ID Class Order Superfamily Length Start End Strand View
Contig00001_LTR-Gypsy_1 RetrotransposonsLTRLTR-Gypsy15615170+
Contig00001_LTR-Gypsy_2 RetrotransposonsLTRLTR-Gypsy64110731713-
Contig00001_LTR-Gypsy_3 RetrotransposonsLTRLTR-Gypsy80437554558-
Contig00001_LTR-Gypsy_4 RetrotransposonsLTRLTR-Gypsy44145584998-
Contig00001_LTR-Gypsy_5 RetrotransposonsLTRLTR-Gypsy21859316148+
Contig00001_LTR-Gypsy_6 RetrotransposonsLTRLTR-Gypsy19277657956-
Contig00001_LTR-Gypsy_7 RetrotransposonsLTRLTR-Gypsy26093869645+
Contig00001_LTR-Gypsy_8 RetrotransposonsLTRLTR-Gypsy6741093511608+
Contig00001_LTR-Gypsy_9 RetrotransposonsLTRLTR-Gypsy39532648130433+
Contig00001_LTR-Gypsy_10 RetrotransposonsLTRLTR-Gypsy2913943639726-
Contig00001_LTR-Gypsy_11 RetrotransposonsLTRLTR-Gypsy2693976040028-
Contig00002_LTR-Gypsy_12 RetrotransposonsLTRLTR-Gypsy139461697562-
Contig00002_LTR-Gypsy_13 RetrotransposonsLTRLTR-Gypsy11076707779+
Contig00002_LTR-Gypsy_14 RetrotransposonsLTRLTR-Gypsy38793159701+
Contig00002_LTR-Gypsy_15 RetrotransposonsLTRLTR-Gypsy5101040210911+
Contig00002_LTR-Gypsy_16 RetrotransposonsLTRLTR-Gypsy1441103911182+
Contig00002_LTR-Gypsy_17 RetrotransposonsLTRLTR-Gypsy1001499915098+
Contig00002_LTR-Gypsy_18 RetrotransposonsLTRLTR-Gypsy6581580516462+
Contig00002_LTR-Gypsy_19 RetrotransposonsLTRLTR-Gypsy7931670517497+
Contig00002_LTR-Gypsy_20 RetrotransposonsLTRLTR-Gypsy1721770217873+

< 1 2 3 4 5 > Total 2292


Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

156

Start:

15  

End:

170

Strand:

+

>Contig00001_LTR-Gypsy_1

ATGGTGAGCACTCAGAAATCCAACCATGATGTTATATATCAAATTCAGCCCATTTTGAAGCTATTACAAGTCCAAGAAGTGCCCAAATAAATCACTTAATTTTCTCCATAAGAAAAGTGACGAAAATTAGAGTTCAAGAGTCATTGGAGGCCAAGA

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

641

Start:

1073  

End:

1713

Strand:

-

>Contig00001_LTR-Gypsy_2

GATTGGTGCTTTCCGGCCGGGACCCTCATGTCTTCCTCCTAGATTACGAAGTTAGAGGCACGCTGGAGAGCGTCTTGAATGGTTACCGGTGGGTTTACGATAATTTCCTTTCGGAAGCTCGAGGGATTTACTAGGGACTTCTTTAGGGCATTTATTGTGGCGCTGTCGCTTAGGCCGTCGATTTTTGACACGATCACCTTAAACCTTTCAACGAATTCTCGAAGGCTTTCTTCGGGTCCTTGTGACAGCGAGTAGAGATCTGCGTCGGATGTTGACTGGCTTATGAACAGCGAGTAATGTTTCAGAAAAGCCGCTGACAATTGGTCGAAACCGTTGATCGAGTCTCTTTCCAGTCTTGAGAACCATGACAAGGCTGATCCCTTCAGATGTTCCACGAAGAGGAGGCAGAATCCGGCATCCCTCTCTTCGGGTTTGAATCTGGCCCATCCCATCGCGATGTGGAAGGCCGTCATATGGGCTTTTGGATCGGCCGTTCTGTCGTAGTAGGTGATTCGGATTTTACCGGGGTCAGAAAGTCTAACGCTTGTGATCCTCGAGGTGAACGGGATCTTTTGCATTTCCTCTAAGACGCGGTCAATCTCTGGGGCCGCACTTGTCGCTTTATGGACTTGCGACCTTAC

