ID Class Order Superfamily Length Start End Strand View
R1_LINE-L1_1 RetrotransposonsLINELINE-L1811339908340718-
R1_LINE-L1_2 RetrotransposonsLINELINE-L1184353327353510+
R1_LINE-L1_3 RetrotransposonsLINELINE-L11230804662805891+
R1_LINE-L1_4 RetrotransposonsLINELINE-L1197900629900825+
R1_LINE-L1_5 RetrotransposonsLINELINE-L1134410897551091098-
R1_LINE-L1_6 RetrotransposonsLINELINE-L119413968661397059-
R1_LINE-L1_7 RetrotransposonsLINELINE-L1106213977661398827-
R1_LINE-L1_8 RetrotransposonsLINELINE-L1200618717871873792-
R1_LINE-L1_9 RetrotransposonsLINELINE-L181718739831874799-
R1_LINE-L1_10 RetrotransposonsLINELINE-L117618761381876313-
R1_LINE-L1_11 RetrotransposonsLINELINE-L111618785291878644+
R1_LINE-L1_12 RetrotransposonsLINELINE-L1284021132642116103+
R1_LINE-L1_13 RetrotransposonsLINELINE-L138921163752116763+
R1_LINE-L1_14 RetrotransposonsLINELINE-L1337225600842563455-
R1_LINE-L1_15 RetrotransposonsLINELINE-L168925962522596940-
R1_LINE-L1_16 RetrotransposonsLINELINE-L168926057782606466-
R1_LINE-L1_17 RetrotransposonsLINELINE-L162326462542646876+
R1_LINE-L1_18 RetrotransposonsLINELINE-L1135126470702648420+
R1_LINE-L1_19 RetrotransposonsLINELINE-L132226491732649494+
R1_LINE-L1_20 RetrotransposonsLINELINE-L162326621482662770+

< 1 2 3 4 5 > Total 875


Raphanus sativus (v1.0)

ID:

R1_LINE-L1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

811

Start:

339908  

End:

340718

Strand:

-

>R1_LINE-L1_1

TTCCAAACTTCTCTAGAGTATATGCAATCAAAAAATAGATGGTCTCTTGTTTCTATTTCCGAATTGCAGAGCCAACATGTGGATATAGCTTGAGCGTTCCACTTGAGGACTCTATCTCCTGTGGCTAGCCTGTTATGAGCAGCTAACCAGACTATGAAAGAGAACTTTGGAGTGCCTTCTGCAAACCAGACTCCTTTAAACCAGTGAACTTTGGGTTCTTTACTTCTTGTGAGGTTCCATGTGTGAGATGTAAGAAACTCAGGCTTGAAATCACCATTCTCCCTCTTCCAAAGACATTCATCTTCTAAATGATTAAGGCCCCGACTCTTAAGCTTTAAAATCTCCTGACCAATCATCCGAAGAGAAAATACTCTATGCCCTCTTGTTCTGTAAATCTGAACAGCATGCTCCACCGTAGCATTTTTTGGAATACCCAGATCCATGCTTCCTCTTTCACCAATGAACTGCATAAAAGGACCTAAAGCAGACCATTTTTCATACCAGAAAGATGTATCAGCCCCACTGTTAATATACTTTCTAGTCAATTGCATTGCCAAAGGTCTCAACTTCAACAGCTTTCTCCACATCCAAGAACCAAGTGTACTCTCCTCTTTTATACTCCAGTAAGACCCCTTCCTGATGAGATATTTCCAAATCCATTTAACCCACAAAGAAGACCTTGCACTAAGGATACGCCAAATCAATTTCAAACAAGAGACTCTGTTTGCTTCAGATAGATCTTTTAAACCGAAACCTCCCTCATCCTTTGGTTTACATACATCCTTCCACGCCACCTTTGCTTTAGAATTTA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

184

Start:

353327  

End:

353510

Strand:

+

>R1_LINE-L1_2

TTTTCAATTTCTTTTATCGCTAGAGAGCGCAATGTAAGAGCAGACCTTCTTGCAAAGGCTGCTCGGCTACAAAATTCTATCTTTTCCCATGTTGACTCAGACATTCCAGGATGGTTAGCTCACAAAGCAAACCTCTTCCGACTGAATTAATAAAACATGGGGTTCGACGTAAAAAAAAAAAAAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1230

Start:

804662  

End:

805891

Strand:

+

>R1_LINE-L1_3

AGTAAATCTCCGGGGCCTGATGGTTTTACTTCGGCTTTCTTTCGGTCTGCTTGGTCGATCCTAGGAGAGGAGGTGCTCACTGCAATCTCGCAATTCTTCTCCTCGGGTTTCTTGCCAACCTCAACCAACGCTACTATCCTTACCTTGGTCCCAAAAAAGCCTGGTGCTACTTTCATCACTGATTTCCGCCCTATCTCTTGCTGCAACACAACCTACAAGACCATCTCAAAGCTCTTAGTCAAAAGAATAAAGCCTATCCTCAAGAGACTTATCTTGCCAAACCAGACAGCGTTCGTGGAGGGGAGATTACTAATGGAAAATACACTGCTGGCTTCGGAGATCGTCCAGGGATACCATAGGAAAGGGGGTGAGAAAAGAATAACTATCAAAGTGGACATAGCGAAGGCATTTGATACAGTTAGATGGGAGTTTCTTTTCGCCTGTCTGCGTAGTTACCACATTCCAGAGATCTACATCCGCTGGCTTGAAGCATGTGTTTGTACCCCATCGTACTCGATTGCGTTCAACGGATCAACTTATGGCTATTTTAAAGGCAAAAGAGGGCTGAGGCAAGGAGACCCGCTTTCTCCCTACCTCTTTGTGCTGGTAATGAATTGTCTATCTATGGCTTTAGACAAAGCGGCGGTAGAAGGGCAGTTTCATTATCATTCTCGTTGTGGAAGATCAAAACTTACGCATCTCTCCTTTGCGGACGATCTCCTCATCTTCTCAGATGGCTCTCTCTCTTCTGTTCAAGCCATCCTCCGAGTGCTTACTGACTTCGAAAATCGTTCAGGTCTGGCCATAAGTGTACAAAAATCATGTTTCTTCGCGGCAGGGATGAGCGACTCTGAGATAGAAGAAATAACCCACCGGACGGGCCTCTATACTGGTGTCTTCCCCATCCGGTACCTAGGAGTCCCTCTCCACACCAAAAAAATCTCTCACATCCAATGTGCCCCCCTGATCCAATCCATCAAAAATAAGCTTCGGTCTTGGACGGTAAGATGTCTATCTGCTGCAGGGAGGCTCCTTCTTATCTCCTCTGTTATAAATGGCATTACCAACTTCTGGACAAGCTCTTTTATCATTCCAAAATCTGTCATAAAGGAGATAGACTCGATGTGCGCAAAATTCCTATGGAAGGGAGACATCGCGGCTCAAGCCTCAGCAAAGGTAGCATGGGATTCTTGCTGTCAACCAAAGGATGAAGGAGGGTTGGATTTGAGG

