Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
165Start:
660519End:
660683Strand:
+>scaffold_1_LTR-Gypsy_1
CCACGAAAATACTCTTACCAGGAAATGCAAGAGAGACGCTCCAAAGGGTTATGTATGTTCTGTGAGGAACCATACTCACCTGGCCACCACCTGAAACACAAGAAATCACAAATCTTTGTTGTTGAATTAGATGAGGATGAGTATTCTGACGAAGAAGAGATGGCT
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1346Start:
661347End:
662692Strand:
+>scaffold_1_LTR-Gypsy_2
GACATTTTTGAAGAACCTGCTGGTTTGCCTCCGTTTAGAGAAGGTTTTGACCATAAGATACCTCTCTCTGCTGATGCTACACCAGTGAACCTGCGACCCTATCGCTACTCTTCACTACAGAAAGACACCATTGACAAAATGGTGAAAGAAATGATCACACAAGGCATTATCCAATGCAGCACAAGTCCATACGCCTCACCTATTGTGCTTGTCAAGAAAAAAGACGGTACTTGGCGCCTTTGTGTCGATTACCGAGGGCTCAACAAACAAACAATCAAAGATAAGTATCCAATACCTTTGCTGGAAGATTTATTAGATGAGCTTGGTGGTGCCAGATACTTCTCCAAACTGGATTTGCGCGCAGGTTTCCACCAAATCCGTATGTCACCCGAGGACATCTACAAAACTGCTTTCAAGACACACTCTGGCCACTATGAGTATTTAGTAATGCCTTTTGGCCTCACTAATGCTCCCTGCACTTTCCAAGGACTGATGAACAATATTTTTCAAGATGTCACTAGAAAATTCCTCCTTGTCTTTTTCGACGACATCCTCATCTACAGTCCAACTTGGGAACTGCACTTGCATCACCTTCAACAGGTCTTCCTCATACTCCGCGCCCATCAATTGTACTTAAAGCCATCTAAATGCACTTTTGGGGCTACTGTGATCGAGTATTTGGGACACTTCATTTCTGCTGAAGGTGTTAGCACAGATCCTAGCAAAATCCGTGCAGTGGAACAATGGCCAACCCCTACAAACCAGAAACAACTTAGAAGCTTTCTTGGGTTAGCTAACTACTACAGGAGATTCATAAAGGGCTACAGCATTATTGCCAGAGCACTCACACTGTTACTGCGCAAAGATGGGTTTTCATGGAACAGCGATGCAGACACAGCCTTCCAGAACCTGAAAAATGCCCTCTCCACTTCTCCTGTTCTAGCTTTGCCAAATTTTGATAAAGATTTTGTTGTTGAGACTGATGCCTCTAATTTGGGTATTGGTGCAGTGTTGATGCAGGAAGGTCACCCTATCTGTTACATCAGTCGTGCCCTTGGTCCCCGTCACCAGAACCTCTCGGTCTATGAAAAAGAATTGCTTGCTGTTGTGCACGCCGTCCAGATCTGGAATGCCTACCTCGCGCATCGTCCATTCATTATCCGCACAGACCAGAAAAGCTTGAAATTCCTCATGGAACAGAAGGTAACTACCCCTTTTCAACATATGTGGTTGTCTAAACTGATGGGCTATACTTATGAGATACAGTACAAACAAGGCAAAGAGAACCACGCAGCCGATGCTCTCTCGCGCGTCACAGGAGCTCAGCTGTTGCACATTGTCCTGTC
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1272Start:
662886End:
664157Strand:
+>scaffold_1_LTR-Gypsy_3
