Isatis indigotica (v1.0)
ID:
Contig00725_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
112Start:
62313End:
62424Strand:
->Contig00725_LTR-Ngaro_1
TATATATATATATACCTATATACTGTGTAAACTATATGTATGCATAGATACATACATACATATATCTATATAAATTATGAGTGCCAATTCATGTTAGGAAGCTGAAACGCCT
Isatis indigotica (v1.0)
ID:
Lachesis_group0_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
112Start:
33360022End:
33360133Strand:
+>Lachesis_group0_LTR-Ngaro_2
AGGCGTTTCAGCTTCCTAACATGAATTGGCACTCATAATTTATATAGATATATGTATGTATGTATCTATGCATACATATAGTTTACACAGTATATAGGTATATATATATATA
Isatis indigotica (v1.0)
ID:
Lachesis_group1_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
439Start:
8973306End:
8973744Strand:
->Lachesis_group1_LTR-Ngaro_3
AGCTGATTCTGCGGAAGCTGAAATTGCTGCAACTTATGGGGTTGTGGCTGCGACTGTGGCTGCGGGTGCGAATGAGATTGCACTTGCTGCGTTCTTAGCTGCTGCTGTTGTTGTAGCTGCTGACTCTGTTGCTGTAGCGGTTGTTGATGTTGCTGCTGCAGCGGTTGTTGATGATGTTGATGTTGCTGCTGCAGCGGTTGTTGATGATGTTGCTGTTGCTGCTGCAGCGATTGTTGTTGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGATGTTGTTGTTGTTGCTGAGACTGTGATTGCTGTTGCTGATGGTTCAAAGAGGAGTGCAACAATTGCTGCAGCTGCTGTTGTTGAGACAACGTAGTAG
Isatis indigotica (v1.0)
ID:
Lachesis_group1_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
109Start:
14102058End:
14102166Strand:
->Lachesis_group1_LTR-Ngaro_4
GGGGCGGGGACGGAAAACGGCAAAACTAAAAATTTAGAGATACGGGTACGGCAAATATACGTCTACTTATATATATATATGTATATATATATATATTTAAAATATACAG
Isatis indigotica (v1.0)
ID:
Lachesis_group2_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
196Start:
2231154End:
2231349Strand:
->Lachesis_group2_LTR-Ngaro_5
TTGTTCCTGCTGTTGAATCCGCTGCTGCTGCTGCTGAAGCTGAAGCTGATAGAGTTGCTGCTGCTGAAACTGATATTGCTGCTGCTGCTGTTGTTGCTGATGTTGTTGTTGTTGCTGCTGCTGCTGTTGTTGCTGATGTTGTTGTTGCTGCTGCTGCTGTTTCTGTGAATGGATTTGGAGCTGCTGGAGCTGTTGT
Isatis indigotica (v1.0)
ID:
Lachesis_group2_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
246Start:
11446061End:
11446306Strand:
+>Lachesis_group2_LTR-Ngaro_6
CAAATCAGCAACAACAGCAACAACAACAGCTGCAGCAGCACCAACAACAACAGCAACAGCAGCAGCAGCAACAGATCCAGCAGCAGCAGCAGCAACAACAACAACACCACCACCAACAGCAACAGCTGCCACAACTCCAGCAGCAGCAGCAACATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAGCAACAGCAGCATCAGTTGTCACAGCTCCAACATCATCACCAGCAGCAGCAGCAGC
Isatis indigotica (v1.0)
ID:
Lachesis_group2_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
160Start:
36978497End:
36978656Strand:
->Lachesis_group2_LTR-Ngaro_7
GTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCTGTGTCTGTTGTTGATGATGAAACTGTTGCTGCTGGAGGAATAGATG
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
185Start:
9201049End:
9201233Strand:
->Lachesis_group3_LTR-Ngaro_8
GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
191Start:
9204817End:
9205007Strand:
->Lachesis_group3_LTR-Ngaro_9
GGAGGAGAATGTAGGAGACATTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTTTTGTTTCTTGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGTTGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
