ID Class Order Superfamily Length Start End Strand View
C4430494_LTR-Cassandra_1 RetrotransposonsLTRLTR-Cassandra109706814-
C4500270_LTR-Cassandra_2 RetrotransposonsLTRLTR-Cassandra274719992+
C4501466_LTR-Cassandra_3 RetrotransposonsLTRLTR-Cassandra255242496-
C4620600_LTR-Cassandra_4 RetrotransposonsLTRLTR-Cassandra203773975+
scaffold1_LTR-Cassandra_5 RetrotransposonsLTRLTR-Cassandra36712637131264079-
scaffold1_LTR-Cassandra_6 RetrotransposonsLTRLTR-Cassandra30012641911264490-
scaffold1_LTR-Cassandra_7 RetrotransposonsLTRLTR-Cassandra36318972381897600+
scaffold1_LTR-Cassandra_8 RetrotransposonsLTRLTR-Cassandra36518976791898043+
scaffold1_LTR-Cassandra_9 RetrotransposonsLTRLTR-Cassandra11019871111987220+
scaffold1_LTR-Cassandra_10 RetrotransposonsLTRLTR-Cassandra12919872211987349+
scaffold1_LTR-Cassandra_11 RetrotransposonsLTRLTR-Cassandra8719873531987439+
scaffold10_LTR-Cassandra_12 RetrotransposonsLTRLTR-Cassandra342232373232714-
scaffold10_LTR-Cassandra_13 RetrotransposonsLTRLTR-Cassandra329858933859261+
scaffold10_LTR-Cassandra_14 RetrotransposonsLTRLTR-Cassandra36521464142146778-
scaffold10_LTR-Cassandra_15 RetrotransposonsLTRLTR-Cassandra13923973692397507+
scaffold10_LTR-Cassandra_16 RetrotransposonsLTRLTR-Cassandra9429874872987580-
scaffold10_LTR-Cassandra_17 RetrotransposonsLTRLTR-Cassandra33132457513246081+
scaffold10_LTR-Cassandra_18 RetrotransposonsLTRLTR-Cassandra24143876044387844-
scaffold101_LTR-Cassandra_19 RetrotransposonsLTRLTR-Cassandra156257051257206+
scaffold101_LTR-Cassandra_20 RetrotransposonsLTRLTR-Cassandra19417846221784815+

< 1 2 3 4 5 > Total 33


Lepidium meyenii (v1.0)

ID:

C4430494_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

706  

End:

814

Strand:

-

>C4430494_LTR-Cassandra_1

ACATTTAACCGAAAGATAGATACAGTTTGGTGACATAGATAATCAAATCAATTATTTTAAATTCTCTTTAGGCACCACCATATTACCGTATCTTGAAACTGGTGTTATA

Lepidium meyenii (v1.0)

ID:

C4500270_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

274

Start:

719  

End:

992

Strand:

+

>C4500270_LTR-Cassandra_2

AGAGGTTTGAAAGAATTGATTTTGTTATATATGTCACTAAAATATACTTATTTTTTTGGTAATTTGTTCTGAGAAAATTTTAAGATAAGTTGAAGTAGTTAAAAGATAAATTATTTTCCAAAAAATGATTTTCAGAACCATATAAGTGAAAAAAATATTATATAATGATTTGTATGATTTTTAAGATTTTTCATACCGATCTTTAGATATAAAAATAGATCTACAAGCTGGGAGAAGACGTAGAACCACTAAAAATAGCGGTTGAAGTGTTACA

Lepidium meyenii (v1.0)

ID:

C4501466_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

255

Start:

242  

End:

496

Strand:

-

>C4501466_LTR-Cassandra_3

GAAATTTTACATATTTGTTTAGCAACACTAAAACTCATCACGCCATTTTTTCTTTATTTTTTCACTCACATGATACCAAGAATCACTTTCACTTATTCTAAATTTTTTTAGTTTAATAACATTTAACTATGAAATTCTTTCATAATATTTGACCAAAAATTAATCAAAAAGATAATTGCATTTTGGAGATATGTGGTCAAATCAATTATTTAAACTTTTTTCATGCAATACCATATTTTTTTAAATCGAGTTATT

Lepidium meyenii (v1.0)

ID:

C4620600_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

203

Start:

773  

End:

975

Strand:

+

>C4620600_LTR-Cassandra_4

TTAACTACCGAAGTTACCAAATGTACTTATTTGTTTGGTTAAACATCAAGAGAAAATTCCACAATAAATCGTGCAGTTCACGGGAACAATTTAGGGGTGAGTGACGATTGTCGGAACTATGTGAATAGGGACAAAACACAAAAAAAAATTATATATTGGTTTGAAAGGTTGAAATTTTTTTTAAAAAAATCTCCTAGACATAG

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

367

Start:

1263713  

End:

1264079

Strand:

