ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro109767089767197-
scaffold_1_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro13319069991907131-
scaffold_1_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro9723841472384243+
scaffold_1_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro10860319856032092-
scaffold_1_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro29489981098998402+
scaffold_1_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro19493646189364811-
scaffold_1_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro16194068399406999-
scaffold_1_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro1451498148414981628+
scaffold_1_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro2571910032819100584-
scaffold_3_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro19966190526619250-
scaffold_3_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro10768490586849164+
scaffold_4_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro10977413557741463+
scaffold_4_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro22781606818160907+
scaffold_4_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro16185281188528278-
scaffold_6_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro13458244125824545-
scaffold_6_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro9170543917054481-
scaffold_6_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro18070545147054693-
scaffold_7_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro28030305753030854-
scaffold_7_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro1801634263816342817+
scaffold_8_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro8429308862930969-

< 1 2 > Total 2


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

767089  

End:

767197

Strand:

-

>scaffold_1_LTR-Ngaro_1

TGTTGTAGCTAGAAGTCGCGTATATATATTAAACAAACAATAAGTATTATTAGCAGTAGGAGTAGTAGTGGTGGTAGATAACTAAATATATTGCAGTAGTAGTAGTAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

133

Start:

1906999  

End:

1907131

Strand:

-

>scaffold_1_LTR-Ngaro_2

TTTGTTGTTCCTGTTGTTGAAGCCGCTGCTGCTGTTGCTGAAGCTGATACAGTTGCTGCTGCTGAAACTGAAATTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTTTCTGTGACTGGATCTGAAGCTGCTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

97

Start:

2384147  

End:

2384243

Strand:

+

>scaffold_1_LTR-Ngaro_3

CTCTGTAGAGTTAGCTGCTGTTTCGATGCTGACACTAGAATTGCTGTTACTACTGTTCCAATAATCACCACTACTATTACTACTACTACTAGTAATG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

108

Start:

6031985  

End:

6032092

Strand:

-

>scaffold_1_LTR-Ngaro_4

TGGCTGTTGTTGATTAATCTGCATTTGTTGTTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGGAGTTGTTGCTGCATCTGTTGTAATTGTTGCTGTTGCTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

294

Start:

8998109  

End:

8998402

Strand:

+

>scaffold_1_LTR-Ngaro_5

ATCAGCAACAACAGCTACAACAACAGCACCAACAACAACAGCAGATACAGCAGCAGCAACAACAACAACATCACCAACAGCAACAGATGCCACAACTCCAGCAACAACCACAACAGCAACAGTTGCCTCAACTCCAGCAGCAGCAGCAGCATCAATTGTCGCAGCTCCAACATCATCAACAGCAACAACAGCAGCAGCAACAACAACAACAGCAGCAGCATCAGTTGACACAGCTTCAACACCATCATCAGCAGCAACAGCAGCAGACATCACCGCTGAATCAGATGCAGCAAC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

194

Start:

9364618  

End:

9364811

Strand:

-

>scaffold_1_LTR-Ngaro_6

TGTTGAAAATGTAACTGTCGAGCATGGGACTGTTGTTGCTCCTGTAAGAGCTTCTGATGTAACTGATGTTCTTGTTGCAGCTGATGCTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTCTGCTGTAGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTTTGTTGTTGCTGCAACTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

161

Start:

9406839  

End:

9406999

Strand:

-

>scaffold_1_LTR-Ngaro_7

GACTGTTGTTGCTCCTGTAAGAGCTTCTGATGTAACTGATGTTCTTGTTGCAGCTGATGCTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTCTGCTGTTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTTTGTTGTTGCTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

145

Start:

14981484  

End:

14981628

Strand:

+

>scaffold_1_LTR-Ngaro_8

CCTCAGCAACCCAGTGAACAACTAAGGCAGCAACAGCAGCAACAACAACAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAGCAACAGCAACAGCAACAACAACAACAACAGCAAACAGTTTCCCAGAATACAAACAGTGAAC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

257

Start:

19100328  

End:

19100584

Strand:

-

>scaffold_1_LTR-Ngaro_9

TGCTGTGGCGGAGGCGATTGCAACGACTGCTGCGGCTGAGGAAGAGGAGGAGATTGTAACAAGCGTTGTTGCTGTTGTTGTTGTTGTTGGTATTGCTGTTGTTGAATGAAGTGTTGCTGTTGTTGGAATTGCTGAAATTGCTGCATATCTTGTTGTGGCTGGAACTGTTGCTGTTGTTGTTGGTGTTGTTGTTGAAGCAACTGATGTTGTTGTTGCTGCTGTATTTGTAATTGTTGTTGCTGGAGGAATAGCTGCTG

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

199

Start:

6619052  

End:

6619250

Strand:

-

>scaffold_3_LTR-Ngaro_10

GCCATTGTTTTTGCTGTTGTTGTCATTGTTATTCCCATTGTTGTTGTTGTTATTCCCATTGTTGTTATTGCCATTGTTGTTATTACCATTGTTGTTGTTGTCTTTGTTACTCCCATTGTTGTTGTTGTTGTTGTCATTGTTGCTATTACCATTGTTGTTGTTGTTATTGCCATTGTTACCATCATTGTTATTGTTGTTT

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

107

Start:

6849058  

End:

6849164

Strand:

+

>scaffold_3_LTR-Ngaro_11

CAGCAGCAGCAACAGCAACAACATCAGGTGCAACAACAGCAGTTGCTGCAGCAGCAGCAACAACAGCAGTTACAGCAGCTGAATCATCCTCATCCACAACAGCGGCT

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

7741355  

End:

7741463

Strand:

+

>scaffold_4_LTR-Ngaro_12

AACAAAAACAACAACAACAACATCAGCAGCTACAGCAGCAGCAGCAACAGCAGTTTCATGAACGGTTAAAAGCTCACCATCTTCATCAGCAGCAGCAGCTACAGAAACA

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

227

Start:

8160681  

End:

8160907

Strand:

+

>scaffold_4_LTR-Ngaro_13

CAACAACAATTCTATTCCAACAATCAGTCAATGCAAACAATCTTAGCCGCACAACAGTTCCAGCAACTTCAGATTCATTCACAGAAGCAGCAGCAGCAGCAACAACAACAACAACAGCAGCAGCAACAACAACAACAACAACAACAGCAGCAGCAGCAGTATCAGTTTCAACAGCAACAGATGCAACAGCTTATGCAGCAGCGGATTCAACAGCAGGAACAACAAAA

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

161

Start:

8528118  

End:

8528278

Strand:

-

>scaffold_4_LTR-Ngaro_14

TGGTGGAGCTGATCATGTTGGAGGAGCTGATGCTGAAGGAGCTAATGTTGGAGGAGCTGGTGTTGAAGGAGCTGCTGGTGTTGGAGCTGATGCTGAAGGAGCTGGTGGTGTTGGAGCTGATGCTGAAGGAGCTGGTGTTGGAGGAGCTGGTGGAGTTGGAG

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

134

Start:

5824412  

End:

5824545

Strand:

-

>scaffold_6_LTR-Ngaro_15

TTGCTGCTTGTTGCTGCTGTTGATGTTGCTGTTTCTGCAATTGCTGCAATAGAAGCATTTGTTGTTGTTGCTGTCGCTGCTGTTGTTGTAATTGGTGTTGATAGAGGAGTTGTTGTTGTTGTTGCTGTTGTTGT

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

91

Start:

7054391  

End:

7054481

Strand:

-

>scaffold_6_LTR-Ngaro_16

TTGCTGCTGCTGCTGAGTCTGTTGCTGTAACGGTTGTTGATGTTGTTGCTGCAGTAATTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCAAG

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

180

Start:

7054514  

End:

7054693

Strand:

-

>scaffold_6_LTR-Ngaro_17

AGACTGCGATTGATTGTTATTGCTGTGTTGTTGAGACTGCAACTGTTGTTGCTGCTGCAGCAACTGTTGTTGTTGCTGTTGTTGAGACTGTGATTGTTGTTGCTGCTGGTTCAAAGAGGAGTGAAGCAATTGCTGCAGCTGCTGTTGTTGGGACAACGTAGTTGATGGCTGAGGCAACTG

Capsella rubella (v1.1)

ID:

scaffold_7_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

280

Start:

3030575  

End:

3030854

Strand:

-

>scaffold_7_LTR-Ngaro_18

TGTGGCGGCTGCTGTGATGTTGACTGCTGTTGGTGTTGAGACGCCGGCTGCTGCTGTTGCTGCTGCTGCTGCTGTTGAGAAGGTGGTTGGTTTTGATGTTGTTGTTGTTGCTGCTGCTGCTGCTGTTGCTGTTGCTGTTGCTGATGATGATGTTGTTGTTGCTGCTGTTGCTGTTGTTGTGCACGTTGTTGTAACAAGAGTTGCTGCATTTGTATTTGCTGCTGTTGTTGCTGCTGCTGCTGTGAAACCTGTGGGTGGTGAGATTGTTGCAATTGCTGTT

Capsella rubella (v1.1)

ID:

scaffold_7_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

180

Start:

16342638  

End:

16342817

Strand:

+

>scaffold_7_LTR-Ngaro_19

GTTTGCGTGTACGTGTACGTGGATGCTATGTTTATATGCGTGTGCGTGTACGTGTGCGTGTACGTGGGTGCTATATTGCTATGTTTGTGTGCGTCAGTGCGTGGATGTTATGTTTATATGCGTGTTCGTGAATGCTATATTGCTATGTTTGTATGCGACTATGCGTGGATTTTGTGCATG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

84

Start:

2930886  

End:

2930969

Strand:

-

>scaffold_8_LTR-Ngaro_20

AGTAGTAGCAGTAGCAACACCACCAACAGTAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTACAATTGTGAGTGAACAGAACAAT