ID:

scaffold_1_LTR-Cassandra_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

4284802  

End:

4285127

Strand:

-

>scaffold_1_LTR-Cassandra_1

CCCGTTGGCCCAACGCCCTCTCTAGGCCCGTTGGCCCATCACTGTCCGACGGTCGGGAGTTGTTAGTCCGGAAGACTCGTAAGACTTGTCTACTGTCCCTGCAATCACCACATGATCTTTCCCCGTGCTTTGTCCTCACTCGCACGGTACCGCATAGTACTTCCCGGTAGGTCACCCATCTTGAGACTACTCCAGCATCAGCACGCTTAACTTTGGAGTTCTCTCAGCACATTTGACCGGAAAAGATAAGTACACTTTGTTGACATATAGGTAGCCAAATCAATTCTTATAAGCTTTTTCGACTATCCGGAAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

324

Start:

4285405  

End:

4285728

Strand:

-

>scaffold_1_LTR-Cassandra_2

CCCGTTGGCCCAATGCCCTCTCTAGGCCCGTTGGCCTACCACTGTCCAACGGTCGGGAGTCGTTAGTCCGGAAAGCTCGTAAGAATTGTCTACTGTCCTTGCAATCACCACATGATCTTTCCCTGTGCTTTGTCCTCACTCGCACGGTACCGCAGAGTATTTCCCGGTAGGTTACCCATTCTGAAACTACTCCAGTATCAGCACACTTAACTTTGGAGTTCTCTCAACACACTTGACCAGAAAAAATAAGTGCACTTTGTTGACATAGGTAGCCAAATCAATTTTTATAAGCCTTTCCGACTACCCGGAAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

259

Start:

9842259  

End:

9842517

Strand:

+

>scaffold_1_LTR-Cassandra_3

ATATTGTGGTGCATGTAGATAGGCTTATATAGTTTGATTTGGCTACTATATCACCAAAATGTATTATCTTTTAAAAAACTTCATAATTAAGTGTTTTGATTTTAATCAATTTAAAAGATGAATGAATTCCAAACAAGAAGTGATTTCTGGTATCGTGTTAATCATGAGATCAAAGCATGAAAAATATTACATAATAATTTCCAGGGATAGTAAACAAAAATTTTGAGCTTCCCAAAATGGCTCACGGCCAACGATTGGA

ID:

scaffold_1_LTR-Cassandra_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

10056462  

End:

10056784

Strand:

-

>scaffold_1_LTR-Cassandra_4

CCCGTTGGCCCAACGTCCTCTCTAGGCCCGTTGGCCCACCACTGTCCGACGGTCGGGAGTCGTTAGTCCGGAAGGCTCGTAAGACTTGTCTACTGTCTCTGCAATCACCACATGATCTTTCTCCGTGCTTTGTCCTCACTTGCACGGTACCGCAGAGTACTTCCCAGTAGGTCACCCATCCTGAGATTACTCAGGCATCAGCACGCTTAACTCTGGAGTTCTCTCAGCACACTTGACCGGAAAAGATAAGTGCACTTTGATGACATAGGTAACCAAATCAATTCTTATAAGTCTTTCCATATACCAGAAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

340

Start:

10056989  

End:

10057328

Strand:

-

>scaffold_1_LTR-Cassandra_5

CTCCGTCCTCTCTAGGCCCGTGGGCCCAACGTCCTCTCTCTAGGCCCGTTGGCCCACCACTGTCCGACGGTCGGGAGTCGTTAGTCCGGAAGGCTCGTAAGACTTGTCTACTGTCCCTGCAATCACCACATGATCTTTCCCGTGCTTTGTCCTCACTTGCACGGTACCGCAGAGTACTTCCCGGTAGGTCACCCATCCTGAGATTACTCCAGCATCAGCATGCTTAACTCTGGAGTTCTCTCAGCACACTTGACCGGAAAAGATAAATGCACATTATTGACATAGGTAGCCAAATCAATTCTTATAAGCCTTTTCATATACCGAAAATCGGGATGTTATA

ID:

scaffold_1_LTR-Cassandra_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

12463746  

End:

12464070

Strand:

-

>scaffold_1_LTR-Cassandra_6

CCCGTTGGCTCAACATCCTCTCTAGGCCTATTGACCCACCACTGTCCGACGATCGGGAGTCGTTAGTCCGGAAGGCTCGTAAGACTTATCTAATGTCCCTGCAATCACCATATGATATTTCCTCGTGCTTTGTCCTCACTCGCACGGTCCCACAGAATATTTTCTGGTAGATCACCCATTCTGAGATTACTCAGACATCAACATGTTTAACTTTGGAGTTCTCTCAGCACATTTGACCGGAAAAGATAAGTACACTTTGTTGACATAGGTAGCCAAAACAATTCCTATAAGCATTTCCATATATACCAGGAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

169

Start:

12464353  

End:

12464521

Strand:

-

>scaffold_1_LTR-Cassandra_7

CACGCCTTGGATAGGTCACCCATCCTGAGATTACTCAGTCATCAACATGTTTAACTTTGGAGTTCTCTCAGCCCACTTGACCGGAAAAGATAAGTACACTTTGTTGACATAGGTAGCCAAAACAATTTCTATAAGCATGTCCATATATACCAGAAATCGAGATGTTACA

ID:

scaffold_1_LTR-Cassandra_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

12867173  

End:

12867497

Strand:

-

>scaffold_1_LTR-Cassandra_8

CCCGTTGGCTCAACATCCTCTCTAGGCCTGTTGACCCACCACTGTCCGACGATCGGGAGTCGTTAGTCCGGAAGGCTCGTAAGACTTATCTAATGTCCCTGCAATCACCATATGATATTTCCTCGTGCTTTGTCCTCACTCGCACGGTACCACAGAATATTTTCTGGTAGATCACCCATTCTGAGATTACTCAGACATCAACATGTTTAACTTTGGAGTTCTCTCAGCACATTTGACCGGAAAAGATAAGTACACTTTGTTGATATAGGTAGCCAAAACAATTCCTATAAGCATTTCCATATATACCAGGAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

160

Start:

12867790  

End:

12867949

Strand:

-

>scaffold_1_LTR-Cassandra_9

GGTAGGTCACCCATCCTGAGATTACTCAGTCAAATACATTTTTAACTTTGGAGTTCTCTCAGCACACTTGACCGGAAAAGATAAGTACACTTTGTTGACATAGATAGCCAAAACAATTCCTATAAGCATTTCCATATATACCAGAAATCGAGATGTTACA

ID:

scaffold_1_LTR-Cassandra_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

12948138  

End:

12948462

Strand:

-

>scaffold_1_LTR-Cassandra_10

CCCGTTGGCTCAACATCCTCTCTAGGCCTGTTGACCCACCACTGTCCGACGATCGGGAGTCGTTAGTCCGGAAGGCTTGTAAGACTTATCTAATGTCCCTGCAATCACCATATGATATTTCCTCGTGCTTTGTCCTCACTCGCACGGTACCACAGAATATATTCTAGTAGATCACCCATTCTGAGATTACTCAGACATCAACATGTTTAACTTTGGAGTTCTCTCAGCACATTTGACCGGAAAAGATAAGTACACTTTGTTGACATAGGTAGCCAAAACAGTTCCTATAAGCATTTCCATATATACCAGGAATCGGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

160

Start:

12948755  

End:

12948914

Strand:

-

>scaffold_1_LTR-Cassandra_11

GGTAGGTCACCCATCCTGAAATTACTCAGTCATCAACATGTTTAACTTTGGAGTTTTCTCAGCACACTTGACCGGAAAAGATAAGTACACTTTGTTGACATAGGTAGCCAAAACAATTCCTATAAGCATTTCCATATATACCAGAAATCGAGATGTTATA

ID:

scaffold_1_LTR-Cassandra_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

369

Start:

13753552  

End:

13753920

Strand:

+

>scaffold_1_LTR-Cassandra_12

GTAACATCCCGATTTCTAGTATATGTGGAAAGACTTATAACAATTGATTTAGCTATTTATGTTATTAAAGTGCACTTATATTTTTGGACACTGGTCTTAAGAGAACTCCAGAATTAAGAATGCTTAAGTTGGACCAGTTTCAGGATGTGTGACATACCAGGAAGTGGTCTGTGGTATTGTGTGAATGAGGACAAAACACGAGGAAAGATTTTGGGTGATTGCAGGAATAGTAGACAAATCTTACGGGTTTCCCAGACTAACGCATCGATCATCGGACAGTGGTGGACCAACGGGCCTAGAGAGAGGACGTTGGATCCATGGGCGTAAAGAGAGGGTGTTGGACTCACTGGAAGGGGCGGTTGGGGCGTT

ID:

scaffold_1_LTR-Cassandra_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

302

Start:

13754134  

End:

13754435

Strand:

+

>scaffold_1_LTR-Cassandra_13

TGTAACATCCCAATTTCTAGTATATGCAGAAAGGCTTATAAGAATTGATTTGGCTACCTATGTCTATTTTTTTGGGCACTGAAAGAACTCCAGAGTTAAGAGTGCTTAAGCTAGAGCAGTTTCAGGATGGGTGACCAACTGGAAAGTGATCTGCAGTACCGTGTGAGTGAAGACAAAGCAGGAGAAAAAATTACATGGTGATTGCAGGGACAGTAGAAAAATTTTAAAAACCTTCCGGACTAACGCACTGACCGTCGGATAGTAGTGGACCAATAGACCTATAAAGAGGATGTTGGGCCAAC

ID:

scaffold_1_LTR-Cassandra_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

13791918  

End:

13792237

Strand:

+

>scaffold_1_LTR-Cassandra_14

TGTAACATCCCGATTTCCAGTATATGGAAAGGCTTATAAGAATTGATTTAGCTATCTATGTCAATAAAGTGCATTTATCTTTTCCGGTCAAGTGTGCTGAAAGAACTCCAAAGTTAAGCGTACTAATGCCTGAGTAATCTCAAGATGGGTGACCTACCGGGAAGTACTCTGCGGTACCGTGCGAATGAGGACAAAGCACGGAGAAAGATCATGTGGTGATTGTAGGGACAATAGACAAGTCTTACGAGCCTTCCGGACTAACGAATCCCGACCATCGGACAGTGGTGGGCCAACAAGCCTAGAGAGGGTCTTGGGCCAAC

ID:

scaffold_1_LTR-Cassandra_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

223

Start:

16441688  

End:

16441910

Strand:

+

>scaffold_1_LTR-Cassandra_15

TTGACTTGCATCACTATGTCACCAAAATATACTTAATTTTTTAGTCACTTATCCAGAGAGAATTGCAGAGTTAGCGTGGTTGAGCGATACCAATTTAAGGATGAATGACATATAGGAAAGTAAATTTGGTATCATGTAAGTGAGGACAAAACAGGAAAAAATATCACATGGAGATTGCAGGTTAGCAAACAAGTCTTTTTAGCCTCCTAAGGTAGCACATTGA

ID:

scaffold_1_LTR-Cassandra_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

296

Start:

17911720  

End:

17912015

Strand:

-

>scaffold_1_LTR-Cassandra_16

TATAATGCCCCAACCATCCCTAGTAGTGAGTCTAACCTCTCCTCTCTCGACCCGTAGGTCTACCCCTATCCGACGGCTGGTGTATTGTTTGGGAGTCTCATAAAGCTTATTTATTGACCTTGCAACTATCATGTAATCTTTTTCCGTGATTTGTTTTCACTCACACAGTACCACGAATCACTTTACGGTAGGTCATCCAACATAAGATTAACTCTAAATTTTTCTCAAGACCAATACCTAAAAATATAAATGCACTTTGATAACATAAGTACTTATAAGCCTCTCCGCATATACCA

ID:

scaffold_1_LTR-Cassandra_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

109

Start:

17912028  

End:

17912136

Strand:

-

>scaffold_1_LTR-Cassandra_17

TCACCCCAATTCCTAGAGTGTAACGCCCTTGTTGTGTACTAAGATCGTCACCCTTGACGATATGAGTCCACATGATTCCACACATGTTTTGGGTTCAGCTCTGATACTA

ID:

scaffold_1_LTR-Cassandra_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

348

Start:

17912139  

End:

17912486

Strand:

-

>scaffold_1_LTR-Cassandra_18

TATAACGTATCGACCGCCTCTATCAGTGAGCCAAACGCCCGCTCTCTCAATCCGTGAGCCCCCTGACTGATGGCCGGTGTGTTGTCCGGGAAGCTTATAAGACTTGTTTACTGATCCTGCAATCACCACTTGATCTTTCTCCGTGCTTTGTCTTCATTCACATGGTACTGTTAATCACTTCTCGGTCGGTCATCCATTCTGAGATTTTTCCAGCTCAAACATGTTTAATTTTAGAATTCTCTCAAGATCAGTGCCCGAAAATATATATTCACTTTGGTGACGTAATAACCAAATGAATTCTTATAAGCCTCTCCACACATACCAAAAATCAAAAATCAGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

314

Start:

17952709  

End:

17953022

Strand:

-

>scaffold_1_LTR-Cassandra_19

CCCGTTGGCCCAACGTCCTCTTTTTTAGGACCGTTGGTCTCCACTGTCTGATAGTCGGTGCGTTAGTCCGAGAGGCTCGTAAGACTTGTCTATTGTCCTGTGATCTTTCCCGTACTTTTTTCCTCGCTCACGGGGTACCGCGGACCACTTCCCGGTAGGTCACCCTTCCTAAATTTGTTCGATCTTTAAGCACGCTTTACTCTGAAGTTCTATCAAGATATTTGACCGAAAAAGATATATGCGCTTTGATGACATAGGTAACCAAATCAATTCTTATAAACATTTTCATATATACTAGAAATCAGGATGTTACA

ID:

scaffold_1_LTR-Cassandra_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

215

Start:

18321113  

End:

18321327

Strand:

-

>scaffold_1_LTR-Cassandra_20

CTTTACAAATAATCATAAGAATTTTTTCATGTGTTTTGTTTTACTCACATGGTGGTAAAAGTCATTTTTCAGTACGCCAACCATCCTGAAATTGCAATAGTTTAATCACGCTTCATTGTCGAGTTCTTTCAAGATAAGTTACCAAAAGATAAATTCTGATGATATAGTTATCAAAATCAGTTCTCTTAAACCCTCTTCATATACCACCACATTTC