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

197

Start:

900629  

End:

900825

Strand:

+

>R1_LINE-L1_4

GGTGGACTTGGTTTCCGGGACATTCAGATCTTCAATGATGCACTTCTTGCAAAAATTGGCTGGAGGCTAATTAAGGAACCCCAATCTCTTCTGGCTCGTGTTCTACTGGGGAAATAGGCGCACAACTCCTCCTTTATGGAATGTGATATTCCGAAATCTGCTTCTCACGGTTGGAGAAGCGTTATCGCAGGCAGGGA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1344

Start:

1089755  

End:

1091098

Strand:

-

>R1_LINE-L1_5

CTCATTCTCAAAAGTTTCACGCAACCAAGATGGGCTTCCCGTCGCGACATACGACTGTACAAGTCCACCTTTCGTTACACTCAGAGCAATGAGGAAAGCTCCTCTGTTATTTGCCCTTTCTTCCTTCACTCATCTCCACCAGTCAATAGTCCTCAAATTTCTTAAGATCCTAGAGCTTTCTCCTTTGAAATTTGGCCATGCTTTTGGTCTCAAAATCATCCCTGTTAGATCAGTATCTTCAGTGGCGAAGATCACTCGTTTTAGATGATGAGCACTCATACTTTCAATAGACCATAACAAGGACTCCAATTTAGCTTCATGCAAAGTCTTAATCTGAGAAAATGCTTTTCTGCTATGCATGAGAACTTTACCATTGTGATCTCTAACGACCCAAGCACCTCCTCCTATTTCCGTTGATCTCTGCCAGTCCGCTCCAATGTTACATTTCACCCAACCTCTCGGCGGCGGCGACCATCTTTTCGCTCGTTCCAGCAGGTCCGCTTGCTCTTCTACCTCCTCTCTCCGATCGTTGAGCTGCGCTAGTGACCACATCTCCGCTTCTTCAAATGTCTTAGCCACCAAATCCAACATGTTGACCTGTTTCCCATCAAACAAAAGACTGTTTCTATTTTTCCACAGAAACCAAACAAGCCAAGGCATTGCCTTTACCACTTGTAAGGAACACATCTTGTTAGAGCTGAGAGAAAACAGGAAGTGAAAATTGGAGTAGTGTGACACCTCATCGAATCCATTGAGAGGAGAGGGGACATTAGCCAAAGCTCATACTTGCCGCGCAATGGGACAGGTGAATAGGATGTGATTTATAGATTCACCTTGAAACCCACATGCTTGGCAGCATGGATCCATCTTAATACCTCTCTTCACCAAGAGCTCTCCCGCTGAAATAGCGTTACTTAAGGCTCGCTAGAAGAAGTTTTTGATTTTAGGCGGGGCTCTCAACTTCCATGCTTCTGATTTCAAACCATTTAAAGAAGGCAGAGCTTCCGCTTCCCTAATTTCCTCACTCCTTGTCAATCTGTTTTTCAACCAATAACCAGACTTGACTGAGTAACCCCCATGCTTATTATGTTTCCACACCCAAAAATCCTCCTCTTCGAAGACCGGTTTCATTGCTACAATTCTTGCGATATCCTCCTCAAAGAATAGATCATGTAGCGTATTCAGGTTCCAGCATCTGGTTTCCTGGTCAATCAGTTTATCCACACAGAGAAGAAGGTCAACAAAGATATTTTTCATTAAAGGTCTTCTCATCACTTCTCCTTCAATCCACGCATCCACCCACACCGACACAGTTCTGCCATTACCGATCTTTTTAGTGATACC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

194

Start:

1396866  

End:

1397059

Strand:

-

>R1_LINE-L1_6

ATTCCAAAAGTCCATAGAAAAAGAACAAGCAAAGAACAAATGATGCATACTCTCATCAGCTGAATCACACAAAGGGCACAACGGAGTAACATCCAAACCCCACCTTCTAAGCTTATCCCGTGTCGGCATTCTATCACGAGCAGCAACCCAAGTGATGAAAGAATGTTTTGGGATATTTCCTGAGAACCAAACCG

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1062

Start:

1397766  

End:

1398827

Strand:

-

>R1_LINE-L1_7

CCAAAAATTAAAAATGCTGTACAGGACAGATTTTATTAGCTGAAGTCTCCCCGCGAATGAGAGCTGTCTGTAAGTCCAAGAAGAGATTCTTCTGGTAACCTTATCAATCAAGGGCTGATAATCGTCTCTTTTCATTTTATTTGGCATAAGAGGCAATCCCAAATACTTCACAGGAAGAGCTCCATAAGCTAAGCCAAATCTTTCTGCCATCTCTTTCAAAATGACTGCATTCCCACCGTCTAGAAAGAGAGACGATTTGCCCAGATTTAGACCCAATCCCGAGCTTAAATAAAACGAGTTCAGAATGGCAATGATTCGTTCCAAAGACTCTGATTCACCATTAAAAAATATGAGCATGTCGTCAGCAAAGCTGAGATGGGTTACTAGAGGATCAATGGCTCTAGGATGAGGGAGAAACTGGTGCTGCAGAGCGGCTCGATCTAGTTGCTTAGCCAAAATGTCCATGGCAATAACGAACAGGGAAGAGGAAATGGGATCTCCTTGGCGAAGCCCCTTTTTCCCCGGAAAAAACCCAGCAAGCTCCCCATTTAAAGCTATTGAATAGTGAGGAGAGGAAACACAAACCCGAATCCAATTCTGGAGATTTGATGGCAGCTCAAAGGCTTCCAAGATGTTGAAGAGAAACCGCCAGTCCACATTATCATAAGCCTTCGTGATATCTATTTGCAGACAACCTCTGGTAACATTCCCTTCTTTGTTAAAATCTGAGACGAGCTCTGATGCAAGGAGGACGTTCTCAGTAAGTATACGCCCTTTAACAAAGCCGACCTGGTTCCGTTGAACAATCTTTGGGGTTAATTCCTGCAGACGAGAGGCAATCAACTTGGAGATAACTTTGTAGACGGTATTGCACAAAGAGATAGGCCGGAAATCTGAAAGCTTATCCGCAGCTGGAACTTTTGGGATTAAAGAGATAACGGTTGCATTCACCTGTCGAGGCAGAACCAAGGTAGTGAAAAAACTTTTAACAGCTGATATAACATCTGAACCCACCAGATCCCAAGCTGAAGTGAAAAACTCAACAGTGAAGCCATCAGGCCC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2006

Start:

1871787  

End:

1873792

Strand:

-

>R1_LINE-L1_8

AGAGAGCTAGGTATGATCAGTCTGATCTTCTCCTCATAATGAGGTAAATGTAGGCGGATTTTGTCTAGGTCCCACTCATTCGTCTGAACGACCAGCAGGTCAGCCACCAGAAGATTTCTGTTGGCGAAAGAGGGTGGCCCTATAGGCGCTTCAGGGCTCCAAGGGGATAACCATTTGTCTCGCCAGACATTGATACTTTCCCCATTGCCTACAATAAATCCAAGGCCTTTTTCAATGACCTTCTTACCAGCCAAAATGCTGGTCCAACCATGAGAAGATTCTGATTTTTCTTCACTCTCCATGAAGGAGCAATCAGGGAAATATTTCCCTTTAAGGACTTGAGCAAGAAGAGAATCGGGATGGTTATGGATTCTCCAGCTGAGTTTAGCCAGAAGAGAGTCATTATACCCCTCAATGTTCTTGAACCCGAGCCCCCCTAGGCGCTTAGGTTGTGCCATAACTTCCCAAGCTACCCATGCTATCTTTCTCTTATCTGGGGCACTGTCCCACCAAAAACGGGTTAGTATGGACTGAATGCGCTTACAGAGAGAGATTGGGATTTTGAAGCTTGACATAGAGTATGTCGGAAGGGCTGTCAGCACCGATTGGATCATAACATGCTTCCCCGCACCTGAGAGGAATCTTGTTGTCCATGACTGCGACCTTTGTCGGATCTTGTCCACCATTCCTGTGAACACATCTTTCTTACTTCTTCCAAAGGACTCCGGTAGGCCTAGATATTTTCCCATACCCCCCTCCTGTTCAATACCCAAGTCTGATTTTACACGATCTTTAATGCTCTCAGGAGTCTTCGATGAGAAGGTAACTGTGGACTTGCTAAGATTAATACTTTGTCCCGAACTGAGCTCGTACTCCCGCAAGATCCTACTTAAGACTCTGCAGTTCCTCTCATTTGTCTTGCAGAAGAGCATCGTGTCGTCCGCAAAAAGGAGATGATTGACATGCGGGCTTCTCTGTGCAACCTGGAGACCAAGAAGACTGCCGTTTCTCTGTGCATTCTTAAGGAGTCCTGAAAGAACCTCCGTACACAGTATGAAGAGGAAGGGTGAGAGCGGATCCCCTTGACGCAGGCCTCTTGACGGGATCACTTTCCCGAGTGGTGATCCGTTTATCAGAAACGAGTATGACACCTTGGTAACACACTCCATGATCCATTCCGTCCAGATAGCGCGAAATCCCATCTTAGTCATCACCTTCTCCAAGAAGCCCCATTCTATCCGGTCATAAGCCTTGCTCATGTCCGTCTTGACGACCATAGAGCATCTTTTTTGTGCCTCCGAGATCTTCAGATAATGAAGAGTTTCATGTGTGATCAACACATTATCCTGAATGGCTCTTCCCGGGACAAAAGCTGTTTGGTGGCTTGAGATCAAAGAAGGTAGAATCTGCTGAAGTCTATGCGTCAGTATCTTCGCGATGATTTTATATCGCACATTGCATAAAGCAATTGGGCGATAATCAGCTGCTGCCTTTGGCGCTAAGGTCTTTGGGATCAAACAGATATGAGTCCCCGTGATTTGAGGGTTTATGGAACCCGACGTGAAGAACATCCGAATTTCTCGGTAGATATCAGACCCTAGCAGATTCCAGAAGGACTGGTAAAAGCTCGCAGAAAAGCCGTTTGAACCCGGGGCTTTGTCTGCATGGATATCAAAGATAGCAGCTCTTACTTCTTCTTCCTCGGGTATACAGCAGAGCATATCGTTCATCTCCTCTGTGATAGATTCTGAGATTGTATCTTCCACAGTGTGGTAGTCGGAATGCCCATTCGCGGTGAAAAGATTTTTGTAGAAGTTCTCGAACACCTTACTTATCTCCTCTTCCTCATGCACTGGGATTCCTTCCTCATTTTCGATTGCTGAGATACAGTTTCTCGCCTTTCTTCCTTTTGTTACCGCATGGAAGAAGGCACTGTTCCGGTCTCCACCCTGAAGCCATAAGATTCGGCTCCTCTGCCTCCAAAATAGCTCTTCTGCTTTGTAAGC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

