ID Class Order Superfamily Length Start End Strand View
Contig00001_LINE-L1_1 RetrotransposonsLINELINE-L14191595016368-
Contig00001_LINE-L1_2 RetrotransposonsLINELINE-L19241634517268-
Contig00006_LINE-L1_3 RetrotransposonsLINELINE-L13642722627589-
Contig00006_LINE-L1_4 RetrotransposonsLINELINE-L135202823631755-
Contig00006_LINE-L1_5 RetrotransposonsLINELINE-L15813312233702-
Contig00007_LINE-L1_6 RetrotransposonsLINELINE-L1853966339747+
Contig00007_LINE-L1_7 RetrotransposonsLINELINE-L13944005140444+
Contig00008_LINE-L1_8 RetrotransposonsLINELINE-L14241526815691-
Contig00008_LINE-L1_9 RetrotransposonsLINELINE-L115061600217507-
Contig00009_LINE-L1_10 RetrotransposonsLINELINE-L14413898739427-
Contig00010_LINE-L1_11 RetrotransposonsLINELINE-L14413897039410-
Contig00011_LINE-L1_12 RetrotransposonsLINELINE-L129522062123572+
Contig00018_LINE-L1_13 RetrotransposonsLINELINE-L120114061606+
Contig00018_LINE-L1_14 RetrotransposonsLINELINE-L14291385914287+
Contig00018_LINE-L1_15 RetrotransposonsLINELINE-L12491442114669+
Contig00019_LINE-L1_16 RetrotransposonsLINELINE-L110553869239746+
Contig00019_LINE-L1_17 RetrotransposonsLINELINE-L11683994440111+
Contig00019_LINE-L1_18 RetrotransposonsLINELINE-L116254030641930+
Contig00021_LINE-L1_19 RetrotransposonsLINELINE-L1111646756+
Contig00021_LINE-L1_20 RetrotransposonsLINELINE-L110465886691-

< 1 2 3 4 5 > Total 574


Isatis indigotica (v1.0)

ID:

Contig00001_LINE-L1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

419

Start:

15950  

End:

16368

Strand:

-

>Contig00001_LINE-L1_1

TCCTTGAATCTCATTCCCCCATATTGCTTTAGCTGAGTCATATGAGACTACGAGATCCATGGAATTTTTGTCTTCCCCATTGTAGTGTCCCACCAAAATTTTCTCATCAGGCCTGATATTTTAGCAAGAAGCTTTTTAGGGAGCATAAAACAAGACATACAGTAGGTAGAGAGGGCAGTAGCTACAGATTTAAGTAATATTTCTTTTCCGCCTTGACTGAGAAGATTTGAATACCAATTTTCCACTTTTGATTGAACTCGATGCATAATTTAAGAGAAGACATCATGCTTGCTATGACCAATTGTTTCTGGGAGGCCTAAGTATTTACCAAACCCTCCAGTTTTGGTGATTCCTGTTAAATTAACAATTTCCTGTCGGATGGAAAGAGAAGAAGATTTACCAAACAGAAGAGCCGATTT

Isatis indigotica (v1.0)

ID:

Contig00001_LINE-L1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

924

Start:

16345  

End:

17268

Strand:

-

>Contig00001_LINE-L1_2

TTTACCAAACAGAAGAGCCGATTTCTGATAGTTGATATGCTTTCCAGAGGCCTCCGAATAGGTTTATAGCAGCTGTAGCATGCAAGAGCAGTCTGCAGATGTAGCTTTGCAAAAAGGAGAGAATCATCAGGAAATAGTAAGTGAGAGATAGGTGGACCATTATTACTTGCTTTAAAACCATGGATGAGATTTTGATTCATTGCATTAGTAAGAAGAGCTGATAAGCCTTCTGAGCAAAGCAAGTAATTATAAGGTGATAAGGGATCACCTTGGCGGATGCCTCTTTGAGGATGAATTTTTTCTGCTGGGGATCCGTTGATGAGGACAGAGTAAGTTACTGATGAATGCAATTCATTACCTACCTGCACCAAACATTTGCAAATACCATTTTCCTTAATATAGCTTCAACATAATTCCATTCTACTTTGTCAAAAGCTTTAGTGACATCCAACTTCATGGCCATATAAGGGGTCTTGATTTTCTTAGTGCAGAGAGAGTGAATGAGTTCATGTGCTAAGTACATTATCTTTAATTAAGCGACCAGGAATGAAAGCAGATTGAAACTCTGATAATAACTCATGCAACCACGGTTTAAGTCTCGATGCTAATACTTTTGAAACTATCTTATATGCAACGTTGCATAGACTGATAGGGCGGAAGTCTTTTACTTGGACATGGGATTTGATCTTAGGGACTAAGCAGATATTGGTGTGATTAATCTCCGAGTCTAGGGTTCCTGTTTGAAAGAAATGTCGTACAAAATTAATCACACCTGATTTGATGATGTCCCAATGATTTTTATAGAAAGCTGCCGTGAATCCGTCTGGGCCAGGAGCTTTGTCCACATTTATTTGAGACAATGATCTGAGAATCTCCTCTACAGTAATTGGTTCTGTAAGCTTGCACTCATATCTGGAGTTACTC

