ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Gypsy_1 RetrotransposonsLTRLTR-Gypsy165660519660683+
scaffold_1_LTR-Gypsy_2 RetrotransposonsLTRLTR-Gypsy1346661347662692+
scaffold_1_LTR-Gypsy_3 RetrotransposonsLTRLTR-Gypsy1272662886664157+
scaffold_1_LTR-Gypsy_4 RetrotransposonsLTRLTR-Gypsy124513486871349931+
scaffold_1_LTR-Gypsy_5 RetrotransposonsLTRLTR-Gypsy60613502131350818+
scaffold_1_LTR-Gypsy_6 RetrotransposonsLTRLTR-Gypsy17913510041351182+
scaffold_1_LTR-Gypsy_7 RetrotransposonsLTRLTR-Gypsy58245684764569057-
scaffold_1_LTR-Gypsy_8 RetrotransposonsLTRLTR-Gypsy17145691614569331-
scaffold_1_LTR-Gypsy_9 RetrotransposonsLTRLTR-Gypsy162645694594571084-
scaffold_1_LTR-Gypsy_10 RetrotransposonsLTRLTR-Gypsy57245714634572034-
scaffold_1_LTR-Gypsy_11 RetrotransposonsLTRLTR-Gypsy33745722574572593-
scaffold_1_LTR-Gypsy_12 RetrotransposonsLTRLTR-Gypsy17152442905244460-
scaffold_1_LTR-Gypsy_13 RetrotransposonsLTRLTR-Gypsy35869148116915168-
scaffold_1_LTR-Gypsy_14 RetrotransposonsLTRLTR-Gypsy38269152036915584-
scaffold_1_LTR-Gypsy_15 RetrotransposonsLTRLTR-Gypsy426869160626920329-
scaffold_1_LTR-Gypsy_16 RetrotransposonsLTRLTR-Gypsy31969204306920748-
scaffold_1_LTR-Gypsy_17 RetrotransposonsLTRLTR-Gypsy17069208866921055-
scaffold_1_LTR-Gypsy_18 RetrotransposonsLTRLTR-Gypsy35869211456921502-
scaffold_1_LTR-Gypsy_19 RetrotransposonsLTRLTR-Gypsy38269215376921918-
scaffold_1_LTR-Gypsy_20 RetrotransposonsLTRLTR-Gypsy8980973128097400-

< 1 2 3 4 5 > Total 342


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

165

Start:

660519  

End:

660683

Strand:

+

>scaffold_1_LTR-Gypsy_1

CCACGAAAATACTCTTACCAGGAAATGCAAGAGAGACGCTCCAAAGGGTTATGTATGTTCTGTGAGGAACCATACTCACCTGGCCACCACCTGAAACACAAGAAATCACAAATCTTTGTTGTTGAATTAGATGAGGATGAGTATTCTGACGAAGAAGAGATGGCT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1346

Start:

661347  

End:

662692

Strand:

+

>scaffold_1_LTR-Gypsy_2

GACATTTTTGAAGAACCTGCTGGTTTGCCTCCGTTTAGAGAAGGTTTTGACCATAAGATACCTCTCTCTGCTGATGCTACACCAGTGAACCTGCGACCCTATCGCTACTCTTCACTACAGAAAGACACCATTGACAAAATGGTGAAAGAAATGATCACACAAGGCATTATCCAATGCAGCACAAGTCCATACGCCTCACCTATTGTGCTTGTCAAGAAAAAAGACGGTACTTGGCGCCTTTGTGTCGATTACCGAGGGCTCAACAAACAAACAATCAAAGATAAGTATCCAATACCTTTGCTGGAAGATTTATTAGATGAGCTTGGTGGTGCCAGATACTTCTCCAAACTGGATTTGCGCGCAGGTTTCCACCAAATCCGTATGTCACCCGAGGACATCTACAAAACTGCTTTCAAGACACACTCTGGCCACTATGAGTATTTAGTAATGCCTTTTGGCCTCACTAATGCTCCCTGCACTTTCCAAGGACTGATGAACAATATTTTTCAAGATGTCACTAGAAAATTCCTCCTTGTCTTTTTCGACGACATCCTCATCTACAGTCCAACTTGGGAACTGCACTTGCATCACCTTCAACAGGTCTTCCTCATACTCCGCGCCCATCAATTGTACTTAAAGCCATCTAAATGCACTTTTGGGGCTACTGTGATCGAGTATTTGGGACACTTCATTTCTGCTGAAGGTGTTAGCACAGATCCTAGCAAAATCCGTGCAGTGGAACAATGGCCAACCCCTACAAACCAGAAACAACTTAGAAGCTTTCTTGGGTTAGCTAACTACTACAGGAGATTCATAAAGGGCTACAGCATTATTGCCAGAGCACTCACACTGTTACTGCGCAAAGATGGGTTTTCATGGAACAGCGATGCAGACACAGCCTTCCAGAACCTGAAAAATGCCCTCTCCACTTCTCCTGTTCTAGCTTTGCCAAATTTTGATAAAGATTTTGTTGTTGAGACTGATGCCTCTAATTTGGGTATTGGTGCAGTGTTGATGCAGGAAGGTCACCCTATCTGTTACATCAGTCGTGCCCTTGGTCCCCGTCACCAGAACCTCTCGGTCTATGAAAAAGAATTGCTTGCTGTTGTGCACGCCGTCCAGATCTGGAATGCCTACCTCGCGCATCGTCCATTCATTATCCGCACAGACCAGAAAAGCTTGAAATTCCTCATGGAACAGAAGGTAACTACCCCTTTTCAACATATGTGGTTGTCTAAACTGATGGGCTATACTTATGAGATACAGTACAAACAAGGCAAAGAGAACCACGCAGCCGATGCTCTCTCGCGCGTCACAGGAGCTCAGCTGTTGCACATTGTCCTGTC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1272