817

Start:

1873983  

End:

1874799

Strand:

-

>R1_LINE-L1_9

TTCCAGGCCGACTCGATTATAAGACGTGCCTCTTCGATGTCGTTTAGTCGGCGATCATACCAGAAAGGTCTTCTCTGTTTCCATTTTGTGGTGTCCAAATAAGTCATAAGTGGACGATGGTCCGATCCCTCAAAACGGAGGTAATGGCAGCAGCTGGCAGGGAATAAATCAGACCAGGCTACATTAGCCAGGGTTCTGTCCAGCCTTTCCTGGATATCGTGGGTATGTCTCTTGCCTCTCCATGAAAGCTGAATCCCTGTATGTTTTACATCCCATAGTCCATTCTCCGAGACAAAACTTCGGAAGGGGATGAATGAACCCTCACATCTTGTTGGGCCTCCCTCTTTTTCTGAGTTCTCCAAGATATCATTGAAGTCACCAGTTAAAGCCCAAGCTGAATCTCTCCCTTGGCCCAGACTAGAAATTTCTTCCCAAAACGCGGCTCTGTTTTCCTGCTGAGGGGTGCCATAGATGAACGTTATGTAGAATGAATTCTTTTTATAGATCACATGTGTATCAATGAAGTGCGGGGAGGAGTTTAGCACTGTGAGATCTATTTCATTCTTCCACAAAAGGGCCAAGCCGCCGCTTAGCCCTACTGGTGGTACAAGGAAATAATTTTTAAACTCTTGAGTTTGGAGAGTTGAAAGTACAAATGCTTCTTGATTTTTTGTTTCCATGTAATACATAATATCCGGAGCTTGAACATTCCTCAGCTCTCGGACTCTTGGAACTGTCAATTCTCCCCCTAGTCCTTGACAGTTCCAACTCAATACAGCTAAGGAATTTGGTTTGGCGGATCTTGAAAATCCACCCT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

176

Start:

1876138  

End:

1876313

Strand:

-

>R1_LINE-L1_10

TCCAGAAGTGTAAGGGGAGCCCGTGGATTCTGATCCAGAATGCAATCATCCTAGGGAATGAGTTTGAGACTACAGGTTCCCATCGTTGGAGAAGGATCATCCATCTCTTGTAGTGGTAGGGTCCTTTGCGGAGGACTGCTTGCAGCGCTTTCTCGGAAGTGAAGCGGATCTGGAAG

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

116

Start:

1878529  

End:

1878644

Strand:

+

>R1_LINE-L1_11

TGGGCGCCTTCTGTCTGGTTTAAAGGTGCTGTTCCACGTCAATCTTTCACTCACTGGGTAGCTCAGTATGATCGGCTCCCTACAAGGGAAAGGTTGGCGAGTTGGGGTCTACAGGT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2840

Start:

2113264  

End:

2116103

Strand:

+

>R1_LINE-L1_12

ATGAACGTTGTTGCGTGGAACTGCCAGGGCGTAGGTGCTGAATTTACAAAGGAGCACCTCGCGGAACTTTATCATTGCTTTTTGCCTAGATTTCTTTTTCTCTCGGAAACAAAAAATTATCGGAGTGTTTTGCAAGATGTGCAAGTTTCTTATGGATTTGATCATGTTTTTACGGTTGACCCGGTTGGTCGGAGTGGAGGTTTAGCTCTTTTTTATATGAATGACCCATCTGTTACTATTTTATATGCGGATAAAAATATGATTGACATCGAGACACGACTTGAAGGAAATCCAATTTATATGACCTTCGTGTATGGTAACCCTGTAGTAAGATACCGCGACCAGGTTTGGGAACGGTTGTCTCGCATGGGTACTACACGGTCTGGTGCTTGGTTTATGATTGGAGATTTCAACGAAATTACAGGTAATCATGAAAAGAGGGGAGGAAGACGTCGCTTAGAAAGTTCTTTCCTCCCTTTCCGTACTATGTTAGATAACTGTGGAATGCTGGATTTTCCTTATAAAGGGAATTCATTTTCATGGGTGGGCAAGCGACGATCCGGGAAAGTAAAATGCAAACTCGATAGAGCAGTGGCGAACGAAGAATGGCATGCTTTATTTTCTCACTCAGTTGTAGAATTCCTACAATTATGGGGTTCGGATCACAGGCCAGTCCTTGCTCGAATTCAAACTAGGATCCGAAAATCTACAAAAAATTTCCGGTTTGACAAGAGATGGATTGGAAGACCAGGTTTCAAGGATGCAGTTACTTCGGGGTGGGGATCTTTTGAAGAAATTCCAACCAGGAATTTTCATCAAAAAATTACCTCATGCCGTAAGAAGATTTGCCACTGGAAAAAGCAAAATCCTACAAATTCTGCTATACTAATAAAAGAATTGAAGGCTAAAATTGACTTAGCACAAGACGAGGATTCCACCACGTCAGAGGAACTAGAGGCCCTGCAAAGACAGTTATCCATGGCCTTTAAAGAAGAAAATACCTACTGGGAACAAAAAAGCAGGAATCAATGGCATAAACATGGTGACAGAAATACAAAGTTTCATCACTCTACTACCAAACAAAGGAGAGCCCAAAACCGGGTCATTAGTATCAAAGATAAAAATGGAAAGCTGGTGGAGAGCGAAATCGAAGTTGAGAACGTAGCTGTTCAATACTTTCGAGATCTTTTCTCCACCTCTCTGCCAACACAGATTGATACTTCTCTTCGGTTTATTTCCGAAAAGGTGTCTAGTGATGACAACAGATTTCTATTAGAAGAACCCTCGGAAAAAGAAATTAAAAAGGCTCTCTTTGACATCAATCCGGATAAAGCACCAGGACCCGATGGCATGACTAGCAAACTCTTTCAGAAGTTTTGGCGAGAGATGCGGCAAGACATTATCCGTCTTGTCCGGGATTTCTTTGCCACAGGGAGTTTTGACCCTTTGATAAATCAGACAAACATTTGCCTCATCCCAAAAAAAAAGAAACCTCGCGACATGACAGAATTCCGACCTATCAGCCTTTGCAATGTCAGCTATAAAATTATTTCCAAGCTTCTTTGCAAGAGACTCAAGAGGGTTACCCCGAATCTGATTTCGGAGACACAATCAGCCTTTGTGGCAAAGCGTTTGATCACTGATAATATTCTGATAGCACAAGAAAACTTCCACGCCTTACGAACGAACCAAAGGTGCCGTGAAGATTTTATGGCAATAAAAACAGACATGAGCAAAGCTTATGATCGAGTGGAATGGAGCTTCCTTGCCTCTTTAATGATAAAGATGGGCTTTGATGAAAGATTGGTTGATCTCATTATGTGTTGTGTCACATCGGTCTCATATCAAGTCTTAATCAACGGCCAACCGAAAGGAAGGATTCTACCTAGGAGAGGTCTAAGACAAGGAGACCCTCTCTCCCCGTTCTTGTTTATCATGTGTACGGAAGCCTTGATCTCACTTTTGAATGGAGCGGAAGCGGAAAATAAATTAACGGGACTGCGTGTTTCCCATGCAAGCCCAAGGATATCTCACCTTCTATTTGCGGATGACAGTCTCTTCTTTTGCAAGGCAGAGACGAGCCAATGCAAAGAGATTATAGACAATCTTGAAATTTATGGGAATGCATCAGGACAACGACTGAATGTGGCGAAATCTTCGATGTTTTTTGGGAACCGAGTGGAGCCCTCTCGGAAGCAAGAAATAAAAAATGTTCTAGGCTTCTCGACCGAAGGGGGTATGGGGATGTACCTTGGCTTACCAGAACATATCGGAGGTTCGAAGATGAAGGTTTTCTCCTTTGTACAAGACCGGTTCAATGGACGGGTTAATAATTGGTCATCGAGACTCCTTTCTAAAGGGGGAAAAGAAGTGCAGATAAAAGCAGTGGCACAAGCTGTCCCGACTTACGTAATGTAGTGTTACTTGCTTCCACAAGGCATTACCGACAAACTGAAGAGTACTACGTCAAATTTCTGGTGGAGCTCCAATCAGAACAGCAGAGGACTACATTGGATTGCATGGGACGAGATCTGTACCCCCAAAGATTCGGGGGGACTAGGTTTTCGCGATTTCCATGACTTCAACTTAGCGCTTCTTGCGAAACAATTATGGAGACTGATCCACTACCCAAATTCGTTGATAGCAAGGGTTTTAAAAGGGAGATACTACAGACATACCTCCCCACTTGATGAGCACCAGACTTACTCACCATCTTATGGATGGCGTAGTATCATGGCTGCAAGACCCCTTCTCACTTTGGGCCTACGAAGGACGATCGGCACGGGTGGTGACACCAGGGCTTGGACTGATCCTTGGGTCCCAGATATAGTTGCACGAGC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

389

Start:

2116375  

End:

2116763

Strand:

+

>R1_LINE-L1_13

GAACCGAGTCTAACGGGCTTTCAGAGCCATGTATGGAAGATTAAGGCTCCAAATAAAATCAAGCATTTCTTGTGGCAAGCGATCTCCGGCTGTGTGGCTACGGCGGAAAGACTCACTTATAGACACCTGGGCACCGATAGGAGTTGTCCTAGATGTGCTGGCCCAGTGGAGTCAATTAATCATCTTCTTTTTGAGTGCCCTCCCGCCCTTCAAGTTTGGGCTTTGTCGGACTATCCGTCCCTTCCGGGTTACTTCCCGAGTACATCTATCTACCAAAACTTAAACTTCCTTTTTTGGAAGCGAAAAGAGGTGGCTCCGTCGAGACCACAAGTCGATACCTTCCCATGGATCTGCTGGTACATTTGGAAGGCCAGAAACGATAAGGTTTT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

3372

Start:

2560084  

End:

2563455

Strand:

