINE	LINE	346	100199	100544	+
R6_LINE_20	Retrotransposons	LINE	LINE	90	7487655	7487744	-

Raphanus sativus (v1.0)

ID:

R2_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

110

Start:

4805639

End:

4805748

Strand:

+

>R2_LINE_1

TTGTTTAGTTTAATTTTCTGCAAATCTGCTACTAGTTTATCTCTTGTAAAGTCTGTCAAAAATCTAAAACTTGGTATAATAAATTTAACATTTTACCCAAAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R2_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

101

Start:

28758360

End:

28758460

Strand:

-

>R2_LINE_2

TTTTTTTTTTTTTGGTAAACATGTTAAAATTGTATTACCATTTTCGAGTTTTTGACAGAGGTTACATAGAAATACAAGTAGCGGAAGAACAACAAACTACA

Raphanus sativus (v1.0)

ID:

R2_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

33563168

End:

33563249

Strand:

-

>R2_LINE_3

TTTATCTTTTTTTGGTAAAAATGTTAAGTATTATTACCATTTTCAATTTTTGACAGACGATACATAGAAAACAAGTAGCGGA

Raphanus sativus (v1.0)

ID:

R3_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

122051

End:

122133

Strand:

+

>R3_LINE_4

TGGTTTTATCCGTTATTTGTCTTCTTTGTAACTTCTGTCAGAAAATCTTGGTATAAAATTTAACATTTACACCAAAAAGAAAA

Raphanus sativus (v1.0)

ID:

R3_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

182

Start:

7224449

End:

7224630

Strand:

+

>R3_LINE_5

GTTGTTTTGGTTTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGTACTCTCTGCATTCAAGGTTTTGAGGATGGGCCTTTCTCTGAGGTGCTCGTGGCAACTAAGATGGAGACTCCAGTTTTTCGAAACTGTGGCAACTACACAAATTTCCAGGTTTGGAAGCTTGGAATCGGTGTTTCC

Raphanus sativus (v1.0)

ID:

R3_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

182

Start:

7240064

End:

7240245

Strand:

+

>R3_LINE_6

GTTGTTTTGGTTTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGTACTCTCTGCATTCAAGGTTTTGAGGATGGGCCTTTCTCTGAGGTGCTCGTGGCAACTAAGATGGAGACTCCAGTTTTTCGAAACTGTGGCAACTACACAAATTTCCAGGTTTGGAAGCTTGGAATCGGTGTTTCC

Raphanus sativus (v1.0)

ID:

R3_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

111

Start:

17011017

End:

17011127

Strand:

+

>R3_LINE_7

TTGTGTTTTAATTGTGCTGTATATTTCGGTTTTTCTGTTTTTTTATAATGTCTCTGTATTTCTGTCAAAAAATTAAAAGTTGGCATAAATTTAATATTTTACCAAAAAAAA

Raphanus sativus (v1.0)

ID:

R3_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

18455082

End:

18455164

Strand:

+

>R3_LINE_8

TAATCAGCTACTGGTTTTCTTTGTAATGTCTGTCACAAACTTGAAAATTTGGTATAATATTTAACATTTTATCAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R4_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

32794856

End:

32794962

Strand:

+

>R4_LINE_9

TGTTGTTTAGTTTAATTTCTTGCATCCTCTGCTCCTTGTAACTTCTGTATTTCTGTCTAAAACTTGAAAATGGTAATAAAGTTTTAACATTGTTAACAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R4_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

121

Start:

40616285

End:

40616405

Strand:

-

>R4_LINE_10

TTTTTTTTTTTTGGTAAAATGTTAAATTTTATACCAAATTTAAACTTTTGACAGAGTTTACAAAAATAACAAGTAGCGGAATGCAAAAAAATTAACTACAGGACACAACAAAACGACATTA

Raphanus sativus (v1.0)

ID:

R4_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

98

Start:

44881394

End:

44881491

Strand:

-

>R4_LINE_11

TTTTTTCGGTGTAAATGTTAAATTTTATACCAATTTTTTCTTTATGACAGAAATTACATAGAACACAAGCAGCGGAATAAAAAAAATATAAACAACAT

Raphanus sativus (v1.0)

ID:

R5_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

88

Start:

2735930

End:

2736017

Strand:

-

>R5_LINE_12

TTTTTTTTATTGGTAAAATGTAAAGATATTATTACCAAGTTCTAAGTTTTTGACAGAAATACAGAGATTAACACGAAACGGAAAAGCA

Raphanus sativus (v1.0)

ID:

R5_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

182

Start:

6945523

End:

6945704

Strand:

+

>R5_LINE_13

GTTGTTTTGGTTTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGTACTCTCTGCATTCAAGGTTTTGAGGATGGGCCTTTCTCTGAGGTGCTCGTGGCAACTAAGATGGAGACTCCAGTTTTTCGAAACTGTGGCAACTACACAAATTTCCAGGTTTGGAAGCTTGGAATCGATGTTTCC

Raphanus sativus (v1.0)

ID:

R5_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

97

Start:

20891613

End:

20891709

Strand:

+

>R5_LINE_14

TCTCTGTAGTGTAGTTTATTTTTTTCTGCTAGTGTAATCTTCTGTTAAAAACTGAAAATTGGTATAAAATTTAATATCTTTACCAAAAAAAAAAAGA

Raphanus sativus (v1.0)

ID:

R5_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

111

Start:

21151909

End:

21152019

Strand:

+

>R5_LINE_15

TCTTCTATGGTGTTGCTGTTTATTTCTTCTCCTATTAGTCATCTATTGTAATTTCTGTCAAAAAATCGAAAAATTGGTAATAATATTTAAAATTTTACCAAAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R5_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

86

Start:

25115976

End:

25116061

Strand:

-

>R5_LINE_16

TTTATTTTGTGGTAAAAATGTTAAGTATTATTACCAGTTTTCACATTTTTGACAGAAGGTAACAAAGTAACTAGTAGCAGATTAGA

Raphanus sativus (v1.0)

ID:

R5_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

39879517

End:

39879625

Strand:

-

>R5_LINE_17

TTTTTTTTTGGTAAAATGTTAAAATTATATTACCAAGTTTTTATTTTTTACAGAAGCACAGAGAAAAACAAGAAACAGAGTGCAAAAAGTAAACTAAACAGAACATCAA

Raphanus sativus (v1.0)

ID:

R5_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

44885514

End:

44885620

Strand:

+

>R5_LINE_18

TGTTGTTTAGTTTAATTTTCAGTATCTCTGCTACTAGTTATCTCTTGTAATCTCTGTCAAAAACAGAAAATCTTGGTATAATCAATTTAACATTTTACCAAAAAAAA

Raphanus sativus (v1.0)

ID:

R6_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

346

Start:

100199

End:

100544

Strand:

+

>R6_LINE_19

CGTGTTTGTGTTAGTCTTCGGGGAAGCTGTAGGCTCTATCTGCATTTGAGGTTTCGAGGATAGTGTTGAGTGGTGATGCTCACGACAATGACGATGAGAACTCAAGATTTTGTGATATGTGTCGATAACATAAATGTCCAAACTTTAAGTTTGGAATCGATGTTTCTACATGTTGGATATTCTAGGTTGCTTAGATGTACGTTTTGGTTGATTGTGACCATTTTTTTGGTTTTTGTTGTTATTTTATTTTTAGTTTTATATTTTGTTTACCTTGTTTTTTTTGTGTTCTACGTAACTGTTGTAAAAATTAAAAATTAGTATAAAATATAATATTTTATCAAAAAAA

Raphanus sativus (v1.0)

ID:

R6_LINE_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

90

Start:

7487655

End:

7487744

Strand:

-

>R6_LINE_20

TTTGTTTTTTGGTAAAATGATAAATATCATACAAGTTTTCAAATTTGCAACAGAAATTACAAAGAAATTAGAAGCGGAGTGAAGGATGCT