Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
156Start:
15End:
170Strand:
+>Contig00001_LTR-Gypsy_1
ATGGTGAGCACTCAGAAATCCAACCATGATGTTATATATCAAATTCAGCCCATTTTGAAGCTATTACAAGTCCAAGAAGTGCCCAAATAAATCACTTAATTTTCTCCATAAGAAAAGTGACGAAAATTAGAGTTCAAGAGTCATTGGAGGCCAAGA
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
641Start:
1073End:
1713Strand:
->Contig00001_LTR-Gypsy_2
GATTGGTGCTTTCCGGCCGGGACCCTCATGTCTTCCTCCTAGATTACGAAGTTAGAGGCACGCTGGAGAGCGTCTTGAATGGTTACCGGTGGGTTTACGATAATTTCCTTTCGGAAGCTCGAGGGATTTACTAGGGACTTCTTTAGGGCATTTATTGTGGCGCTGTCGCTTAGGCCGTCGATTTTTGACACGATCACCTTAAACCTTTCAACGAATTCTCGAAGGCTTTCTTCGGGTCCTTGTGACAGCGAGTAGAGATCTGCGTCGGATGTTGACTGGCTTATGAACAGCGAGTAATGTTTCAGAAAAGCCGCTGACAATTGGTCGAAACCGTTGATCGAGTCTCTTTCCAGTCTTGAGAACCATGACAAGGCTGATCCCTTCAGATGTTCCACGAAGAGGAGGCAGAATCCGGCATCCCTCTCTTCGGGTTTGAATCTGGCCCATCCCATCGCGATGTGGAAGGCCGTCATATGGGCTTTTGGATCGGCCGTTCTGTCGTAGTAGGTGATTCGGATTTTACCGGGGTCAGAAAGTCTAACGCTTGTGATCCTCGAGGTGAACGGGATCTTTTGCATTTCCTCTAAGACGCGGTCAATCTCTGGGGCCGCACTTGTCGCTTTATGGACTTGCGACCTTAC
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
804Start:
3755End:
4558Strand:
->Contig00001_LTR-Gypsy_3
GCTCCACTATGAAGTCAACTAATACTTGCAACTTCTTGCTGGTTCGAGGTCGATATTCAATATCGTACTCCCTGACCTCTATAGCCCGCTTGGCTAGCCTGACTGATTGGCGGGGGCTATGCGAGATGGTTTGCATGGGCTGAGTTGTCATTACTACGATGGTATGATACTGATAGTATGGTCTGCGCTTCCTGGCCGACATTACAACTGCGAGAGCCATCTTTTCCATCGGTGGATACATGGTCTAAGCCTCCAGCAAGGAGTTTCTTACCTAATATATGGGTTTCTATTAAGAGTGTTCCTCTCTTACGAGCACTTTGCTAACTGCGACCCCGGATACTGCTAGGCAAAGGTAGAGTAATTCACCCTCTATTCGTTTCGACAGAATCGGAGGCTAACATAAGTATGCTTTCAGCTGTTTAAATGCCTCCTCGCATTTATTATCCCATATGAATTTTTTGTTTCCTTTAAAAATTTGATAGAAAGGTAAGCATTCGTCAATCCATCTAGAGATGAATCAGTTTAAGGCTGCAATTTGGCCTGTTAACTGCTGGATCACCTTGACCGAGCTTTGAGATTTCATTTCCAAGAAAGCATTTATTTGCTTTTAGTTACCATGTAATCTAGGAAGTCGCTTGAGATGACTCCAAATGTGCACTTGAACAGGTTTAGTTTCATGCCAAATTTGCTTAGTAGGGCGAAACACTCTGACATGTGACCTAAGTGGTCTTCCTCTTTTATTGATTTGACCAGCATGTCGTCAACGTGCACCTCCATGATTTTTCCTAAGAGTTCTGCGAACAT
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
441Start:
4558End:
4998Strand:
->Contig00001_LTR-Gypsy_4