Start:

662886  

End:

664157

Strand:

+

>scaffold_1_LTR-Gypsy_3

TGGCTACATGATTCTGCTTTGGGGGGTCATTCCGGTAGAGACGCAACACTTCACAGAGTCAAGACACTATTCTACTGGCCAAGAATGAGTCTTGAGGTTCAGAACTACGTCCGCAACTGCAACGTTTGTCAAAGGAACAAGTATGATAATGCAGCAAAACCTGGTTTGTTGAATCCCTTACCAATTCCAAAAGGCGTTTGGGAATCAATTAGTCTGGATTTTGTTGAAGGGTTACCCCCATCCTCAGGCAAACATTGTATACTGGTTGTGATTGATAGGCTGAGCAAGAACGCCCACTTCCTGCCCTTGTCTCACCCATACACAGCCTTGGACGTAGCCCAACTCTATATGGATCATGTTTTCAAACTCCACGGCATGCCTAAAGATGTGATCAGCGATAGGGATCCGACCTTCCTCAGTGAAATTTGGAGGGAAATGTTCAGAGTACACGGCACTGACCTCAAGTTCTCCACCTCTTACCACCCTCAAACAGACGGTCAGACGGAGATCACGAACAAAACTCTGGAAACTTACCTCAGGTGTATGACTGCTGAAGCACCAAAAACATGGTGTAAATGGCTCCCCCTTGCTGAATGGTGGTACAACACAACTTACCACTCATCTATCCGCACAACACCATTTGAGGTAGTGTATGGTCAACCTCCTCCTATACATCTACCTTACCTGCCAGGAGAGAGTCCATCCGCTGTGGTTGACCGTAGCTTACAGAAGCGGGAAGAGGTCATACAAATGCTGAAATTTCATTTACTCAGGGCCCAGAATAGAATGAAACAAGCTGCAGACTCTCGTAGATCAGACAGGTCATTCAAACTGGGAGACTTTGTGTACTTGAAGCTGCAGCCTTACCGCCAAAACTCTCTGAAACCAAGCAATGTGCCGCACAAGTTATCTCCACGTTACTATGGCCCTTTCAAAGTCATTGACAAAGTTGGTGCAGTCGCTTACAAACTAGAGCTGCCATCACACGCCGCCATTCATGATGTGTTCCACGTCAGTCAACTAAAGCTCTGTCCCAATCCATCCACTACCCCAATGTTGCCTCAGTACATGCTGGATATTGGCACAGACAAAGAACCAGAGGCAATCTTAGAGAAAAAAATGGTGAAGTATCGTAACAAAGCTATCACCAAAGTTCTGGTTCAGTGGAAAGGCTCTACACCCGCGGCTGCAACTTGGGAGTTCTACCAGGATTTCATCAACAAGTATCCTTCCTTTGATCCTTGAGGACAAGGATGCGCTGAAGAGGGGAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1245

Start:

1348687  

End:

1349931

Strand:

+

>scaffold_1_LTR-Gypsy_4

GGAAGGAACGGATCCGGTTAATGTGCGCCCATATCGATATGCACACTTCCAGAAAAATGAAATTGAAAGGCAGGTTAGTGAGATGTTACAAACGGGTATAATCCAGCCTAGTTCAAGCCCTTTTTCGTCTCCAGTACTTCTAGTTAAGAAAAAGGACGGTACGTGGCGTTTTTGTACCGACTATCGTGCATTGAATTCGGTGACGATAAAGGACCGGTTCCCTATACCAACGGTCGATGACATGTTGGATGAACTCCATGGGGCAGCATTCTTTACAAAATTAGACTTAACGGCTGGATACCATCAAGTTCGTATGCATACGGATGATGTTCCAAAGACGGCTTTTCGCACACACAACGGTCACTATGAATATTTGGTAATGCCGTTTGGCCTGTGCAATGCACCATCAACATTCCAAGCTCTCATGAATGACATTTTCCGGCCTATATTGCGAAAATTTGTTTTAGTCTTCTTTGACGACATTCTCGTATATAGCCCGACTTGGGACTCTCACAAGTCGCACGTGGAGCAGGTTTTTTCTATTCTACGACAACAACAACTGGCGGTCAAGCTTAAAAAATGTGAGTTTGGGCAACGTGAGTTGGAGTACCTAGGCCATATAATCTCGGATGCTGGAGTCAAAGTGGATAAATCGAAGATACAAGCAATGTTAGATTGGCCTACACCAACGACGATTACGGAGTTACGTGGATTTTTGGGCTTAACCGGTTATTATCGAAAGTTTGTACAAGACTACGGAATCATAGCCCGACCTTTGACCAACCTCTTGCGTAAGGGCTCCTTTGGATGGGGACCAGAGGCGGATAAAGCTTTCCTTAAGCTGAAAGACGCCATGACAACAACGCCAACGTTAGCTTTGCCGGATTTTACTAAAACTTTTGTCATACAAACTGATGCGTCCGGAGATGGTATTGGGGCGGTATTGACTCAAGATGACCAGCCAATCGCATTTATGAGTCGCTCTTTGGGGGTTACAAAGAAGTCATGGTCGACATACGCACGAGAAATGTTGGCTATTGTGGTTGCTATTCGGACGTGGAGGCCATATTTGATTGGACGACACTTTATTATTCAAACAGATCAGCGGAGCTTACGTTACCTCTTGGAACAACGGATTTTGACCCCGGAGCAGCATAAATGGATGGGTAAATTAGTCGGGTATGATTATGAGATTACGTATAAACCCGGTAAAGCCAATATGGTGGCAGATGCTTTATCTAGAGT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

606

Start:

1350213  

End:

1350818

Strand:

+

>scaffold_1_LTR-Gypsy_5

GACAGTTTTACTGGCCAGCTATGCACCGGGTCGTCAAACAGTACGTCGCTGAGTGTGAAATTTGTCAACGCGCCAAGTCGACTTCTCTTGCACCGGCCGGGCTTCTCCAACCATTACCTATTCCGGATCAAGTTTGGGAGGATATCTCCATGGACTTTGTGGATGGACTACCTCGTTCGAATGGTCATACAACAATTATGGTAGTGGTTGATCGGTTGACAAATTCAGCTCATTTGGTTCCCTTGGCTCACCCCTATACGGCTAAGGTCGTCGCAGCTAAATTTGTTGATTATATTGTCAAATTACACGGTATGCCCCGGTCAATTGTCAGTGACCGCGATCCCATTTTTGTGAGCTTGTTTTGGAAAGAGTTTTGGAAATTGGCAGGTACAAAGTTGCGGATGTCTTCCGCCTATCATCCACAGACGGATGGTCAAACAGAGGTGGTTAATCGGTGTATCGAGCAGTTTTTACGTTGTTTTGTTCAGAACCGCCCTACACAATGGAGTTCTCTTCTTCCTTGGGCCGAGTTTTGGTATAATACTTCGTATCATTCGTCGACGGGTACTACTCCTTTCCAAGCTCTATATGGTCGGCCACCGCCTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

179

Start:

1351004  

End:

1351182

Strand:

+

>scaffold_1_LTR-Gypsy_6

CTCCAGCCGTATCGGCAGCGGTCAGTGTTACGCCGGACGTCGCAGAAGCTTGCACATAAATATTTTGGACCCTTTCAGGTCGAGGAACGGGTTGGTGAAGTGGCTTATCGTCTCAAGTTACCTTCCGGGTCCCGAATACATCCAGTCTTTCATGTTTCTCTACTTAAGCCGCATGTGGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

582

Start:

4568476  

End:

4569057

Strand:

-

>scaffold_1_LTR-Gypsy_7

ACCTGTTGGTTCTGTCCCAATACCTTTTTCAATTGAGAGACATGAAAGACAGAATGAATCTTTGATTCTTCTGGAAGTTGCAATCTATATGCTGCCTTCCCAATCTGTTCCATCACCTCATACGGACCATAGTACTTGGCTGCCAACTTCTGACAAGCTCGCTTTGCAACTGATTGTTGCCTGTACGGTCTCAATTTCAGAAAAACCCAATCACCAACTTCATATGCAATATCTCTGCGATGTTTATCAGCATTGTTTTTCATCAATTGTTGTGCATGAATCAAGTGCTTCTTAATCTGATCTAACATTGAATCCCTTTCCTTCAGCATCACTTCTAATTCTGAAACTTTTGTGGAATGTGCTTCAAAACGCAGTATGGAAGGAGGATCTCGACCATATAAAACTTTGAATGGTGTAGTCTTCAATGCCGTATGATATGATGAATTGTACCATAATTCTGCCCAAGACAAATACTGATGCCATGTCTTAGGATGAGTGGAAGCAAAACACCGTAAATACGTCTCCAAACATCTATTCAACACCTCCGTTTGCCCATCTGTTTGGGGTTGAAAAGCTGTGCTA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

171

Start:

4569161  

End:

4569331

Strand:

-

>scaffold_1_LTR-Gypsy_8

CCAAAACGCACTTAAGAATGTGTTGCCTCTGTCTGAAACTATAGAAGCTGGAAATCCATGTAACTTCACCACCTCTTTAATGAATAACCGCGCTACATCAGAAGCTGAGAAGGGATGTTTAAGACTTAAGAAATGACTGTATTTACTCAGCCTATCCACTATCACCAATAT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1626

Start:

4569459  

End:

4571084

Strand:

-

>scaffold_1_LTR-Gypsy_9

TGGCAACGGCTGCAATAAACCGGCTGGAGACAGTGTAGAATACTTATGTCTTTGGCAAACATCACACTCCGAGACAAACTTTTGAACATCTTTCATCAAACCATCCCAATGAAAAGACTGTTGTAATCTCTTAACAGTTTTTAACACACCTGAATGGCCTCCTAACAACCCGGTATGATATTCCTCCAATATCATTGGAATGAACTTTGAAGTTTTTGGTAAGACTAATCTGTTCTTGAACCATAATCTTCCATTTCTCACTTCATACCCATTGTCCTTGTTTTGATTTGCTATACAAGACTGAATATTATTCTGGATACCTTCATCCTTCTCAATCTCTTCATAAATGTCATGAAGCTGCAACACAGTTGGTACTGTCAATGCCATCAAAACAGAGGCTTGTATTACTCCCAGGGGTTGTATCTTCCGAGATAGACCATCAGCTGCAGTATTTTCCACTCCAGGCTTATATATGATTTCAAAATCATAATTCAACAGCTTGATTAACCACTTTTGATAGTCCATTGTCACCTCTCGCTGATCTAAAAGGAATTTTAAACTTTTTTGATCTGTATGAACCACAAAATGCCTTCCAAACAAATAATGTTTCCACTTTTGTATAGAAAGCACTATAGCCATCAATTCCCTTTCATATACTGGTTTTAGCTGCTCCTTAGCAGTTAAACCATGGCTAAAAAATGCAATAGGTCTTCTATTCTGCATTAAAACTGCGCCTAACCCATATCCTGAGGCGTCTGCTTCCACTGTAAAAACTTCAGCAAAATCTGGTAAAGACAAAACCGGGGCAGTAGACATTGCCTTCTTCAAGTTATCGAATGCTACTTGTGCTGTATTATTCCATTCAAAGCTGTCCTTTCTCAGTAGCTCTGTTAATGGTCTTGCTAAAACTCCATATCCTTTAATGAACCTTCTATAGTACCCAGTCAGACCCAAGAATCCTCTCAATTCCTTCACTGACTTAGGGGTCAACCATTCAGTCATTGCCTTTGTTTTTGCTGGATCAGTAGATACCCCATCACTAGAAATGATATGTCCCAGATAATCCACTTGTTTTTGACCAAACATGCATTTCTTTTTGTTGGCAAATAGCTGATTCTCTTCCAATATTTTCATCACTATTTCCAAATGTTCAATATGTTGTTCCATAGACGAGCTATAGATCAAAATATCGTCAAAAAATACCAAGATGAATCTCCTTAAAAATGGCCTAAACAACTCATTCATGAGTGCTTGAAACGTCGTTGGAGCGTTTGTTAACCCAAACGGCATGACGAGAAACTCGTAGTGTCCATCATGAGTCCTAAAGGCTGTTTTGGCCACATCTTCTTCTCGCATCCTTATCTGATGATAACCTGCTCTAAGGTCCAATTTTGAAAACCAAACTGAGCCATTCAACTCATCCAAGAGTTGGTCAATCATTGGTATCGGAAACTTATCTGGTACTGTCACTCTATTCAATGCTCTGTAGTCAACACAAAAACGCCAACTATTGTCTTTCTTTTTAACTAAAAGCACTGGACTTGAGAATGGACTGTGACTTGGTCTTATAATTCCGGAATCCAACATCTCCTTGACCATCTTCTCTATGATCTCTTTCTGGGCGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