Isatis indigotica (v1.0)

ID:

Contig00006_LINE-L1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

364

Start:

27226  

End:

27589

Strand:

-

>Contig00006_LINE-L1_3

GAATACTTTCGCGTTGCGCGCCTTCCAGATATACCATATCAACCATGGGAAGGGGAGTAGCGTTTCGGTCCGGGTTCCTTGTTCATTCGCTCGCCAGAACAGATAGCCCATGTTTGTGAATATTGAGCTACTCGGGAATATCCCTGGATGGGATGGAATTGGCGATAGAGTCCAGCATTGCTTCGCAGGAGGGCATTCGAAAATCATTTGATTAATCGATTCTTCCTCTCTGCCACAACGAGGGCAACTTCTATTTGTACCACAGTGACGGTCAACTAGCCGACTTGTCGTTGCTACGCAACCCGACAGAGCTTGCAAGATGAAATGCTTTACTTTCCGAGTAGTTTTCAGTTTTCCAGACCTG

Isatis indigotica (v1.0)

ID:

Contig00006_LINE-L1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

3520

Start:

28236  

End:

31755

Strand:

-

>Contig00006_LINE-L1_4

TGTTCTGTCTTCAAAGATCAGTTTGTTACGGGCATTCTAGATAGCCCAGCAAAACCATGGAAAGATCGGGATGGTCCTGATTCCTGTTGGGGGGAGGCAAATCCAGTGCTCTGAGTCATGGAGCCCTGTCTGAAAGTTAGCAAAAAGCGTTGGGTCTATCGGTAGTTTCGTTGGCGCTTGCTCCCACACTTGCCGTGCAAACGGGCAGAGGTAGAATAAGTGCTCAGTCTTTTCCCGTACCCCACATCTTGAGCAGTGAGTCGCATTTATTATTGTTCTCCGAGCTAGGTTTTCCCCTAATGGTAAGGCTCCTTTCATAATTTTCCATAAGAAAATTTGCAGCTTAGGTGGTATTTTCTTGGTCCAAACCGCTTTGGTCCATGTGTTCGTCGTGGTGTTATTTGCTCCTTGGTGTGTCTGGTCTGAATCTTCCAGCGAGTAGTGATAGCCTGTCTTTGTTGAGTAAACCCCAGATTTTTCTGCCAACCAAACAAATTTGTCTTTTGCATCCAACTTGCTGATTCTCAGAGACAGGATTTGTTGTTCTAGCTCAGGGAAGATCCTCTGAACTTTTGCCTTATTCCAGTTCTTTGAAGCAGGGTCTATGAGATCACTCACAATCATTTAGGCTGATTCTCGTGTAGGTGGGCCTATAGGTGTTATTGGTTTCGCTAATGAGATCCAAGGTGCTCCCCAGATTGGAGTATCTTTGTCGTTTCCTATCACTTTGCTAACTCCCTTACTAAGTAGCTCTTTTCCAGCAATTATACCTCTCCATCCATGTGAAGCCGAGTTTGGGGCTGTGCAGTCCAAGAAACACTTTAACGTATTTTCCCAATAAAACTCGAGCTATCAGGCAAGTAGCTTGAGTGAGTATTCTCCAACTCTGTTTGGCAAGGAGAGCATCATTGAAGTTTTCTATCTCTCTAAAACCTAAACCACCAGCTTTCTTGGATTTGGCTAGATTCGACCAAGCTACCCAACACATTTTCTTCTTTTCAGGGTTGGCATCCCACCAAAATCTTGTGAGGGCTGATTGGATTCTTTTACATAAGCTCTTTGGTATCTTGAAGCAAGTCATGGTGTGTTTTGGCATAGCTGTCAGGACCGATTTAAGCATAATCATCTTTCCTGCTGGGGATAGAAGTTTTGTAGACCAGGAGGCAGCTTTTTGTCTGATGCGATCAACAATGCCCGTAAAGAGGTCTTTTTTCTTCCTCCCCCAATGCTCTGGAAGTCCAAGGTATTTTCCATTTCCTCCCTCCCTTTCAATTCCTAGTAACCGCTTAGCTTGAGTTTTACGAACCTCTACAGTCTGCTTAGAGAAGGTAATGGATGATTTCTGCGTGTTGATCTTCTGTCCGGAGGCTGCCTCATATTTTAGAAGGATATTCTTCAGAGCATGACATCTCTTCTCATCCGATTTGCAGAAGAACATGGTATCATCAGCAAATAAGAGGTGGTTCATAGGTGGGCTGTTTTTTGAAACCTTGATACCTTCCATCTCTCCCGAAGCTTGGGCGCGACTGCAAAGCCCTGAAAGCACTTCACTGCAGAGAATAAAGATATAAGGAGATAGAGGGTCTCCTTGGCGGATGCCGCGTTGAGGAAGAACTTTTCCCATAGCTGTGCCGTTGATAAGATACTCATAAGTAACAGTTGTGATACACTGCATGATCCAGTTCACCATTCTCGGGTGAAAGCCAGTCGTCTCCAGCACTTTCTGGATGAAGCCCCATTCTAGCCTATCATATGCTTTGCTCATATCAGTTTTCACAGCCATTGATACATGTTTTTTTGCTCCCGAGGTCTTGAGGTAGTGTAGGGCTTCATGAGTAATGAGGACATTATCTGAAATTGCTCGCCCTGACACAAAAGCTGACTGAGTCTCAGAGATAATATCTTTCAGCACAGGTTGGATTCTTTTGGTGAGTATCTTTGAGATGATCTTGAAATAGACATTGCAGAGTGCAATTGGTCGATAATCAGCTGTTGTTTTAGCTCCCACAATCTTCGGGATAACTCGCACGTGAGTGTGGTTGAGATTTCTGGGGAGGATACCTGATTCGAAGAAGACCACTATTTCCTTAACTATCTCTGTTTTCAGGTTCAGCCAATTGGTTTGGAAGAAGCAAGCCGAAAATCCATCCGGCCCTGGCGCTTTACCCGGATTAATAGCAAATAGAGCCTGTCTGATCTCGTCCTCAGAGGGCGCTGTGATAAGTGTCATGTTTGTTTCTGCAGTGATTTTATTCTGTAGTGCTTCCTCTACTATATCGCTATCGATCTCGCCTTGGGAAGTGAATAGGTCTTGGTAGAAGTCTGATATGACTCGAGCGATCTGTTCCTCTTCGTAGAAAGCCTCTCCATCTTTGTTTTCGATCACCGTAAGTTTGTTAATTGCTCGCCTGCCTCTCGTAGCTGAGTGGAAATAAGCTGTGTTCCTGTCGCCTAAGGTAAGCCATAGTTGGCGGCTGCGTTTTCTCCAGAAGGACTCTTCATGTTTGTAAGCTTTACATAACTCTGCATTGATACTCTGAATCGTTTGTTCGTCAACTGTCGGGTCCGACATGGCTTTATCAAGTTGTAGTTTCAGTTCATTGATCGCTTTCCGATTATTCATGTGGTTTTCTTTGATCCATTTTGAGAGGGCTTTTCTGCACAGCTCTATCCTCCTCTGCACTGTTTGGCCCACTGCCCCTTTCCAAGTTTTGCCAACCAATTATCTAACTCGTTTGTTTTTGCTCAGATTGCGATCGTAGCGGAACAGTCGTCTGACTTTTCTTCTGCGACTGTCCACCCTTGTAATAAGCGGTCTATGGTCTGAGCCCTCAAATTCAAGATACTCATAGCTGCCTCTGGGGAAGGATTCCACCCACACACTGTTAGATAAAGCTCTGTCCAGCCTACAGTGCACCGTATGCGTATGTCGTTGTCCTCTCCAGGAGTAGCTGTTTCCATCATGTTTAAGATCAAACAAGTCGTTCTCAGATAGAAAAGTGCGGAAATCACAGAATGTGCCTTCAGCTCTCTGGGGACCTCCCACTTTCTCTGTGTTGTCAACAATCTCATTAAGGTCTCCCGTGATCTACCAAGGTGTGTCTCTCATAACGCCAATGGTGGATAGTTGCTGCCATACTGCTCTTCTTTTTGTTCGGTCTGGTTCACCATAGGCGAAGGTCGCAAAGAAAGTCTTGTTGGATAATACAATTTCAGTATCGATGAAGTTTTGGTTCTGAGAAAGCACTGTGAGTTTAATTTCCTTCTTCCAAAACAGCGCTAATCCGCCTCCCCCTGGTGAGTGGGGTTCCACAATAGTGTTATTATCATAGCCCATCCAGCAAAACTTATCCAAAACAAAGGGAGATTGATTCTTAGTTTCCATCAAGAAAAACACATCAGGGAAGTACTTGAGTCTAAGCTCTCTCAGTCTCAGGATTGTTGTGGTACTTCCCAATCCACAACAATTCCAGCTCATTAATGCTAAGGAAGAGGATTTGGGGCGTCTTGAAAATCCCCC

Isatis indigotica (v1.0)

ID:

Contig00006_LINE-L1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

581

Start:

33122  

End:

33702

Strand:

-

>Contig00006_LINE-L1_5

GGGCAATCTCTTTGTTCATGTGTGATTCTGTTGCAGCTCCTACAATGTTTCTCAAGCCTCTCATACTTTTGGGCTATGGTGATTTCCTTCCCTTCGCTGAATTCGAGTGTCATTTCCTTGACAAGTGGGATAAGGCCATTGATTCCCACCCTAACTCTTGGGCCCGTACTGGGAATAGAGTGATCTTCCAGCCTCCCTAGTTGTTCACCGATGTGTTTCACCACATCCTCAATCCAGTAGTGAAGGGGTAATCCCTGAATTTGTACCCAAAAGATGATATCATTCGGGAAGTCTGATGAAATTAGTGGTTCCCATTTCTGGAGGATGACCATCCAGAAGGCAAACTGGTGTGGTTGACTTGCAAGAACTTTCTGCACATCTTCTTCCTTCTCGAAGTTTATCTTGAAGCATCCGTTTCCCAGTTCTTCTCCTTCCATGTATCCTCTGAGGTTCAATCTTCTTGCTAACGTGCTAAGCATATCGCCATAGTTCTGTTTTTTGGGTTCGTGAGTCTTCCCATTAAAGTGCGCCTATTCTCTTGTATCAGGGTGGAGGTATTAACATCCGGGATCCTTATCCTT