-

>scaffold1_LTR-Cassandra_5

TGTAATGCTCCAACTACCATCTTAATGGTCCCCACGTCTTTTCTGTTACTGTGGAGCCCACTTTACTTGTCAAATAGTCGATACACTACATGAGGGAGATTTTAAAGACTTATTTACCAACCCTACAAATTACCACATGATATTTCTCTGTGTTTTGTCCTCACTCATATGGTTCCAAAAATCATTTCCCGCAAGATTACCCATCCTTGAACTATTCTAGCTCAAGTACGCTTAACCCTAGAGTTTTCTTTATACAAGTGACCAAAAAGATAAATGTAATTTGGTGACATAAGTGGCCAAATCAATTCTTTTAAACCTCTCCGTATGCACCAATATATACCATATATTCTAAAATCAGAGTGTTATA

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

1264191  

End:

1264490

Strand:

-

>scaffold1_LTR-Cassandra_6

TGTAACTCCCCGACTGCCACCTTAATGGGCCCTACATTTTCTCCGGGTCTGTAGGTCCACCTTACCAACCAAACTGTCGATATGCTACGTCCATGAGACTTTAAAAACTTGTTTACCGATCTTACAAATCATTACATGATCTTGTCCCGTGTTTTATCCTCATTCACACAGTTCCGAAAATCACTTCCCGGAAGATCACCTTCAACTACTCCATCTCAAGCACACTTAACTCTAGAGTTTTTTCTGGACAAGTGACCAAAAAGATAAGTACACTATAGTAATATATGTGCCCAAATTAAT

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

363

Start:

1897238  

End:

1897600

Strand:

+

>scaffold1_LTR-Cassandra_7

TGTAACATCCCGATTTCAGAAAATATGGTATATGGTGGTGCATGTAAAGAGGTTTAAAAGAATTGATTTGACTACCTATAACCAAATTGCATTTATCTTTTCTGTCACTTGTCCAGAGAAAACTTCAAGGTTAAGGGTGCTTGAGCTGAAATAATTGAAGGATAGGTGACCTTCCGGGTAGTGATTCTCATAACCATGTGAGTGAGGACAAAACACGGGAAAGATCATGAAATGATTTAAAGGATCGGTAAACAAGTATTTAAAGTCTCTCAAACATAGCGTACTTACCGTCAGACCGGTTAGGTGGGCCGATAAGCCGAGAGATGATATGGGACCCATTGATGTGTCGGTCGGGGCATTACA

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

1897679  

End:

1898043

Strand:

+

>scaffold1_LTR-Cassandra_8

TGTAATACTCCGGTTTAAGGAAATATGGTACATGATGGTGCATACGGAGAAGTTTAAAAGAATTGACTTGATCACTTATGTCACCAAAATGCGTTTATCTTTTTGGTCACTTGTCCAAAGAAAACTTCAGGGTTAAGCATGCTTGAGCTAGAGTAGTTGAAGGGTGGGTGAACTTACAGGAAGTGATTCACGGAACCATGTGAGTGAGGATAAATCACAGGAAAAGATCATGTGGTGATTTGTAGGGTCGGAAAACAAGTCTTTAAAGCCTCCCGGACGTAATGTACCGATTGTCGGACCGGTAAAGTGGACCCATAAGCCGAGAGAGGATGTGGTACCATTAAGGTAGCGGTCAGGGCATTACA

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

110

Start:

1987111  

End:

1987220

Strand:

+

>scaffold1_LTR-Cassandra_9

AGTGGTATCAGAGCTGAAAACATATGTGTGTAGACAAAAGGGCTCACACCATCAGGGGTAACGATCTTGGTGTGCAACATGGATGTTGTCGTTTGTTAGAGGGGTTGAAT

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

129

Start:

1987221  

End:

1987349

Strand:

+

>scaffold1_LTR-Cassandra_10

TGTAATACCTCTGTTTTAGAAAATATGGTATATGGTGGTGCATGTAGAGAGGTTTAAAGGAATTGATTTGGCCACCTATATTACCAAAGCGCACTTATCTTTTTGGTCATTTGTCAAGAAAAAACTCTA

Lepidium meyenii (v1.0)

ID:

scaffold1_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

87

Start:

1987353  

End:

1987439

Strand:

+

>scaffold1_LTR-Cassandra_11

TAGTGTATCAACCATCAGGCAAGAAAGGTGGGTCAGCAGGTCTGGGGAGGACGTGGGGCCCATTAAAGCGACGGTCATGACATTACA

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

342

Start:

232373  

End:

232714

Strand:

-

>scaffold10_LTR-Cassandra_12

TGTAACACCTCGACCGTCACCTTAATAGACCCCATGTCCTTTTCGGGCCCATGGGTCCACAATACCGGTCGAACAGTCGGTATACTATATCTGGAAAGCTTTAATAACTTATTTAACGATCTTACAAATCATCACATGATCTTTTCCCGTATCTTTTTTTCACTCACACGATCCACCCATCCTTCCACTACTTCAGCTCAAACACACTTAACCTTGGAGTTCTCTCTAGACAAATAACCGAAAAGATAAGTGCACTTTGATAACATAGTTGTCCAAATCAATTCTTTTAAACCTCTCTGCATACACTACTATATACCATATTTCCTAAAATTGGGTGTTATA