-

>R1_LINE-L1_14

GGAATGGATTCCCACACTTCCTTGGCGTAGGGGCAGGTAAAAAAAATGTGGGTTTTGTTTCCTTTTCTTGGCATCTGATACATTTGACATCCGGTCCCATTCCTCGCTTTTGTAGGTTTTCCCCTAACGGCAGGGCGTCTCGTAGTATAGACCACACAAACATCTTCATCTTGGGTGAGAAAGAGCCGCTCCATACGTCCTTCACCCAGTCAAAGCCCCCTTGGGTTGCTTGTACTGCAGTAGATGTAGCTGGTGTTGCAACAGAGTTATATCCTGAGCGTGTGGAGTAAACCCCCGATGGCAGTGGGAGCCAGATGACTGAGTCTTCCGCTCTGCTCTTACTTGGGTGGATGCATTGGATTTGGGAAGCGAAGTCAGGTAAAAGCTCCTCCAATCTTGCTTTATTCCACTCTAGTTCTGAGGTTAATAGGTCTGCCACCATTAAGTCTTGCACTGTTTCTTGGATCGGTCCATAGGGTTTTAGGGATGTGTCGGTAGATATCCACGAGTCTCTCCAAACGTGTGTAGTATTTCCGTTCCCTATGGCCTTTCCTAAGTTGCCTTGTAGTAGATCTCTTCCTGCTAGTATCCCCCTCCAGCCGTGAGAGCAGGACCCAGTTGGTGATACCTTTAGGAAACTTTGCTTATGGCAGTATTTCCCCAGTAGAACTCGTGCGAGTAAACAATTAGGGGCCGTTAGGATTCTCCATGAGATTTTTGCAAGGAGTGCTAGATTGAAGAGTTGTATATCTCTGAACCCTAAACCTCCATTACCTTTAGGTTGAGTTAGCTTATCCCAAGACACCCAACACATCTTTCTTTGCCCTTGCGGTCCATCCCACCAGAATCTAGTTAGTACTGACTGTATTCTCTTGCACAGGCTGACGGGAAGCAAGAAGCAAGACATAGGATAAGTTGGTATTGCAGTGAGGACGGATTTTAGCATTGTCAGTTTCCCAGCCCTTCGACAGAAACCTTGTTGAGAGGCTTAGGGCTCTCTGGCGGATTCTATCCACTATAGACGTGAAGAGGTCTCGCTTTCTTCTCCCAAAATGTTCAGGTAAGCCTAAGTACTTCCCCACTCCTCCTTCTTTACTTATTCCCAGAATTGATTTTGCTTCCTCTTTGATTATCGCAGGTGTTTTGGATGAGAAGGTGATGGATGATTTAGCTCTATTAATTTGTTGCCCTGACGCTTCCCCGTATCTGGAGAGAATCTTCACTAATGTATTGCAGCTCGTTGCAGATGCTTGGGTGAAGAACATAGTATCATCTGCAAAGAGCAGATGATTGATGCGTGGACATCCTCTTGCTACTCTTATGCCTTGGAGAGAGCCATCAGCTGCCGCTTTCTTGCAGAGTCCCGACAGCACCTCTCCGCAGAGGATAAAAAGGTAAGGGGACAGTGGGTCTCCCTGCCTAATCCCTCTCTCTGGTTGAACTTCTCCATAGCTTTCCTCGTTTACTAGGTAGGCATAGGTTACAGTAGTAACACACTGCATTATCCAATTCGTCCAAATATCATGGAAACCGAGTCTTTTTAGGACATTAGCTAGGAAACTCCACTCCACTCTATCGTAGGCCTTTGACATGTCAGTTTTGACTGCCATTGTGCACCTCTTCTCTGCCTTAGATGCTTTTAGGAAATGTAGTACCTCGTGGGTGATCAAAACGTTGTCTGAGATTGCCCTATCTGGGATAAACGCTGATTGATGTTCAGAGATGATCGAGCTTAGGACTGGTTTAAGTCGTAGAGACAGCAGCTTTGATATGATCTTGAAATAGACGTTGCACAGAGCTATAGGTCGATATTCCTCTATCTTTGCAGCTGTAGTTGTCTTCGGGATCAGTCTAACAAAAGTTTTGTTCATTGATGGATTTAGGTACCCGGTGATGAAGAACAGTTGGATTTCCTTTGCCACTGCATCTCCCACTATCTCCCAATTGGATTGAAAGAAAGAAGCAGAGAAGCCATCCGGGCCTGGGGCCTTGTCAGGATGGATAGCAAAGGTAGCCTCTCTTATCTCATTAAAGGAGGGGATTTCTATAAGCTTCTCATTTTGGTCTTGTGTGATGCAGGGTTGGAGAGCATCATCTACCGTGTCTTTGCCATCCAAATTGTTTGATTTGAAGAGATCAGTATAGAAGTGGCAGATCACTTTCGCTATCTGTGTTTCTTCGTAAACAGGTAATCCATTCCCATCTTCCACTACTGTCATTCTGTTTCGTGCTTTTCTCCCTTTAGTGACAGAGTGAAAATACCCAGTGTTTGAATCTCCCAAAGTTAACCACATTTGTCTGCTTCTTTGTTTCCAAAAATCTTCTTCAGACTTGTAAGCGAGGAGGAGTTTCTTGTTGATTTCATGGATTAGTACCTCATCTGCTATTGGGTTTGCCATAGCGTTCTCCAGTTGTGCCTTAAGAAGATCCATTGCCTTTCTGCTACTCTCCTGGTGGGCTTTACTCCATTTCACAATTGCTCTTCGACACAAGATAAGTCTTTCTTCAACTTGGAGTGACTGTGACTGCAACCAAACTTCATTGATTATTTGTTTCACCTCCATGTTTTCTCTGAGTCTCCTATCGTATCTGAAAAGTTTGCTGCCTTTTTTCTTTGTCGCATCCAGGTAGGAGATTAGAGGACGATGGTCTGACCCCTCGTACTTCAGATAGTTGCTTCTGCAGGAAGGGAAGAGTTCTATCCACTCACTGTTGCTGATTGCCCTGTCGAGTCTACACTGAACCAGGTGTGTATGTCTTTGACCTCTCCACGATAGGAAGCTGCCTGAGTGTTTTAGGTCAAATAGGTCATTGTGAGATAGAAATGATCGAAATGCACAGAACGTGCCTTCGGCTCTTTCTGGTCCGCCACATTTTTCGCTATTATCTATGATTTCGTTGAAATCGCCTGTCAGTAGCCATGGCTCTCCTTGAGTAACTTGTAGATTAGTTATCTCATTCCATACTGCGTGACGTTTTGTCTGATCAGGCTCACCATACACGAAAGTAGCATGGAAACTGACTCCCTTATAGATGATTTTTGTATCTATGAAGTTCTTTGTTGCGTTTAACACTGTGAGCTTGATGTCAGGTTTCCATGTCAAGAAGAGACCTCCACTTCCTGGCGTCTCTGGTGGGACCACGTAGTGTTGGTCAGGGTGTAGCCAATCCATTTTTTCCAAGACTACATCAGTGGGATTTTTGGTTTCCATGAGGAAGAAGATATCAGGAGCATTACGCCGGTTAATCTCCTTCAAGCGCTGGATTGTAATGGGATTCCCCAACCCATTACAATTCCAGCTAGCTACGACTAAGGAGCCGGGTGTGGAGAGGCCCGAAAATCCGAGCTTCTCTTAGTCCTTGCTGGAATGA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