Isatis indigotica (v1.0)

ID:

Contig00007_LINE-L1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

85

Start:

39663  

End:

39747

Strand:

+

>Contig00007_LINE-L1_6

TGTTTGAGATGTGGGACAGACGAGGGATCGATTAATCATGTTTTATTTGAGTGTCCACTAGCGGTACAAACGTGGGCATTGTCAC

Isatis indigotica (v1.0)

ID:

Contig00007_LINE-L1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

394

Start:

40051  

End:

40444

Strand:

+

>Contig00007_LINE-L1_7

GTTTCTTATGTGGATGGAGCATGGAAGGACAAGGATATATTCTCCGGGCAAGGATGGGTTTGTACGCATCTCGGACAGCGGACCTCTATGGTGGGAATACGGATGCAGTCTGTCTCCACTCCACGCGGAGTTTGAAGCCCTGATTTGAGCAATGGAATGTATGTCACGAATGGGAAGCCCCGCTCCGGTCTTTCTGTCGGATTGTGCCGATCTATTGAAAATTATCTCCTCGCCGGACGCATGGCCTGCTTTCTTAGTCCATATCGAGGAATTCGATCATTGGAAGGAGCGTCTCAGTACTTTTAGGATCCATCTTATTCCCCGAAAGGACAATGAACAAGCGGATAGACTAGCGAAGAAAGCAATGAGTCATCCTTCAGAATTGGTGCATATC

Isatis indigotica (v1.0)

ID:

Contig00008_LINE-L1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

424

Start:

15268  

End:

15691

Strand:

-

>Contig00008_LINE-L1_8

ATCTGGTTAAAAGTAAGGTTGTTTCTTGATTTCCAAATGCGCCAAGGGAGCCAGTACGGGAGAATACGTTGTTCATCTGACAGAGAAGCATTAGGAGACAATAATCCAGCCATGTTTTCTTCGAGGTCTGTAGATGGTGAAAGCAGAATCGGGTGAGGAAGATTTGCTTCTGCCCAATATCGACGTGAAACTGGGCATTGAAAAAATAAATGATTTATAGTTTCATCTTCCAAACCACAACGAATACAAGTCGGATCCAGATTCAAACCACGTGATCTAATTCGTGTTTTTGTGGCCAAAGCTCGGGATAAAATTCTCCATAGAAAATGTTGAAGCTTCGGAAGTATCGGTAACCGCCAAATACTGTCTTTTAGTGCAAAATCACCATGAGCATGATCTGCTGAATTGACCACTGGATCAAGAG

Isatis indigotica (v1.0)

ID:

Contig00008_LINE-L1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1506

Start:

16002  

End:

17507

Strand:

-

>Contig00008_LINE-L1_9

ACCATGTTTTAACAGATTTATACCATGGAGTAGAGATTGCCAACCATAAGATTGTCGTGTCTGAGCAGAAGCTTGTAGGACATTAGTGTCGCGATAGTATCTTGCTTTAAATAAGCGGGCTAGCAACGAGTTTGGATGTTGTAATAAACGCCATGCCTGTTTAGCTAGAAGAGCATCGTTGAACTTCTCAAGGTCCTTGAAACCCAAACCCCCTGCCTTTTTGTGATGTTGTAATTTACTCCAAGCAACCCAAGGAATACCACGAGAATCTGCATTTTTTTCCCACCAAAATTTCCGTAAAATGGAGGTAATTTCAGCCACTACCTGACCAGGGATCTTAAAACAGGACATAGAGTAAACCGGCATAGCAATGGCAACCGATTTCAGCATCACTTCCTTTCCCGCAGGAGAAAGGAATTTGTTCTTCCAAGATGATGTGCAAGCCTTGACTTTATTAATGATATTCTGAAACATATCTGATTTTTTCCGACCAAATTGTTCTGGCAAACCCAGATATTTACCACCTCCACCTCCACCTTGATTTTTTCCGAGTGTCCTTTTAAGTCGTTGTTGTAGCGGACCGGGAATCCGAGAACCAAAAGTAATTGTAGATTTTGATTGATTGATCTTCTGACCAGAGCAAAACTCATATAAGTCAAAAATAGTCTTGAGATTCCGGCAGTTCCTTTCATTTGCTTGTATGAAGAATAGAGAGTCATCGGCAAAAAATAGATGTGAGATAGCTGGGACACCATTGCCCACCTTAATTCCTTTCAGACGTCCATTTTCAGTGCTTCGATCCATTAAGTTACTCAAAACATCCGCGCACAAGATGAAAAGGTACGGGGATAAAGGATCACCTTGCCTTAAGCCACGCTGTGGGACAATATGGCCATGGGGATGACCATTGATTAGCACCGAGTAAGAAACTGTTGTTACAGTAGACATGATCCAACCAATCCAAATGTCGCATAAGCCAAAAGCTTTAAGAGTCCGTTCCAGAAAGGTCCATTCAACTCGGTCATAAGCTTTGGTGATGTCAGTTTTGACCGCCATATAAGTTTGTGAAACCCGTTTTCTAGATTTAAGAGAGTGCATCAACTCGTTAGCAATTAAGACATTATCTGAGGCCATTCTTCCCGGAATAAAGGCTGCTTGTGACTCGGAGACAATGGAGCTTAGGATGCCTTTTAGACACCGAACAAGCAGCTTGGAGATGATTTTGTAAATCACATTACATAATCCTATAGGACGGAAGTCGGACAAAGTTGCCGGGGTGGTGATCTTCGGAATCATGCATATATTTGTATGATTAATATCCGGAGGCATAGTACCCGATGCGAAGAAACTTCTAACCTCTTGACAGATCCGCGGACCAACAATATCCCAAAAACGATGATAGAAACGGGCTGTAAAACCATCTGGTCCCGGACCCTTATCTGCGCCAATAGATGATACAGCCGCAAAAATTTCAGCATCCGTGAAATCTTTTGTTAACGCAGAATT