TGGCTACATGATTCTGCTTTGGGGGGTCATTCCGGTAGAGACGCAACACTTCACAGAGTCAAGACACTATTCTACTGGCCAAGAATGAGTCTTGAGGTTCAGAACTACGTCCGCAACTGCAACGTTTGTCAAAGGAACAAGTATGATAATGCAGCAAAACCTGGTTTGTTGAATCCCTTACCAATTCCAAAAGGCGTTTGGGAATCAATTAGTCTGGATTTTGTTGAAGGGTTACCCCCATCCTCAGGCAAACATTGTATACTGGTTGTGATTGATAGGCTGAGCAAGAACGCCCACTTCCTGCCCTTGTCTCACCCATACACAGCCTTGGACGTAGCCCAACTCTATATGGATCATGTTTTCAAACTCCACGGCATGCCTAAAGATGTGATCAGCGATAGGGATCCGACCTTCCTCAGTGAAATTTGGAGGGAAATGTTCAGAGTACACGGCACTGACCTCAAGTTCTCCACCTCTTACCACCCTCAAACAGACGGTCAGACGGAGATCACGAACAAAACTCTGGAAACTTACCTCAGGTGTATGACTGCTGAAGCACCAAAAACATGGTGTAAATGGCTCCCCCTTGCTGAATGGTGGTACAACACAACTTACCACTCATCTATCCGCACAACACCATTTGAGGTAGTGTATGGTCAACCTCCTCCTATACATCTACCTTACCTGCCAGGAGAGAGTCCATCCGCTGTGGTTGACCGTAGCTTACAGAAGCGGGAAGAGGTCATACAAATGCTGAAATTTCATTTACTCAGGGCCCAGAATAGAATGAAACAAGCTGCAGACTCTCGTAGATCAGACAGGTCATTCAAACTGGGAGACTTTGTGTACTTGAAGCTGCAGCCTTACCGCCAAAACTCTCTGAAACCAAGCAATGTGCCGCACAAGTTATCTCCACGTTACTATGGCCCTTTCAAAGTCATTGACAAAGTTGGTGCAGTCGCTTACAAACTAGAGCTGCCATCACACGCCGCCATTCATGATGTGTTCCACGTCAGTCAACTAAAGCTCTGTCCCAATCCATCCACTACCCCAATGTTGCCTCAGTACATGCTGGATATTGGCACAGACAAAGAACCAGAGGCAATCTTAGAGAAAAAAATGGTGAAGTATCGTAACAAAGCTATCACCAAAGTTCTGGTTCAGTGGAAAGGCTCTACACCCGCGGCTGCAACTTGGGAGTTCTACCAGGATTTCATCAACAAGTATCCTTCCTTTGATCCTTGAGGACAAGGATGCGCTGAAGAGGGGAGT
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1245Start:
1348687End:
1349931Strand:
+>scaffold_1_LTR-Gypsy_4
GGAAGGAACGGATCCGGTTAATGTGCGCCCATATCGATATGCACACTTCCAGAAAAATGAAATTGAAAGGCAGGTTAGTGAGATGTTACAAACGGGTATAATCCAGCCTAGTTCAAGCCCTTTTTCGTCTCCAGTACTTCTAGTTAAGAAAAAGGACGGTACGTGGCGTTTTTGTACCGACTATCGTGCATTGAATTCGGTGACGATAAAGGACCGGTTCCCTATACCAACGGTCGATGACATGTTGGATGAACTCCATGGGGCAGCATTCTTTACAAAATTAGACTTAACGGCTGGATACCATCAAGTTCGTATGCATACGGATGATGTTCCAAAGACGGCTTTTCGCACACACAACGGTCACTATGAATATTTGGTAATGCCGTTTGGCCTGTGCAATGCACCATCAACATTCCAAGCTCTCATGAATGACATTTTCCGGCCTATATTGCGAAAATTTGTTTTAGTCTTCTTTGACGACATTCTCGTATATAGCCCGACTTGGGACTCTCACAAGTCGCACGTGGAGCAGGTTTTTTCTATTCTACGACAACAACAACTGGCGGTCAAGCTTAAAAAATGTGAGTTTGGGCAACGTGAGTTGGAGTACCTAGGCCATATAATCTCGGATGCTGGAGTCAAAGTGGATAAATCGAAGATACAAGCAATGTTAGATTGGCCTACACCAACGACGATTACGGAGTTACGTGGATTTTTGGGCTTAACCGGTTATTATCGAAAGTTTGTACAAGACTACGGAATCATAGCCCGACCTTTGACCAACCTCTTGCGTAAGGGCTCCTTTGGATGGGGACCAGAGGCGGATAAAGCTTTCCTTAAGCTGAAAGACGCCATGACAACAACGCCAACGTTAGCTTTGCCGGATTTTACTAAAACTTTTGTCATACAAACTGATGCGTCCGGAGATGGTATTGGGGCGGTATTGACTCAAGATGACCAGCCAATCGCATTTATGAGTCGCTCTTTGGGGGTTACAAAGAAGTCATGGTCGACATACGCACGAGAAATGTTGGCTATTGTGGTTGCTATTCGGACGTGGAGGCCATATTTGATTGGACGACACTTTATTATTCAAACAGATCAGCGGAGCTTACGTTACCTCTTGGAACAACGGATTTTGACCCCGGAGCAGCATAAATGGATGGGTAAATTAGTCGGGTATGATTATGAGATTACGTATAAACCCGGTAAAGCCAATATGGTGGCAGATGCTTTATCTAGAGT
