ID Class Order Superfamily Length Start End Strand View
LA_C70999_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro2411020110441-
LA_C71_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro1312132+
LA_C7651_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro1504153-
LA_scaffold1004_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro3421353813879+
LA_scaffold107_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro126140878141003-
LA_scaffold107_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro93140997141089-
LA_scaffold1214_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro165185692185856-
LA_scaffold1335_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro184204330204513+
LA_scaffold1357_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro1114067940789-
LA_scaffold1430_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro1198848188599+
LA_scaffold1508_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro1004396544064-
LA_scaffold1533_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro179209700209878-
LA_scaffold1590_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro1576909069246+
LA_scaffold1708_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro1091193312041+
LA_scaffold1737_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro44939054353+
LA_scaffold1974_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro2391020110439-
LA_scaffold238_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro961715717252+
LA_scaffold3078_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro162136136136297-
LA_scaffold3185_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro2582855728814+
LA_scaffold3421_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro2322310723338+

< 1 2 > Total 2


Leavenworthia alabamica (v1.0)

ID:

LA_C70999_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

241

Start:

10201  

End:

10441

Strand:

-

>LA_C70999_LTR-Ngaro_1

TGTGGCTGCTGCTGTGATGTTGGCTGCTGTTGGTGTTGAGGCGCTGATTGCTGCTGCTGCTGTTGAGCAGGTGGTTGGTTCTGATGTTGTTGCTGCTGCTGTTGCTGATGATGATGTTGTTGTTGCTGCTGGTGCTGTTGCTGTGCACGTTGTAACAACAGTTGTTGCATTTGCATTTGCTGCTGCTGCTGCTGTTGTTGCTGTGAAACTTGTGGGTGTTGAGATTGCTGCAATTGCTGCT

Leavenworthia alabamica (v1.0)

ID:

LA_C71_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

131

Start:

2  

End:

132

Strand:

+

>LA_C71_LTR-Ngaro_2

GCTAGTACTGCTACGGCTGCTGCTGATACAATTGTTGCTGCTACTGCTACTGCTGCTGATACTCCTGCTATTGCTATTACTACTACTAGTGCTGCTGCTGCTACTACTACTGCTGCTGTTAGTACTGCTGC

Leavenworthia alabamica (v1.0)

ID:

LA_C7651_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

150

Start:

4  

End:

153

Strand:

-

>LA_C7651_LTR-Ngaro_3

GTAGTAGTAGCAGTAACAACAGCAGTATTAGTAATAGCAGTAGCAGTATCAACAACATCAATAGTAGCAAAAGCAGCAGCAGTAGTAGTAGTAGTAGCATCAGCAACAACATTAGTAGTAGCAGTAGTAGTAGCAGTAGAAATGGAGGCT

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1004_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

342

Start:

13538  

End:

13879

Strand:

+

>LA_scaffold1004_LTR-Ngaro_4

CAGTTGCCTCAGCCACCAACTACTTTGTCCCAACAACAGCAGCTGCAACAATTGTTGCACTCCTCTGTGAACCATCAGCAACAGCAATCACAGTCTCAACAACATCAGCAACAACAATTACTGCTGCAGCAGCAACAACAACAACAATTGCTGCCGCAACAACATCAACAACCGTTACAGCAACAGACTCAGCAGCTACAGCAGCAGCAGCAACAGCTAAGAATGCAGCCATCGCAATCTCACCCGCAGCCACAGCTACAGCAACAGCCACAGCCACAACAGTTGCAGCAAATTCAGCTTCCACAGAATCAGCTTTACAATGGTCAACAAGCAGCACAGCAG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold107_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

126

Start:

140878  

End:

141003

Strand:

-

>LA_scaffold107_LTR-Ngaro_5

TGTTGCTGTTGAAGCTGTTGCCTCATTTGTTGCTCTTGTTGTCTTGTTTCCATCTGTTGCTGCATCTGAATTATCTGCTGTTGTAGCTGTTGCTGCTGCATCTGACGATATTGAAATTGTTGTTTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold107_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

