ID Class Order Superfamily Length Start End Strand View
LA_C10031_LTR-Gypsy_1 RetrotransposonsLTRLTR-Gypsy103311413+
LA_C10055_LTR-Gypsy_2 RetrotransposonsLTRLTR-Gypsy5931593+
LA_C10085_LTR-Gypsy_3 RetrotransposonsLTRLTR-Gypsy242105346+
LA_C10119_LTR-Gypsy_4 RetrotransposonsLTRLTR-Gypsy27018287+
LA_C10129_LTR-Gypsy_5 RetrotransposonsLTRLTR-Gypsy57123593+
LA_C10133_LTR-Gypsy_6 RetrotransposonsLTRLTR-Gypsy13344176+
LA_C10183_LTR-Gypsy_7 RetrotransposonsLTRLTR-Gypsy6011601-
LA_C10297_LTR-Gypsy_8 RetrotransposonsLTRLTR-Gypsy466143608-
LA_C10309_LTR-Gypsy_9 RetrotransposonsLTRLTR-Gypsy12564188+
LA_C10313_LTR-Gypsy_10 RetrotransposonsLTRLTR-Gypsy87481567-
LA_C10323_LTR-Gypsy_11 RetrotransposonsLTRLTR-Gypsy22524248-
LA_C10391_LTR-Gypsy_12 RetrotransposonsLTRLTR-Gypsy29371363+
LA_C10399_LTR-Gypsy_13 RetrotransposonsLTRLTR-Gypsy5984601+
LA_C10413_LTR-Gypsy_14 RetrotransposonsLTRLTR-Gypsy51897614-
LA_C10433_LTR-Gypsy_15 RetrotransposonsLTRLTR-Gypsy6115615-
LA_C10453_LTR-Gypsy_16 RetrotransposonsLTRLTR-Gypsy504110613-
LA_C10567_LTR-Gypsy_17 RetrotransposonsLTRLTR-Gypsy211371581+
LA_C10581_LTR-Gypsy_18 RetrotransposonsLTRLTR-Gypsy6201620-
LA_C10583_LTR-Gypsy_19 RetrotransposonsLTRLTR-Gypsy6051605-
LA_C10589_LTR-Gypsy_20 RetrotransposonsLTRLTR-Gypsy15546200+

< 1 2 3 4 5 > Total 515


Leavenworthia alabamica (v1.0)

ID:

LA_C10031_LTR-Gypsy_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

103

Start:

311  

End:

413

Strand:

+

>LA_C10031_LTR-Gypsy_1

TCTGGTATCAGAGCTTAAAGCTCCTAAACCGATTGTTTCTACACCCTTTTGCTTCATTACTTGTTTGCTTTGTTTTGTTTCATTTAAATCTACAAAAAAAAAA

Leavenworthia alabamica (v1.0)

ID:

LA_C10055_LTR-Gypsy_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

593

Start:

1  

End:

593

Strand:

+

>LA_C10055_LTR-Gypsy_2

GGAGTGTCGGTGGATCCTGAGAATATCTGAGCCATTAGTGATTGGCCTAGACCGAAGAGTGCTACTGAGATCCGCAGTTTTCTGGTATTAGCTGGTTACTATCGGAGGTTTGTTAAGGGCTTCGCTAGCATGGCGTAAGCAATGACTAAGTTGACTGGTAAGGATGTGCCGTTTGTGTGGTCAGAAAAGTGCGAGGAGAGCTTCACTAAGCTCAAAGAGATGTTGACCAGCACTCCGGTTCTAGCTTTACCAGAGGCAAACCAACCTTATGTTGTGTACACCGATGCATCCAAGATGGGGCTCGGTTGTGTACTGATGCAGCATGGTAAGGTGATTGCTTATGCATCACGGCAGTTGAGGAAGCATGAGTGCAACTACCCTACGCATGTATTAGAGATGGAAGTGGTAGTGTTTGCACTTAAGATTTGTAGATCTTATTTATATGGCGGAAAGGTGCAGCTGTTCACTGATCACAAGAGTTTGAATTACATCTTCACTCAACCTGAGTTGAACCTGAGACAACGTCGTTGGATGGAGTTAGTGGCCGATTATGATCTTGAGATCGCTTATCACCCGGGTAAGGCCAATGTAGT

Leavenworthia alabamica (v1.0)

ID:

LA_C10085_LTR-Gypsy_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

242

Start:

105  

End:

346

Strand:

