TBGR-Browse-Iin-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Contig00001_Retroposon-L1-dep_1	Other	Retroposon	Retroposon-L1-dep	318	35724	36041	-
Contig00026_Retroposon-L1-dep_2	Other	Retroposon	Retroposon-L1-dep	284	19912	20195	+
Contig00097_Retroposon-L1-dep_3	Other	Retroposon	Retroposon-L1-dep	186	872	1057	+
Contig00106_Retroposon-L1-dep_4	Other	Retroposon	Retroposon-L1-dep	215	23092	23306	+
Contig00147_Retroposon-L1-dep_5	Other	Retroposon	Retroposon-L1-dep	318	17256	17573	+
Contig00871_Retroposon-L1-dep_6	Other	Retroposon	Retroposon-L1-dep	233	60402	60634	+
Contig00930_Retroposon-L1-dep_7	Other	Retroposon	Retroposon-L1-dep	367	13657	14023	+
Lachesis_group0_Retroposon-L1-dep_8	Other	Retroposon	Retroposon-L1-dep	356	2026619	2026974	-
Lachesis_group0_Retroposon-L1-dep_9	Other	Retroposon	Retroposon-L1-dep	260	6777084	6777343	+
Lachesis_group0_Retroposon-L1-dep_10	Other	Retroposon	Retroposon-L1-dep	324	8427181	8427504	-
Lachesis_group0_Retroposon-L1-dep_11	Other	Retroposon	Retroposon-L1-dep	192	8675782	8675973	+
Lachesis_group0_Retroposon-L1-dep_12	Other	Retroposon	Retroposon-L1-dep	275	9975576	9975850	+
Lachesis_group0_Retroposon-L1-dep_13	Other	Retroposon	Retroposon-L1-dep	175	18024216	18024390	-
Lachesis_group0_Retroposon-L1-dep_14	Other	Retroposon	Retroposon-L1-dep	296	20475888	20476183	+
Lachesis_group0_Retroposon-L1-dep_15	Other	Retroposon	Retroposon-L1-dep	133	20504240	20504372	+
Lachesis_group0_Retroposon-L1-dep_16	Other	Retroposon	Retroposon-L1-dep	248	27157921	27158168	-
Lachesis_group0_Retroposon-L1-dep_17	Other	Retroposon	Retroposon-L1-dep	248	27389203	27389450	+
Lachesis_group0_Retroposon-L1-dep_18	Other	Retroposon	Retroposon-L1-dep	356	28910851	28911206	-
Lachesis_group0_Retroposon-L1-dep_19	Other	Retroposon	Retroposon-L1-dep	405	35666546	35666950	-
Lachesis_group1_Retroposon-L1-dep_20	Other	Retroposon	Retroposon-L1-dep	302	331883	332184	-

Isatis indigotica (v1.0)

ID:

Contig00001_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

318

Start:

35724

End:

36041

Strand:

-

>Contig00001_Retroposon-L1-dep_1

CAAAGAAATCCTTGAACTTGGATTGCGGAAATGCCTAGTAGGATCCTCAACTCTTAAAGACACTCGCAAAACCAACTTTAAACACCTACATCCAAAAGATTGGCCACATCTTCGTAATAGAAGAACTGGAGATCGACCCTACTACATCGTCTTGAAGACTTGAACCAAATCCTGAAACCAAAAAAGTTCACATGAAAGAGCTTAGATGCCTCTGCAGCAAGGTACCACCCACTAGACGAAAGCCCAAGAAAGTAACCAACACAAACACTAAGCACCAGAAACTTGAGATGGCCAAAACGGAGAAGCACTAGGAACCAA

Isatis indigotica (v1.0)

ID:

Contig00026_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

284

Start:

19912

End:

20195

Strand:

+

>Contig00026_Retroposon-L1-dep_2

AAGACGAAGCAGCGGTTTCGGTCTTCCGCTCTTCTCTTGCGAGGAGGTGACCATTCTCTTGCTTGTAGATGGTTTAGTTTGGGTACACGAGTTTCCGCGTGTAAGAGCTGTTGGTCCTTTGTGTCGTTTTCCATTCCTGGAGTTTCGAAGTTCGACTTTGTGCCTGCTGTTTCGTGTGGCTAGTTTTCTTGGAGTTACCGTGGTTGGTAGTAGTTTATTGGCTTTGTGATTGCCTTGGTGGTCTGGTTGTTTCTGCTTGTGCTGTAGCTGTGGAGATGATTTTG