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
606Start:
1350213End:
1350818Strand:
+>scaffold_1_LTR-Gypsy_5
GACAGTTTTACTGGCCAGCTATGCACCGGGTCGTCAAACAGTACGTCGCTGAGTGTGAAATTTGTCAACGCGCCAAGTCGACTTCTCTTGCACCGGCCGGGCTTCTCCAACCATTACCTATTCCGGATCAAGTTTGGGAGGATATCTCCATGGACTTTGTGGATGGACTACCTCGTTCGAATGGTCATACAACAATTATGGTAGTGGTTGATCGGTTGACAAATTCAGCTCATTTGGTTCCCTTGGCTCACCCCTATACGGCTAAGGTCGTCGCAGCTAAATTTGTTGATTATATTGTCAAATTACACGGTATGCCCCGGTCAATTGTCAGTGACCGCGATCCCATTTTTGTGAGCTTGTTTTGGAAAGAGTTTTGGAAATTGGCAGGTACAAAGTTGCGGATGTCTTCCGCCTATCATCCACAGACGGATGGTCAAACAGAGGTGGTTAATCGGTGTATCGAGCAGTTTTTACGTTGTTTTGTTCAGAACCGCCCTACACAATGGAGTTCTCTTCTTCCTTGGGCCGAGTTTTGGTATAATACTTCGTATCATTCGTCGACGGGTACTACTCCTTTCCAAGCTCTATATGGTCGGCCACCGCCTG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
179Start:
1351004End:
1351182Strand:
+>scaffold_1_LTR-Gypsy_6
CTCCAGCCGTATCGGCAGCGGTCAGTGTTACGCCGGACGTCGCAGAAGCTTGCACATAAATATTTTGGACCCTTTCAGGTCGAGGAACGGGTTGGTGAAGTGGCTTATCGTCTCAAGTTACCTTCCGGGTCCCGAATACATCCAGTCTTTCATGTTTCTCTACTTAAGCCGCATGTGGG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
582Start:
4568476End:
4569057Strand:
->scaffold_1_LTR-Gypsy_7
ACCTGTTGGTTCTGTCCCAATACCTTTTTCAATTGAGAGACATGAAAGACAGAATGAATCTTTGATTCTTCTGGAAGTTGCAATCTATATGCTGCCTTCCCAATCTGTTCCATCACCTCATACGGACCATAGTACTTGGCTGCCAACTTCTGACAAGCTCGCTTTGCAACTGATTGTTGCCTGTACGGTCTCAATTTCAGAAAAACCCAATCACCAACTTCATATGCAATATCTCTGCGATGTTTATCAGCATTGTTTTTCATCAATTGTTGTGCATGAATCAAGTGCTTCTTAATCTGATCTAACATTGAATCCCTTTCCTTCAGCATCACTTCTAATTCTGAAACTTTTGTGGAATGTGCTTCAAAACGCAGTATGGAAGGAGGATCTCGACCATATAAAACTTTGAATGGTGTAGTCTTCAATGCCGTATGATATGATGAATTGTACCATAATTCTGCCCAAGACAAATACTGATGCCATGTCTTAGGATGAGTGGAAGCAAAACACCGTAAATACGTCTCCAAACATCTATTCAACACCTCCGTTTGCCCATCTGTTTGGGGTTGAAAAGCTGTGCTA
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
171Start:
4569161End:
4569331Strand:
->scaffold_1_LTR-Gypsy_8
CCAAAACGCACTTAAGAATGTGTTGCCTCTGTCTGAAACTATAGAAGCTGGAAATCCATGTAACTTCACCACCTCTTTAATGAATAACCGCGCTACATCAGAAGCTGAGAAGGGATGTTTAAGACTTAAGAAATGACTGTATTTACTCAGCCTATCCACTATCACCAATAT
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1626Start:
4569459End:
4571084Strand:
->scaffold_1_LTR-Gypsy_9
TGGCAACGGCTGCAATAAACCGGCTGGAGACAGTGTAGAATACTTATGTCTTTGGCAAACATCACACTCCGAGACAAACTTTTGAACATCTTTCATCAAACCATCCCAATGAAAAGACTGTTGTAATCTCTTAACAGTTTTTAACACACCTGAATGGCCTCCTAACAACCCGGTATGATATTCCTCCAATATCATTGGAATGAACTTTGAAGTTTTTGGTAAGACTAATCTGTTCTTGAACCATAATCTTCCATTTCTCACTTCATACCCATTGTCCTTGTTTTGATTTGCTATACAAGACTGAATATTATTCTGGATACCTTCATCCTTCTCAATCTCTTCATAAATGTCATGAAGCTGCAACACAGTTGGTACTGTCAATGCCATCAAAACAGAGGCTTGTATTACTCCCAGGGGTTGTATCTTCCGAGATAGACCATCAGCTGCAGTATTTTCCACTCCAGGCTTATATATGATTTCAAAATCATAATTCAACAGCTTGATTAACCACTTTTGATAGTCCATTGTCACCTCTCGCTGATCTAAAAGGAATTTTAAACTTTTTTGATCTGTATGAACCACAAAATGCCTTCCAAACAAATAATGTTTCCACTTTTGTATAGAAAGCACTATAGCCATCAATTCCCTTTCATATACTGGTTTTAGCTGCTCCTTAGCAGTTAAACCATGGCTAAAAAATGCAATAGGTCTTCTATTCTGCATTAAAACTGCGCCTAACCCATATCCTGAGGCGTCTGCTTCCACTGTAAAAACTTCAGCAAAATCTGGTAAAGACAAAACCGGGGCAGTAGACATTGCCTTCTTCAAGTTATCGAATGCTACTTGTGCTGTATTATTCCATTCAAAGCTGTCCTTTCTCAGTAGCTCTGTTAATGGTCTTGCTAAAACTCCATATCCTTTAATGAACCTTCTATAGTACCCAGTCAGACCCAAGAATCCTCTCAATTCCTTCACTGACTTAGGGGTCAACCATTCAGTCATTGCCTTTGTTTTTGCTGGATCAGTAGATACCCCATCACTAGAAATGATATGTCCCAGATAATCCACTTGTTTTTGACCAAACATGCATTTCTTTTTGTTGGCAAATAGCTGATTCTCTTCCAATATTTTCATCACTATTTCCAAATGTTCAATATGTTGTTCCATAGACGAGCTATAGATCAAAATATCGTCAAAAAATACCAAGATGAATCTCCTTAAAAATGGCCTAAACAACTCATTCATGAGTGCTTGAAACGTCGTTGGAGCGTTTGTTAACCCAAACGGCATGACGAGAAACTCGTAGTGTCCATCATGAGTCCTAAAGGCTGTTTTGGCCACATCTTCTTCTCGCATCCTTATCTGATGATAACCTGCTCTAAGGTCCAATTTTGAAAACCAAACTGAGCCATTCAACTCATCCAAGAGTTGGTCAATCATTGGTATCGGAAACTTATCTGGTACTGTCACTCTATTCAATGCTCTGTAGTCAACACAAAAACGCCAACTATTGTCTTTCTTTTTAACTAAAAGCACTGGACTTGAGAATGGACTGTGACTTGGTCTTATAATTCCGGAATCCAACATCTCCTTGACCATCTTCTCTATGATCTCTTTCTGGGCGTG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
572Start:
4571463End:
4572034Strand:
->scaffold_1_LTR-Gypsy_10
TATAAAAATGACATCTCATTTTTCTGCCAGTTCACCTTACAGTCTCCCAATGTGCTCAGCCAGTAAACTCCCAAAATAATGTCAATCTGACCTAACTCCAACACCACAAAGTCTGTAGTGAATTCCAAATCTTGAACTGAAAATTTTACTTTCTCACAAACTCCCATTCCTTGGACTGTAATCCCTGTACCCAGCCTCACATTAAGGTTAGGATCGTCTCTACATTTCAATTTCAGTTTTGTAACCGCTGCTGGAGATATAAAATTGTGGGTTGCCCCACTGTCCAACATTATAATCACACTAGCAGTCCCAACCATACCTCTCACTTTAGTGGTTGATGGAGAAGAAATCCCTCTAAATGATGAGAATGATAGTGCCATGCACTCACCAGCAACTTCTTCTACTAACTCCTCGTCACTATTCCCATTCAATACTTCAACCTCATAGCCATTAAAGACAGTCAACACCCTTAATTCTTTGTTTGGACATTTATGATCTTTGTTCCAAGGACCATCACACTTAAAGCATATTCTTCTTCTTCGCTTTTCATCTAATTCAGCATTAGAGTTGTG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
337Start:
4572257End:
4572593Strand:
->scaffold_1_LTR-Gypsy_11
TGGCAAATTCCTTGGTTTCTGCATATGAACTAACTCTTGCATCTCCTGAGTTAACCCATTCAAAAAAATGCCCTCTAATTTCTGATCATCCAACCCAGTTACTTGGGAAGATAAGTCTTCAAACCTCTGCACATAATCAGCTATAGATCCCGTTTGCTTAATGCAAAACAAACTTTGGCTTGGACCTCTAATCTTCAAGTTCCCAAAGCGTAACAGCAAACTTGTCTTAAACTGACTCCAAGTCTCAAAATCTTTTCTGTTTACTTCCCAATTGTACCAGCTCAAAGCTTCTCCTTGTAAACTCACTGATACCAAAGCTAATTTCTCAGCATCATTA
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
171Start:
5244290End:
5244460Strand:
->scaffold_1_LTR-Gypsy_12
GGCAAATCTTCTCTTAATCTTTTTATGAAACCAAATTTAAGGTCATGTGTTCTTGGTGAAAATTTAAAAATATCTTACCCTTTTACATTTCTTGCATAATAAAACTCAATGAGCTATTTCATTTTCAGTTTTACATTCCTATCTTTTTATAAGCTCTTGATGAGCATGAAT
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
358Start:
6914811End:
6915168Strand:
->scaffold_1_LTR-Gypsy_13
TAGACAAGTCAATAATGCGAAACAGATTACTTGAATTCCAAACGAGGTTCTAGTACAAACGACAAGTTCGCTAATAAGCTATTACATCGTTTTCAACACTAGACCGAATTATTAAAACTACCCCAATCCACCATCCTTCCCTTTCCTTGCCTTCGTCTCACGAGCTGGTTCAGCCACAAGAATTACTTCCATTTCCTGCATCCAAAAGGAGGCGTAAGCAAACGAATTTGCTTAGTGGAGCGGTCGTCCCGTCACACTTGGCACAGTCAAGAAATCACATTCATTTCGATCGATTCAAGGAGTTAAACAAGCAAGCCATAAACATAACATACCGTCGAGATAATTATCGGAACCACCA
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
382Start:
6915203End:
6915584Strand:
->scaffold_1_LTR-Gypsy_14
ATAAACCATGACAAGCAAGAAAACATCAATGAATCAATCAATAAAAACGACCCAAGACTCGGCCACGGTCACGCTCTCACCTTTCTCACACGGATTCACTTTCTGACACCTCTAGTCGCTTACTCGTCCGATCGGATCCAATAAACTCTCGCAAAGCACCCGGATCTACACCATGAGCACAGATCTAACTCTTTTACCGACAATACTCGAAGAACAATCGATAAACACCAAGTTTACACGATACTTACCAAGATTCTCGAGAATTACTCGATCTACTCTCGATCTTTCTCACGGATTCTCGACAAACACCTAACTTTCTCGATGAAAAGGTTGCCGATCGCCTTTAGGGTTCTTACGCGTGAAAACGCTAACAAATGGTCGG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