93

Start:

140997  

End:

141089

Strand:

-

>LA_scaffold107_LTR-Ngaro_6

TTGTTTGAGCTGCTCAGTCAATTGTTGAGGGAATTGTTGCTGATGTAGTACTTGCATTAGTTGTTGTTGCTGCATCTGACGATACTGAAATTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1214_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

165

Start:

185692  

End:

185856

Strand:

-

>LA_scaffold1214_LTR-Ngaro_7

TTGTTGCTGCATTTGTTGATGTGACATCTGTAGTTGTTGTTGTTGCTGTTGTTGTTGTTGCAACTGTTGTTGAGATTTCACCATGGCTGGTTGTGCTTGCATCTGTTGGCTGATATGGTTAATATTGTTCGGTTTGTTGAATTGGGAATTTGCAGGAGAGAGGTT

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1335_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

184

Start:

204330  

End:

204513

Strand:

+

>LA_scaffold1335_LTR-Ngaro_8

AACAAGAGGAACAACAACAACAACAACAGATGCTACATCAGAATCAGCTTCATCAACAACAAGAGGCTATACATCAGAACCAGCTTCATCAACAACAAGAAGCTATACATCAGAATCAGCTTCATCAACAACAAGAAGCTATACATCAGAATCAGCTTCATCATCAACAACAACAACAACAACA

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1357_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

40679  

End:

40789

Strand:

-

>LA_scaffold1357_LTR-Ngaro_9

TGGCTGTTGTTGATTAATCTGCATCTGCATCTGCATCTGCTGTTGTTGCTGCTGCTGCATCTGTTGTTGTGGTTGCTGATGCTGTAGTTGTTGCATCTGTTGTATTTGCTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1430_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

119

Start:

88481  

End:

88599

Strand:

+

>LA_scaffold1430_LTR-Ngaro_10

CAAGAACCACAAAGTCAGCAGCAAATACAGTTCCATCAACAACAACAACAAGAGTGGTTCCAACAGCAACAACAATGGCAACAACAACAGTATCTTCTCTATCATCAGCAACAACAGTT

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1508_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

100

Start:

43965  

End:

44064

Strand:

-

>LA_scaffold1508_LTR-Ngaro_11

AGCAGTAGTAGTGGAAGCAGTAGCGGAAGTGATAGTGATGGTCGTAGCAAAAGCGTAAGTAGCAGTGGTGGTCAAAGTAGCAGCGGAAGCAGTAGCCGTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1533_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

179

Start:

209700  

End:

209878

Strand:

-

>LA_scaffold1533_LTR-Ngaro_12

GTTGCCTGCTGCTGCTGTTGCTGTGCTTGTTGAGGAAGATCATGTTGTTGTAGCTGCTGCTGCTGTTGCTGCTGCTCCTGAGACTGAGCTAGCTGCTGAGGTGGCTGAGACAAAGGCTGCTGTAACTGTTGTTGATGCTGCAACTGCTGTTGTTGTGGCTGCTGCTGGAGTGGCTGTTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1590_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

157

Start:

69090  

End:

69246

Strand:

+

>LA_scaffold1590_LTR-Ngaro_13

CAACAAGACAACAACAACAATAACAACAATGGTAATAACAACAATGGGAGTAACAATGACAACAACAACAATGGTGGAAACAATAGTGATAACAACAACAATGGTAATAACAACAAAAGCAATGGCGGCGGAGGCAACAATCCGCCTCCTTCAAAAA

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1708_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

11933  

End:

12041

Strand:

+

>LA_scaffold1708_LTR-Ngaro_14

GCTTCTGCTATTGCTGCTACTTCTACTACTGTTGTTATTGTTGCTACTGCTACTGCTACTACTGCTACTGCTACTACTACTACTGCTGCTACTACTGAAACACTCCAAC

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1737_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