572

Start:

4571463  

End:

4572034

Strand:

-

>scaffold_1_LTR-Gypsy_10

TATAAAAATGACATCTCATTTTTCTGCCAGTTCACCTTACAGTCTCCCAATGTGCTCAGCCAGTAAACTCCCAAAATAATGTCAATCTGACCTAACTCCAACACCACAAAGTCTGTAGTGAATTCCAAATCTTGAACTGAAAATTTTACTTTCTCACAAACTCCCATTCCTTGGACTGTAATCCCTGTACCCAGCCTCACATTAAGGTTAGGATCGTCTCTACATTTCAATTTCAGTTTTGTAACCGCTGCTGGAGATATAAAATTGTGGGTTGCCCCACTGTCCAACATTATAATCACACTAGCAGTCCCAACCATACCTCTCACTTTAGTGGTTGATGGAGAAGAAATCCCTCTAAATGATGAGAATGATAGTGCCATGCACTCACCAGCAACTTCTTCTACTAACTCCTCGTCACTATTCCCATTCAATACTTCAACCTCATAGCCATTAAAGACAGTCAACACCCTTAATTCTTTGTTTGGACATTTATGATCTTTGTTCCAAGGACCATCACACTTAAAGCATATTCTTCTTCTTCGCTTTTCATCTAATTCAGCATTAGAGTTGTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

337

Start:

4572257  

End:

4572593

Strand:

-

>scaffold_1_LTR-Gypsy_11

TGGCAAATTCCTTGGTTTCTGCATATGAACTAACTCTTGCATCTCCTGAGTTAACCCATTCAAAAAAATGCCCTCTAATTTCTGATCATCCAACCCAGTTACTTGGGAAGATAAGTCTTCAAACCTCTGCACATAATCAGCTATAGATCCCGTTTGCTTAATGCAAAACAAACTTTGGCTTGGACCTCTAATCTTCAAGTTCCCAAAGCGTAACAGCAAACTTGTCTTAAACTGACTCCAAGTCTCAAAATCTTTTCTGTTTACTTCCCAATTGTACCAGCTCAAAGCTTCTCCTTGTAAACTCACTGATACCAAAGCTAATTTCTCAGCATCATTA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

171

Start:

5244290  

End:

5244460

Strand:

-

>scaffold_1_LTR-Gypsy_12

GGCAAATCTTCTCTTAATCTTTTTATGAAACCAAATTTAAGGTCATGTGTTCTTGGTGAAAATTTAAAAATATCTTACCCTTTTACATTTCTTGCATAATAAAACTCAATGAGCTATTTCATTTTCAGTTTTACATTCCTATCTTTTTATAAGCTCTTGATGAGCATGAAT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

358

Start:

6914811  

End:

6915168

Strand:

-

>scaffold_1_LTR-Gypsy_13

TAGACAAGTCAATAATGCGAAACAGATTACTTGAATTCCAAACGAGGTTCTAGTACAAACGACAAGTTCGCTAATAAGCTATTACATCGTTTTCAACACTAGACCGAATTATTAAAACTACCCCAATCCACCATCCTTCCCTTTCCTTGCCTTCGTCTCACGAGCTGGTTCAGCCACAAGAATTACTTCCATTTCCTGCATCCAAAAGGAGGCGTAAGCAAACGAATTTGCTTAGTGGAGCGGTCGTCCCGTCACACTTGGCACAGTCAAGAAATCACATTCATTTCGATCGATTCAAGGAGTTAAACAAGCAAGCCATAAACATAACATACCGTCGAGATAATTATCGGAACCACCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

382

Start:

6915203  

End:

6915584

Strand:

-

>scaffold_1_LTR-Gypsy_14

ATAAACCATGACAAGCAAGAAAACATCAATGAATCAATCAATAAAAACGACCCAAGACTCGGCCACGGTCACGCTCTCACCTTTCTCACACGGATTCACTTTCTGACACCTCTAGTCGCTTACTCGTCCGATCGGATCCAATAAACTCTCGCAAAGCACCCGGATCTACACCATGAGCACAGATCTAACTCTTTTACCGACAATACTCGAAGAACAATCGATAAACACCAAGTTTACACGATACTTACCAAGATTCTCGAGAATTACTCGATCTACTCTCGATCTTTCTCACGGATTCTCGACAAACACCTAACTTTCTCGATGAAAAGGTTGCCGATCGCCTTTAGGGTTCTTACGCGTGAAAACGCTAACAAATGGTCGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

4268

Start:

6916062  

End:

6920329

Strand:

-

>scaffold_1_LTR-Gypsy_15

TCTCCCCCACTTAGAATAGATTCGTCCTCGAATCTAAACTTTCTCTTTCGAGACTTCTCGCTTCTCAAACCATTTCTTGAAATTCACCCTCATTACTTCCTCCGGTTCCCAAGTAGTCTCTTCTTCTCCGTCACAATCCCACACAACTTGAATCAACTTAACCTTTTTCTTTCTTCCAGCTCTTGACTTCCTCCCAATAATTCGAACTGGTCTTCCAACAATAGTCATATTCGCTTGCAAGTCCGCTGGAAGCTCCGTTGAGACATTCTCTCGAGGTGTTATGCATTTCCTTAGCATAGACACATGAAACACTTTGTGAAATGCTTTCATTGCCGGAGGCAATTCAAGTCGATAGGCCACTGCTCCAATTCTTTCCAGAATTCGGTACGGTCCCATGTACCTCGGAGTTAACTTTGTGTTCAAGGCTGCACGGTCTTTACCCTTATAAGTAACCGTCTTAAGGTAAACCATGTCTCCCACCTGAAATTCCAACTCTCGCCGACGCTTATCGGCATAACTCTTTGTCTATCTTGAGCTTCTTTCATTTTAGCCTTCAACACTTTGATCTTCTCGGTCGTTTCTTGCACAAAGTCCCGACCATAGACACTTCGCTCCCCCACTTGTGTCCAACACAGCGGTGTTCGACAAGGCCTACCATACAACGCTTCATATGGTGACATTCCAATACTCACTTGATAACTATTGTTATAAGTAAACTCCGCCAAATGCAAGTAACTCGTCCAATCTCCACCCCAATCCAGAACACTCGCTCTCAACAAATCCTCAAGTGTTTGGATTGTTCTCTCGGACTGCCCGTCCGTTTGTGGATGATGAGCCGTGCTCATGTTCAATCTTGTACCAAATTGATTTTGAAGAGCTTTCCAAAACCCAACAGTAAACTTAGAGTCACGATCCGATACTATACTCGCCGGCACTCCATGATACCGAACGATATTCTCCACGTAAAGCTTTGCAAGCTTCTCGGTTCCATCTGTCTTATTCATCGGCAGAAAATGTGCGGACTTCGTTAATCGATCGACAATAACCCAAATAGAATCTTTCTCCTCGCACATAGGCAATCCGGTAACAAAATCCATGGTTATCATATCCCATTTCCACTCGGGAATTGGTAAACTTTGCAACAGTCCTCCTGGAACTTGATGTTCAGCTTTAACTCTTTGACAAGTCGAACAAGAAGCAACCCATCTAGCAACATCCTCTTTCATCCCTCGCCAATGATAATATCTCTTCAAGTCTCGATACATTTTTGTTGATCCCGGATGTATCGAAAACTTAGACTGATGTGCTTCCTTAAGAATTTCTTCTCGAAGTTCCTTATCCTTCGGAACGCACACACGGCCCTTTACCAATATCGTCCCATTGCTCGAAGTCTGGTACTCGGTCTTATCATTCTTCGATAACTTAATGAGTTCCTCATCTTTTTCTTGTGCTATCCGAACACGAGTCAATAAATCGGCTTGATCCGCGGCACCCAAACCCAAAGGCTCTAACTCTTCCGATATCGCTTCCAAGCGTAAGGTACCAACCATGTCAACCAAACTTTCCATCTCCTTCTCAGTACTTGAAACAACTCTTTTCCGGCTTAATGCATCGGCTACAAGGTTTGCTTTACCCGGATGATATTCGATATCGACATCGTAGTCGGCCACTAACTCCATCCATCTTCGCTGCCGCAAGTTCAATTCCGGTTGGGTGAAAATATACTTGAGACTTTTGTGGTCCGTGAAAACTTGAACTTTCCCACCGTAAAGGTAAGAACGCCAAATTTTCAAACCAAACACGACCGCCGCCATTTCCAAGTCGTGAGTGGGGTAATTCGCTTCGTGCTTCCTGAGCTGCCGAGAGGCATAAGCGATTACCTTACCATGCTGCATTAAGACACATCCAAGTCCCATCCTTGATGCATCTGTATAGACCACATAAGGTTTATCCGGTTCCGGCAATGCCAATACCGGTGTACTTGTAAGCATCTTCTTAAGCTCCGAGAAACTCTTCTCACAATCTGTCGACCACACGAATGGTACATCTTTCCCCGTTAACTTTGTCAATGGATGCGCCATGCTTGAAAATCCCTTAACAAAACGTCGGTAATACCCAGCCAAACCAAGAAAACTTCTTATCTCCGATGCATTTTGAGGTTTCGGCCAATCCGCAATTGACTTGATCTTCTCATGATCGACGGACACTCCTTTATCCGACACCACATGCCCCAAAAATCCAATTTCTCTTTGCCAAAAGCTACACTTACTTAGCTTGGCGAACAAATTATGTTCTCTTAGCTTACACAACACCTTCCTCAGATGCACGCCGTGCTCTTCCGGATTCTTCGAATAAACTAGAATGTCATCAATAAAGATGATAACAAACTCGTCCAAGTATTCCCGGAATACATTGTTCATGAGCTTCATGAAAGCTGCGGGAGCATTAGTCAGCCCGAAAGGCATGACAACGAATTCGTAATGCCCGTACCTTGTCCGAAAGGCCGTCTTACTGATATCCGACTCATCGATCGGAATTTGATGATAGCCCGAGGCTAGATCAATCTTCGAGAAACAAGTAGCACCTCTAAGTTGGTCCAACAACTCGTCGATCCTCGGAAGAGGGTACTTATTCTTCACCGTCACTCTATTCAGGCCGCGGTAGTCGATACAAAGTCTGAAACTTCCATCTTTCTTATTTACAAAGAGAACCGGTGCACCCCAAGGTGAACTGCTTGGTCTCACAAATCCTTTGTCCATTAGCTCACTAAGCTGCTTCTTCAATTCGGCCATTTCCGCCGGAGCCATCCGATATGGTGACTTAGAGATTGGAGCTGTTCCCGGCTCAAGTTGAATCGTGAACGGATCCGAACGTGTCGGTGGCAAACCAGACAACGCTCCGAACACGTCTTTGAAATTTTGCACCACCGGAATATCCTTAACTTCTTGCTCGGTTCCCACTTGCACCGTAGAGATTGTCGCCAGGTACGCTTCATACCCTTTCTGAATCATATGCTCCGCTTGAACTGCAGAAACAATCAAACTTCCGGACGATGGTTTGATTCCCCGATACACCAGTAAACCTTTAGGCGTCTCGAATACAACACGTCCACGGCGACAGTCCAAATGTGCCGAATATTTGCCGAGCCAGTCCATTCCCATGATTACATCATGATCATCTATGCGGCAAATCACCAAGTCCGTGGGCATATCAACTCCACAAATCATCACGGAGATGTTCCGGACCTTTCCATAGGTCATCATCCTTTGTCCACCGGCTGCTTTAACAAGACCAAAGTCTTGTCCGGGTTCCTTTTGAAACCCACCTTTACCAATCATTTCCGGGGACACGAAGCAACGTGAAGCCCCGGAATCAAACAATACATGGGTTTCCACACCACTCATGAGAATGGTCCCTACACATTTACCTAAAATGCTAAGAACCCAACCCGACAAGCAACAGGCAAGTTACCAAAAACATTTGCTAAGGTAAGTGACAAGACTTACCCGTGATCGGACGTGAAGTGCTTGCCTCATTCACATACTCGTCGGACACCGAGTAAACCCTTGGCATGATTGCTGGCCTCTTAGGCGGTGGTGGCAACGCCTCACTTGGCCGCTTCCCAGCTAGCTGCATAAGCTTCGGACAATTAGGCCTCAAATGACCAGCTTCACCACAATTGAAACATGACCGCGTATCCGGCTGTCGATCCCTTTCCGGACACTCGCTGATCCGATGATCCTTGCTACCACAACGGAGACATTGTCCCGAAAGGAGCCTGCACGTACCAGAATGCATCTTCTTGCAAGTCGGACACACTCGGTTCTGTCCCGATGACTTTCCTTGGAAATTCGTTTTCCCCCAATTCTTCTTCTGTCCGCCACCTTGGTCAGATTTGCTTTGCGGAGCAGGTTGAGTTGACACTTGAGAATTCGACAGCTTTGCCTTCTCCTCAAGGCGAGCTTCAAGCAATGCTGCCTTTTCCACCAACTCGGATAGAGTCGCATAATCCCGGATGCTACAACCGATCTGGAGATCAACATCCAACGCACGCATGAATCGGCGAATCTGGGCTTGCTCGTCATCCATGTCTCGGCCACCAAACTTCTTAAGCCGGTCAAACTCCACTTGCAATTCCCTCACCGTCATTGATCCTTGACGGAAGTCCAAAAACTCCGACTCAAGCTTGTTGCGAGCTTCTTGCGGAAAATACTTAGCGTGAAACAAATCACGAAAAGTTTCCCACGTACAGTTCGGATTCGCCATCC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