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

804

Start:

3755  

End:

4558

Strand:

-

>Contig00001_LTR-Gypsy_3

GCTCCACTATGAAGTCAACTAATACTTGCAACTTCTTGCTGGTTCGAGGTCGATATTCAATATCGTACTCCCTGACCTCTATAGCCCGCTTGGCTAGCCTGACTGATTGGCGGGGGCTATGCGAGATGGTTTGCATGGGCTGAGTTGTCATTACTACGATGGTATGATACTGATAGTATGGTCTGCGCTTCCTGGCCGACATTACAACTGCGAGAGCCATCTTTTCCATCGGTGGATACATGGTCTAAGCCTCCAGCAAGGAGTTTCTTACCTAATATATGGGTTTCTATTAAGAGTGTTCCTCTCTTACGAGCACTTTGCTAACTGCGACCCCGGATACTGCTAGGCAAAGGTAGAGTAATTCACCCTCTATTCGTTTCGACAGAATCGGAGGCTAACATAAGTATGCTTTCAGCTGTTTAAATGCCTCCTCGCATTTATTATCCCATATGAATTTTTTGTTTCCTTTAAAAATTTGATAGAAAGGTAAGCATTCGTCAATCCATCTAGAGATGAATCAGTTTAAGGCTGCAATTTGGCCTGTTAACTGCTGGATCACCTTGACCGAGCTTTGAGATTTCATTTCCAAGAAAGCATTTATTTGCTTTTAGTTACCATGTAATCTAGGAAGTCGCTTGAGATGACTCCAAATGTGCACTTGAACAGGTTTAGTTTCATGCCAAATTTGCTTAGTAGGGCGAAACACTCTGACATGTGACCTAAGTGGTCTTCCTCTTTTATTGATTTGACCAGCATGTCGTCAACGTGCACCTCCATGATTTTTCCTAAGAGTTCTGCGAACAT

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

441

Start:

4558  

End:

4998

Strand:

-

>Contig00001_LTR-Gypsy_4

TCTCTTGATCCTCAAGGTGTATCTTAATCTCGTTGTAGCCTGAGAAAGCATCCGTGAAGCTGAGCAGCTGGTAGCCTAAGATTGCTTCCACCAGCCTGTCAATGTGATGTTGTGGGAAGATGTCCTTGGGACAGGCCTTGTTGAGTTCCGTGAAATCTACACATACTTGCCAAGTGCCATTCTTCTTTTTTCACCACGACTGGATTTGTCGGGCAGTCTGGGTATTTCACTTCTTTGATGAATCCGACCTTCAGCAATCTCTCAACCTCATTTTTGACGACCTCAGTTTTATCTGGTCCGAATTGTCTGTGCTTTTGGCATACTGGTTGGTAGACTGGGTCTACATTCAGCTCGTGTGAGATGATATCCAGGTCGATTACAGGCGTGTCTGAGGTTGTCCAAGCGAAAGAGTGTAGATTTTTTTCAGAAAAATATCAACTC

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

218

Start:

5931  

End:

6148

Strand:

+

>Contig00001_LTR-Gypsy_5

TTCTTTTGGTTTTTTTTGGCTTCTAGCTTTTCAATACCTAGGATTTCTATTGTAAGGGAGAAGATCTCTGCCACAACTCTGAGAAGATTTCTGAACCCTAATCTTTTTATTATTATCGATTTCAATGCAGTCTTTTTATATTATTGATTTGTTTTCTTCTTTTATTATGTCTGAGTAGATCTCTTAGTTAGGTTAGGGTTTTCAAAGGAATTCATGAG