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

329

Start:

858933  

End:

859261

Strand:

+

>scaffold10_LTR-Cassandra_13

ATATGATGGTACATGCGGAGATATTTAAAATAATTGATTTGATCATCTATGTCACCAAAATACACTTATCTTTTCGGTCACTTGTCCAGAGAGAATTTCAGGGTTAAGCGTGCTTCAACTGGAGTAGTTGAAAGATGAATGACCTTCCAGGAAAGTGATTCTCGAAACCGTGTGAATGAGGACAAAACACGGGAAAAGATCATGTGGTGATTTGTAGGATCGGTAAATAAAGCCTTTCAGACGTAGTGTACCAATCGTTGGACCGGTAAGGTGAGTCCACATGCACAGAGAGGATGTGGGAACATTAAGATGACGATCAGGACGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

365

Start:

2146414  

End:

2146778

Strand:

-

>scaffold10_LTR-Cassandra_14

TGTAACGTTCCAATCGCCATCTTAATGGACTCAACATTGATTTCGGACCTGTGAGCCTATTTTACCGGTCTGATGGTCGGTACAATAAGTTCGAGAGACTTTAAATACTTGTTTACAGACCCTACAAATCACCACATGATCTTTCCATGTGTGTTGTCTTCACTCACATGGTTCTGAAAATCACATCTCAGAAAGTCACATATCCTTCAACTAATCCAGCTCAAGTATACTAATCTTGGAGTTTTCTTTAGACAAGTGACTGTTAACATAAGTGCATTTAGGTAACATAGGTAGTCAAATTAATTCTTTTAAACCTCTTTACTTGCACCACTATATATAATATTTCTTGAAATTGGGGTATTACA

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

139

Start:

2397369  

End:

2397507

Strand:

+

>scaffold10_LTR-Cassandra_15

AGATATTTAGAAGAATTGATATGACAACATAGTCACCAACTTACACTTATATTTTCGATCAAACATTTCCGAAAAACTACATAGTTAAGCGTGCATTTTGGTGGAGCAACTTCATGATGAGTAACCTTACAAGAAGTAA

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

94

Start:

2987487  

End:

2987580

Strand:

-

>scaffold10_LTR-Cassandra_16

TGACTAAAAAGATAAATGTATTTTAGTAATATAAATAGTTAAATTAATTATTTAAAACATTTTCATATGTACTACCATATTTTCTTAAAATTGG

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

3245751  

End:

3246081

Strand:

+

>scaffold10_LTR-Cassandra_17

TGTAACACATTTGAAGAAATATGGTGGTGTATGATGAGAGCTTAAGAAAGTTGATTTGATGAGCTATGTTTGCACTTATCTTTTCAGTCAAACATTTTGATACAACTCCACAGTTAAGCGTGTTTGATATGAAAAAATTTCAGAATATATGATTTATTGAAAAGTGATTCTTTGTGTAAGTGATGACAAAACATTGAAAAAATCATGTGCTAATTTGTAGGATTAGTAAATAAATCTTTAAAATCTCCGGAAATAGCATATCAGCTATTGAAAAATAATAGGCCCACGGGTTGAGAAGGGACGTGAGATCCACTAAGATTGACAGTCGGAG

Lepidium meyenii (v1.0)

ID:

scaffold10_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

241

Start:

4387604  

End:

4387844

Strand:

-

>scaffold10_LTR-Cassandra_18

TTATCAATTTTACAAATTACAATATAATTTTTTCCATGTTTTATCTTCACTTAAACGATGCCGTAAATCACTTTTGGTAGATCAACCATCCTAAAATTTTTCCAACTCAAACACATTTACGGAGTTCTCTCGCAATATTAACAATAGAATAATTAAGTGTGTTAGATAGATAGCTAAATCAATTATTTCTTTGTAATTCTTCTTATGCACCACTGTATATATTCCCTAAATGGGAGTTACA

Lepidium meyenii (v1.0)

ID:

scaffold101_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

156

Start:

257051  

End:

257206

Strand:

+

>scaffold101_LTR-Cassandra_19

TATAACTTCCCGAACTATAGAAATGTGGAGTTATATAAGTAATGTAAAAGAATTGATTTCACTATCTGTATGTCATCAAAATATAGTTTTCTTTAGCTTTACTCGTCCTGACAGAAGTCTAAAACTAATGGAATTTGACGTGGAGTTGTTGAAGGA

Lepidium meyenii (v1.0)

ID:

scaffold101_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

194

Start:

1784622  

End:

1784815

Strand:

+

>scaffold101_LTR-Cassandra_20

TGTAACACCTGATATCATGAAATATGGATAGGATATGCATAAATGTTTTAAAATAATTGATTTGATCATCTATATTATTAAAATGTATTTATTTTTTCGATCATTTGTCTAGAGAAAACTCTAAACTTAATCATGTTTGATTTGGAGTAGTTGATATATGGATTATCTTTTGGAAAGTGATTTTCGAAACCATG