319

Start:

6920430  

End:

6920748

Strand:

-

>scaffold_1_LTR-Gypsy_16

ACCAAGTATCCGCCTCCTCAGCAAGGTAGTGTGTAGCAATGTCCTTCCGATACGCAATCGGACATCGAACAGAGTTGAAGTTTCTCTCCAACCGAGTCCTCCATTCAACCGCCTTGATAGGGTCAGCACCACCGGAGAAGTAACTCGTCCCCAACTTCATCATGTGATCCATCACAGTCAAGTACGATGGATTATTCTCCTGACCCACTGGTGGTGCGTTCCCAACTGGTGGATTCTCCGCCGGCTGTGGAGCTAATCTTTCCAAGATTTGCGCCAACACGCCCAACACTTGCCCCATTTCGGGAGGAACAGCACCCGC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

170

Start:

6920886  

End:

6921055

Strand:

-

>scaffold_1_LTR-Gypsy_17

CCATCTGCAAATACCGGATTCGATACTAAGTTAGTCTATTACTAACTTAGTTTCTAATTACAGAAAAATAACCAGTCTTACCGTGAGACATCAGGCTTCGGAAGGATGGATTTACATACTAACCCGTTTACACTAAGACTGTCCTAGAATCGACCATGCTCTGATACCAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

358

Start:

6921145  

End:

6921502

Strand:

-

>scaffold_1_LTR-Gypsy_18

TAGACAAGTCAATAATGCGAAACAGATTACTTGAATTCCAAACGAGGTTCTAGTACAAACGGCAAGTTCGCTAATAAGCTATTACATCGTTTTCAACACTAGACCGAATTATTAAAACTACCCCAATCCACCATCCTTCCCTTTCCTTGCCTTCGTCTCACGAGCTGGTTCAGCCACAAGAATTACTTCCATTTCCTGCATCCAAAAGGAGGCGTAAGCAAACGAATTTGCTTAGTGGAGCGGTCGTCCCGTCACACTTGGCACAGTCAAGAAATCACATTCATTTCGATCGATTCAAGGAGTTAAACAAGCAAGCCATAAACATAACATACCGTCGAGATAATTATCGGAACCACCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

382

Start:

6921537  

End:

6921918

Strand:

-

>scaffold_1_LTR-Gypsy_19

ATAAACCATGACAAGCAAGAAAACATCAATGAATCAATCAATAAAAACGACCCAAGACTCGGCCACGGTCACGCTCTCACCTTTCTCACACGGATTCACTTTCTGACACCTCTTGTCGCTTACTCGTCCGATCGGATCCAATAAACTCTCGCAAAGCACCCGGATCTACAGCATGAGCACAGATCTAACTCTTTTACCGACAATACTCGAAGAACAATCGATAAACACCAAGTTTACACGATACTTACCAAGATTCTCGAGAATTACTCGATCTACTCTCGATCTTTCTCACGGATTCTCGACAAACACCTAACTTTCTCGATGAAAAGGTTGTCGATCGCCTTTAGGGTTCTTACGCGTGAAAACGCTAACAAATGGTCGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Gypsy_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

89

Start:

8097312  

End:

8097400

Strand:

-

>scaffold_1_LTR-Gypsy_20

GTGATCCATTTGCCTCATTAAAAACCATGCTGAGAAAACCCATTGGGACAAAACTCAGTCATGGGAAAAAGAGTACAAATTTCGCACCT