TBGR-Browse-Csa-LTR.LTR

ID	Class	Order	Superfamily	Length	Start	End	Strand
Chr12_LTR_1	Retrotransposons	LTR	LTR	86	8333491	8333576	-
Chr16_LTR_2	Retrotransposons	LTR	LTR	82	4535237	4535318	+
Chr17_LTR_3	Retrotransposons	LTR	LTR	89	10897450	10897538	-
Chr3_LTR_4	Retrotransposons	LTR	LTR	107	65874	65980	+
Chr1_LTR_5	Retrotransposons	LTR	LTR	714	11115073	11115786	-
Chr1_LTR_6	Retrotransposons	LTR	LTR	1175	11200448	11201622	-
Chr1_LTR_7	Retrotransposons	LTR	LTR	758	11203253	11204010	-
Chr1_LTR_8	Retrotransposons	LTR	LTR	658	16417121	16417778	+
Chr10_LTR_9	Retrotransposons	LTR	LTR	96	11425175	11425270	+
Chr10_LTR_10	Retrotransposons	LTR	LTR	1181	11685368	11686548	-
Chr10_LTR_11	Retrotransposons	LTR	LTR	753	14150337	14151089	+
Chr10_LTR_12	Retrotransposons	LTR	LTR	96	15565036	15565131	-
Chr10_LTR_13	Retrotransposons	LTR	LTR	436	21523982	21524417	+
Chr10_LTR_14	Retrotransposons	LTR	LTR	271	23094944	23095214	-
Chr10_LTR_15	Retrotransposons	LTR	LTR	372	23108354	23108725	-
Chr10_LTR_16	Retrotransposons	LTR	LTR	98	24000646	24000743	+
Chr10_LTR_17	Retrotransposons	LTR	LTR	98	24056616	24056713	-
Chr10_LTR_18	Retrotransposons	LTR	LTR	98	24057386	24057483	-
Chr10_LTR_19	Retrotransposons	LTR	LTR	98	24059347	24059444	-
Chr10_LTR_20	Retrotransposons	LTR	LTR	130	24811393	24811522	-

Camelina sativa (v2.0)

ID:

Chr12_LTR_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

86

Start:

8333491

End:

8333576

Strand:

-

>Chr12_LTR_1

TATGCAAATCGATGCTGAAATGTTGAAACCTGGACTTAAAAGGTTACTTTAGCTGTTGTATATTGATATTAAATATTAACCAATTA

Camelina sativa (v2.0)

ID:

Chr16_LTR_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

82

Start:

4535237

End:

4535318

Strand:

+

>Chr16_LTR_2

GTTAAACTCCACCCTTTCTTAGCAGCTGCACCAAGTAATAGCTTCACACTAGTCAACTTTGCCACAAGAGAAAAAGTTTCAA

Camelina sativa (v2.0)

ID:

Chr17_LTR_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

89

Start:

10897450

End:

10897538

Strand:

-

>Chr17_LTR_3

TGTCATATCTAGTGTGTATATATATATGTATATATATTTTAATGAATTATTTAGGATAAATTTGTTGTAAATCTATAAGAATCACATGT

Camelina sativa (v2.0)

ID:

Chr3_LTR_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

107

Start:

65874

End:

65980

Strand:

+

>Chr3_LTR_4

TTCTCTCATCCTTTACTCTTCTGTATTTATTCTTTACTATATAATAGTATATAAAATGAATGTGTGTTTGGCGTGAGTTTGTGTTTTCTTAATCAGCAAAGTTTAAT

Camelina sativa (v2.0)

ID:

Chr1_LTR_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

714

Start:

11115073

End:

11115786

Strand:

-

>Chr1_LTR_5

AATAATAAAGTGCAGAAAGTAAATAACACAAGAGCTTTGTTAACAAGTTTCAGTTTTTCCTACTCTCCCGGACCACGTCCAGATTTTGATTCTACTAGAACAAGAAAGGAAATACAACCTATTCGCAAACGCGTAACTCACACAACCCTCTTAATTCACCGCTATGTTCTATAACATGAAATCTTAAGGATAAATCTCTACCCTTAGCTAAACTCACACCGAGTCTAGATTCAAACCAAGATAACCTAACCTTGG