TCTCTTGATCCTCAAGGTGTATCTTAATCTCGTTGTAGCCTGAGAAAGCATCCGTGAAGCTGAGCAGCTGGTAGCCTAAGATTGCTTCCACCAGCCTGTCAATGTGATGTTGTGGGAAGATGTCCTTGGGACAGGCCTTGTTGAGTTCCGTGAAATCTACACATACTTGCCAAGTGCCATTCTTCTTTTTTCACCACGACTGGATTTGTCGGGCAGTCTGGGTATTTCACTTCTTTGATGAATCCGACCTTCAGCAATCTCTCAACCTCATTTTTGACGACCTCAGTTTTATCTGGTCCGAATTGTCTGTGCTTTTGGCATACTGGTTGGTAGACTGGGTCTACATTCAGCTCGTGTGAGATGATATCCAGGTCGATTACAGGCGTGTCTGAGGTTGTCCAAGCGAAAGAGTGTAGATTTTTTTCAGAAAAATATCAACTC
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
218Start:
5931End:
6148Strand:
+>Contig00001_LTR-Gypsy_5
TTCTTTTGGTTTTTTTTGGCTTCTAGCTTTTCAATACCTAGGATTTCTATTGTAAGGGAGAAGATCTCTGCCACAACTCTGAGAAGATTTCTGAACCCTAATCTTTTTATTATTATCGATTTCAATGCAGTCTTTTTATATTATTGATTTGTTTTCTTCTTTTATTATGTCTGAGTAGATCTCTTAGTTAGGTTAGGGTTTTCAAAGGAATTCATGAG
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
192Start:
7765End:
7956Strand:
->Contig00001_LTR-Gypsy_6
CTCATGAATTCCTTTGAAAACCCTAACCTAACTAAGAGATCTACTCAGACATAATAAAAGAAGAAAACAAATCAATAATATAAAAAGACTGCATTGAAATCGATAATAATAAAAAGATTAGGGTTCAGAAATCTTCTCAGAGTTGTGGCAGAGATCTTCTCCCTTACAATAGAAATCCTAGGTATTGAAAAG
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
260Start:
9386End:
9645Strand:
+>Contig00001_LTR-Gypsy_7
GGCCAAACGATGACTTTCCAAGAAGGAGAAGCCGCCGAAATAGATCACCCGCATAACGATGTACTCGTCATCAACCTTTCGATCGGAGGCCACGAAATACCGTAAGTCTTAGTCGACACAAGAGGAGAGGTGAACATCATATTCCTTGAAACCCTTCGGGGGATGGACACTGGGACCAGGCATCTCACAACCCATCCAAAACCGATGACTGGTTTCTCCGGAAAGACGACAATGACAATAGGGACGATCCAACTCCCCGT
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
674Start:
10935End:
11608Strand:
+>Contig00001_LTR-Gypsy_8
TTTGTGTGTTTTCATCATGGTTAGTGAGTAGTTATTCTTTAAGCTTTTGGGTTCGGTAGGTTGATGGTGATTAAGGGTTGATTAGGGAAGTTTAGGGCTAAGAATGTTTAGATCTTTTCTTATTTAGTGTCCTTAATGCTTGATTAGTCTGTTTTAAGTTGGTTTAGATCTTAGGGAATTTTCCATCCACAAGGTGGTTGATGAAATTCCCCAAAGAACTAAATATGAGATTTGCATGCTAGCTCATGTGAGTGATTGCTTAGGATGCTTATTGGTAGATAGAACTGCTTTTTAATGCTTGTTGATTGTCTTTTCACAAATGAGAATTTGGTTTGATTAAATAATTAATTATGGGATTAGTGTCATGAGAATGAATTATTTGTTTAGAGTTCTAAACCTTAGGATCATTGATTGTATGAACTTCCCTAGTTGTCTCTTAATCACTTGAGATCATTAACCTTGACCCAAGGGCTTAGCTTTCTTTATTTGAATCAATTTCTCTGCTTTTATGTGCATTGCTCTGTTTTTACAATCTTCTTTGATCTTGTTTCCTCCTTTTCACTTGTTTGTTTGATCTTGTTAGCATTAGAATCATATCAAAACCCCTGATTGCATTTAGATTAAGCAATTGTCTAAATCTCTAGTGAGTTGGTTTGTTCCCAAATGGATTGATA
