ID Class Order Superfamily Length Start End Strand View
Contig00001_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA1624082540986+
Contig00008_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA1372738427520+
Contig00021_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA1673910039266-
Contig00022_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA1371709517231-
Contig00030_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA15857125869-
Contig00044_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA1472428624432-
Contig00064_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA14678748019-
Contig00092_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA2812540225682+
Contig00092_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA1383262932766+
Contig00147_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA1621231112472-
Contig00176_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA1461428214427+
Contig00182_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA13969267064-
Contig00409_ERROPOS100000_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA1622506825229+
Contig00409_ERROPOS2300000_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA1399860398741+
Contig00507_ERROPOS184643_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA161117056117216+
Contig00507_ERROPOS285268+_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA913180431894-
Contig00507_ERROPOS285268+_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA1255524355367+
Contig00507_ERROPOS285268+_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA161101992102152+
Contig00516_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA1509950799656+
Contig00526_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA1476517265318+

< 1 2 3 4 5 > Total 25


Isatis indigotica (v1.0)

ID:

Contig00001_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

40825  

End:

40986

Strand:

+

>Contig00001_SINE-tRNA_1

GTGGAAGTCCCCTTAGTCCAGTGGTTGATTAAGGGTTCATTAATGCTTCTACACCAAGAGGTCTTGGGTACAAATCTCCGAGGAGACAATTTCTGCAGATTAATGGAGGCAAGCTTATAAGGAAATTTTCAGCGTGGTGCAAGCGGAGCCGTTCATCGTGAT

Isatis indigotica (v1.0)

ID:

Contig00008_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

137

Start:

27384  

End:

27520

Strand:

+

>Contig00008_SINE-tRNA_2

AAAGATTTTTAGGCAAATGTTTAGAAGTCGTTGGTTCGAGTGACATTTGGAACATAACTAATTTAACATGTTGTTGTTCCGGATTTGGAGGGATTATGAGCTTCGGGTCACATATCTTTTTAGTAATTCAAAAGAAA

Isatis indigotica (v1.0)

ID:

Contig00021_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

39100  

End:

39266

Strand:

-

>Contig00021_SINE-tRNA_3

TTTTTTTCATTTTCTCTTAATTACCAAGAGGTTATGGGTCTAAGCCGTACATCTCCTCAGGCCCGAGACCAGAGCGTGTTATATGGTCCCGTCCCCAAAAGCCATTCAAACCGACAACCTCTAAACTTTGTCTAAGATCTTTACCAGTTGAGCTATTGGCTGTTGGT

Isatis indigotica (v1.0)

ID:

Contig00022_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

137

Start:

17095  

End:

17231

Strand:

-

>Contig00022_SINE-tRNA_4

TTTCTTTTGAATTACTAAAAAGATATGTGACCCGAAGCTCATAATCCCTCCAAATCCGGAACAACAACATGTTAAATTAGTTATGTTCCAAATGTCACTCGAACCAACGACTTCTAAACATTTGCCTAAAAATCTTT

Isatis indigotica (v1.0)

ID:

Contig00030_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

5712  

End:

5869

Strand:

-

>Contig00030_SINE-tRNA_5

AACGGATATTTCTGCACCACACTGAAGATCTCCTGCAATCTTGCCTCCTTTTTTAATCTGCATAAACCATGCATTTTCTGGGAATCGAAACCCAGACCTCCTGGTGTAGAAGTATTAATGAACATTTAGTCAAACCAGTGGACCAAATGAGTTTCCAC

Isatis indigotica (v1.0)

ID:

Contig00044_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

147

Start:

24286  

End:

24432

Strand:

-

>Contig00044_SINE-tRNA_6

TTGCACCACGCTGAAGATCTCCTGCAATCTTGTCTCTTTTTTTAATCTGCATAAATCCTGCATTCTCAGGGAATCGAAACCCAGACCTCCTAGTGTAGAAGCATTAATGAACCTTTAGTCAAACCACTGGACCAAAAGGGCTTCCAC

Isatis indigotica (v1.0)

ID:

Contig00064_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

146

Start:

7874  

End:

8019

Strand:

-

>Contig00064_SINE-tRNA_7

TTGCACCACGCTGAAGATCTCCTGCAATCTTGTCTCCTTTTTAATCTGCATAAATCCTGCATTTTCTGGGAATCGAAACCCAGATCTCCTGGTGTAGAAGCATTAGTGAACCTTTAGTCAAACCACTGGACCAAAGGGGCTTTCAC

Isatis indigotica (v1.0)

ID:

Contig00092_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

281

Start:

25402  

End:

25682

Strand:

+

>Contig00092_SINE-tRNA_8

GTGGAAGCCTCCTTTGGTCCAGTGGTTTGACTAAATGTTCATTAATGCTTCTACACCAGGAGGTCTGGGTTTCGATACCCAGAGAATGCATGATTTATGCAGATTAAAAAAGGAGACAAGATTGCAGGAGATCTTCAGCGTGGTGCAAGAAAATCTGTTCGGCATGTATCTTCATAAGGCAAGTTCAGGTGGAACCGGCAGGCGGAGATCTTCATATGACGGTAGAATTGTCAGTTGTAAGAGTCGTCGCTGTAATAGTTATCATAATTTGCAATATATAA

Isatis indigotica (v1.0)

ID:

Contig00092_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

138

Start:

32629  

End:

32766

Strand:

+

>Contig00092_SINE-tRNA_9

GGAAGCCCCCTTTGGTCCAGTGGTTTGACTAAAGGTTCATTAATGCTTCTACACCAGGAGGTCTGAGTTTCGATTCCCAGAGAATGCATGATTTATGCAGATTAAAAAAAGAGACAAGATTGCAGGAGATCTTCAGCG