4268Start:
6916062End:
6920329Strand:
->scaffold_1_LTR-Gypsy_15
TCTCCCCCACTTAGAATAGATTCGTCCTCGAATCTAAACTTTCTCTTTCGAGACTTCTCGCTTCTCAAACCATTTCTTGAAATTCACCCTCATTACTTCCTCCGGTTCCCAAGTAGTCTCTTCTTCTCCGTCACAATCCCACACAACTTGAATCAACTTAACCTTTTTCTTTCTTCCAGCTCTTGACTTCCTCCCAATAATTCGAACTGGTCTTCCAACAATAGTCATATTCGCTTGCAAGTCCGCTGGAAGCTCCGTTGAGACATTCTCTCGAGGTGTTATGCATTTCCTTAGCATAGACACATGAAACACTTTGTGAAATGCTTTCATTGCCGGAGGCAATTCAAGTCGATAGGCCACTGCTCCAATTCTTTCCAGAATTCGGTACGGTCCCATGTACCTCGGAGTTAACTTTGTGTTCAAGGCTGCACGGTCTTTACCCTTATAAGTAACCGTCTTAAGGTAAACCATGTCTCCCACCTGAAATTCCAACTCTCGCCGACGCTTATCGGCATAACTCTTTGTCTATCTTGAGCTTCTTTCATTTTAGCCTTCAACACTTTGATCTTCTCGGTCGTTTCTTGCACAAAGTCCCGACCATAGACACTTCGCTCCCCCACTTGTGTCCAACACAGCGGTGTTCGACAAGGCCTACCATACAACGCTTCATATGGTGACATTCCAATACTCACTTGATAACTATTGTTATAAGTAAACTCCGCCAAATGCAAGTAACTCGTCCAATCTCCACCCCAATCCAGAACACTCGCTCTCAACAAATCCTCAAGTGTTTGGATTGTTCTCTCGGACTGCCCGTCCGTTTGTGGATGATGAGCCGTGCTCATGTTCAATCTTGTACCAAATTGATTTTGAAGAGCTTTCCAAAACCCAACAGTAAACTTAGAGTCACGATCCGATACTATACTCGCCGGCACTCCATGATACCGAACGATATTCTCCACGTAAAGCTTTGCAAGCTTCTCGGTTCCATCTGTCTTATTCATCGGCAGAAAATGTGCGGACTTCGTTAATCGATCGACAATAACCCAAATAGAATCTTTCTCCTCGCACATAGGCAATCCGGTAACAAAATCCATGGTTATCATATCCCATTTCCACTCGGGAATTGGTAAACTTTGCAACAGTCCTCCTGGAACTTGATGTTCAGCTTTAACTCTTTGACAAGTCGAACAAGAAGCAACCCATCTAGCAACATCCTCTTTCATCCCTCGCCAATGATAATATCTCTTCAAGTCTCGATACATTTTTGTTGATCCCGGATGTATCGAAAACTTAGACTGATGTGCTTCCTTAAGAATTTCTTCTCGAAGTTCCTTATCCTTCGGAACGCACACACGGCCCTTTACCAATATCGTCCCATTGCTCGAAGTCTGGTACTCGGTCTTATCATTCTTCGATAACTTAATGAGTTCCTCATCTTTTTCTTGTGCTATCCGAACACGAGTCAATAAATCGGCTTGATCCGCGGCACCCAAACCCAAAGGCTCTAACTCTTCCGATATCGCTTCCAAGCGTAAGGTACCAACCATGTCAACCAAACTTTCCATCTCCTTCTCAGTACTTGAAACAACTCTTTTCCGGCTTAATGCATCGGCTACAAGGTTTGCTTTACCCGGATGATATTCGATATCGACATCGTAGTCGGCCACTAACTCCATCCATCTTCGCTGCCGCAAGTTCAATTCCGGTTGGGTGAAAATATACTTGAGACTTTTGTGGTCCGTGAAAACTTGAACTTTCCCACCGTAAAGGTAAGAACGCCAAATTTTCAAACCAAACACGACCGCCGCCATTTCCAAGTCGTGAGTGGGGTAATTCGCTTCGTGCTTCCTGAGCTGCCGAGAGGCATAAGCGATTACCTTACCATGCTGCATTAAGACACATCCAAGTCCCATCCTTGATGCATCTGTATAGACCACATAAGGTTTATCCGGTTCCGGCAATGCCAATACCGGTGTACTTGTAAGCATCTTCTTAAGCTCCGAGAAACTCTTCTCACAATCTGTCGACCACACGAATGGTACATCTTTCCCCGTTAACTTTGTCAATGGATGCGCCATGCTTGAAAATCCCTTAACAAAACGTCGGTAATACCCAGCCAAACCAAGAAAACTTCTTATCTCCGATGCATTTTGAGGTTTCGGCCAATCCGCAATTGACTTGATCTTCTCATGATCGACGGACACTCCTTTATCCGACACCACATGCCCCAAAAATCCAATTTCTCTTTGCCAAAAGCTACACTTACTTAGCTTGGCGAACAAATTATGTTCTCTTAGCTTACACAACACCTTCCTCAGATGCACGCCGTGCTCTTCCGGATTCTTCGAATAAACTAGAATGTCATCAATAAAGATGATAACAAACTCGTCCAAGTATTCCCGGAATACATTGTTCATGAGCTTCATGAAAGCTGCGGGAGCATTAGTCAGCCCGAAAGGCATGACAACGAATTCGTAATGCCCGTACCTTGTCCGAAAGGCCGTCTTACTGATATCCGACTCATCGATCGGAATTTGATGATAGCCCGAGGCTAGATCAATCTTCGAGAAACAAGTAGCACCTCTAAGTTGGTCCAACAACTCGTCGATCCTCGGAAGAGGGTACTTATTCTTCACCGTCACTCTATTCAGGCCGCGGTAGTCGATACAAAGTCTGAAACTTCCATCTTTCTTATTTACAAAGAGAACCGGTGCACCCCAAGGTGAACTGCTTGGTCTCACAAATCCTTTGTCCATTAGCTCACTAAGCTGCTTCTTCAATTCGGCCATTTCCGCCGGAGCCATCCGATATGGTGACTTAGAGATTGGAGCTGTTCCCGGCTCAAGTTGAATCGTGAACGGATCCGAACGTGTCGGTGGCAAACCAGACAACGCTCCGAACACGTCTTTGAAATTTTGCACCACCGGAATATCCTTAACTTCTTGCTCGGTTCCCACTTGCACCGTAGAGATTGTCGCCAGGTACGCTTCATACCCTTTCTGAATCATATGCTCCGCTTGAACTGCAGAAACAATCAAACTTCCGGACGATGGTTTGATTCCCCGATACACCAGTAAACCTTTAGGCGTCTCGAATACAACACGTCCACGGCGACAGTCCAAATGTGCCGAATATTTGCCGAGCCAGTCCATTCCCATGATTACATCATGATCATCTATGCGGCAAATCACCAAGTCCGTGGGCATATCAACTCCACAAATCATCACGGAGATGTTCCGGACCTTTCCATAGGTCATCATCCTTTGTCCACCGGCTGCTTTAACAAGACCAAAGTCTTGTCCGGGTTCCTTTTGAAACCCACCTTTACCAATCATTTCCGGGGACACGAAGCAACGTGAAGCCCCGGAATCAAACAATACATGGGTTTCCACACCACTCATGAGAATGGTCCCTACACATTTACCTAAAATGCTAAGAACCCAACCCGACAAGCAACAGGCAAGTTACCAAAAACATTTGCTAAGGTAAGTGACAAGACTTACCCGTGATCGGACGTGAAGTGCTTGCCTCATTCACATACTCGTCGGACACCGAGTAAACCCTTGGCATGATTGCTGGCCTCTTAGGCGGTGGTGGCAACGCCTCACTTGGCCGCTTCCCAGCTAGCTGCATAAGCTTCGGACAATTAGGCCTCAAATGACCAGCTTCACCACAATTGAAACATGACCGCGTATCCGGCTGTCGATCCCTTTCCGGACACTCGCTGATCCGATGATCCTTGCTACCACAACGGAGACATTGTCCCGAAAGGAGCCTGCACGTACCAGAATGCATCTTCTTGCAAGTCGGACACACTCGGTTCTGTCCCGATGACTTTCCTTGGAAATTCGTTTTCCCCCAATTCTTCTTCTGTCCGCCACCTTGGTCAGATTTGCTTTGCGGAGCAGGTTGAGTTGACACTTGAGAATTCGACAGCTTTGCCTTCTCCTCAAGGCGAGCTTCAAGCAATGCTGCCTTTTCCACCAACTCGGATAGAGTCGCATAATCCCGGATGCTACAACCGATCTGGAGATCAACATCCAACGCACGCATGAATCGGCGAATCTGGGCTTGCTCGTCATCCATGTCTCGGCCACCAAACTTCTTAAGCCGGTCAAACTCCACTTGCAATTCCCTCACCGTCATTGATCCTTGACGGAAGTCCAAAAACTCCGACTCAAGCTTGTTGCGAGCTTCTTGCGGAAAATACTTAGCGTGAAACAAATCACGAAAAGTTTCCCACGTACAGTTCGGATTCGCCATCC