Camelina sativa (v2.0)

ID:

Chr1_LTR_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1175

Start:

11200448

End:

11201622

Strand:

-

>Chr1_LTR_6

TGTAAATGCGGATGAGGCAATAATAAAGTGCAGAAAGTAAAGAACACAAGAACTTTGTTAACGAGGTTCGGTTTTTCCTACTCCCTGGGACCACGTCCAGATTTCGATTCCACTAGAACAAGAAAGCAAATACAACCTATTCGCAAACGCGTAAATCAAGCACAACCCTCTTGATTCACCGCTCCGTTCTATAACATGAAATCTTAAGGATAAATCTCTACCCTTAACTAAACTCACACCGAGCCTAGATTCAAA

Camelina sativa (v2.0)

ID:

Chr1_LTR_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

758

Start:

11203253

End:

11204010

Strand:

-

>Chr1_LTR_7

TGTAAATGCGGATGAGGCAATAATAAAGTGCAAAAAGTAAAGAACACAAGAACTTTGTTAACGAGGTTCGGTTTTTCCTACTCCCCGGGACCACGTCCAGATTTCGATTCCACTAGAACAAGAAAGCAAATACAATCTATTCGCAAACGCGGAAATCAAGCACAACCCTCTTGATTCACCGCTCCGTTCTATAACATGAAATCTTAAGGATAAATCTCTACCCTTAACTAAACTCACACCGAGCCTAGATTCAAA

Camelina sativa (v2.0)

ID:

Chr1_LTR_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

658

Start:

16417121

End:

16417778

Strand:

+

>Chr1_LTR_8

AGAATGCACCTAGAAACGTTTTTCGACCTGTTTGTCATCATTGTGGTGTTGTTGGGCATATTAGGCCAAGATGTTTCAGATTGTTGAGAGAGAGGAGTCGAATGGAGAATGCTTATGATGTAAGGTTTCATGGTCCTACATGTTATCATTCTGGAGTTCAAGGACATATTAAGAGGAATTGTTTCAGATTCATTCAAGGAGTCAATCATGGAGGTCTATGGCCCAACAAGATTTGGGTTAGAAAAGATGAGTTAT

Camelina sativa (v2.0)

ID:

Chr10_LTR_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

96

Start:

11425175

End:

11425270

Strand:

+

>Chr10_LTR_9

GCAGCAAACGATCAGCAGCGTGACATGGTGTTTGATCCAAGTGATGTCTTATGCATTTTGTTTACGATGGATCGTTTTTTCCCTCGTGCATTTGAC

Camelina sativa (v2.0)

ID:

Chr10_LTR_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

1181

Start:

11685368

End:

11686548

Strand:

-

>Chr10_LTR_10

TGTAAATGCGGATAAGGCAATAATAAAGTGCAAAAAGTAAAGAACACAAGAACTTTGTTAACGAGGTTCGGTTTTTTCTACTCCCTGGGACCACATCCAGATTTCGATTCCACTAAAACAAGAAAGCAAATACAACCTATCCGCAAATGCGTAAATCAAGCACAACCCTCTTACTTCACCGCTCCGTTCTATAACATGAAATCTTAAGGATAATTCTCTACCCTTAACTAGACTAACACCAAGCCTAGATTTAAA

Camelina sativa (v2.0)

ID:

Chr10_LTR_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

753

Start:

14150337

End:

14151089

Strand:

+

>Chr10_LTR_11

TGAAGATGTATTGGTTTGTCTGAAGTAGTGTATGTGTGATTCAAGAAGTGATACGGGATTGTTGTTGTTTTATGTGTGTGAGAATTTTCTAAAAGGTTTGAGAAGACAATATTGAAGGACGATTTGAGGATGAATTGAAAAGGAAAACTACTATTTCTTTGGTTAATTAAATTAGAATTTTACAAGAAACAAAGAAAATAGCAAAAAGGAAAAAGTCTTTTTCTTATTGAATGTGGAAATCTTCTCCTATGGTGA

Camelina sativa (v2.0)

ID:

Chr10_LTR_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

96

Start:

15565036

End:

15565131

Strand:

-

>Chr10_LTR_12

TGCATAAAGTAAATAAGACACACAAGCTTTGTTAACGAGGTTCGGTTTTTCCTACATCTCCGGGACCTAGTTCAGAACAAATCCACAAGAACAAGA

Camelina sativa (v2.0)