Isatis indigotica (v1.0)

ID:

Contig00097_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

186

Start:

872

End:

1057

Strand:

+

>Contig00097_Retroposon-L1-dep_3

CTGTGGAGGTTCCTACTATACCTCCTCTTTATCTTTACCAGTTCGGGAGTTTGGTTTCTAGACGAAGTAGTGGGTTCGATCTTCAGATCTTCTCTTGCGAGGAGATGAGCAGTCATTATTCTCTAGGTCAGATAGCTGGTTCATGAGTGTCCGCGTGTAAGTTCTTTTCTTCTATGGTGTTTTTCC

Isatis indigotica (v1.0)

ID:

Contig00106_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

215

Start:

23092

End:

23306

Strand:

+

>Contig00106_Retroposon-L1-dep_4

CTGTGGAGACATCTACTGCCTTGCTCTGTGATTTTTGTGGGGTTAGGTTTCAAGACGAAGCAGTGGCAGTGATCTTCAGTTCTTCTCTTGCGAGGAGGTGACCATACTCTTGCTTGTAGGTGTTTGAGTGTGGGTCCACAAGTGTCCGCGTGCAAGAGGTGTTGATCTTTTCAGTCGTTTTCCCTTCCTGGAGTTCAAGGTTTGTCTTGGTGCCT

Isatis indigotica (v1.0)

ID:

Contig00147_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

318

Start:

17256

End:

17573

Strand:

+

>Contig00147_Retroposon-L1-dep_5

TTGGTTCCTAGTGCTTCTCCGTTTTGGCCATCTCAAGTTTCTGGTGCTTAGTGTTTGTGTTGGTTACTTTCTTGGGCTTTCGTCTAGTGGGTGGTACCTTGCTGCAGAGGCATCTAAGCTCTTTCATGTGAACTTTTTTGGTTTCAGGATTTGGTTCAAGTCTTCAAGACGATGTAGTAGGGTCGATCTCCAGTTCTTCTATTACGAAGATGTGGCCAATCTTTTGGATGTAGGTGTTTAAAGTTGGTTTTGCGAGTGTCTTTAAGAGTTGAGGATCCTACTAGGCATTTCCGCAATCCAAGTTCAAGGATTTCTTTG

Isatis indigotica (v1.0)

ID:

Contig00871_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

233

Start:

60402

End:

60634

Strand:

+

>Contig00871_Retroposon-L1-dep_6

AGGTCTCTTTGGTGGGGTTCGATTTTTGGATGTTTTGTTGCTGTGGAGACATCTACTTGCCTAGCTCTGTGATTTGTTGTGGAGTTAGGTTTCAAGACGAAGCAGTGGCAGCGATCTTCAGTTCTTCTCTTGCGAGGAGGTGACCATACTCTTGCGAGGAGGTGTTTGAGTGTGGGTCCACGAGTGTCCGCGTGCAAGAGGTGTTGATCTTTTCTGTCGTTTTCCCTTCTTCG

Isatis indigotica (v1.0)

ID:

Contig00930_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

367

Start:

13657

End:

14023

Strand:

+

>Contig00930_Retroposon-L1-dep_7

AGGTCTCGTTGGTGGGGTTCGATTTTTGGATGGTATTCTGCTGTGGAGGTATCTACTTGCTTCTTCTCTGTGCTTTTGGTGTGGAGTTAGGTAACAAGACGAAGCGGTGGTTTCGGTCTTCAGCTCTTCTCTTGCGAGGAGGTGACCATTCTCTTGCTTGTAGATGGGTGAGTTTGGGTTCACGAGTGTCCGCGTGTAAGAGTTGTTGATCCTTTGTGTTGTTTTCCCTTCCTGGAGTTTCGAAGTTCGACTTTGTGCCTGCTGGTTCGTGTGGCTCGTTTGCTTGGAGTTTCCGTGGTTGGTAGTAGTTTATTGGCTTTGTGATTGCCTTGGTGGTCTGGTTGTTTCTGCTTGTGCTGTAGCCGTG

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

356

Start:

2026619

End:

2026974

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_8

CTAAACATAACTACACCAAGAATCTTGAGGCTCACAAACCAGTCAACGGCACAAGGAAAGCCCTTGAACCTCCGCTTGGGAAAAACGTCGATTAAGACCAACCAGTCTTACACGCGGACCCTCATGTACCCAATCTCACCCATCTACAGGCATAAGACTGGTCACCTCCTCGCAAGAGAAGACCAGAAGAACGATACCACTGCAACGTCCTAAAACCACTGTCCAAAGTCCAAAAACTCAAGAAAGAGGCTGGTAGATGTCTTTGCAGCAAAATACCATCAGAAAGACGAAACCTAAACCCGAGACCGAGACAGCCGCAAAACCACAAAAACTTACCGAGAAGAGCAAGAGCAGAA

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

260

Start:

6777084

End:

6777343

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_9

AGGTCTCATTGGTGGGGTTCATTGTTTGGATGGGTTGCTGCTGTAGAGACACCTGCTTGCTTCTCTTCTGTGACTCTGTTGTGGAGTTAGGTATCAAGACGAAGCAGTTGTTTCGGTCTTCAGTTCTTCTCTTGCGAGGAGGTGACCATTCTTTTTCTTGTAGGTGTTTGAGTTTGGGTACATGAGTGTCCGCGTGTAAGAGCTGTTGATCCTTTTCGATGTTTTCCCCACCAGGAGTTTTAAGGTTTGACTTGGTGCCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

324

Start:

8427181

End:

8427504

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_10

ACTACACCAACAAACCGCTCCAAAGAAACCAAGCCTTCGAGATAAACCGAGGCTCAAGGAAAAACCTTGACTTCAAACTGGAAAAACGCCAAAGAGGAAAATCAACTCTTACACGCTGACACTCGTAAACCAATCACAGCCACTTACAGAATAGAGAATGGTCACCTCCTCGCAAGAGAAAAGATGATAAACGGAACCACTGCTTAGTCTTGAGCTCAAACCCAAAACCCATAAAGGCTTTAGAAACAAGCTAGTAGATGCCACCACAACGATTTCTCATCCGAATGACGAAACCAGACGAAGACCTAGACCACCTCTCAACAC

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

192

Start:

8675782

End:

8675973

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_11

CTGCTGTGGAGGTTCCTACTAGATCACTTCTTTATCCTTTTCGGATTAGAAGTTTGGTTTCTAGATGAAGCAGTGGTTTCGATCTTCAGATCTTCTCTTGCGAGGAGGTGAGCAGTCTCTGTTCTGTAGGTCACGTGGCTGTCTCGCGAGTGTCCGCGTGTAAGTTCTGCTGGTCCTCTATGGCGATTTTCC

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

275

Start:

9975576

End:

9975850

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_12

TCGTTTCTTGGATCTCGTCTTTCGGATGGTTTCTTGTTGCAATGGCATATGCTTCTGGATTTTGCTGCTTCTCTTTGATTGGTGGTGGGTTCAAGACTTTGTAGTGGGTTTGGTCTGCAATTCTTCTCTTGCGAGGAGGTGGCTAGTCTTTTGTCTGTAGGTGGCTTTGGCTAGTTTGCGAGTGTCCGCGTGTAAGTGTTGCAGGTCATCTCTGGCGTGTCTCCGTTCGATGGGCAAGGTTGTTTAATTTTCTTCCTTGTACCTTGGTTTTCTCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

175

Start:

18024216

End:

18024390

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_13

GGAAAATCGCCATAGAGGACCAGCAGAACTTACACGCGGACACTCGCGAGACAGCCACGTGACCCACATAACAAAGACTGTTCACCTCCTCGCAAGAGAAGATCTGAACTTCATCTAGAAACCAAACTTCTAATCCGAAAAGGATAAAGAAGTGATCTAGTAGGAACCTCCACAG

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

296

Start:

20475888

End:

20476183

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_14

GGTCTCGGGTTTGGGTTTCGTCTTTCTGATGGTATTCTGCTGCAAAGACATCACCAGCCTCTTTCTTGAGTTTTTGGACTTTGGACAGTGGTTTTAGGACGTTGCAGTGGTATCGTTCTTCTGGTCTTCTCTTGCGAGGAGGTGACCAGTCTTATGCCTGTAGATGGGTGAGATTGGGTACACGAGGGTCCGCGTGTAAGACTGGTTGGTCTTAATCGACGTTTTTCCCAAACAGAGTTTCAAGGGCTTTCCTTGTGCCGTTGACTGGTTTGTGAGCTCAAGATTCTTGGTGTAGT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

133

Start:

20504240

End:

20504372

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_15

CTTCCTTTTTTGGGCTTTAGTTTCTGGAGATTTCTTTGTGTATGCCGACTTAGCTTCCGAGAAAGTGTTGTCTTTCTCCGTGTTGTATTCCACCTTTGTTTTAATGAAATCTTCAGATGACAAAAAAAAAAAA

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

248

Start:

27157921

End:

27158168

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_16

AGAACCTTGACAATCCGTTTGGGTAAACCGTCAATTAAGACCAACCAGTCTTACACGCGGAGATTCGTGTACCCAATCTTACCCATCTACAGGCATAAGATTGGTCACCTCCTCGCAAGAGAAAACCAGATGAATCCCACTGCATCGTCCTGAAACCACTGTCCAAAGTCCAAAAAACTCGAGAAAGAGGGCGGTAGATGTCTTCACAGCAGAATACCATCAGAAAGACGAAACCCAAACCCGAGACC

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_17

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

248

Start:

27389203

End:

27389450

Strand:

+

>Lachesis_group0_Retroposon-L1-dep_17

GGTCTCGGGTTTGGGTTTCGTCTTTCTGATGGTATTCTGCTGTGAAGACATCTACCGCCCTCTTTCTCGAGTTTTTTGGACTTTGGACAGTGGTTTCAGGACGATGCAGTGGGATTCATCTGGTTTTCTCTTGCGAGGAGGTGACCAATCTTATGCCTGTAGATGGGTAAGATTGGGTACACGAATCTCCGCGTGTAAGACTGGTTGGTCTTAATTGACGGTTTACCCAAACGGATTGTCAAGGTTCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_18

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

356

Start:

28910851

End:

28911206

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_18

ACACGAGCAATGAGATGACCATCAGATGAGAAAAGCTCAAAGAAACACTTCGAATATCAACCGGGAAAACGCCAGAAAGGACCAACCACTCTTACACGCAGACACTCGCGTACCAATCTGAGCCACCTACAGACAACAGACCGGCCACCTCCTCGCAAGAGAAGAACAATTGACCAAAAACACTGCACCGTTATTGAGAATCCCTCCAAACCTGAGACAGACATTAGAGGGAAAGCAAGTAGATGCCACTGCAGCACAATACCATCAAAAGGGCGAACCCGAACCGAAGCCTAGCTCAACACAAACCATCAACAAAACACGAGCCCAAGGAGGAGCAGAAGAGCCAGAGATCAATA

Isatis indigotica (v1.0)

ID:

Lachesis_group0_Retroposon-L1-dep_19

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

405

Start:

35666546

End:

35666950

Strand:

-

>Lachesis_group0_Retroposon-L1-dep_19

CAAATTCACCCCACGGCTACAGCACAAGCAGAAACAACCTGACCACCAAGGCAATCACAAAGCCAATAAACTACTACCAACCACAGAAACTCCAAGAAAACGAGCCACACGAACCAGCAGGCACAAAGTCGAACTTCGAAACTCCAGGAAGGGAAAACAACACAAAGGATCAACAACTCTTACACGCGGACACTCGTGAACCCAAACTCACCCATCTACAAGCAAGAGAATGGTCACCTCCTCGCAAGAGAAGAGCTGAAGACCGAAACCACTGCTTCGTCTTGTTACCTAACTCCACTCCAAAAGCACAGAGAAGAAGCAAGTAGATACCTCCACAACAGAATACCATCCAAAAATCGAACCCCACCAACCAGACCTGCTGAACCGCAGAACAGCGAAACCAAG

Isatis indigotica (v1.0)

ID:

Lachesis_group1_Retroposon-L1-dep_20

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

302

Start:

331883

End:

332184

Strand:

-

>Lachesis_group1_Retroposon-L1-dep_20

ACCAACTCGAACACACTAGCATCATGAAGACCATCAGAAGAGAAAGGCTCAAAGAAACACTTTGAACAACAGCCGGGAAAACGCCAGAAAGGACCAATCACTCTTGCACGCGGACACTCGCGTACCAATCTGAGCCACCTACAGACAACAGACTGGCCACCTCCTCGCAAGAGAAGAACAGCTGATCGAAAACACTGCTTCGCCTTTGGCATCCCGCCGAATCTGAGACAGGCATCAGGGGGAAGCAAGTAGATGCCTCAGCAGCACAATACCATCAAAATAGCGAACCCGAACCGAAACCT