449

Start:

3905  

End:

4353

Strand:

+

>LA_scaffold1737_LTR-Ngaro_15

CTTCCTCACCTCCATCACCACAAGGAAATAATAACAATGACGGCAACAAAAATGGTAATAACAACAATGACAACAACAACAATGGTGAAAACAATGACAACAACAACAACAATGGTGGAAACAATAACAATGGTAATAACAACAACAATGGTGGAAACAATAATAATGGTAATAACAACAACAATGACAACAACAATGGTGGAAACAACAACAATGACAACAACAACAACAACAATGGTGGAAACAATAACAATGGTGGCAACAACAATGGTAACAACAACAACAATGGTGGAAGCAATAACAGTGACGGTAACAACAATGGTAATAACAACAACAAAAATGATGGAAACAATAACAATGATAGCAACAAAAGTGGTAATAACAACAATGGAAATAATAATGACAAAAACAACAAAAATGGTGGAAACAATGAGAATAATAATGACAAC

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold1974_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

239

Start:

10201  

End:

10439

Strand:

-

>LA_scaffold1974_LTR-Ngaro_16

TGTGGCTGCTGCTGTGATGTTGGCTGCTGTTGGTGTTGAGGCGCTGATTGCTGCTGCTGCTGTTGAGCAGGTGGTTGGTTCTGATGTTGTTGCTGCTGCTGTTGCTGATGATGATGTTGTTGTTGCTGCTGGTGCTGTTGCTGTGCACGTTGTAACAACAGTTGTTGCATTTGCATTTGCTGCTGCTGCTGCTGTTGTTGCTGTGAAACTTGTGGGTGTTGAGATTGCTGCAATTGCTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold238_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

96

Start:

17157  

End:

17252

Strand:

+

>LA_scaffold238_LTR-Ngaro_17

ACATGTATATATATATATGTATATACTCTTTCATATGTGTATATGTTTATCTCTGATCTCGCTGCGTTTCATCTCTATCGGGGTTTGAGATTCCTC

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold3078_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

162

Start:

136136  

End:

136297

Strand:

-

>LA_scaffold3078_LTR-Ngaro_18

TTGTTGTTCTTGCTGTTGAATCCGCTGCTGCTGCTGAAGCTGATACAGTTGCTGCTGAAACTGAAATTGCTGTTGTTGTTGCTGCTGCTGATGTTGTTGCTGCTGCTGATGTTGTTGTTGTTGTTGTTTCTGTGACTGGATCTGGAGCTGCTGGAACTGTTG

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold3185_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

258

Start:

28557  

End:

28814

Strand:

+

>LA_scaffold3185_LTR-Ngaro_19

AACAGCAATTGCAGCAATCTCAACACCCACAAGTTTCACAGCAGCAGCAACAACAACAGCAGCAGCAAATACAAATGCAACAACTCATGATGCAACGTGCACAGCAACAGCAACAGCAACAACAACAACAACAGCATCAACAGCAACAACAACATCACCAACAGCAGCAGCAGCAGCATCAGAACCAACCACCTTCTCAACAGCAGCAGCAGCAACCAACGCCACAACACCAACAGCAGCCAACACCGCAGCAGCCAC

Leavenworthia alabamica (v1.0)

ID:

LA_scaffold3421_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

232

Start:

23107  

End:

23338

Strand:

+

>LA_scaffold3421_LTR-Ngaro_20

AACAATGCAGCAGCAACAACAACAGCAGTTGATGCAGCAGCAGCAACAACAGCAGTTGCACCAGCTGAATCAGCCACAGCAGAAGCAGCAGCAGCAACAACAGCAGCTTCAACAGCTGAATCAGCCACAACAGCAGCAGCAGCAGCAATTGCACCAGCTGAATCAGCCACAGCAGCAGTTGCACCAGCTGAATCAGCTACTTCAACAGCATCCACAGCAGCGGCTGCCTCAA