Isatis indigotica (v1.0)

ID:

Contig00147_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

12311  

End:

12472

Strand:

-

>Contig00147_SINE-tRNA_10

ATCACGATGAACGGCTCCGCTTGCACCACGCTGAAAATTTCCTTATAAGCTTGCCTCCATTAATCTGCAGAAATTGTCTCCTCGGGGATTTGTACCCAAGACCTCTTGGTGTAGAAGCATTAATGAACCCTTAATCAACCACTGGACTAAGGGGGCTTCCAC

Isatis indigotica (v1.0)

ID:

Contig00176_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

146

Start:

14282  

End:

14427

Strand:

+

>Contig00176_SINE-tRNA_11

GTGAAAGCCCCTTTGGTCCAGTGGTTTGACTAAAGGTTCACTAATGCTTCTACACCAGGAGATCTGGGTTTCGATTCCCAGAAAATGCAGGATTTATGCAGATTAAAAAGGAGACAAGATTGCAGGAGATCTTCAGCGTGGTGCAA

Isatis indigotica (v1.0)

ID:

Contig00182_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

139

Start:

6926  

End:

7064

Strand:

-

>Contig00182_SINE-tRNA_12

CGCTGAAGATCTCCTGCAATCTTGTCTCTTTTTTTAATCTGCATAAACAATGCATTCTATGGGAATCAAAACTCAGACTTCCTGATGTATAAGTATTAATGAACATTTAGTCAAACCATTTGACCAAAGGGGCTTCCAC

Isatis indigotica (v1.0)

ID:

Contig00409_ERROPOS100000_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

25068  

End:

25229

Strand:

+

>Contig00409_ERROPOS100000_SINE-tRNA_13

GTGGAAGCCCCCTTAGTCCAGTGGTTGATTAAGAGTTCATTAATGCTTCTACACCAGGAGGTTGTGGGTTCAAATCCCCGAGGAGACAATTTCTGCAGATTAATGGAGGCAAGCTTATAAAAAAATTTTCAGCGTGGTGCAAGCAGAACCGTTCATCGTGAT

Isatis indigotica (v1.0)

ID:

Contig00409_ERROPOS2300000_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

139

Start:

98603  

End:

98741

Strand:

+

>Contig00409_ERROPOS2300000_SINE-tRNA_14

GTGGAAGCCCTTTTGGTCCAATGGTTTGACTAAATGTTCATTAATGTTTCTACACCAGGAGGTCTGGGTTTCGATTTTCAGAGAATGCATGATTTATGCAGATTAAAAAAGGAGACAAGATTGCAGGAGAACTTCAACG

Isatis indigotica (v1.0)

ID:

Contig00507_ERROPOS184643_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

117056  

End:

117216

Strand:

+

>Contig00507_ERROPOS184643_SINE-tRNA_15

GTGGAAGTCTCTTTAGTTTATTGGTTCAACTAAAGGTTCACTAATGATTCTACATCCAGAGGTCTGATTTTAAATTCCCAGAGAATGCATGATTTATGCAGATTAAAAGGAGATAAGCTTACAAGAGATCTTTAGCGTGGTGCAGAAACAACCGTTAGACA

Isatis indigotica (v1.0)

ID:

Contig00507_ERROPOS285268+_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

91

Start:

31804  

End:

31894

Strand:

-

>Contig00507_ERROPOS285268+_SINE-tRNA_16

AGTCCGCATGTGAATACCGCAGTGGCCGGGACTCGAACTCGTGATGGCGGGTACCTCAGCCGAGGGTCCTTTACCACCAGAGCTAGAGGCC

Isatis indigotica (v1.0)

ID:

Contig00507_ERROPOS285268+_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

125

Start:

55243  

End:

55367

Strand:

+

>Contig00507_ERROPOS285268+_SINE-tRNA_17

AACCAGGACATCGTGGTCTGGTGGTAAGGACTCACAGCTGTGAGTACCGCCACCTGGGTTCGATTCCTGGCTACATCTGATTTAACATGGCTTCCGTTTGGCTTCCAGGACCACACCAGATCCAG

Isatis indigotica (v1.0)

ID:

Contig00507_ERROPOS285268+_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

101992  

End:

102152

Strand:

+

>Contig00507_ERROPOS285268+_SINE-tRNA_18

GCCTTGGTCCAGTGGTAAAAGGGAGTTAGTAACTTTCCGCCACCTGGGTTCGAGTAGTATTGGCCACCGGGGTTCGAACAATTTAACATGGTTTCCCCGGACCCCATGATTAGTCTTTGTGCCTAGAAAGCCTTTAGGATCACCTAAGTTATAAAAAAAAA

Isatis indigotica (v1.0)

ID:

Contig00516_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

150

Start:

99507  

End:

99656

Strand:

+

>Contig00516_SINE-tRNA_19

GTGGGAGCCCCTTGATCTAGTGGTTTGATCAAGGGTTCATTAATGTTTCTACACCCGGAGGTTTTGGGTTCAAATCCTCGAGGAAGCAATTTCTACAGATTAATGAAGGCAAGTTTACAGAGATCTTCAGCGTGGTGCAACCGGAGCCGT

Isatis indigotica (v1.0)

ID:

Contig00526_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

147

Start:

65172  

End:

65318

Strand:

+

>Contig00526_SINE-tRNA_20

GTGGAAGCCCTTTTGGTCCAGTGGTTTGACTAAATGTTCATTAATGCTTCTACACCAGGAGGTCTGGGTTTCGATTCCCAGAGAATGCAGGATTTATGCAGATTAAAAAAGGAGACAAGATTGCAGGAGATCTTCAGCGTGGTGCAA