ID Class Order Superfamily Length Start End Strand View
Contig00725_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro1126231362424-
Lachesis_group0_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro1123336002233360133+
Lachesis_group1_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro43989733068973744-
Lachesis_group1_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro1091410205814102166-
Lachesis_group2_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro19622311542231349-
Lachesis_group2_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro2461144606111446306+
Lachesis_group2_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro1603697849736978656-
Lachesis_group3_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro18592010499201233-
Lachesis_group3_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro19192048179205007-
Lachesis_group3_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro19792085249208720-
Lachesis_group3_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro17292612139261384-
Lachesis_group3_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro1432321471323214855-
Lachesis_group3_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro1502621763726217786+
Lachesis_group4_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro1861036944110369626-
Lachesis_group5_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro1001471542714715526-
Lachesis_group5_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro1023352867433528775+
Lachesis_group5_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro1123418454634184657+
Lachesis_group6_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro12545183944518518-
Lachesis_group6_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro1661625007116250236-

< 1 > Total 1


Isatis indigotica (v1.0)

ID:

Contig00725_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

112

Start:

62313  

End:

62424

Strand:

-

>Contig00725_LTR-Ngaro_1

TATATATATATATACCTATATACTGTGTAAACTATATGTATGCATAGATACATACATACATATATCTATATAAATTATGAGTGCCAATTCATGTTAGGAAGCTGAAACGCCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

112

Start:

33360022  

End:

33360133

Strand:

+

>Lachesis_group0_LTR-Ngaro_2

AGGCGTTTCAGCTTCCTAACATGAATTGGCACTCATAATTTATATAGATATATGTATGTATGTATCTATGCATACATATAGTTTACACAGTATATAGGTATATATATATATA

Isatis indigotica (v1.0)

ID:

Lachesis_group1_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

439

Start:

8973306  

End:

8973744

Strand:

-

>Lachesis_group1_LTR-Ngaro_3

AGCTGATTCTGCGGAAGCTGAAATTGCTGCAACTTATGGGGTTGTGGCTGCGACTGTGGCTGCGGGTGCGAATGAGATTGCACTTGCTGCGTTCTTAGCTGCTGCTGTTGTTGTAGCTGCTGACTCTGTTGCTGTAGCGGTTGTTGATGTTGCTGCTGCAGCGGTTGTTGATGATGTTGATGTTGCTGCTGCAGCGGTTGTTGATGATGTTGCTGTTGCTGCTGCAGCGATTGTTGTTGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGTTGATGCTGTTGCTGCTGCAGCGATTGATGTTGTTGTTGTTGCTGAGACTGTGATTGCTGTTGCTGATGGTTCAAAGAGGAGTGCAACAATTGCTGCAGCTGCTGTTGTTGAGACAACGTAGTAG

Isatis indigotica (v1.0)

ID:

Lachesis_group1_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

14102058  

End:

14102166

Strand:

-

>Lachesis_group1_LTR-Ngaro_4

GGGGCGGGGACGGAAAACGGCAAAACTAAAAATTTAGAGATACGGGTACGGCAAATATACGTCTACTTATATATATATATGTATATATATATATATTTAAAATATACAG

Isatis indigotica (v1.0)

ID:

Lachesis_group2_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

196

Start:

2231154  

End:

2231349

Strand:

-

>Lachesis_group2_LTR-Ngaro_5

TTGTTCCTGCTGTTGAATCCGCTGCTGCTGCTGCTGAAGCTGAAGCTGATAGAGTTGCTGCTGCTGAAACTGATATTGCTGCTGCTGCTGTTGTTGCTGATGTTGTTGTTGTTGCTGCTGCTGCTGTTGTTGCTGATGTTGTTGTTGCTGCTGCTGCTGTTTCTGTGAATGGATTTGGAGCTGCTGGAGCTGTTGT

Isatis indigotica (v1.0)

ID:

Lachesis_group2_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

246

Start:

11446061  

End:

11446306

Strand:

+

>Lachesis_group2_LTR-Ngaro_6

CAAATCAGCAACAACAGCAACAACAACAGCTGCAGCAGCACCAACAACAACAGCAACAGCAGCAGCAGCAACAGATCCAGCAGCAGCAGCAGCAACAACAACAACACCACCACCAACAGCAACAGCTGCCACAACTCCAGCAGCAGCAGCAACATCAAATGTCACAGCTCCAACATCATCAGCAGCAACAGCAACAGCAGCATCAGTTGTCACAGCTCCAACATCATCACCAGCAGCAGCAGCAGC

Isatis indigotica (v1.0)

ID:

Lachesis_group2_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

160

Start:

36978497  

End:

36978656

Strand:

-

>Lachesis_group2_LTR-Ngaro_7

GTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCTGTGTCTGTTGTTGATGATGAAACTGTTGCTGCTGGAGGAATAGATG

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

185

Start:

9201049  

End:

9201233

Strand:

-

>Lachesis_group3_LTR-Ngaro_8

GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

191

Start:

9204817  

End:

9205007

Strand:

-

>Lachesis_group3_LTR-Ngaro_9

GGAGGAGAATGTAGGAGACATTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTTTTGTTTCTTGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGTTGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

197

Start:

9208524  

End:

9208720

Strand:

-

>Lachesis_group3_LTR-Ngaro_10

GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGCTGTTGTTGAATGAATTGTTGTTGTTGCTGGAATTGCTGGAATTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCTGCTGCTCCGTTTGTTGTTGATGATGAAACTGTTGCTGCTGTTGTTGCTGGAGGAATAGATG

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

172

Start:

9261213  

End:

9261384

Strand:

-

>Lachesis_group3_LTR-Ngaro_11

GGAGGAGAATGTAAGAGACGTTGTTGCTGTTGATGGAATTGCTGTTGTTGTTGAATGAATTGTTGTTGTTGCTGGATTTGCTGGAACTGCATCTCTTGTTGTTGTTGTTGTGGTTGCTGGAATTGCAGCTGCGTCTGTTGTTGATGATGAAACTGTTGCTGCAGTTGTTGCT

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

143

Start:

23214713  

End:

23214855

Strand:

-

>Lachesis_group3_LTR-Ngaro_12

ACTTGCGCTGTTGCGCATATACACATACACGCATTCACGCATACACAGCATACACAACATAAACACATACACACAACATAAACGCATACACGAATACACAACATAAACGCATATACGAATACACAACATAAACGCATACACAT

Isatis indigotica (v1.0)

ID:

Lachesis_group3_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

150

Start:

26217637  

End:

26217786

Strand:

+

>Lachesis_group3_LTR-Ngaro_13

TGGTAATAACAACAATGATGGCAACAATGGTAATAACAACAATGATGGCAAAAATGGTAATAACAACAGTGGGAATAACAACAATGGGAATAACAATGACAACAACAATGGGAATAACAATGACAACAACAATGGGAATAACAACAATAG

Isatis indigotica (v1.0)

ID:

Lachesis_group4_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

186

Start:

10369441  

End:

10369626

Strand:

-

>Lachesis_group4_LTR-Ngaro_14

CACACATGCATACCACGTTCACGCACACATGCATATCACGTTCACGCTCACGCGCACATGCATATCACGTTCACGCTCACGCGCACATGCATATAACGTTCACGCTCACGCACACATGCATATCACGTTCACGCTCACGCACACATGCATATCACGTTCACGCTCACGCACACATGCATACACACA

Isatis indigotica (v1.0)

ID:

Lachesis_group5_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

100

Start:

14715427  

End:

14715526

Strand:

-

>Lachesis_group5_LTR-Ngaro_15

GGGGCGGGGACGGGAAACGGCAAAACTAAAAATATAGAGATACGGGTACGGCAAATATATGTCTACATATATATATATATATATATTATTAGAAATATAA

Isatis indigotica (v1.0)

ID:

Lachesis_group5_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

102

Start:

33528674  

End:

33528775

Strand:

+

>Lachesis_group5_LTR-Ngaro_16

GTTTCTGGGTCGCTTCCATCATCAAGGTAACTTTTAACCTCTTAAATATATATATATATATATATACATCTACGTACACACATATTGATATATATATATATA

Isatis indigotica (v1.0)

ID:

Lachesis_group5_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

112

Start:

34184546  

End:

34184657

Strand:

+

>Lachesis_group5_LTR-Ngaro_17

ACAGCAGTTGCAGCAATCTCAACACCCACAGGTCTCACAGCAGCAGCAGCAACAACAACAGCAGCAAATACAAATGCAACAACTTTTGTTGCAACGTGCACAGCAACAACAA

Isatis indigotica (v1.0)

ID:

Lachesis_group6_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

125

Start:

4518394  

End:

4518518

Strand:

-

>Lachesis_group6_LTR-Ngaro_18

AGGCTGTTGCCTGTTGCTGCTGTGGTTGTTGAGGCAGCTCATGTTGTTGTAGCTGCTGCTGAGACTGAGCTAGCTGCTGAGGTGGCTGAGACATAGGCTGCTGTAACTGTTGCTGATGCTGCAGC

Isatis indigotica (v1.0)

ID:

Lachesis_group6_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

166

Start:

16250071  

End:

16250236

Strand:

-

>Lachesis_group6_LTR-Ngaro_19

CTGGCTGGCTGGATCGTTCATGGGGAGAAACTGGCTGGCTGGATCGTGCTCGTAGAGAAACTGGCCGGCTGGATCGTTCATGGGGAGAAAATGGCTGGCTGGATCGTGCTCGTAGAGAAACTGGCTGGCTGGATTGTGCATGGATAGAAACTGGCTGGCTGGATAG