ID Class Order Superfamily Length Start End Strand View
scaffold_1_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA16265370356537196+
scaffold_1_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA10468066986806801-
scaffold_1_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA9780260348026130+
scaffold_1_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA9786575688657664+
scaffold_1_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA2541085675410857007+
scaffold_1_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA1581129738211297539-
scaffold_1_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA1631166688311667045-
scaffold_1_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA1041168251411682617+
scaffold_1_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA1071168447111684577+
scaffold_1_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA1611186227111862431-
scaffold_1_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA961190738811907483-
scaffold_1_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA1211200307412003194+
scaffold_1_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA2001207739512077594+
scaffold_1_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA1001207767412077773+
scaffold_1_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA1101220009112200200-
scaffold_1_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA1621220330112203462-
scaffold_1_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA1641225561712255780-
scaffold_1_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA1551226755012267704+
scaffold_1_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA2261227848912278714+
scaffold_1_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA1631227869612278858+

< 1 2 3 4 5 > Total 35


Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

6537035  

End:

6537196

Strand:

+

>scaffold_1_SINE-tRNA_1

ACCAAATGTTAATAGCTTAATTGGTAAAGATCTCTTGGAAAAGCTTAGAGGTCGCCGGTTCGAATAGCGATTGGGACGAAATTATATAACCTGCTTTGGTTTCGGGTCTGGGGATGTATAGGTTTTGGCCCAGAACCTCTTTGAAAAAAAAAAGAGAAAAGA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

104

Start:

6806698  

End:

6806801

Strand:

-

>scaffold_1_SINE-tRNA_2

TTTTTTTTGAATAATCAAAAAGGTTCTAGGCCGAATCCCATATATCCCGGAGACCAAAACATGTTATATAGTCTTGTCCCAAATACTACTCGAATCGGCGACCT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

97

Start:

8026034  

End:

8026130

Strand:

+

>scaffold_1_SINE-tRNA_3

AACCGGCGCCTCTAGCTCTGGTGGTAAAAAACCATCAGCTGAGGTACCAGCCATCACGAGTTCGAGCCCCGGCCACTGCGTATATCACATATGGGCT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

97

Start:

8657568  

End:

8657664

Strand:

+

>scaffold_1_SINE-tRNA_4

AAGGTTAGAGGTCGTCAGTACGAATAACATTTGAACGAAACTATATAACTTTGGAGGCCTGAAGGGATGTATATATTTCGCCCCATAACTTTTTACT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

254

Start:

10856754  

End:

10857007

Strand:

+

>scaffold_1_SINE-tRNA_5

GTCGAAGCTCCTTTAGTCTAGTGGTTGACGAATGGTTGTTTAAAGCTTCTACACCAAGCGGTCTGGGGTTCGACGTACAGGTAATGCGATTTATTTAATTTACAGATGAAGGAAATAAGCTTCAAGGAGGTCTATAACAATGCACAATTAGAGGGTGTAATCTGTGGTGAATCTAAAAGGGTCGGACAGAATTGTCGGTAGTACAATCGTAATTGTAACAATTCTCATAATTTGTAATAAATAATAAATCAAGA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

11297382  

End:

11297539

Strand:

-

>scaffold_1_SINE-tRNA_6

TTTTTTTTTGAATAATTAAAGAGGTTCTGGCCGAAGCCCATACATCCTTTGAGGTCCGAGACCAAAGTGTGTTATATAGTTTAGTCATGAGCGCTACTCGAACCGCAACTTCTAAGTTTTGCTAGAGATCTTGACCAATTGAGTTATTAGCACTTGGT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

11666883  

End:

11667045

Strand:

-

>scaffold_1_SINE-tRNA_7

TTTTTTTTTTTTAATAATCAAAGAGGTTCTGGGCCGAAGCCCATAAATCCCCTCAGGCTCGAAACCAAAGCATGTTATATGGTTTCATCCCAAGCGCTATTCGAACCGGCGACCTCTAAGCGTTTGCCGGAGATCTTTACCAATTGAGCTATTAGCACTTGAT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

104

Start:

11682514  

End:

11682617

Strand:

+

>scaffold_1_SINE-tRNA_8

CGTTTGGAACGAAACCTTATAACATGTTTTGGTTTCGGGGCTGAGGGGATGTATGGACTTCGGCCCACAAACTCTTTGATTATTCAAAAAAAAAAATGACAAAA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

107

Start:

11684471  

End:

11684577

Strand:

+

>scaffold_1_SINE-tRNA_9

TAACGTTTGGAACGAAACCATATAACACGTTTTGGTTTCGGGGCTGAGGGGATGTATGGACTTCGGCCCACAAACTCTTTGATTATTCAAAAAAAAAAATGACAAAA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

11862271  

End:

11862431

Strand:

-

>scaffold_1_SINE-tRNA_10

TTTTTTTTTTGAATAATCAAAGAGGTTCTATGCCGAAGCCCATACATCCCATAGGCCCGAAATCAAAGCATGTTATATGGTCTCGTCCCAAGCGCTACTCGAACCGGCGACCTCTAAACTTTTGCTAGAGATCTTTACCAATTGAGATATTAGCATTTGGT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

96

Start:

11907388  

End:

11907483

Strand:

-

>scaffold_1_SINE-tRNA_11

TTTTTGAATAATCAAAGAGATTCTAGGCCAAAGTCCATACATCCCCTCAGGTCCGAAACCAGAGCATGTTATATGGTTTCGTCCCAATCGCTACTC

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

121

Start:

12003074  

End:

12003194

Strand:

+

>scaffold_1_SINE-tRNA_12

CAAGTGATAGTAGTTCGATTGGTAAACATCTCTGGCAAAATCTTAGAGATCGCCGATTCGAATAGCGATTAGGACGAGACCATATAACATGCTCTTGGGACTAAGAGAATGTATGAGATTC

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

200

Start:

12077395  

End:

12077594

Strand:

+

>scaffold_1_SINE-tRNA_13

GCGGAAGCCCCTTATCCTAGTCGTGTTGATTAAAGGTATGGTAATGCTTCTACACCAAGAGATCCAAGGTTGGAGTCCCAATACTGCGATTTATTAACAATTATACAGATTAAAAGATGCAAGTTCATAGGAAATCTACGTGATGCGCAATTAGAGCCGTTCGCCGGGATTCTAGCTATTGAAAGAGAAGAATGTGTCCA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

100

Start:

12077674  

End:

12077773

Strand:

+

>scaffold_1_SINE-tRNA_14

GTGTAATCAATAGTGGATCTAGTTGGGTCGAACAGGATTGTCCATGATATAACTATCTATGTAAAAGTTCACATAATATGCAGTAATTAATAAATCTAAA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

110

Start:

12200091  

End:

12200200

Strand:

-

>scaffold_1_SINE-tRNA_15

GACCGAAACCCATACATCTCTTCAGGCCCGAAACCAAAACATATTATATGGTCTTATCGCAAGCGCTAATCGAACCGGTGACCTCTAAGATTTTGCCAGAGATCTTTACC

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

12203301  

End:

12203462

Strand:

-

>scaffold_1_SINE-tRNA_16

TTTTTCTTTTGAATAAACAAAAAGGTTTCAGATCAAAATCCGTACATCCCTTTATACCCGAGACCAGAGCATATTATTTGGTCTCGACCCTATCGCTAATAGAACCGGCGAGCTCTAATTTTTTGCCATAAATTTTTACCAGTTGAGCTATTAGCATTTGGT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

12255617  

End:

12255780

Strand:

-

>scaffold_1_SINE-tRNA_17

TTTTTTTTTTTTTTTATAACTCAGGAGTGATCCCAGAGGCTTTCTAGGCCTAAAGACTAATCTCTTGGGGCCGAGGAAAACCATGTTAAATCTCGAATCCCCGTGGCCAATGCTACTCGAACCCAGGTGACGGGACTTACCTCCCTTTACCACTGGACCAAGGC

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

155

Start:

12267550  

End:

12267704

Strand:

+

>scaffold_1_SINE-tRNA_18

TAGCTCAATTGGTAAAGATCTCTGGCAAAAGTTCAGAGGTCGCCGGTTCGAGTAGCGTTTGGGACGAAACCATATAACATGTTCTGGTTTTGGGCATGAGGGGATGTATGAGCTTTGACCGAGAACCTCTTTGATTATTCAAAAAAAAAAAAAAA

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

226

Start:

12278489  

End:

12278714

Strand:

+

>scaffold_1_SINE-tRNA_19

TGGAAGCGTCTTGGTCGAATGGTTGATCAAAGGTTTATTAATGGTTCTACTTCATGAGGTTTAAGTTCAAATTCCATATAATACGATTTATTAAAAATATACAAATCAATGGAAGTAAGTTTACAAAAGATCTCTAACATTGTGCAATTATAACCATTTGTCGTGATTCCACTCATTAAAGGTGTCCATCATGAATATAAAGAAGGAAGGATCCTCTGCCGTGTAT

Capsella rubella (v1.1)

ID:

scaffold_1_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

12278696  

End:

12278858

Strand:

+

>scaffold_1_SINE-tRNA_20

AGGATCCTCTGCCGTGTATAACTGAAGGTGTCTCTCTTGAACATGGAAAATGAAATGTACTTAGAGGATAAAGTCTTGTTTGTGGTAGATCTAATAGAGTTGGAGTGAATTATCGGTGGTATAATCATCTTTGTAACATTGTCATAATTTTAATTAAATAATA