+

>LA_C10085_LTR-Gypsy_3

TGGTTACATTTAAGACCTGAAAGATTTCCCGGGAAGAGGAAAGGCAAGCTCTCACCAAGGGGAGATGGGCCATTCAAGATCATGGAGAAAATCAATGACAATGCATACCGCATTGATCTACCAGGTGAGTTTAATGTTTCAACTTCTTTCAATATTGCTGATTTGTCTCCATTTGATGTAGGTGATGATGAACCTGTTTTGGGGTCAAAACCTTTTCAAGAGAGAAGGAATTATGAGGACAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10119_LTR-Gypsy_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

270

Start:

18  

End:

287

Strand:

+

>LA_C10119_LTR-Gypsy_4

GTCAGACCATATGGAGCGGTAGTTCTTCTTAATTCGACTGGTGGCGAGTTTACTGTAAATGGGCAAAGATTGAAGCCCTATTTGGCTACTACTGAGCATCAAGCAAGGACTGAGGCACAGGTTGATGATGCACTAATTGCCTAGACGGTAAATCAGTCGAGCTAAGCGACGTTAAACAAGCGCTTGGTGGGAGGCAACCCATCGGAAGACTTACTAACATTTTTTTTTAGTTTTTGATTTTAGTTTCTTTCTTTTTGACCATTTGTGTAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10129_LTR-Gypsy_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

571

Start:

23  

End:

593

Strand:

+

>LA_C10129_LTR-Gypsy_5

ACTACCAAGCATCCGCGGCCCTACCGCCTAAGATGGTTGAACGACCAAGCTGAGCTCAAGATTGCCGAGCAAGTCACAATCTCATTCCACATCGGCAAGTATCAGGATCAAGTTGTATGTGACGTGGTCCCTATGCAAGCGGGTCACCTACTGCTCGGGAGACCTTGGCAATTTGACTGAGAGGTTACCCATGACGGCCGGACCAACTATTACTCCTTCACATAAAACAAGCACAAGTACAACCTTGCGCCTCTTAGCCCATCTCAAGTATACGAGATACAGACCAAGATGGACAAAGAGGACCAGGTAAGTAAAGCTAACCTTTTCATTTTCAATAAGGTTTGCAAAACTTTTGTTGCCTCTTCCCTCACCGTGCTACTAATGATCTTCAGGCTCTGAATTTTCAGGTGAGGATCTACCACTAGAGGTAACCTCAGTTCTAGACAGGTTTAGAGACGTCTTCCCTGAAGATGTCCCAGCCGGCTTGCCACCCATCCGGGGAATCGAGCACCAGATTGACCTGGTCCCCGGGGCGGCTCTACCAAACCGGCCTGCCTATCGCATGAACCCG

Leavenworthia alabamica (v1.0)

ID:

LA_C10133_LTR-Gypsy_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

133

Start:

44  

End:

176

Strand:

+

>LA_C10133_LTR-Gypsy_6

GAAAAAAAGACGAAATCGGAGAAAAGACTTAAGGACCAGAAAAACATATGTGGATGAACTATACTGAATTTTTGTTTAGGACATGAGCAATGGTTCGAATTCGGGGACGAATTCTTTTGTAGTAGGGGAGAAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10183_LTR-Gypsy_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

601

Start:

1  

End:

601

Strand:

-

>LA_C10183_LTR-Gypsy_7

GTGCTGAAGTCTTTAACGAACCGCCGGTAGAAGCTGGCCAGGCCGTGAAAGCTTCGGACATGGCCTATGCTGGTAGGCGTGGGCCATTCCTGAATGGCTTTGATATTCTCGTCATCTACCTGCAAGCCATCAGACCTAACAACAAAACCTAGGAAAACTAGGCTGTTAGCACAAAAGGTGCACTTCTTAAGGTTGGCATAGAGCTTTTCCTTTCGGAGAGTCTCTAAAACCAACTCAAGATGGGTTAGATGCTCAGCATAAGTTCGGCTATAAACAAGAATGTCTTCAAAGTATACAACAACAAACTTATTCATGTACTCCCTTAGAACCTTGTTCATTAGCCGCATGAAAGTACTTGGGGCGTTGGTAAGGCCGAAGGGCATCACCAACCATTCGTACAGCCCTTGCTTGGTTTTGAAGGCTGTTTTCCACTCGGCCCCTTCCTTCATTCTTACCTGGTGATAACCACTTTTAAGGTCTATCTTGGAGAAGATGGACGACCCACTAAGCTCATCAAGCATGTCATCCAACCGTGGGATCGGATGTCGATACTTGATGGTGATGTTGTTGATGGCTCGGCAATCAACACACATCCGCCATG