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

192

Start:

7765  

End:

7956

Strand:

-

>Contig00001_LTR-Gypsy_6

CTCATGAATTCCTTTGAAAACCCTAACCTAACTAAGAGATCTACTCAGACATAATAAAAGAAGAAAACAAATCAATAATATAAAAAGACTGCATTGAAATCGATAATAATAAAAAGATTAGGGTTCAGAAATCTTCTCAGAGTTGTGGCAGAGATCTTCTCCCTTACAATAGAAATCCTAGGTATTGAAAAG

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

260

Start:

9386  

End:

9645

Strand:

+

>Contig00001_LTR-Gypsy_7

GGCCAAACGATGACTTTCCAAGAAGGAGAAGCCGCCGAAATAGATCACCCGCATAACGATGTACTCGTCATCAACCTTTCGATCGGAGGCCACGAAATACCGTAAGTCTTAGTCGACACAAGAGGAGAGGTGAACATCATATTCCTTGAAACCCTTCGGGGGATGGACACTGGGACCAGGCATCTCACAACCCATCCAAAACCGATGACTGGTTTCTCCGGAAAGACGACAATGACAATAGGGACGATCCAACTCCCCGT

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

674

Start:

10935  

End:

11608

Strand:

+

>Contig00001_LTR-Gypsy_8

TTTGTGTGTTTTCATCATGGTTAGTGAGTAGTTATTCTTTAAGCTTTTGGGTTCGGTAGGTTGATGGTGATTAAGGGTTGATTAGGGAAGTTTAGGGCTAAGAATGTTTAGATCTTTTCTTATTTAGTGTCCTTAATGCTTGATTAGTCTGTTTTAAGTTGGTTTAGATCTTAGGGAATTTTCCATCCACAAGGTGGTTGATGAAATTCCCCAAAGAACTAAATATGAGATTTGCATGCTAGCTCATGTGAGTGATTGCTTAGGATGCTTATTGGTAGATAGAACTGCTTTTTAATGCTTGTTGATTGTCTTTTCACAAATGAGAATTTGGTTTGATTAAATAATTAATTATGGGATTAGTGTCATGAGAATGAATTATTTGTTTAGAGTTCTAAACCTTAGGATCATTGATTGTATGAACTTCCCTAGTTGTCTCTTAATCACTTGAGATCATTAACCTTGACCCAAGGGCTTAGCTTTCTTTATTTGAATCAATTTCTCTGCTTTTATGTGCATTGCTCTGTTTTTACAATCTTCTTTGATCTTGTTTCCTCCTTTTCACTTGTTTGTTTGATCTTGTTAGCATTAGAATCATATCAAAACCCCTGATTGCATTTAGATTAAGCAATTGTCTAAATCTCTAGTGAGTTGGTTTGTTCCCAAATGGATTGATA

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

3953

Start:

26481  

End:

30433

Strand:

+

>Contig00001_LTR-Gypsy_9

CCGCATAACGATCTGCTCGTGATCAGTCTTTCAATTGGAGGATACGAGATACCGAGAGTCTTAGTAGACACTGGAGGAACGGTGAACGTCATATTCCTGGAAACCCTTCGGAAGATGAACATTGAGACCCGCATCTCATAACCCATCCGAAACCGTTGACTGGTTTCTCTCGGAAAAACGACAATGACAATAGGGACGATCCAACTCCCCGTAAAGGCGAAAGGAGTGGAGAAAGACACGAAGTTCTCGGTGACCGATTGCCCGCGAATCTGCGACGCAATCGTAGGAACACCGTGGCTAAACTCAATGAAGGCGATCCCGTCAACTTACCACCTATGCCTGAAATTCCCAACTCCAACCGGAGTGGAAACAATCTGGGGACGGCAGAAAGACTCTCGAGCTTGTTTCCTAACCGAACACAGATTGAGGAAACCAGTAACCGACCTCAGCCGTCAGCCGCAGTCCGAAAGAGGAAAAGAAGAGCGGCAGCTGGCGAAACTCGAGCAAAAGTTACAGATCGAAGAATCCCGGGAAACGGAGAAGGATCCCCCGTGTGAGCCAGTGATTTCGGTCAACATAGACGAAAAGAATCCCGAGCGATGTACAGAGATCGGAGCAAATTTGGAGGAGCCGATCAAGACTGAGTTAATCACCTTGTTAAAGGAGAACGCCGGATCGTTCGCATGGGCAGCAGAAGATATGCCTGGGATCGACATCGGCATCACAAGCCACGAACTCAACGTAGACCCGACGTTCAAACCGGTGAAGCAGAAAAGGCGGAAACTCGGTCCAGAACGCGCCCAGACGGTGAACGATGAAGTAGAAAGATTGCTCAAAGTCGGGTCAATCACGGAAGTGAAATATCCCGACTGGTTAGCAAATCCGGTGGTGGTAAAGAAGAAGAATGGAAAATGGCGAGTTTGCGTCGATTTCACGGACCTGAATAAAGCGTGCCCAAAAGACAGCTTCCCCCTTCCTCACATCGATCGATTAGTCGAAGCGACGGCAGGGAACAAGCTGCTATCATTCATGGACGCTTTCTCCGGATACAACCAAATCATGATGAACCCCGACGATCGAGACAAGACTGCGTTCACCACAGATCGCGGAATATACTGTTATAAGGTGATGCCATTCGGGTTAAAGAATGCCAGCGCTACATACCAAAGGCTCGTCAACAAAATGTTCGCCGAACAACTCGGAAGAACGATGGAAGTCTACATCGACGATATGTTGGTCAAGTCGTTGGAGGAGAAAGACCACGTCAAACACTTGCGGGAATGCTTTGAACAACTCAACGGCACAACATGAATTAAACCCGGCAAGTGCAGATTCGGAGTAGCATCCGGTGAATTCCTCGGGTATCTGGTAACTCATCGAGGGATAGAAGCAAACCCGAAGCAAATTAACGCTTTGATAGAGATGGCCTCACCAAAACCCAGAGAGAAATCCAAAGATTGACCGGACGGGTCGCGACGCTAAATCGGTTCATCTCGAGGTCAACGGACAAATGTTTGCCTTTCTACGACACACTCAGGGGAAACAAAAAGTTTGAGTGGACAGAGAAGTGTGAACAGGCGTTCCAAGAACTAAAGAAATACCTAGCAAGCCCGCCCGTACTTTCGAAGCCGGTCGAAGGAGAGCCCCTTTTTCTGTATACAGCGGTATCATCGACGGCGGTAGCGGGGTGCTGGTCAGAGAAGATCACAACGAGCAAAAACCGGTCTTCTATGTGAGCCAGACCCTGCGGACGCAGACAGAACCCGATACCCGCTGATGGAGAAGGCGGCCTTGGCAGTGGTGATGTGCGCACGGAAATTACGGCCTTATTTCCAGTCGCACACGATCATTTTACTCACGGTTTTTCCTCTCAGAATGACCTGCACAGTCCCAGTCATCGGGACGTCTGGCAAAATGGGCGGTAGAATTAAGCGAGTACGATATCGAGTACCGGAGTAGAACATGCGCCAAATCACAGGTCTTGCAGATTTTTTGATTGAGCTCCCGACCACAGGCGTTAGTGAGCCGACGTCAAACTCGACGTGGGTTCTCCACGCAGACGGGTCTTCGTCAAAGCAAGGTTCGGGAGTCGGGGTGCGGTTAACGTCACCACTGGGGAAATCTTAGAACAGTCGTTCAGGTTGCTCTTCAACGCTTCCACAACGAAGCGGAGTACGAAGCCTTGATCGCTGGACTGAAACTCGCCCTCGGACTCAAAATCCAAAATCTGCAAGCATTTTGCGATTCTCAGCTGGTGGCAAATCAATTCAGCGGAGACTATGAAGCAAAAGACGACCGGATGGAAGCATACTCTCAAAATTGTTCGGGAGCTCGCAAAACAATTCAAAAATTCGAACTCACAAGAATCCCGCGAGGAGAAAACGCCCCGGCCGATGCATTGGCGGCCCTAGCATCAACGTCTGCCCCGGGAGAAAGTCGAATCATTCCCGTCGAATTCATAGAACAACCAAGCATCGATCCACCACAAGTCATCAACCTTATACAACTCCCGGAAGGAGAAGACTTAGAAGAGCCTCCGGAAGAAGAGTTAACAACTGGTCCAAAAGAATATGGCTGCGATCGCGGGTGGATGGCTCCGATACGAACATACATCATGGACGGGGAAGTCCCGGCGGACAAATGGGCTGCACGAAAACTAAAGGCCCAAGCGGCCCCGCTTCGTTCTCCTCGACGGCAACATCTACAAATGGAGGATCTCCGGACCATTAATGGCTGCGTGGAAAAAGGAGGCAAGACGAATTATGTAAGAAGTCCATAGTGGATCGTGCGGAAATCACTCCGGAGGAAGAGCTCTCGCATCAAAATCAAGCGGCATGGACACTATTGGCCAACCATGATAAAAGATTGCGAGAAGTTCTCCCTCAAGTGCGAGAAATGCCAGAGGCACGCACCAGTGATCCATCAGCCTGCAGAACTGCTCTCGTCAATTTCTCTGCGCCGTACCCGTTCATGAGTGGTCGATGGATATCGTGGGGCCAATGCATAACTCAAAGCAGAAAAGGTTCCTACTTGTCCTAACAGATTACTTTCAAAATGGTCGAAGCGGACTCTTACGCCAGTATCAAGGACGCCCATGGAGCATTTCGTCTGAAAAACATCATATGCCGGCACGGAGTCCCTTACGAGATCGTCACGGACAATGGTTCTCAATTCATTTCCACCCGCTTCGAAGGATTTTGCGAAAAGTGGAAGATACGCCTGAGCAAGTCAACCCACGTTATCCGCAGGGTAATGGCCAGGCCGAAGCAGCCAACAAGACTATCGTTGACGGACTCAAAAAGCATCTTGACGAGAAGAAAGGGCGATGGCGGACGAACTCGAAGGGGTGCTCTGGTCCCATCGGACAACTCCAGACGCGCAACCGGAGAAACGCCATTCGCACTGGTCTACGGTGCCGAATGCGTTATACCGTCAGAAGTAGACTTTCCCGGCGTCAGACCAAGGCTCTTGCCCGGACAGGAAGGCTTAATCATCTGATGATGTTAGCCGAACCGGACCTAATAAACGAAAGACGGAATCAAGCCCTCATCCGCATCCAAAACTATCAACAAGCAGCGGCCAAATACTACAACTCAAACGTGCCACACCGCAAATTCAAGGAAGGAGACCTCGTCCTCCGCAAAGTTTTCCAGAACACCGCGGAGCCGAATGCAGGAAATTAGGCGTGAAATGGGAAGGACCGTACAAAGTAGCAAAGGTGGTCCGTCCAGGAGCGTACGAGCTAGAAAACAAAGAAGGGAAGCCAGTCCCAAGGACATGGAACGCAATGCACCTAAAGAAGTATTACCACTAGACGTTGTAAAATAGAACTACGAACGGCTTGATCCCTATATTCAGGGTACGTAGGCAGCTCGCCTTCCGACGAGTTCAGCTATTTATATTTCATAATTTTCAAGGGGGAATGGGTCCGTATATACATACTCCCAAATTTT