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
3953Start:
26481End:
30433Strand:
+>Contig00001_LTR-Gypsy_9
CCGCATAACGATCTGCTCGTGATCAGTCTTTCAATTGGAGGATACGAGATACCGAGAGTCTTAGTAGACACTGGAGGAACGGTGAACGTCATATTCCTGGAAACCCTTCGGAAGATGAACATTGAGACCCGCATCTCATAACCCATCCGAAACCGTTGACTGGTTTCTCTCGGAAAAACGACAATGACAATAGGGACGATCCAACTCCCCGTAAAGGCGAAAGGAGTGGAGAAAGACACGAAGTTCTCGGTGACCGATTGCCCGCGAATCTGCGACGCAATCGTAGGAACACCGTGGCTAAACTCAATGAAGGCGATCCCGTCAACTTACCACCTATGCCTGAAATTCCCAACTCCAACCGGAGTGGAAACAATCTGGGGACGGCAGAAAGACTCTCGAGCTTGTTTCCTAACCGAACACAGATTGAGGAAACCAGTAACCGACCTCAGCCGTCAGCCGCAGTCCGAAAGAGGAAAAGAAGAGCGGCAGCTGGCGAAACTCGAGCAAAAGTTACAGATCGAAGAATCCCGGGAAACGGAGAAGGATCCCCCGTGTGAGCCAGTGATTTCGGTCAACATAGACGAAAAGAATCCCGAGCGATGTACAGAGATCGGAGCAAATTTGGAGGAGCCGATCAAGACTGAGTTAATCACCTTGTTAAAGGAGAACGCCGGATCGTTCGCATGGGCAGCAGAAGATATGCCTGGGATCGACATCGGCATCACAAGCCACGAACTCAACGTAGACCCGACGTTCAAACCGGTGAAGCAGAAAAGGCGGAAACTCGGTCCAGAACGCGCCCAGACGGTGAACGATGAAGTAGAAAGATTGCTCAAAGTCGGGTCAATCACGGAAGTGAAATATCCCGACTGGTTAGCAAATCCGGTGGTGGTAAAGAAGAAGAATGGAAAATGGCGAGTTTGCGTCGATTTCACGGACCTGAATAAAGCGTGCCCAAAAGACAGCTTCCCCCTTCCTCACATCGATCGATTAGTCGAAGCGACGGCAGGGAACAAGCTGCTATCATTCATGGACGCTTTCTCCGGATACAACCAAATCATGATGAACCCCGACGATCGAGACAAGACTGCGTTCACCACAGATCGCGGAATATACTGTTATAAGGTGATGCCATTCGGGTTAAAGAATGCCAGCGCTACATACCAAAGGCTCGTCAACAAAATGTTCGCCGAACAACTCGGAAGAACGATGGAAGTCTACATCGACGATATGTTGGTCAAGTCGTTGGAGGAGAAAGACCACGTCAAACACTTGCGGGAATGCTTTGAACAACTCAACGGCACAACATGAATTAAACCCGGCAAGTGCAGATTCGGAGTAGCATCCGGTGAATTCCTCGGGTATCTGGTAACTCATCGAGGGATAGAAGCAAACCCGAAGCAAATTAACGCTTTGATAGAGATGGCCTCACCAAAACCCAGAGAGAAATCCAAAGATTGACCGGACGGGTCGCGACGCTAAATCGGTTCATCTCGAGGTCAACGGACAAATGTTTGCCTTTCTACGACACACTCAGGGGAAACAAAAAGTTTGAGTGGACAGAGAAGTGTGAACAGGCGTTCCAAGAACTAAAGAAATACCTAGCAAGCCCGCCCGTACTTTCGAAGCCGGTCGAAGGAGAGCCCCTTTTTCTGTATACAGCGGTATCATCGACGGCGGTAGCGGGGTGCTGGTCAGAGAAGATCACAACGAGCAAAAACCGGTCTTCTATGTGAGCCAGACCCTGCGGACGCAGACAGAACCCGATACCCGCTGATGGAGAAGGCGGCCTTGGCAGTGGTGATGTGCGCACGGAAATTACGGCCTTATTTCCAGTCGCACACGATCATTTTACTCACGGTTTTTCCTCTCAGAATGACCTGCACAGTCCCAGTCATCGGGACGTCTGGCAAAATGGGCGGTAGAATTAAGCGAGTACGATATCGAGTACCGGAGTAGAACATGCGCCAAATCACAGGTCTTGCAGATTTTTTGATTGAGCTCCCGACCACAGGCGTTAGTGAGCCGACGTCAAACTCGACGTGGGTTCTCCACGCAGACGGGTCTTCGTCAAAGCAAGGTTCGGGAGTCGGGGTGCGGTTAACGTCACCACTGGGGAAATCTTAGAACAGTCGTTCAGGTTGCTCTTCAACGCTTCCACAACGAAGCGGAGTACGAAGCCTTGATCGCTGGACTGAAACTCGCCCTCGGACTCAAAATCCAAAATCTGCAAGCATTTTGCGATTCTCAGCTGGTGGCAAATCAATTCAGCGGAGACTATGAAGCAAAAGACGACCGGATGGAAGCATACTCTCAAAATTGTTCGGGAGCTCGCAAAACAATTCAAAAATTCGAACTCACAAGAATCCCGCGAGGAGAAAACGCCCCGGCCGATGCATTGGCGGCCCTAGCATCAACGTCTGCCCCGGGAGAAAGTCGAATCATTCCCGTCGAATTCATAGAACAACCAAGCATCGATCCACCACAAGTCATCAACCTTATACAACTCCCGGAAGGAGAAGACTTAGAAGAGCCTCCGGAAGAAGAGTTAACAACTGGTCCAAAAGAATATGGCTGCGATCGCGGGTGGATGGCTCCGATACGAACATACATCATGGACGGGGAAGTCCCGGCGGACAAATGGGCTGCACGAAAACTAAAGGCCCAAGCGGCCCCGCTTCGTTCTCCTCGACGGCAACATCTACAAATGGAGGATCTCCGGACCATTAATGGCTGCGTGGAAAAAGGAGGCAAGACGAATTATGTAAGAAGTCCATAGTGGATCGTGCGGAAATCACTCCGGAGGAAGAGCTCTCGCATCAAAATCAAGCGGCATGGACACTATTGGCCAACCATGATAAAAGATTGCGAGAAGTTCTCCCTCAAGTGCGAGAAATGCCAGAGGCACGCACCAGTGATCCATCAGCCTGCAGAACTGCTCTCGTCAATTTCTCTGCGCCGTACCCGTTCATGAGTGGTCGATGGATATCGTGGGGCCAATGCATAACTCAAAGCAGAAAAGGTTCCTACTTGTCCTAACAGATTACTTTCAAAATGGTCGAAGCGGACTCTTACGCCAGTATCAAGGACGCCCATGGAGCATTTCGTCTGAAAAACATCATATGCCGGCACGGAGTCCCTTACGAGATCGTCACGGACAATGGTTCTCAATTCATTTCCACCCGCTTCGAAGGATTTTGCGAAAAGTGGAAGATACGCCTGAGCAAGTCAACCCACGTTATCCGCAGGGTAATGGCCAGGCCGAAGCAGCCAACAAGACTATCGTTGACGGACTCAAAAAGCATCTTGACGAGAAGAAAGGGCGATGGCGGACGAACTCGAAGGGGTGCTCTGGTCCCATCGGACAACTCCAGACGCGCAACCGGAGAAACGCCATTCGCACTGGTCTACGGTGCCGAATGCGTTATACCGTCAGAAGTAGACTTTCCCGGCGTCAGACCAAGGCTCTTGCCCGGACAGGAAGGCTTAATCATCTGATGATGTTAGCCGAACCGGACCTAATAAACGAAAGACGGAATCAAGCCCTCATCCGCATCCAAAACTATCAACAAGCAGCGGCCAAATACTACAACTCAAACGTGCCACACCGCAAATTCAAGGAAGGAGACCTCGTCCTCCGCAAAGTTTTCCAGAACACCGCGGAGCCGAATGCAGGAAATTAGGCGTGAAATGGGAAGGACCGTACAAAGTAGCAAAGGTGGTCCGTCCAGGAGCGTACGAGCTAGAAAACAAAGAAGGGAAGCCAGTCCCAAGGACATGGAACGCAATGCACCTAAAGAAGTATTACCACTAGACGTTGTAAAATAGAACTACGAACGGCTTGATCCCTATATTCAGGGTACGTAGGCAGCTCGCCTTCCGACGAGTTCAGCTATTTATATTTCATAATTTTCAAGGGGGAATGGGTCCGTATATACATACTCCCAAATTTT