ID:

Chr10_LTR_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

436

Start:

21523982

End:

21524417

Strand:

+

>Chr10_LTR_13

TAATTAGAGGACGCAACAGCATTGTATATTCATTCATAATTTTGCATCAATAAAAGATAAAAAAAGAGGTAGTCTTAACTACCTAAAAAAAGCTTTGTTTGTCAAAGCCCTACAAGGAGGACTTGCAACCTCGTCGATCTCAATCTCACAAACTCGATATCGACTTCATCTCGTTCGTTTTCGCCTCATCTTCTCTCATCACCACCACCGTTCACGTTTGCTCTGTTTTTCTTCATCAAAACAGAGTATCGATCC

Camelina sativa (v2.0)

ID:

Chr10_LTR_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

271

Start:

23094944

End:

23095214

Strand:

-

>Chr10_LTR_14

TGTAAGTGCGAGTGAGGCAAATAAAAGTGCAGAAATAAATGAGACAAGAAGTTTGTTAACGAGGTTTGATTTTTCATACCCCCTCCCCTACCTCTGAGAATAAATTCAGATTTCGATTTCACTAGAAATAGATAGCATAAACAACTAATTTGCAAATGCGTAAATCAAGCACACCATTTTTGAACTGCCACTCTTTTTCTATAATCTGAAATCTTTAGGATAAACTAATCCTAAGCTAAACTCCCCATGAATCTA

Camelina sativa (v2.0)

ID:

Chr10_LTR_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

372

Start:

23108354

End:

23108725

Strand:

-

>Chr10_LTR_15

AAGCATTAAACCACGATACTTTGTTACACAAACTCTCCAAAAGCTCTTTAAGATTGTTCTTTGTACCTTAGCTTTATTACCTCTACACCTCCTTATATAATCATTATTTTCTTCCTAATCACATAAGAGAAAATTCCCATATTCCATAAAGAAAAGTTTGTTTTTCTCCTTTTTACTGTTTTTTTTTTCCTTTTCAAACTCCAATTTTATAAAATATAAAATAGTCCTTTTCCATTTGTTTCATCCTCTAAACCA

Camelina sativa (v2.0)

ID:

Chr10_LTR_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

98

Start:

24000646

End:

24000743

Strand:

+

>Chr10_LTR_16

GTTGTAATTGCTATCTTGTTCTAGTGAATTTGTTCAGGACTAGGTTCGGGGATGTAGGAAAAACCGAACCCCGTTAACAAAGCTTGTTTATTATTTAC

Camelina sativa (v2.0)

ID:

Chr10_LTR_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

98

Start:

24056616

End:

24056713

Strand:

-

>Chr10_LTR_17

GTAAATAATAAACAAGCTTTGTTAACGGGGTTCGGTTTTTCCTACATCCCCGAACCTAGTCCTGAACAAATTCACTAGAACAAGATAGCAATTACAAC

Camelina sativa (v2.0)

ID:

Chr10_LTR_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

98

Start:

24057386

End:

24057483

Strand:

-

>Chr10_LTR_18

GTAAATAATAAACAAGCTTTGTTAACGGGGTTCGGTTTTTCCTACATCCCCGAACCTAGTCCTGAACAAATTCACTAGAACAAGATAGCAATTACAAC

Camelina sativa (v2.0)

ID:

Chr10_LTR_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

98

Start:

24059347

End:

24059444

Strand:

-

>Chr10_LTR_19

GTAAATAAGACACAAGCTTTGTTAACGGGGTTCGGTTTTTCCTACATCCCCGAACCTAGTCCTGAACAAATTCACTAGAACAAGATAGCAATTACAAC

Camelina sativa (v2.0)

ID:

Chr10_LTR_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR

Length:

130

Start:

24811393

End:

24811522

Strand:

-

>Chr10_LTR_20

TTCTGGTTTGGGAGGCATGATTGGGATAATAATTCAACGCCAGGAACGACGAGAATCTGATACCAACTGATAAGGGGGCGGAAGCTAGAAGAGATGGTGGTACTCTGTTTTGAAGGTGACAAAACAGAGT