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

291

Start:

39436  

End:

39726

Strand:

-

>Contig00001_LTR-Gypsy_10

AGTGATACCGTTTAAGATTGTAAGAATTCGTAGCCCGAGGTACATCCTCACCATCAATGGTTTGTAAGGGTTAGACTCCATGTTTGACCTTCTTCACGATTAAGTATGGCCCTTCCCACTTAGCACCGAGTTTATCAGCTTTAAGCTCCTTGGTGTTTTTGAATACTAATCGTAGAACCAAATCTCCCTCGTCAAGGGGGTGATCCTGAACTCTTTTTGTCGTAGTATCCATATGCGACTTGTTGATAATTCTGAATCTGGAGTAATGCATGATCTCAGAGTTCTTCGATT

Isatis indigotica (v1.0)

ID:

Contig00001_LTR-Gypsy_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

269

Start:

39760  

End:

40028

Strand:

-

>Contig00001_LTR-Gypsy_11

CTCCGCAGGTGACATGGCTTCCACTCCATCAGAGAGTGAAAAGGAGTTAGTCCAGATGCGCTTCAGGTAGTCGTTTAATGAGACTACAATACTCCATCCAATTCATCTGACCAACGTCCCTTTTCCGTCCGAAGTCTCTTTCTTATCCTTGCTACATTTTTTAATTAGTAGCCTCAGCTTGTCCATTCCCTTGAGAATAACTCGGAGTCGATTAATTCAGACAAATCCCTCACTTTTCGCAGAAAGCTTCGAAGTCGCTTGAAATAAAT

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1394

Start:

6169  

End:

7562

Strand:

-

>Contig00002_LTR-Gypsy_12

TCATTTTCTCCCCCTTGAGAAGGTTCTGACCTCAGAACAGTTTCATCTGCATCATAAGGAACTAAATCAGCAACATTAAAAGTTGTAGACACATTGTACTCACCTGGAAGCTCCAGCTTGTAGGCATTGTCATTGATCTTTTCTGAAACTCGGAATGGTCCATCTCCCCTTGGTGCAAGCTTGAATTTCTTTGCGTGGGGAAATGCTCCTGTCTCATGTGTAGCCACACCCAGTCTGTGGCTCAAACGTAATCTCCTTACACCCTTTGTTAGCCTTGGCCTTGTACACCTCAGACTTCTTTTCTAAGCTCTCTTTTACTTGTTGATGAAGTTTCTTCACAAACGTGGCTTTGGTCTCTGCATCTGGACTTAAATAGATAGCTTGCGGTAGTGTAATAAGATCTAAAGGGGTAAGAGGATTGAATCCATACACAACTTCAAAAGGAGAGTGGTTAGTAGCAGAGTGTTTGGCATGGTTATAAGAAAATTCAATGAAAGGCAAACAACTCAACCAATTCTTAAGATTCTTACCAACCGTGGCTCTCAACAAGGTGGAGAGTGTGCGGTTTACTACCTCGGTTTGCCATCTGTTTGAGGATGGCAAGTTGTAGAGAATAAGAGCTCGGTGCCAAGATTCTTCCACAATGTCTTCCAGAAATGGCTTAGGAACTTTGTGTCACGATCAGAGACAATCATTCTTGGCACTCCATGTAAGCGCACAACCTCCTTAAAGAATAGATCAGCCGTTTGTGTCGCATCATTGGTCTTTTCACATGGTATGAAATGTGCCATCTTGGAGAACCTGTCTACTACTACAAAAATGGAATCTTTGTGGTGTATCTTAGGCAAGCCTAGAACAAAGTCAATAGAAATGTCCACCCATGGTGCGTTAGGAATTGGTAAAGGCATGTATAAACCATTATGATGTAACTTGGATTTGGCTTTGAGACATGTAACTCATTTGGCACATAGCTTCTCCACATCTCTTCTCATGTGCGGCCAATAAAAGTGCTCCATCAACACGCTCAAAGTTTTGTCTCTACCAAAGTGCCCCATCAAACCTCCACCGTGAGCCTCTCTTGTGATTAGTTCCCTCATGGAGCCTTGTGAAATGCACAATCGCTTCTCCTTGAACAGGAACCCATCTTATTGGTAGAAAACTCCAAATGCAGCTTTAGTAGTGTCTTTATAAAGCTCTTGCAAGTGTGGATCAGCTTCATATGCCTCCTTAATATGCTCAAATCCCATGATCTTAGCTTCCATGGTGGAGATGAGAATGTGATGCCTTGAAAGAGCATCGGCTACGACATTCTCCTTTCCCTTTTTGTACTTGATCACATATGGGAATGTCTCCACAAACTCCAGCCACCTAGCATGCATCTTCTTAAGTGTAGT