689

Start:

2596252  

End:

2596940

Strand:

-

>R1_LINE-L1_15

TTTCTCAAACAATTTGGAGAGTACTTCCATGATCATAATAAAGAGGTAGGGGGAGATGGAATCACCTTGACGAAGACCTTTCTTCCCCGCGAAGAACCCTGCGAGTTCACCATTAATGGAGACAGAGAACCTTGGGGAGGTCATACATTCCCTGATCCAAGTGATGAAGATCGGTGGAAAAGACTGCGCCTGTAGGAGCTTGATGACAAAATCCCAACAGACTGTGTCGAATGCCTTCCGGACGTCTACTTTGATGGTGCAGCTGTGCTGGCAACTTGCTGAGTTATAAGATTGAATCAGTTCTGTCGCTAGAAGGACATTGTCTCCCAAGCTTCTGCCCTTTAGGAAAGCTGACTGATTCGGACTCACACATGACTGCAGTAGAGGCTTGAGTCTGTTGGTAATTATTTTTGAGATCACCTTGTAGACTATGTTGCAGCAACTTATCGGTCTATAGTCACCGAGTCTGCATGCTTCAGGAGTTTTAGGTATCAAGGTAATGGCCGTTGTATTTAGGTCTTTCAGGAGACGACCATTCCTGAAAAACTCAGTGACTGCATTGATAACATCCTGCCCAACTGTGTCCCAAGAAGCTCTGAGAAATTCAACACAATAACCATCAGGACCGGGACTCTTGTTTAGCGGCATTGAGAAGACTGTGGCTCTTATCTCAGCCGCTGTAACCTCTC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

689

Start:

2605778  

End:

2606466

Strand:

-

>R1_LINE-L1_16

TTTCTCAAACAATTTGGAGAGTACTTCCATGATCATAATAAAGAGGTAGGGGGAGATGGAATCACCTTGACGAAGACCTTTCTTCCCCGCGAAGAACCCTGCGAGTTCACCATTAATGGAGACAGAGAACCTTGGGGAGGTCATACATTCCCTGATCCAAGTGATGAAGATCGGTGGAAAAGACTGCGCCTGTAGGAGCTTGATGACAAAATCCCAACAGACTGTGTCGAATGCCTTCCGGACGTCTACTTTGATGGTGCAGCTGTGCTGGCAACTTGCTGAGTTATAAGATTGAATCAGTTCTGTCGCTAGAAGGACATTGTCTCCCAAGCTTCTGCCCTTTAGGAAAGCTGACTGATTCGGACTCACACATGACTGCAGTAGAGGCTTGAGTCTGTTGGTAATTATTTTTGAGATCACCTTGTAGACTATGTTGCAGCAACTTATCGGTCTATAGTCACCGAGTCTGCATGCTTCAGGAGTTTTAGGTATCAAGGTAATGGCCGTTGTATTTAGGTCTTTCAGGAGACGACCATTCCTGAAAAACTCAGTGACTGCATTGATAACATCCTGCCCAACTGTGTCCCAAGAAGCTCTGAGAAATTCAACACAATAACCATCAGGACCGGGACTCTTGTTTAGCGGCATTGAGAAGACTGTGGCTCTTATCTCAGCCGCTGTAACCTCTC

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

623

Start:

2646254  

End:

2646876

Strand:

+

>R1_LINE-L1_17

GATCTAAACTTCAGAGGCACCACATACACATGGTGGAACAAGCAAAAAAGCTCTCCACTGGCCAAGAAGCTTGATAGATGTCTAGTCAATGACAACTGGTACAACGCGTTCCCGTCATCAGTAGCCTTTTTTGGAAGTCCGGACTTCTCTGATCACGCTGTCATAGCTATCACGTTAGAGCCGGACAGGATAAGAGCTAAGAAACCCTTTCGCTTCTATAACTTTATTCTTCAAAATCCAGATTTTATTGCAATTGTCTGTGCTGGCTGGTTTTCTCTCAATGTGACAGGTTCGGCCATGTACAGAGTTGCGGTTAAGCTCAAGTTGTTGAAGCAAACAATCAGGGAGTTCAGCAGACAAAACTACTCCGGGCTGGAAAAGAAAACTGCGCAAGCTCATGAGAAGCTGCTGCAAGCTCAGCAAGTGATGCTCTCCTCCCCGTCAGTCACAAATGCAGAAACAGAGATTACAGCTCTCCACGAATGGGAAGAATTGTCAGCAGCGGAGGCTGCTTTTTTCTATCAAAGGTCGCGTATAAATTGGTTGGCATTGGGTGATGGTAGCTCCTCGCTTTTCCACAGATATGCAGCATCCAGGCAGGCTTACAACCACATCCATTTCCT

