TBGR-Browse-Iin-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
Contig00469_ERROPOS100000_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	98	60734	60831	-
Contig00555_ERROPOS400000+_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	121	10503	10623	+
Contig00555_ERROPOS400000+_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	91	90084	90174	+
Contig00555_ERROPOS400000+_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	149	91808	91956	+
Contig00572_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	91	79469	79559	+
Contig00618_ERROPOS60682+_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	86	53328	53413	-
Contig00623_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	105	90851	90955	+
Contig00671_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	139	48155	48293	+
Contig00701_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	139	61123	61261	+
Contig00710_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	93	41119	41211	-
Contig00813_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	98	3978	4075	-
Contig00813_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	98	45928	46025	-
Contig00840_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	94	23502	23595	+
Contig00937_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	108	27816	27923	+
Contig01046_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	96	37398	37493	+
Contig01064_LINE-L1-Tx1_16	Retrotransposons	LINE	LINE-L1-Tx1	116	25364	25479	-
Lachesis_group0_LINE-L1-Tx1_17	Retrotransposons	LINE	LINE-L1-Tx1	96	2539594	2539689	+
Lachesis_group0_LINE-L1-Tx1_18	Retrotransposons	LINE	LINE-L1-Tx1	96	12721279	12721374	+
Lachesis_group0_LINE-L1-Tx1_19	Retrotransposons	LINE	LINE-L1-Tx1	106	12919413	12919518	+
Lachesis_group0_LINE-L1-Tx1_20	Retrotransposons	LINE	LINE-L1-Tx1	82	13694280	13694361	-

Isatis indigotica (v1.0)

ID:

Contig00469_ERROPOS100000_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

98

Start:

60734

End:

60831

Strand:

-

>Contig00469_ERROPOS100000_LINE-L1-Tx1_1

TCCTTTTGAATATTAGCAATTAGAACCTCTGTACATACAATAAACAAATAAGGAGACAACGGATCTCCTTGCCTCAAGCCCCGATGAGGGAAAATATT

Isatis indigotica (v1.0)

ID:

Contig00555_ERROPOS400000+_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

121

Start:

10503

End:

10623

Strand:

+

>Contig00555_ERROPOS400000+_LINE-L1-Tx1_2

TTTTACCGGTTTTCATATAAGGATTTTATACGGTTGTGGAGTCTTTTATATGTTTTTGACAGGTCAAACAAGAGATTCTGTGCATTTGAGCATTTGGAAGAAACTTGGATAATTTGGAGCA

Isatis indigotica (v1.0)

ID:

Contig00555_ERROPOS400000+_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

91

Start:

90084

End:

90174

Strand:

+

>Contig00555_ERROPOS400000+_LINE-L1-Tx1_3

AGTCACTGAGGAGGAAATTTACAAAGCCTTATGCCAAATGAAAGATGATAAAGCGCCGGGAATGGATGGCTTTACAGCTGGTTTTTACAAG

Isatis indigotica (v1.0)

ID:

Contig00555_ERROPOS400000+_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

149

Start:

91808

End:

91956

Strand:

+

>Contig00555_ERROPOS400000+_LINE-L1-Tx1_4

CAAAATTAAACACTTCTGGTGGAAAATATTCCATGGGGCAGTACCTTTTACAGATGCTTTGATACGAAGAAATCTTAAAATATCTCCTGATTGCATGTTATGTAAGGGGGAAGACAAAGAAACGACCTTGCACCTTCTTTTACACTGTA

Isatis indigotica (v1.0)

ID:

Contig00572_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

91

Start:

79469

End:

79559

Strand:

+

>Contig00572_LINE-L1-Tx1_5

AGAAGAGTTATTCAAGGCACTTCAGCAGATGAACCAGGACAAAGCTCCGGGACCAGATGGGCTAAATGCTGGCTTTTACAAAGATCACTAG

Isatis indigotica (v1.0)

ID:

Contig00618_ERROPOS60682+_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

53328

End:

53413

Strand:

-

>Contig00618_ERROPOS60682+_LINE-L1-Tx1_6

AGAGAGAGATAGAGAGAGAGAAAGAGAGAGAGATAGAAAGATGAGAGAGATTTTCAGATACAAAATCACTTTTTACCACAAAAATT

Isatis indigotica (v1.0)

ID:

Contig00623_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

105

Start:

90851

End:

90955

Strand:

+

>Contig00623_LINE-L1-Tx1_7

ACCCGAGAGGAAATTCGTAACACCTTATTCTCTATGTCAAATGATAAATCGCCTGGCCCAGATGGGTTTACTGTGGAGTTTTATAAGGCTGCATGGGAAATCATT

Isatis indigotica (v1.0)

ID:

Contig00671_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

139

Start:

48155

End:

48293

Strand:

+

>Contig00671_LINE-L1-Tx1_8

AGGCCGATTAGCCTGTGTAACGTCAGCTATAAGATAATTTCCAAACTCTTATGCCAAAGGCTAAAGGTGTTCTTACCAAGCATCATTTCGGAAACCCAGTCGACCTTTGTCGCTGGAAGACAGATCACCGATAACATTT

Isatis indigotica (v1.0)

ID:

Contig00701_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

139

Start:

61123

End:

61261

Strand:

+

>Contig00701_LINE-L1-Tx1_9

GTAATTCTATCTTTTCATCTTCTCATCTCTTCACAAATTTCTGAAAACACATTCTTTCCTTTCTATCTTTTGTAAAGGAAACCGAGCCTACCTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAAAAAAAAAAA

Isatis indigotica (v1.0)

ID:

Contig00710_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

41119

End:

41211

Strand:

-

>Contig00710_LINE-L1-Tx1_10

ATAGAATTTTGCCGAGAAACCATCAGGACCGGGAGTCTTTGATGGTCCAATAGAAAATAAGCAAATTCTAACTTCCTCTAATGTTGCAGGGCG

Isatis indigotica (v1.0)

ID:

Contig00813_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

98

Start:

3978

End:

4075

Strand:

-

>Contig00813_LINE-L1-Tx1_11

TCCTTTTGAATATTAGCAATTAGAACCTCTGTACATACAATAAACAAATAAGGAGACAACGGATCTCCTTGCCTCAAGCCCCGATGAGGGAAAATATT

Isatis indigotica (v1.0)

ID:

Contig00813_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

98

Start:

45928

End:

46025

Strand:

-

>Contig00813_LINE-L1-Tx1_12

TCCTTTTGAATATTAGCAATTAGAACCTCTGTACATACAATAAACAAATAAGGAGACAACGGATCTCCTTGCCTCAAGCCCCGATGAGGGAAAATATT

Isatis indigotica (v1.0)

ID:

Contig00840_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

94

Start:

23502

End:

23595

Strand:

+

>Contig00840_LINE-L1-Tx1_13

GCTATGCCAAATGACAAGTCACCAGGACCAGATGGTTTCACGACTGAGTTTTATAAATCTGCTTGGCCGGTTTTGGGAAAAGATTTCATAGCTG

Isatis indigotica (v1.0)

ID:

Contig00937_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

108

Start:

27816

End:

27923

Strand:

+

>Contig00937_LINE-L1-Tx1_14

CACTTATTCCAAAGAAAGAGAATGCATCACATATGAAAGATTACCGCCCTATATCCTGCTGTAACGTCCTCTACAAAGTGATATCGAAGATATTAGCTAACAGGCTGA

Isatis indigotica (v1.0)

ID:

Contig01046_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

96

Start:

37398

End:

37493

Strand:

+

>Contig01046_LINE-L1-Tx1_15

GCTATGCCAAATGACAAGTCACCAGGACCAGATGGTTTCACGACTGAGTTTTATAAATCTGCTTGGCCGGTTTTGGGAAAAGATTTCATAGCTGCT

Isatis indigotica (v1.0)

ID:

Contig01064_LINE-L1-Tx1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

116

Start:

25364

End:

25479

Strand:

-

>Contig01064_LINE-L1-Tx1_16

GATTTTAATCTGTCCGCAAGAACTTTTGAAATGAGTTTATAGGCTACATTGGACAGACTAATAGGTCTATAATCCTTGACTCCTTCAGGATTCTCTACTTTCGGGATAAGGCAGAT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_LINE-L1-Tx1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

96

Start:

2539594

End:

2539689

Strand:

+

>Lachesis_group0_LINE-L1-Tx1_17

GCTATGCCAAATGACAAGTCACCAGGACCAGATGGTTTCACGACTGAGTTTTATAAATCTGCTTGGCCGGTTTTGGGAAAAGATTTCATAGCTGCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_LINE-L1-Tx1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

96

Start:

12721279

End:

12721374

Strand:

+

>Lachesis_group0_LINE-L1-Tx1_18

GCTATGCCAAATGACAAGTCACCAGGACCAGATGGTTTCACGACTGAGTTTTATAAATCTGCTTGGCCGGTTTTGGGAAAAGATTTCATAGCTGCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_LINE-L1-Tx1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

106

Start:

12919413

End:

12919518

Strand:

+

>Lachesis_group0_LINE-L1-Tx1_19

CACTTATTCCAAAGAAAGAGAATGCATCACATATGAAAGATTACCGCCCTATATCCTGCTGTAACGTCCTCTACAAAGTGATATCGAAGATATTAGCTAACAGGCT

Isatis indigotica (v1.0)

ID:

Lachesis_group0_LINE-L1-Tx1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

13694280

End:

13694361

Strand:

-

>Lachesis_group0_LINE-L1-Tx1_20

GACTGCTTTTGAGAAATCGTGACCCAATATAGTCCAAGTAGCTTGATAAAATTCCGCGGTAAATCCATCCGACCCTGGTGTT