Leavenworthia alabamica (v1.0)

ID:

LA_C10297_LTR-Gypsy_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

466

Start:

143  

End:

608

Strand:

-

>LA_C10297_LTR-Gypsy_8

TCCACTAACTTGGACACCGATGAATACTCCCGTATGGTACAATGGTTCTTGATTTCTGGCCGCATCCCCTTCAAGAACCGTCGTATCTGTGCCTGCTCGTAATCAAAACCATGTCCAACAAACCAGTTCAGTCTGCTGAACTCTGCCTCGTACTCCCAAACCGATCGACTCCCCTATGATAAATCTAGGAACTGGCTCTCCAGATGATCACGAGCCTTCTGGGGAAAGTACTTGGTATCGAATTCTCTCCGAAAATTGACCCCTCATACGATCAGCTTCACCCCATCTCGCACAGACCCTTAACAACAAAGAATGTGGCTCCCTTTAGGTAGTGCACAGAAAGGTCCACCTGGAACTCCTCCGAACATCGTATCGAGTGAAATTTCCATACTAAGCAGGACCTCCACTCATCAGCCTCGATTGGCTTGGCACCCCCATGAAAGAACTAGGTACCCAACCGCTGCAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10309_LTR-Gypsy_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

125

Start:

64  

End:

188

Strand:

+

>LA_C10309_LTR-Gypsy_9

TGAATTCCCGGTATTTCAAACCTCTTCTCATCTACTTGTTTTCTTTTGTAAGTTCTTACTTGAGGACAAGCAAAGATTCAAGTCTGGGGGAGTTGATATATCTCATATTTGACCCATTTTAGGAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10313_LTR-Gypsy_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

87

Start:

481  

End:

567

Strand:

-

>LA_C10313_LTR-Gypsy_10

TTGTAGGACTTAGGGATCGAATCCACGAAGATCAAAGGTTACACCACAGATTACAGAAATTTTAATCAAGCTAAGACAATAAAAAAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10323_LTR-Gypsy_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

225

Start:

24  

End:

248

Strand:

-

>LA_C10323_LTR-Gypsy_11

CATGCCTTCCCAAGTTCTGATATGCCCATATCTTAGGCGTCTTCTCTCGGTAAGCTCCCTGTCCCACCATGTGAGTGCATGGTCGGTCAGTTGGGCTGAAGCAACAGCTACCTTCTTCTGCTCCGAGTAGTTATAACACTCGAAGATGTATTCCATGCGCTTCTCCCAATTTAGGTAAGCTTCTGGGTCCACCTTTCCAGCAGAGGTAGGCGGGATAAGTTTGAC

Leavenworthia alabamica (v1.0)

ID:

LA_C10391_LTR-Gypsy_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

293

Start:

71  

End:

363

Strand:

+

>LA_C10391_LTR-Gypsy_12

GAGCCGCTTGGGTTAGAGACAGTGAATTAGGCAGACATTCTGAGTAGAGTGCGATAGGCACAACAGTTGGATGAGGAGTTGATCTGGGCTTATAGGTCCGAGAAGTCTGAGTATGTTGTAGCCACTAACGAAACCATTATGCTTAACGGCCGGGTGTGTGTAGCAAACGATGAAGTGCTAAGGTAGAACATTCTGGGGGAAGCACACTAGAGTCTGTTTTCGATTCGTCCGGGAGCTACCAAGATGTACCATGACCTCAAAACGGTATTATAAGTGGGTATGGATGAAGAAGG

Leavenworthia alabamica (v1.0)

ID:

LA_C10399_LTR-Gypsy_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

598

Start:

4  

End:

601

Strand:

+

>LA_C10399_LTR-Gypsy_13

ACCAGAAGTGCCACCGGTTGCAGTACCTATTGAGCCGCCCGTTTAAGAGGTTCCACCTAGAGCAGTTGTTGCTGAGAGAGTTCCTTCTTATTTGGAGATGATGGGACAGATGCAGAAGATGAGTACATCATTTTTCAAAGGTGGTGCTAGACCTGAAGAAGCATATGAGTGGAGAAGATGCATGGAGCGTAATTTTGAGTTTAGTAGATGTCCAGAGGGATACAAGGTAGACTTAGCGGTTCATTATCTAAAGGTCGACGCTCATCTTTGGTGGAGGAGTGTTAACACTAGGAGAGTTACTGCGGTTATGACTTGGGATGACTTCGTAGAGGAGTTTGATGCCAAGTATTTTCCTCAGGAAGTACGAGACTGAATGCATGTTTTTGGAATTGGTACAGGGTGAGAAGTCGGTTAGAGTTTATGAGGAGGAATTCAATCGATTTCGGGTGTACGCTGGCCGTCTGGTTGATGATTAGCGGGTTCTTGTGCGCCGGTTTTTGAAAGGACTCAGACCAGATCTGAAGAACAGATGCATGGTGCGGGCTTCTGCCTCTATGGTGGAGTTGGTAGAGACCGCATCACAGATTGAGGAGGGTCT