Isatis indigotica (v1.0)

ID:

Contig00009_LINE-L1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

441

Start:

38987  

End:

39427

Strand:

-

>Contig00009_LINE-L1_10

GAAAAGGCACAAGAAAAAAACAAGTGACTTCTGCTTTCAAGGTGGTGATTGCATAGCAAACATTTAGGGTCTTGAGCTTCATTCCAAGACTGAGTTCTGTCTCTCGTTGATAAACGGTTTTGTATCCCAAGCCATGCAAGGAAAGCATATTTTGGTGTCGCATAAGAGAACCAAATACACTTTGTCCATTGCTGTGGATCATGGAGCTGTCGGATCTGGTGCCAAGTCTTCTTAGAGTTGAATTTAGCTTTAAAGTCGTTTTCCTTCTGCCTCCATAAAGCCACATCAGTACCCTCTGCAACTCGTAGTACTCGGTATTTTCCAATGGTCTCTTCTATCTCATTTAAGACCACATTTCTATGCCTTCTCCGCCTGTGAGAAAGGAGAACATCCTCAACTGAAGCAGCCGCTGGAATACCCAAAGCAATAAACCCACTCTCC

Isatis indigotica (v1.0)

ID:

Contig00010_LINE-L1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

441

Start:

38970  

End:

39410

Strand:

-

>Contig00010_LINE-L1_11

GAAAAGGCACAAGAAAAAAACAAGTGACTTCTGCTTTCAAGGTGGTGATTGCATAGCAAACATTTAGGGTCTTGAGCTTCATTCCAAGACTGAGTTCTGTCTCTCGTTGATAAACGGTTTTGTATCCCAAGCCATGCAAGGAAAGCATATTTTGGTGTCGCATAAGAGAACCAAATACACTTTGTCCATTGCTGTGGATCATGGAGCTGTCGGATCTGGTGCCAAGTCTTCTTAGAGTTGAATTTAGCTTTAAAGTCGTTTTCCTTCTGCCTCCATAAAGCCACATCAGTACCCTCTGCAACTCGTAGTACTCGGTATTTTCCAATGGTCTCTTCTATCTCATTTAAGACCACATTTCTATGCCTTCTCCGCCTGTGAGAAAGGAGAACATCCTCAACTGAAGCAGCCGCTGGAATACCCAAAGCAATAAACCCACTCTCC

Isatis indigotica (v1.0)

ID:

Contig00011_LINE-L1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

2952

Start:

20621  

End:

23572

Strand:

+

>Contig00011_LINE-L1_12

AAAGAAACCTCTCAATAACAGTTAATGTCGAGCTTCTTCTGGAACGTTCGCGGATTAAACCAAAGCTCTAAACATTCAATCATCCGTGAGTGGATTCAAAGAAGCTCTTTCCAGTTCGGCTGTCTCGTGGAGACAAAAGTTAGGGAAACAAATGTTAAGGAGATTGTTCAGGTAATCTTTCCAAACTGGTCTCTTATGACTAACTATGAATATCATGGACTTGGCCGCATCTGGGTTCTATGGAGAGCTGATGTGCGACTTACTCCGATATTTAAAAGTGCACAGATGATCTCCTGTTCAGTTTACCTTGAGGGAGCTGCTAAGGAATTTATCTGCAGTTTCGTTTATGCTCTAAATACAATGACAGAGCGTCGTGAGGTGTGGGAAGACATTCGCGTGCATTATGATTCTCCATTCGTTAAAAACAAGCCGTGGATGCTTTGCGGCGACTTTAACGCAGTTCTGCAAAGTGAAGAAAACTCACGAAATAATCTGGTACCCGCAAGTCTGCATGGAACAAGGGATTTCCAGGATGTGGTTAGCTACTGCTCACTTCAAGACTTGGGATACCAAGGACCTCTCTACACTTGGTCTAATAAACAAACGGATGGGCTTGTCTGCAAAAAGCTCGACAGAGTGCTGGTGAACGAGCTTTGGATTGATCAGTATCCTACTTCATACGCTATCTTCGAAGCAGGGGGTTGCTCGGACCACCTAAGAGGACGAATAATGCTTGAAAACAAAACTACTTCGAGAAGAAAGCCGTTTAAGTTTGTTAATGCCCTGGTAAAACAGCCACAGTTCTTGCCTCTGGTGGAAAATCAATGGCGGTCAAACACTCCACTATTCATCTCCACCTCGGCATTGTATCGTTTCACAAAAACACTCAAGGCTCTGAAACCGTCTCTTCGTGCTTTGGGGAAAGACAAATTAGCAGACCTCTCAAAACGTACGAAAGAGGCATATGACATCCTTTGTAAGGCCCAGCTTGTCACTTTACAGCACCCAGGTATTGAGAACTCCGCAATCGAACATGAGGCCTCAAATCAGTGGCAGAAACTGTCAAATTTGGAGGAGGCCTTCCTCAAGCAACGAGCTAAAATACACTGGCTCGACGTTGGAGACCAGAATAACAAATATTTCCACAGCAGTATTCAACAGCGACAGGCTCAGAATGCGATCCGTGAGATAAAAACACCAAATGGAGACATTGTTTCAGAAGCTGACGATTTAAAAAGCGAAGCAGAGCGCTTTTTCAAGGAGTTCCTAACGCTAGCACCGGCCGACTACAGGGGAATATCTGTTGAAAACCTACAGGACCTTCTACCTTTCCGTTGTACGGAACAAGACTCTGCTTTCCTTACAAGTGACGTTACGGGTGAGGAGATTCAGAAGACTCTGTTTGCTATGCCCAACGACAAATCTCCAGGGCCTGACGGATTTACAAGTGAGTTCTACAAATCAACTTGGTCAATTATTGGTGCGGATTTTATTGTCGCTATCAAATCTTTCTTCAACTTGGGATTTCTGCCAAAGGGTATAAATTCAACGATTCTTGCTCTGATACCAAAGAAGGAGAATGCTTTGGAGATGAAAGATTATAGACCGATATCTCTCTGTAATGTGCTATACAAGGTAATATCGAAGATAATTGCTAACCGCCTCAAGACCCTGCTCCCACGTATGATCACCCACAACCAATCAGCATTTGTCAAACAGAGACTACTGATGGAGAATGTTCTCCTAGCCACTGAATTGGTTCAAGACTACCATAAAGAAAAGGTTTCTCCCAGATGCGCCATGAAAATAGATATTTCTAAAGCTTTCGACTCAGTTCAATGGAACTTTCTTTTCAATGGCTTCAAAGCGATGGGATTTCCACAACAATTCACACACTGGGTTGAGCTTTGCACCACAACACCATCTTTCTCAGTTCAAGTAAATGGAGAACTTGCAGGCTATTTTCAGAGCCAACGTGGTCTGCGCCAAGGATGTTCACTCTCTCCCTACCTCTTTGTCATGTGCATGAATGTCCTTTCACATCTACTTGACAGAGCAGCTGCGGAAAAGGTCATTGGTTATCACCCGAAATGCAAAAAAATAAAGCTCACGCATCTCTGCTTTGCTGACGACCTCCTTGTGTTTGTGGATGGGCATCGGTCTTCCATTGAAGGAATCTTACGAACTTTTGGTGAATTTTCTGAAATCTCGGGTCTTAAGATCAGTATCGAAAAATCTACCATCTACATGGCTGGAATCAATCCTCAACTGCAGGATGCAATAAGGTCGTTGTCACCGTTTGCAACAGGCCGTTTCCCAGTTCGTTACCTTGGTCTCCCCTTACTCACCAAGAGGATGACTAGGAGTGATTACACAGTTTTGGTGGAAAGAATTAGAGATCAGATGTGCTCATGGAGAAACCGATACCTCTCCTTTGCGGGTCGTCTACAGTTGATTCAGGCAGTCATATCCAGCATTGTAAATTTCTGGATCTCTGCTTACAGGCTACCTAATGGCTGCATTGAGGAGATTGAGAAACTATGCTCGGCTTTCCTATGGTCAGGCCCTGAACTAAACACGAAGAAGGCAAAAATAGCTTGGAGGGATGTCTGTACACCAAAACATGAAGGAGGTTTGGGAATAAAATCGATTAAAGATGCTAACAATGTTGCTTGCTTAAAGTTAATTTGGCGTATCCTCTCAGGTGACTCTTTGTGGGTAAAATGGATAAGGGAGACAAACCTTAAGAATGCTAGTTTCTGGGACGTGACTACAACACATTCTGCATCGTGGATGTGGCGAAAAATTTTAAAGTATAAGGATGTGGCTCGGTCTATGCATCAGAAGGAAATCATCACAGGGGAACAAACCTCGTTCTGGTATGATCACTGGTCGACTCTTGGAAGACTAATTGACATTACAGGACAAAGAGGATTCATAGACTTGGGTATC