197Start:
9208524End:
9208720Strand:
->Lachesis_group3_LTR-Ngaro_10
GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCTCCGTTTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
172Start:
9261213End:
9261384Strand:
->Lachesis_group3_LTR-Ngaro_11
GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGTTGTTGTTGAATGAATTGTTGTTGTTGCTGGATTTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCAGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCAGTTGTTGCT
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
143Start:
23214713End:
23214855Strand:
->Lachesis_group3_LTR-Ngaro_12
ACTTGCGCTGTTGCGCATATACACATACACGCATTCACGCATACACAGCATACACAACATAAACACATACACACAACATAAACGCATACACGAATACACAACATAAACGCATATACGAATACACAACATAAACGCATACACAT
Isatis indigotica (v1.0)
ID:
Lachesis_group3_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
150Start:
26217637End:
26217786Strand:
+>Lachesis_group3_LTR-Ngaro_13
TGGTAATAACAACAATGATGGCAACAATGGTAATAACAACAATGATGGCAAAAATGGTAATAACAACAGTGGGAATAACAACAATGGGAATAACAATGACAACAACAATGGGAATAACAATGACAACAACAATGGGAATAACAACAATAG
Isatis indigotica (v1.0)
ID:
Lachesis_group4_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
186Start:
10369441End:
10369626Strand:
->Lachesis_group4_LTR-Ngaro_14
CACACATGCATACCACGTTCACGCACACATGCATATCACGTTCACGCTCACGCGCACATGCATATCACGTTCACGCTCACGCGCACATGCATATAACGTTCACGCTCACGCACACATGCATATCACGTTCACGCTCACGCACACATGCATATCACGTTCACGCTCACGCACACATGCATACACACA
Isatis indigotica (v1.0)
ID:
Lachesis_group5_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
100Start:
14715427End:
14715526Strand:
->Lachesis_group5_LTR-Ngaro_15
GGGGCGGGGACGGGAAACGGCAAAACTAAAAATATAGAGATACGGGTACGGCAAATATATGTCTACATATATATATATATATATATTATTAGAAATATAA
Isatis indigotica (v1.0)
ID:
Lachesis_group5_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
102Start:
33528674End:
33528775Strand:
+>Lachesis_group5_LTR-Ngaro_16
GTTTCTGGGTCGCTTCCATCATCAAGGTAACTTTTAACCTCTTAAATATATATATATATATATATACATCTACGTACACACATATTGATATATATATATATA
Isatis indigotica (v1.0)
ID:
Lachesis_group5_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
112Start:
34184546End:
34184657Strand:
+>Lachesis_group5_LTR-Ngaro_17
ACAGCAGTTGCAGCAATCTCAACACCCACAGGTCTCACAGCAGCAGCAGCAACAACAACAGCAGCAAATACAAATGCAACAACTTTTGTTGCAACGTGCACAGCAACAACAA
Isatis indigotica (v1.0)
ID:
Lachesis_group6_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
125Start:
4518394End:
4518518Strand:
->Lachesis_group6_LTR-Ngaro_18
AGGCTGTTGCCTGTTGCTGCTGTGGTTGTTGAGGCAGCTCATGTTGTTGTAGCTGCTGCTGAGACTGAGCTAGCTGCTGAGGTGGCTGAGACATAGGCTGCTGTAACTGTTGCTGATGCTGCAGC
Isatis indigotica (v1.0)
ID:
Lachesis_group6_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
166Start:
16250071End:
16250236Strand:
->Lachesis_group6_LTR-Ngaro_19
CTGGCTGGCTGGATCGTTCATGGGGAGAAACTGGCTGGCTGGATCGTGCTCGTAGAGAAACTGGCCGGCTGGATCGTTCATGGGGAGAAAATGGCTGGCTGGATCGTGCTCGTAGAGAAACTGGCTGGCTGGATTGTGCATGGATAGAAACTGGCTGGCTGGATAG