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
291Start:
39436End:
39726Strand:
->Contig00001_LTR-Gypsy_10
AGTGATACCGTTTAAGATTGTAAGAATTCGTAGCCCGAGGTACATCCTCACCATCAATGGTTTGTAAGGGTTAGACTCCATGTTTGACCTTCTTCACGATTAAGTATGGCCCTTCCCACTTAGCACCGAGTTTATCAGCTTTAAGCTCCTTGGTGTTTTTGAATACTAATCGTAGAACCAAATCTCCCTCGTCAAGGGGGTGATCCTGAACTCTTTTTGTCGTAGTATCCATATGCGACTTGTTGATAATTCTGAATCTGGAGTAATGCATGATCTCAGAGTTCTTCGATT
Isatis indigotica (v1.0)
ID:
Contig00001_LTR-Gypsy_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
269Start:
39760End:
40028Strand:
->Contig00001_LTR-Gypsy_11
CTCCGCAGGTGACATGGCTTCCACTCCATCAGAGAGTGAAAAGGAGTTAGTCCAGATGCGCTTCAGGTAGTCGTTTAATGAGACTACAATACTCCATCCAATTCATCTGACCAACGTCCCTTTTCCGTCCGAAGTCTCTTTCTTATCCTTGCTACATTTTTTAATTAGTAGCCTCAGCTTGTCCATTCCCTTGAGAATAACTCGGAGTCGATTAATTCAGACAAATCCCTCACTTTTCGCAGAAAGCTTCGAAGTCGCTTGAAATAAAT
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1394Start:
6169End:
7562Strand:
->Contig00002_LTR-Gypsy_12
TCATTTTCTCCCCCTTGAGAAGGTTCTGACCTCAGAACAGTTTCATCTGCATCATAAGGAACTAAATCAGCAACATTAAAAGTTGTAGACACATTGTACTCACCTGGAAGCTCCAGCTTGTAGGCATTGTCATTGATCTTTTCTGAAACTCGGAATGGTCCATCTCCCCTTGGTGCAAGCTTGAATTTCTTTGCGTGGGGAAATGCTCCTGTCTCATGTGTAGCCACACCCAGTCTGTGGCTCAAACGTAATCTCCTTACACCCTTTGTTAGCCTTGGCCTTGTACACCTCAGACTTCTTTTCTAAGCTCTCTTTTACTTGTTGATGAAGTTTCTTCACAAACGTGGCTTTGGTCTCTGCATCTGGACTTAAATAGATAGCTTGCGGTAGTGTAATAAGATCTAAAGGGGTAAGAGGATTGAATCCATACACAACTTCAAAAGGAGAGTGGTTAGTAGCAGAGTGTTTGGCATGGTTATAAGAAAATTCAATGAAAGGCAAACAACTCAACCAATTCTTAAGATTCTTACCAACCGTGGCTCTCAACAAGGTGGAGAGTGTGCGGTTTACTACCTCGGTTTGCCATCTGTTTGAGGATGGCAAGTTGTAGAGAATAAGAGCTCGGTGCCAAGATTCTTCCACAATGTCTTCCAGAAATGGCTTAGGAACTTTGTGTCACGATCAGAGACAATCATTCTTGGCACTCCATGTAAGCGCACAACCTCCTTAAAGAATAGATCAGCCGTTTGTGTCGCATCATTGGTCTTTTCACATGGTATGAAATGTGCCATCTTGGAGAACCTGTCTACTACTACAAAAATGGAATCTTTGTGGTGTATCTTAGGCAAGCCTAGAACAAAGTCAATAGAAATGTCCACCCATGGTGCGTTAGGAATTGGTAAAGGCATGTATAAACCATTATGATGTAACTTGGATTTGGCTTTGAGACATGTAACTCATTTGGCACATAGCTTCTCCACATCTCTTCTCATGTGCGGCCAATAAAAGTGCTCCATCAACACGCTCAAAGTTTTGTCTCTACCAAAGTGCCCCATCAAACCTCCACCGTGAGCCTCTCTTGTGATTAGTTCCCTCATGGAGCCTTGTGAAATGCACAATCGCTTCTCCTTGAACAGGAACCCATCTTATTGGTAGAAAACTCCAAATGCAGCTTTAGTAGTGTCTTTATAAAGCTCTTGCAAGTGTGGATCAGCTTCATATGCCTCCTTAATATGCTCAAATCCCATGATCTTAGCTTCCATGGTGGAGATGAGAATGTGATGCCTTGAAAGAGCATCGGCTACGACATTCTCCTTTCCCTTTTTGTACTTGATCACATATGGGAATGTCTCCACAAACTCCAGCCACCTAGCATGCATCTTCTTAAGTGTAGT