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1351

Start:

2647070  

End:

2648420

Strand:

+

>R1_LINE-L1_18

ATCAAGGAAGCTTTCTTCACCCTGCCTAAGAACAAAACGGGTGGTCCAGATGGTTACTCTGCGGAGTTCTTCACTACTTTGTGGTCTGTTATTGGCCCCGAGGTCACCGAAGCGATACTAGAATTCTTTAGAGCAGGGAAGCTACTAAAGCAGTGGAATTCGGCAAACCTGGTCTTAATTCCAAAGAAGCCGAACGCCTCACTACCATCCGACTTTAGGCCCATCTCTTGCCTAAACACGGTCTATAATGTCATCTCAAAACTGTTAGCTGCGCGTCTCAAGGACATACTGCCTCTCATGATATCAAAAGCACAGTCAGCCTTCCTCCCAGGACGATTACTCGCTGAAAATGTACTCCTAGCAACAGACCTCGTCAACGGCTACAACTCACAAAGCATCTCTCCTAGGGGAATGCTTAAGGTCGACCTTCGGAAAGCTTTTGATACTGTGCGTTGGGACTTCATTCTGGCTTCTCTAAGGGCACTAGCGATTCCCGAAAGCTTCATCTCTCTCATCCAGGAGTGCTTATCAACAGCTTTTTTCTCTGTTTCTGTCAACGGACAGTCGGGTGGATTCTTCAAGAGCACTAAAGGGATCCGTCAAGGAGATCCCCTATCTCCGTATCTGTTCGTATTAGCCATGGAATGTCTGTCTCGTTTGCTTCTCTCCCGCTATGAGTCAGGCTCCATTGGTTATCACCCCAGGACAGAAGAATTGAAGATCACACACCTCATGTTTGCGGACGATGTGATGGTGTTCTTTGACGGTTCAAGTAATAATCTTCATGGTATCTCCGAGTGTCTGGATGACTTTGCGTCGTGGTCGGGTCTGCATATGAATGCTACAAAAACGGAGCTATTCACAGCGGGGGTGGACCAAAGTGAAACCGCGGTTATGCGTAACTATGGTTTCCCGTCTGGTCAATTCCCCATTAGATATCTGGGTCTTCCACTAATGTCGCGGAAGCTAAAGATATCTGAATATGCTCCTCTAATGACCAAGCTCAACCTCAGCATCCAATCCTGGTCCGCAAAGCTGCTTTCTTTTGCAGGGAGGTTGCAACTGATCAAAACGGTGATTTTCGGTACAGTAACGTTTTGGACCTCAGCCTTCATTCTCCCAAAAGGGTGCATCAAAACCATTGAATCACTCTGCTCCCGCTTCTTATGGGCTGGTAGTTTGGAGAGCAAGAGCTTTGCTAAAGTCGCGTGGTCAACCGTTTGCCTCCCAAAGGAGGAGGGAGGGCTCGGGATTAGGAGCTTCTTAATTTGGAACCAGGTCCTCTGCTTGAAGTTCATCTGGCTACTACTATCTAAAGCTCCCTCTTTGTGGGTTGATTGGCACTACAGCA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

322

Start:

2649173  

End:

2649494

Strand:

+

>R1_LINE-L1_19

AAGCTAGCGTCGCAATCAGTGGTGTACCATTTGTGGAAGCAGAGGAACAACTTGATACACAATCAGATATCACTACCGCCTGCTACTGTCTTCCGAAACATTGACAGAGAACTAAGAAATATATTTTCAGCAAGGCGCCATAGGAAAGGATATGCTTTTCTCATGGTCATGTGGTTGCAATAAATTTCTCTCTTATAGGTTTCAAGGTTTAAAATATGAATCATCTTGTTTTTTATTCTTTTTTGCCAAGATGGCTCAGCTTGTAGGCTTTTGCTTTTGTAAAAACTTCTAATCATCTATGATATTTACAATTTAGCAAAAA

Raphanus sativus (v1.0)

ID:

R1_LINE-L1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

623

Start:

2662148  

End:

2662770

Strand:

+

>R1_LINE-L1_20

GATCTAAACTTCAGAGGCACCACATACACATGGTGGAACAAGCAAAAAAGCTCTCCACTGGCCAAGAAGCTTGATAGATGTCTAGTCAATGACAACTGGTACAACGCGTTCCCGTCATCAGTAGCCTTTTTTGGAAGTCCGGACTTCTCTGATCACGCTGTCATAGCTATCACGTTAGAGCCGGACAGGATAAGAGCTAAGAAACCCTTTCGCTTCTATAACTTTATTCTTCAAAATCCAGATTTTATTGCAATTGTCTGTGCTGGCTGGTTTTCTCTCAATGTGACAGGTTCGGCCATGTACAGAGTTGCGGTTAAGCTCAAGTTGTTGAAGCAAACAATCAGGGAGTTCAGCAGACAAAACTACTCCGGGCTGGAAAAGAAAACTGCGCAAGCTCATGAGAAGCTGCTGCAAGCTCAGCAAGTGATGCTCTCCTCCCCGTCAGTCACAAATGCAGAAACAGAGATTACAGCTCTCCACGAATGGGAAGAATTGTCAGCAGCGGAGGCTGCTTTTTTCTATCAAAGGTCGCGTATAAATTGGTTGGCATTGGGTGATGGTAGCTCCTCGCTTTTCCACAGATATGCAGCATCCAGGCAGGCTTACAACCACATCCATTTCCT