Leavenworthia alabamica (v1.0)

ID:

LA_C10413_LTR-Gypsy_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

518

Start:

97  

End:

614

Strand:

-

>LA_C10413_LTR-Gypsy_14

CTACCTCAAGGCATCCTCCAATTAGGCTGCCCTCTCGACCAACTCAGCTACCATCGCATACTTTCGGATAATACAGTGGTTCCAAAGTTCTGATCGCAGCCCCTTCAGGAACCATCGTACCTGAGACTGCTCATCATCGAACCCGTGTCCAACAAACCGCTTCAGTCTGTTGAACTCCGCCTCGTACTAACGAACAGAGCGGCTCCCCTGTGTCAGCTCCAGGAACTGGTTCTCCAACCGGTCACGAGCCTCCTGGGGAAAATACTTGGCATCGAATTCCCACCGGAAATCAACCCAAGACATGCAATCCGCATCACCGCATCTCGCCACAACACCTACCCACCAAGAATGTGCATCCCCCTCACGGTTATGCACCGCCAAGTCTACCCGGAACTCTTCCGGACAACGAATAGAATGGAAGTTCCTCTCCAACCAGGACCTCCATTCATCTGCCTCTATCAGGTTGGCACCCCCATGAAAGAACTGGGTACCCAACCGCTGCATATGCTCCATCATCC

Leavenworthia alabamica (v1.0)

ID:

LA_C10433_LTR-Gypsy_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

611

Start:

5  

End:

615

Strand:

-

>LA_C10433_LTR-Gypsy_15

ACCCGCTTCCTGCTCAAAGCATCGGCCACTACATTGGCTTTACCCGGGTGATAAGCGATCTCAAGATCGTAATCTGCCACTAACTCCATCCAACGATGTTGTCTCAAGTTCAACTCAGGTTGAGTGAAGATATACTTCAAACTCTTTGTGATCAGTGAACACCTGGACCTTTCCGCCGTATAAATAAGATCTCCAGATCTTAAGTGCAAACACTACCGCTGCCATCTCTAAGTTATGCGTAGGGTAGTTGCACTCATACTTCCTCAACTGCCGTGATGCATAAGCAATCACCTTACCATGCTGCATCAGTACACAACCGAGCCCCATCTTGGATGCATCGGTGTACACATCATAAGGCTGGTCTTCCTCTGGTAAAGCTAGAACCGGAGTGCTGGTAAACATCTCTTTGAGTTTAGTGAAGCTCTCCTCGCACTTCTCTGACCACACAAACGGCACATCCTTACAAGTCGGCTTAGTCATTGCTTGCGCCAAGCTAGCGAAGCCCTTAACAAACCATCGATAGTAACCAGCTAATCCCAGAAAACTATGGATCCCAGTGGCACTCTTCGGTCTAGGCCAATCACTAATGGCTCGGATCTTCTCAGGATCCA

Leavenworthia alabamica (v1.0)

ID:

LA_C10453_LTR-Gypsy_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

504

Start:

110  

End:

613

Strand:

-

>LA_C10453_LTR-Gypsy_16

CTTGACATGTCCTTCAGCTTGTATAGCCAGATGAAGGACTTCATGCATGTCATGGTAGGGTTGCATTTCGACCTTCATGGCTATACGGCCTTGTCGTCCATCAACGAACTGGGCCATGATGGATTAATCCGAGTCATTGATACCAAGTCTCCCTCGTAACGTATCAAACTCATCAAAATACTCTTCCACCGTCTTTGTACCTTGGATGAGTTTCCTGAATTTCTTCTGGATGTACCGGTGGTAGTGAGGTGGAACATATCTTCTGCTCAGGACTTCTTTCATGTCTTCCCATGTCCTGATGTGCCCATATCTTAGGCGTCTTCTCTCGGTAAGCTCCCTGTCCCACGATGTAAGCGCATGGTCGGTCAATTGGGCTGAAGCTACAGCAACCTTCTTTTGCTCGGAGTAGTTATAGCACTCGAAGATATACTCCATTCACTTCTCCCAATCAAGGTAAGCTTCCGGGTCTACCTTTCCAGCAAAGGTAGGTGGGATGAGCTTGAC