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
110Start:
7670End:
7779Strand:
+>Contig00002_LTR-Gypsy_13
GACAGATGAACTAAATGGGCTTTGACCATTTGTACTCTTTTACCTTATCCTTGGTTTTGTCCCAAAGGGTTTTACGGGAAAGGTTTTAACGAGGCAAATTGGTTCACTTT
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
387Start:
9315End:
9701Strand:
+>Contig00002_LTR-Gypsy_14
TGAGATCTCAATTCCACAAGGCGACCAGTGCGGCTCCCGAGATCGACAGAGGAAACTCAGAAGATTCCCTTCACTTCTAGAATCACAAGCGTGAGACTCCCCGACCCCGGCAAACTCAAGATCCCGTTCTACGACGGAACGACGGATACGAAGGCGCATATGACGGCCTTCCATATCGCAATGAGTCGGACCAAATTCAACCCCGAGGAGAAAGGCGCTGGCTTCTGTCTCTTATTCGTCGAGCACTTAAAAAGAACAGCTTTATCATGGTTCTCACGGTTGGAAAGAGACTCGATCGACAACTTCGAGCAGCTATCCGCGGCCTTCTTAAAGCATTATTCGCTTTTCATAAGCCGCTCAACGTCCGACGCGGATCTCTACTCGTTA
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
510Start:
10402End:
10911Strand:
+>Contig00002_LTR-Gypsy_15
CTTTCACCGAGGAGGATGCCGAAGGACTCGATCAGCCCCACGACGATCCCTTGGTCGTAGAACTATACATTAACGACCACGACGTGTCAAGGGTATTGATCGACACCAGAAGTTCGGTAGATGTCATATTCCGGGAGACACTCCGAAGAATGAACATGGACCTATTAGAAGTGAAGCCAAATCCTAGATCACTCACTGGATTTTCCGGGGAAGTCACTATGACCGATAGGACGATCCAACTCCCGGTCCACGCTGGCGGAATCACGAAGGTCGTAAATTTTGCGGTGGCTAATCATCCCGCAATCTACAACGTTATCATGGAAACCCCGGGGATCAAATCGATGCGAGCAATCCCGTCGACGTACCATCTTTGTCTGAAGTTCCCGACTCCTAGCGGAATCAAGACTATCTGAGGAAACCAAAAAGAAGCCCGGATGTGTTTCCTTGCGGAACATAAACTCCGTAATCCGACCGTCCAGCAAAGAGAAACCCTGAAACGAAAGAAAGAAG
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
144Start:
11039End:
11182Strand:
+>Contig00002_LTR-Gypsy_16
GACTTGATCCCTTCTCACAAAGGATACGTAGGCAGCTCGCTTAAAAAACGAGTTCAGTTACCCCCTCCATAAAAAGGGGGGGGGGGGGGGGGGGGGGGAGGGAGTGAGTCCGTATATACATACTCCCGAAGAAATTCTTGCAAA
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
100Start:
14999End:
15098Strand:
+>Contig00002_LTR-Gypsy_17
GTTTGGCGCCGTCTGTGGGGACGAGAAATATTCTTAACCCTAAGAACGAAAAGGATTCGGAACGAAGACAATGACCAGAAGAACCGACGATATCACCAAC