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
319Start:
6920430End:
6920748Strand:
->scaffold_1_LTR-Gypsy_16
ACCAAGTATCCGCCTCCTCAGCAAGGTAGTGTGTAGCAATGTCCTTCCGATACGCAATCGGACATCGAACAGAGTTGAAGTTTCTCTCCAACCGAGTCCTCCATTCAACCGCCTTGATAGGGTCAGCACCACCGGAGAAGTAACTCGTCCCCAACTTCATCATGTGATCCATCACAGTCAAGTACGATGGATTATTCTCCTGACCCACTGGTGGTGCGTTCCCAACTGGTGGATTCTCCGCCGGCTGTGGAGCTAATCTTTCCAAGATTTGCGCCAACACGCCCAACACTTGCCCCATTTCGGGAGGAACAGCACCCGC
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
170Start:
6920886End:
6921055Strand:
->scaffold_1_LTR-Gypsy_17
CCATCTGCAAATACCGGATTCGATACTAAGTTAGTCTATTACTAACTTAGTTTCTAATTACAGAAAAATAACCAGTCTTACCGTGAGACATCAGGCTTCGGAAGGATGGATTTACATACTAACCCGTTTACACTAAGACTGTCCTAGAATCGACCATGCTCTGATACCAA
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
358Start:
6921145End:
6921502Strand:
->scaffold_1_LTR-Gypsy_18
TAGACAAGTCAATAATGCGAAACAGATTACTTGAATTCCAAACGAGGTTCTAGTACAAACGGCAAGTTCGCTAATAAGCTATTACATCGTTTTCAACACTAGACCGAATTATTAAAACTACCCCAATCCACCATCCTTCCCTTTCCTTGCCTTCGTCTCACGAGCTGGTTCAGCCACAAGAATTACTTCCATTTCCTGCATCCAAAAGGAGGCGTAAGCAAACGAATTTGCTTAGTGGAGCGGTCGTCCCGTCACACTTGGCACAGTCAAGAAATCACATTCATTTCGATCGATTCAAGGAGTTAAACAAGCAAGCCATAAACATAACATACCGTCGAGATAATTATCGGAACCACCA
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
382Start:
6921537End:
6921918Strand:
->scaffold_1_LTR-Gypsy_19
ATAAACCATGACAAGCAAGAAAACATCAATGAATCAATCAATAAAAACGACCCAAGACTCGGCCACGGTCACGCTCTCACCTTTCTCACACGGATTCACTTTCTGACACCTCTTGTCGCTTACTCGTCCGATCGGATCCAATAAACTCTCGCAAAGCACCCGGATCTACAGCATGAGCACAGATCTAACTCTTTTACCGACAATACTCGAAGAACAATCGATAAACACCAAGTTTACACGATACTTACCAAGATTCTCGAGAATTACTCGATCTACTCTCGATCTTTCTCACGGATTCTCGACAAACACCTAACTTTCTCGATGAAAAGGTTGTCGATCGCCTTTAGGGTTCTTACGCGTGAAAACGCTAACAAATGGTCGG
Capsella rubella (v1.1)
ID:
scaffold_1_LTR-Gypsy_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
89Start:
8097312End:
8097400Strand:
->scaffold_1_LTR-Gypsy_20
GTGATCCATTTGCCTCATTAAAAACCATGCTGAGAAAACCCATTGGGACAAAACTCAGTCATGGGAAAAAGAGTACAAATTTCGCACCT