Leavenworthia alabamica (v1.0)

ID:

LA_C10567_LTR-Gypsy_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

211

Start:

371  

End:

581

Strand:

+

>LA_C10567_LTR-Gypsy_17

CAGAACCGATATGTCATGGCATAAAATACGTTTGACATAGCAAATCGATTGCAAAAGTCGTGAAATATTTTGGAGTTATAGGTAATCCTTATATCTCGATTTACCAATTGACGGATTTGAATTTTTGTTCATATTCTAAGATATATTCACGTTTTGGTGAGATTATATATTGCAGACGCGATTTAGACCAACGTGTATTCAAAGTTAGATC

Leavenworthia alabamica (v1.0)

ID:

LA_C10581_LTR-Gypsy_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

620

Start:

1  

End:

620

Strand:

-

>LA_C10581_LTR-Gypsy_18

GGAATGCATTCGACCCAGTTGGTCACATTCTTTCCGATGGATTCTCTAAGGAGGGTGGAAAAGGTCCGGTTAACCACCTCAGTTTGTCCATCCGTTTGTGGATAACAAGTAGTGGAGAATAAAAACTTGGTGCCTAGCTTTCTCCACACAGTTCTTCAGAAGTGACTCAAAAAGTTTGTGTCACGGTCGGAAACAATGGTCTGGGGCAGCCCATGTAGCCGTACAACTTCCCGAAAGAATAGGTTGGCTATGTGAATTGCATCGTTGGCCTTGGAGCATGGGATGAAGTGAGTCATTTTGGAGAAACGGTCCACGACAACAAAGATGGAGTCTTTGTGTTGGATCTGGGGTAGTCCAAGCACAAAATCCATAGAGATGTCTTCCCACGGCGCATTAGGAATCGGCAAGGGCATGTATAGCACGTGGGGGTAAATCCGTGACTTGGCTTTGGGGCATGTTATGCAGCTGCTGCAATGCCTCTCAACGTCCTTCTTGAGTCGGATCCAGTAGAAATGCTCTTTGACCACAGCCAAAGTCTTGTCTCGTCCAAAGTGTCCCATTAGGCCTCCTCCATGTGCTTCCCGGATCAGCAAACTCCTCATGGAGCCAACCGGAATGCA

Leavenworthia alabamica (v1.0)

ID:

LA_C10583_LTR-Gypsy_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

605

Start:

1  

End:

605

Strand:

-

>LA_C10583_LTR-Gypsy_19

AACTTAGTGTCCCTATCCGAAACTATGGTTCTAGGAATTCCATGCAAACGGACCACGTCCTTGAAGAACAAGTCAGCTATCTGTGTGGCATCATTGGTCTTGTTGCAAGGAATGAAATGCGCCATTTTAGAGAACCTGTCAACAACTACAAAGATAGAATCCTTGTGGTTCATCACTGGCAGTCCTAGGACAAAATCCATTGATATATCCTCCCAAGGTCTGTTAGGTATAGGCAAAGGAATATATAAACCATGTGGGTGTAACCTGTATTTGGCTTGGAGACAAGTGGTGCAAGTAGCACAATGTTTGTCAACATCCCTCCTTTGGTGAGGCCAATAGAAATGCTCGGTAGGCACAGCTATGGTTTTGTACCTACCAAAGTGTCCCATAAGCCCTCCTCCGTGTGCCTCACGGATCAATAGATCTCTCATGGATCCTTGTGGAATACACAACCTCTTGTCTTTTAACAGGTATCCTCCCTGCTGGTAGTAACTTCCAACAGCAGCCTTGTGTGTATCCTTGAATGCTTCCTGAAAATCCGGATCATCTGAATACAATTCTTTAATATGCTCAAATCCCATTACCTTGGCATCCATGATGGTGAT

Leavenworthia alabamica (v1.0)

ID:

LA_C10589_LTR-Gypsy_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

155

Start:

46  

End:

200

Strand:

+

>LA_C10589_LTR-Gypsy_20

GAGAGTATGAGACTGAGTTCAACCGACTTAAGCGGTTTGGTGGCAGAGATTTAGAGGATGAGGATGTTCAGATTCGACGTTTCTGAGGGGAATGCGCCTTGAGATCAGGAACCATTTAATCTGCAGACATGTGCCATCTTAGCTGAGTTGGTTGA