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
658Start:
15805End:
16462Strand:
+>Contig00002_LTR-Gypsy_18
AGATGAAGGAGGTAAGGTCGCAAGTCCATAAAGCGACAAGTGCGGCCCCGGAGATTGATCGTGTCCTAGAGGAAACGCAAAAGATCCCGTTCACTTCAAGGATCACTAGCGTTAGACTTTCTGACCCGGGAAAAATCCGAATTCCCTTCTACGACGGGACGACTGATCCGAAGGCCCATATGACAGCCTTCAACATCGCTATGGGACGGGCTAGATTCAAACCCGAAGAGAGAGACGCGGGATGCTGCCTCCTCTTCGTGGAACATCTGAAAGGATCAGCCCTGTCATGGTTCTCAAGGCTAGACAGAGATTCAATCGACGGTTTTGAACAACTGTCAGCAGCCTTCCTGAAACACTACTCACTGTTCATAAGACAGTCGACATCCGACGCGGACCTCTACTCACTGTCGCAGGAGCCCGAAGAAATCCTCCGAGATTTCATCGAAAGGTTTAAGGTGATTGTCTCAAAAATTGACGGACTAAGCAACAGCGCCGCGATCAACGCCCTGAAGAAGTCCTTGCTGAAGACTTCGAACTTCCGAAAGGAGATTACCGTGAACCCACCAGTCACCATTCAAGATGCTCTCCACCGTGCTTCCAACTTCGTCATCTACGAGGAAGACATGAGGGTCCCAACCGGAAAGCACCAATCCTCAAA
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
793Start:
16705End:
17497Strand:
+>Contig00002_LTR-Gypsy_19
TCGAAAGGAGGCTCGCGGCAAAGCTGTTAGCCGGGGAGCTCGGAAACGGAGTGACCCTCGAGAGTCTCGGAGCTATCGAAGAAGATGCTGGCGCCCCGAACGGGCGACCTAACCAGGAAGTCCCGAAAGGCCCGACGAGGATACCCCCAAACGAGGAAGGATACCAAACGGAGACGACTCCGCCGCCAACCGAAGAAGGATCCACATGATCATCGGAGGATCTCAGTACTGCCGGGACATAGTGGTCTCGATAAAAGCGTTCCTGAGAAGAGGAGACAAGGAGTCAAAACCGCGGGAACCGATCACCGAAAACGATGATCGTATCGCCTTTTAAGAAAAAGACGCCGAAGGCCTTGACCAACCTCACGACGATCCATTGGTGGTAGAGTTGGATATCAACGACCATGACGTCTCACGAGTCTTGATCGACACCGGAAGTTCGGTGGACGTCATTTTTCGAGAGACACTTCAAAGGATGAAGGTGGATCCGTCAAGATAACGCCCAGTCCGAGATCGCTGACCGGATTCTCTGGCGAAGTCACAATGACGGATGGAACAATCCAGCTCCCGTTCGTGCCGGCGGAATCACGAAAATCGTTAACTTCGCGGTGGCAAACCACCCCGCAATTTATAACGTGATAATGGGGACTCCCTGGATCAATTCAATGCGAGTTATCCCATCGACTTACCATCTCTGCCTGAAGTTCCCGACACCAAACAGAATCAAGACCATTTGGGGAAATCAGAAGGAGGCACGGATCTGTTTTCTGGCAGAGCACAAGCTCCGGAATCC
Isatis indigotica (v1.0)
ID:
Contig00002_LTR-Gypsy_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
172Start:
17702End:
17873Strand:
+>Contig00002_LTR-Gypsy_20
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGAACTACGGGTGACTTGATCCCTTTTCACGAAGGGTACGTAGGCAGCTCGCTTAAAAAACGAGTTCAGTTGCCTCTCTCTTTAAAAAAGGGGGGGAGTGGGTCCGTATATACATACTCCCAAATTTTCGCAAATTTTC