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

110

Start:

7670  

End:

7779

Strand:

+

>Contig00002_LTR-Gypsy_13

GACAGATGAACTAAATGGGCTTTGACCATTTGTACTCTTTTACCTTATCCTTGGTTTTGTCCCAAAGGGTTTTACGGGAAAGGTTTTAACGAGGCAAATTGGTTCACTTT

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

387

Start:

9315  

End:

9701

Strand:

+

>Contig00002_LTR-Gypsy_14

TGAGATCTCAATTCCACAAGGCGACCAGTGCGGCTCCCGAGATCGACAGAGGAAACTCAGAAGATTCCCTTCACTTCTAGAATCACAAGCGTGAGACTCCCCGACCCCGGCAAACTCAAGATCCCGTTCTACGACGGAACGACGGATACGAAGGCGCATATGACGGCCTTCCATATCGCAATGAGTCGGACCAAATTCAACCCCGAGGAGAAAGGCGCTGGCTTCTGTCTCTTATTCGTCGAGCACTTAAAAAGAACAGCTTTATCATGGTTCTCACGGTTGGAAAGAGACTCGATCGACAACTTCGAGCAGCTATCCGCGGCCTTCTTAAAGCATTATTCGCTTTTCATAAGCCGCTCAACGTCCGACGCGGATCTCTACTCGTTA

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

510

Start:

10402  

End:

10911

Strand:

+

>Contig00002_LTR-Gypsy_15

CTTTCACCGAGGAGGATGCCGAAGGACTCGATCAGCCCCACGACGATCCCTTGGTCGTAGAACTATACATTAACGACCACGACGTGTCAAGGGTATTGATCGACACCAGAAGTTCGGTAGATGTCATATTCCGGGAGACACTCCGAAGAATGAACATGGACCTATTAGAAGTGAAGCCAAATCCTAGATCACTCACTGGATTTTCCGGGGAAGTCACTATGACCGATAGGACGATCCAACTCCCGGTCCACGCTGGCGGAATCACGAAGGTCGTAAATTTTGCGGTGGCTAATCATCCCGCAATCTACAACGTTATCATGGAAACCCCGGGGATCAAATCGATGCGAGCAATCCCGTCGACGTACCATCTTTGTCTGAAGTTCCCGACTCCTAGCGGAATCAAGACTATCTGAGGAAACCAAAAAGAAGCCCGGATGTGTTTCCTTGCGGAACATAAACTCCGTAATCCGACCGTCCAGCAAAGAGAAACCCTGAAACGAAAGAAAGAAG

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

144

Start:

11039  

End:

11182

Strand:

+

>Contig00002_LTR-Gypsy_16

GACTTGATCCCTTCTCACAAAGGATACGTAGGCAGCTCGCTTAAAAAACGAGTTCAGTTACCCCCTCCATAAAAAGGGGGGGGGGGGGGGGGGGGGGGAGGGAGTGAGTCCGTATATACATACTCCCGAAGAAATTCTTGCAAA

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

100

Start:

14999  

End:

15098

Strand:

+

>Contig00002_LTR-Gypsy_17

GTTTGGCGCCGTCTGTGGGGACGAGAAATATTCTTAACCCTAAGAACGAAAAGGATTCGGAACGAAGACAATGACCAGAAGAACCGACGATATCACCAAC

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

658

Start:

15805  

End:

16462

Strand:

+

>Contig00002_LTR-Gypsy_18

AGATGAAGGAGGTAAGGTCGCAAGTCCATAAAGCGACAAGTGCGGCCCCGGAGATTGATCGTGTCCTAGAGGAAACGCAAAAGATCCCGTTCACTTCAAGGATCACTAGCGTTAGACTTTCTGACCCGGGAAAAATCCGAATTCCCTTCTACGACGGGACGACTGATCCGAAGGCCCATATGACAGCCTTCAACATCGCTATGGGACGGGCTAGATTCAAACCCGAAGAGAGAGACGCGGGATGCTGCCTCCTCTTCGTGGAACATCTGAAAGGATCAGCCCTGTCATGGTTCTCAAGGCTAGACAGAGATTCAATCGACGGTTTTGAACAACTGTCAGCAGCCTTCCTGAAACACTACTCACTGTTCATAAGACAGTCGACATCCGACGCGGACCTCTACTCACTGTCGCAGGAGCCCGAAGAAATCCTCCGAGATTTCATCGAAAGGTTTAAGGTGATTGTCTCAAAAATTGACGGACTAAGCAACAGCGCCGCGATCAACGCCCTGAAGAAGTCCTTGCTGAAGACTTCGAACTTCCGAAAGGAGATTACCGTGAACCCACCAGTCACCATTCAAGATGCTCTCCACCGTGCTTCCAACTTCGTCATCTACGAGGAAGACATGAGGGTCCCAACCGGAAAGCACCAATCCTCAAA

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

793

Start:

16705  

End:

17497

Strand:

+

>Contig00002_LTR-Gypsy_19

TCGAAAGGAGGCTCGCGGCAAAGCTGTTAGCCGGGGAGCTCGGAAACGGAGTGACCCTCGAGAGTCTCGGAGCTATCGAAGAAGATGCTGGCGCCCCGAACGGGCGACCTAACCAGGAAGTCCCGAAAGGCCCGACGAGGATACCCCCAAACGAGGAAGGATACCAAACGGAGACGACTCCGCCGCCAACCGAAGAAGGATCCACATGATCATCGGAGGATCTCAGTACTGCCGGGACATAGTGGTCTCGATAAAAGCGTTCCTGAGAAGAGGAGACAAGGAGTCAAAACCGCGGGAACCGATCACCGAAAACGATGATCGTATCGCCTTTTAAGAAAAAGACGCCGAAGGCCTTGACCAACCTCACGACGATCCATTGGTGGTAGAGTTGGATATCAACGACCATGACGTCTCACGAGTCTTGATCGACACCGGAAGTTCGGTGGACGTCATTTTTCGAGAGACACTTCAAAGGATGAAGGTGGATCCGTCAAGATAACGCCCAGTCCGAGATCGCTGACCGGATTCTCTGGCGAAGTCACAATGACGGATGGAACAATCCAGCTCCCGTTCGTGCCGGCGGAATCACGAAAATCGTTAACTTCGCGGTGGCAAACCACCCCGCAATTTATAACGTGATAATGGGGACTCCCTGGATCAATTCAATGCGAGTTATCCCATCGACTTACCATCTCTGCCTGAAGTTCCCGACACCAAACAGAATCAAGACCATTTGGGGAAATCAGAAGGAGGCACGGATCTGTTTTCTGGCAGAGCACAAGCTCCGGAATCC

Isatis indigotica (v1.0)

ID:

Contig00002_LTR-Gypsy_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

172

Start:

17702  

End:

17873

Strand:

+

>Contig00002_LTR-Gypsy_20

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAACTACGGGTGACTTGATCCCTTTTCACGAAGGGTACGTAGGCAGCTCGCTTAAAAAACGAGTTCAGTTGCCTCTCTCTTTAAAAAAGGGGGGGAGTGGGTCCGTATATACATACTCCCAAATTTTCGCAAATTTTC