Isatis indigotica (v1.0)

ID:

Contig00018_LINE-L1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

201

Start:

1406  

End:

1606

Strand:

+

>Contig00018_LINE-L1_13

AGTTTTTGGTCGGAGAAAAATCAACATCAAGGCTCTTGGATGTGGAAGAAGTTACTCAAGTACAAGGAACTCGCAAAGACTTTTCATAGAAAGGAGGTTGTGAATGGAGAGAACACCCTTTTCTGGTATGACCACTGGTCGGATTTGGGTAGAATAATAGATATAACGGGTAACCAAGGTTTTATTGGTCTGGGAATTCCT

Isatis indigotica (v1.0)

ID:

Contig00018_LINE-L1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

429

Start:

13859  

End:

14287

Strand:

+

>Contig00018_LINE-L1_14

GCCAAAAACAGAGGGGGGATTGGGACTGCAATCGATTTCAGAGACAAACAAGGTTAGCTGTCTCAAGCTTATTTGGCGTATTTTGTCCTCAAACTCTCTGTGGGTTCGTTGGATCAAACGCTATTTAATCAAAAAAGGCTTATTCTGGACAGTGAAGATTAATGCTTCTTTGGGTTCTTGGATGTGGAAAAAGTTATTAAAATACAGAGATACAGCAGAGCTGCTCACGAAAGTGGAAGTACATGATGGAAAAACTACTTCATTCTGGTATGATGTTTGGTCTCCCCTTGGGAAATTGTTTGATTTAACGGGATTAAGGGGTCTTATTGATCTGGGAATCAAAGCTACAGCTACAGTGGCTGAGGTTTTAACTCGTAGACAGAAGCACCACCAGTCGGACTTGCTAAACATGATTGAAGCGGAGATTGA

Isatis indigotica (v1.0)

ID:

Contig00018_LINE-L1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

249

Start:

14421  

End:

14669

Strand:

+

>Contig00018_LINE-L1_15

TGGCACAAGTGTATTTGGTTCTCAGATGCTACACCGAAATTTTCCTTCATATGCTGGCTCGCAGTACTAAATCGTTTGGCAACAGGAAATCGGATTCTTCAATGGAACGCAAATGCAGATGCTAAATGTATCTTGTGTACCGATGCATTAGAAACAAGGGAACATCTTTTCTTCTTATGTGATTATTCGCGTGCAGTGTGGAAGGCTCTAGCCCACCAAATGATGGGTTCACACTATACAACAGATTGG

Isatis indigotica (v1.0)

ID:

Contig00019_LINE-L1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1055

Start:

38692  

End:

39746

Strand:

+

>Contig00019_LINE-L1_16

TCTAGGGCTTCGGCGACTGATGATCAAGATGCAACGATGGCGGATGTTAGAGAGAAGACCAGGCCCCCTGGAGAGCCTCCGGACTCTTCGATATCATGGGCGGCAAGGGTTTCACAGAACGTCGGTGGAGGAAGACTGATCCCGGAAGATGTGATTGGTGAGGAGTTTGTGAAAGAGCGCTTGACTCTGGAGTTTCCGAATGGTGAGGAAGGTGAGCCGGTGATTACGATTGGAGAGGAGGTCCTAGACGCAATGAATGGTCTTTGGAGACAGTGCATGATTGTTAAAGTTTTGGGAAAAAACATTGCAATCTCAACTTTAACTCGCAAATTGAAGGAGATGTGGAAACCACGAGGTGCGATGCATATTATGGATCTGCCTCGCCAATTCTTCATGATCAGGTTCGAGTTGGAAGAGGAATACTTGACAGCACTTACAGGGGGTCCTTGGAGGGCTTTCAGCAGCCATCTTATGGTCCAAGCATGGTCTCCGGCTTTTGATCCTCTCAGGGATGAGATATCAACAACGCCAGTTTGGGTTCGTCTGTCCAACATACCTGTGAATCTGTATCACAGAACGATTCTTATGGGTATAGAAAAGGGGTTGGGGAACCCAATCAGAGTGGATACTACGACTCTCAATTTCGAGCGGGCTCGCTTTGCAAGGGTTTGCGTGGAAATAGATTTGAAGAAACCATTGAAGGGGACAGTCTTGGTTAACGGTGAGAGATACTTCGTAGCCTATGAAGGCCTCACTACTATCTGTTCCAGATGTGGCATTCACGGGCACTTGGTTCACACATGTCCACAAGGGGTCCAAGAATGAACAGTTACCACGGCTCCGAACTCTACTCCAAGCGGAGCGCCACCCAGTCAGGTTACAGTCAACGAAGGTTTTACCCCGGTAAGACAAGTATGGAGGAAAACCGGTGAGACCAGTAACAGGATGGACCGTGGGGCAACTGCCGGAGGGGGGAATTTGGAAAATTCTCGCCGGAGAAATGGAAGGAAAGAAGATACGGGGAATATTGTTACTTCCAACAAATTCGGTAGTCT

Isatis indigotica (v1.0)

ID:

Contig00019_LINE-L1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

168

Start:

39944  

End:

40111

Strand:

+

>Contig00019_LINE-L1_17

CTAAAGGCCCACAAAAGCCCAAACAAAATAAAGTCAACAAACCAACGAGGGGGCTGGTTTTTGGCCCGACGCAGAACGAGATGGAACTCTCGAGTTGTGGCAAGAGACTCCGAGTGGAATCGCAAACATTAGGGAGAGCAGGAGGTTCTTTTGTCAGGGACAATGGAG

Isatis indigotica (v1.0)

ID:

Contig00019_LINE-L1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

1625

Start:

40306  

End:

41930

Strand:

+

>Contig00019_LINE-L1_18

TAACGAGTTTCCCCGGCCGTTCAGTTTTTGTATCAGAGATCAATGATTGATTGCATTATGTGGAACTGCCGGGGGGCAAATAAACCCAAATTTAGACGTTCAATCCGGTATCTGTTGAGGAAATTTAAATCAGATGTTTTAGCTGTCTTCGAAATGCACGCGGAAGGTGACAGGGCGAGTCGTATTTGTCGCGGATTGGGTTTTTCGAACTCTTTTAAGGTGGACGCCGTGGGACAGAGCGGTGGCCTATGGCTTCTCTGGCGAGATGAAGCAGGGGAAGTAGAGATTGTTGAGTCATCAGATCAGTTCATTCATGCTAAATTGATCAAGGATGCAGAGGTTCTGAACATTGTTGTGGTATATGCAGCTCCCACTGCAAGCCGCAGAAGTGGTATTTGGGAAAAACTAAAAGCGGTAGTGCAAAGTGCGGTTGGACCAGTTATCATCGGGGGCGACTTCAATTCCATTGTCAGACTTGACGAAAGAACAGGTGGTAGCGGGTGTCTCTCTCAAGATTCCCTACTGTTTGGATCGTGGATTAATGAGTTAGGCTTGATTGATATGGGTTTTCGTGGGAATCAATATACATGGAAGAGGGGGAAGACCGAAAGCACCTTTGTAGCAAAACGTTTAGATCGGGTTCTGTGTTGCGCGCACTCCCGGCTAAAATGGCAAGACGCAACTGTGACGCACCTTCCTTTCCTTGCCTCAGATCATGCACCTCTCTATATACAGCTCACGCCGGAAATAAAGAGGAATGCAAAAAGAAGACCGTTTAGATTTGAGGCGGCTTGGTTAAGTCATGAGGGGTTTAAGGAGTTGTTAGCTACCTCGTGGGATCAATCTATAAGCACTCGGGAAGCTCTTGAGAAGCTCCAGGCTGTCTTATGGAAGTGGAACAAGGAAATTTTTGGGGTCATTCAGGTGCGTAAGGAAAAACTGACTCGTGATTTAACTGATGTGCAGAGTAGGATTGATCAGAATCAAACCGAGGAGCTCTTGAGAAAAGAAGAGGAACTTCTCCGCGATCTGGATACAGTTCTGGAACAGGAGGAGACATTGTGGTTTCAGAAATCAAGGGAAAAATGGGTTTCTTATGGAGACAAGAACACCAAATTCTTTCATACCACGACTGTTATAAGAAGAAAAAGAAACCGTGTGGACATGTTAAAGGATAACGAGGAAAGGTGGATATCTAACACGGATGAACTAGAAGCTTTAGCAGTTAATTACTTTCAGCGGCTGTACTCGTTAGAAGATGTTGACGAGGAAACTTTTGCCCTACCAAATAGAGGTTTCTTTCGGCTTTCTGCTTTAGATCAGACAGCGTTGGGACGACCATTTTTAGAGGAAGAGATACTGAAAGCAGTAAGAAGCATGGGTGGGTTTAAGGCCCCCGGGCCAGACGGATATCAACCCATATTCTATCAGCGTTGTTGGGAAGAGATAGGCAGCTCTGTACTTCGCTTTGTATTCGATTTTTTTAACACAGGTGTCTTGCCTCAGGGAACTAATGATGTCATGCTTACACTTATACCAAAAGTTGCAAGCCCAGACAGAATAACTCAGTTTCGTCCTATAAGTTTGTGCAATGTGCTTTTTAAAATCATAACGAAGACGATGGT

Isatis indigotica (v1.0)

ID:

Contig00021_LINE-L1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

111

Start:

646  

End:

756

Strand:

+

>Contig00021_LINE-L1_19

TCCTTTCTAAAAGAGATCTTTTAAAACAGGGAATGCACTTTATTATTGGAGATGGATTTATAGTAAATGCATGAACTAATCTGTGGCTACCATTGTACCCACCACAGCCTC

Isatis indigotica (v1.0)

ID:

Contig00021_LINE-L1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

104

Start:

6588  

End:

6691

Strand:

-

>Contig00021_LINE-L1_20

GTCCAGTTATCTAACCAGAACTTTGCCGTCATTCCACTTCCAACCTCACATACAATAAATGGCTTAGCTATAGGTCTGAGTTTGCAGATGCATTTCCAAATCCA