ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Copia_1 RetrotransposonsLTRLTR-Copia132223452223583+
scaffold_1_LTR-Copia_2 RetrotransposonsLTRLTR-Copia943223571224513+
scaffold_1_LTR-Copia_3 RetrotransposonsLTRLTR-Copia3532224527228058+
scaffold_1_LTR-Copia_4 RetrotransposonsLTRLTR-Copia119228061228179+
scaffold_1_LTR-Copia_5 RetrotransposonsLTRLTR-Copia237449758449994-
scaffold_1_LTR-Copia_6 RetrotransposonsLTRLTR-Copia272611066611337+
scaffold_1_LTR-Copia_7 RetrotransposonsLTRLTR-Copia4112611396615507+
scaffold_1_LTR-Copia_8 RetrotransposonsLTRLTR-Copia272615508615779+
scaffold_1_LTR-Copia_9 RetrotransposonsLTRLTR-Copia233991434991666-
scaffold_1_LTR-Copia_10 RetrotransposonsLTRLTR-Copia4229991667995895-
scaffold_1_LTR-Copia_11 RetrotransposonsLTRLTR-Copia266995878996143-
scaffold_1_LTR-Copia_12 RetrotransposonsLTRLTR-Copia64412321651232808+
scaffold_1_LTR-Copia_13 RetrotransposonsLTRLTR-Copia15212760201276171-
scaffold_1_LTR-Copia_14 RetrotransposonsLTRLTR-Copia454412762391280782-
scaffold_1_LTR-Copia_15 RetrotransposonsLTRLTR-Copia15212808021280953-
scaffold_1_LTR-Copia_16 RetrotransposonsLTRLTR-Copia15619560801956235-
scaffold_1_LTR-Copia_17 RetrotransposonsLTRLTR-Copia430319562411960543-
scaffold_1_LTR-Copia_18 RetrotransposonsLTRLTR-Copia16419609151961078-
scaffold_1_LTR-Copia_19 RetrotransposonsLTRLTR-Copia8824317012431788-
scaffold_1_LTR-Copia_20 RetrotransposonsLTRLTR-Copia13349196124919744-

< 1 2 3 4 5 > Total 176


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

132

Start:

223452  

End:

223583

Strand:

+

>scaffold_1_LTR-Copia_1

TATAAGATAAATATGTAAAGGATACATTAGTCAATAGTTATTACCTAGTCTCATTTTGTATCATGTATATATATTGTACTCTCTTCATCTAATAGAATCATTCAGCCTCCTAATCTATATGGTATCAGAGCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

943

Start:

223571  

End:

224513

Strand:

+

>scaffold_1_LTR-Copia_2

TGGTATCAGAGCATTTCGATACCTAAAACCTAAAATTTTTTTTTTTTTTTCATCGCCGCCTCCTTCTTCTCCTTCTTCGTGAGACATGTCTACATCCTCTGGTGAAACTATTACTATCTCTGATTCACAACACATTGTCTCTGTCAACATGACAAACGTCACGAAGCTCACCGGCACCAACTTTCTCATGTGGAGTCGACAGGTCAAGGCTCTCCTCGATGGCTACGATCTCACAGGTTACGTGGACAACACGGCTGTTGTCCCGCCTCTTACCACAACAACGGCTGGCGTCACTACTCCCAACCAGGAATACAAGATCTGGAATCGTCAAGACCGTCTCCTCTATAGTGCACTTTTGGGTGCTATCTCGATCTCGGTCCAGCCATTGCTCTCAAACACCAACACATCGGCTGAGATTTGGGAGACACTTACTGCCATTTATGCTAATCCAAGCCGCTCTCATATTCAACAAGTGAAACAACAGATCACGGCATGGACCAAAGGTGAAAAATCGGTGGAAGAATACTTTCACGGCCTCACTACACGTTTCGATGTCTTAGCGCATCTTGGTAAACCTATGGAGCCGGAGGATCAAATTGAGAAAATTTTGGGAGGTCTTCCCGAGGACTACAGACGTGTTGTTGAGCAAATTGAGAGTCGTGATCGTTGTCCTTCGCTGCCCGAGGTCCTCGAAAAGCTTCGCAACCATGAAAACAAGCTGAAGACTGTCATTGCCTCATCTTCGTCTCTTCCCGTGTCCGCAAATGCGGTTCAATATCGCGGCAAGAGCAACAACGGTGGTTCATCTCGTTCTCAGGGTCGTGGTAACAACAACAGCGGTTATCAACAGCAATGGCAGCCACAACAACAGTTCCAGCCGCGTCCAAGCTCTTCCTCTTCTTACGGTCGTGGCTATCAAGGGAAATGTCAGCTGTGTGGGGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

3532

Start:

224527  

End:

228058

Strand:

+

>scaffold_1_LTR-Copia_3

CCTCTTCTTACGGTCGTGGCTATCAAGGGAAATGTCAGCTGTGTGGGGTTCATGGGCATAGTGCCCGTCGTTGCTCGCAGTTGCAGCTTGCTGGGGCTCAGTTCACCAACTCCGCTCCGTCTTCCTTAGCGCCGGTTCCGTGGCAGCCACGTGCGAATATGGCTGCAACGACAACTCCGGTTGGGCCAAATCCTTGGCTGATGGATACGGGTGCTACTCATCACCTCACGACAGATCTCAGCAACCTCTCTCTTCATCAACTCTATAATGGTGGAGAGGAAGTTACCATTGCTGATGGCTCCGGGCTTAACATCTCGCATACGGGTTCCACTTTTCTCTCTACACCAACTAAAAACCTTTTGTTAAATGATGTGCTTTATGTCCCTAATGTTGCCAAAAACCTTATATCTGTTTACCGTTTGTGCAATGCTAATCAAGTGTCTGTGGAATTTTTCCCTGCCCATTTTCAGGTGAAGGATCTCAGAACGGGGGTCCGGTTACTCCAAGGGAGAACTAAGAAAGAGCTGTACGAGTGGCCTGTATCACCCCAAACACCTATCACTTCTATGTTTGCTTCTCCATCACCAAAAGCTTCTCTTATCTCATGGCACTCGAGACTAGGCCATCCGTCTCCATCTATTTTAAATTCCATCGTTTCGCAATTTGCTTTACCATGTTCTGATTCTTCAAATAAACACTCTTCTTGTTCTCATTGTCTTATCAATAAAAGCCATAAACTTCCATTTTATACAAACACCATTACTTCCACAAAACCACTCCAATATCTCTATTCCGATGTCTGGATGTCTCCTCTAATTTCGAGTGATAACTTCAAATATTATTTGGTGATTGTTGATCACTTTACAAGATACACTTGGATGTATCCCTTGCAGCTGAAGTCTCAAGTGAAGGAAACGTTCATCACGTTTAAATCATTAGTGGAGAATCGTTTTCAACATAAGATTGGGACGTTGTATACGGATAATGGGGGTGAGTTTGTGGCGTTGAAACAATTTCTATCTACTCACGGAATTTCTCATCTTACCTCACCTCCCCACACACCGGAGCATAACGGAATTTCTGAACGCAAGCATCGGCATATCGTGGAAACGGGTCTCACACTCTTACATCAAGCGACGGTACCGAAAAAGTATTGGCCTTATGCTTTCGCCACTGCCGTGTATCTAATCAATAGAATGCCTACTCCGGTGCTTGGTAACTCGTCGCCGTACTTAAAGCTGTTTCAACAACAACCAAACTATCTCAAGCTAAGAGTGTTCGGCAGCTTGTGTTTTCCGTGGCTCCGACCGTATACCACCCACAAGCTTCAAGATCGATCGATGCCGTGTGTTTTTATGGGCTATTCGTTGACTCAAAGTGCCTATTTATGTCTTGATGTCACTTCGGGTCGCATCTACACGTCGAGACATGTGCAATTTGTCGAGTCTAGCTTCCCGTTTGCTTCATTACAACAACAATTCACCACACAAGCTCGAACACAACCAGACATCACTTCGCCGATTTCGGATTCCAGACCTCACTTTGTTCCTATTCGCCCTCTGCCACTCGTACAAGCTCAGCAAACAACGCCCCCGGTCTCCGTTCTTCACCCCTCGTCGTCTGAGTCACGTTCAACACCGGTTTTGTCTCATGACAATACGATTGAACGTGATGATGAAGATAATAGACATTTGGGCCGCGAAAGTTTCACAGGCCCACTAAGAGATTCTCGTGCACAAACAAGCCCATCACTCTCCCCAACCGTGTCCACTTCCTCCGACAATAATAATCCTCCGTCACCGCCTGAACGTGACCTCAACCCTGAACCGCCACAAATTCAACCATTACCGCCTCCACCTGCTCAACCTGCTCCACCTCCTCACCCAGCTCAACCACCCGTAAACACTCACCCAATGCAAACCCGCAGGAAAAATAACATTGTCAAACCAAACACCAAAGTGAGTCTCTCTGCCATCACTTCCAAACCAACCATACCCACAACCATCACCCAAGCTATGCGAGATGAAAAGTGGCGTCATGCAATGGCCGATGAACTCAATGCACAGCTCCAAAATCATACGTTTGATATGGTTCCTCCAACACCGGGTCAAAATGTTATACCCACCAAGTGGATTTATACGCTTAAGTACTTACCCAATGGCTCTCTTGACAGGTACAAAGCTCGGCTGGTAGCACGGGGGTTCAACCAACAATATGGTCTTGATTACCAAGAGACGTTCAGTCCCGTGGTTAAGTCCGTTACCATACGAACCGTGTTACAACTCTCCGTGAATAAATCTTGGGGGATAAAACAGCTTGACGTGAATAACGCATTTCTGCATGGAACACTTAAGGAAGAGGTCTTTGTCACACAGCCACCGGGTTTCATCGATAAAGACCATCCTCATTACGTTTGCCGTCTCAATAAAGCTCTTTATGGTCTCAAGCAAGCTCCTCGAGCATGGTACCAAGAACTAAAGACCTATCTACTTCGGATGGGTTTTCATAACTCGCTTGCGGATACTTCGGTTTTTATTTATATACATGGTACGGATATCATCTATACTTTGGTGTATGTCGATGATATAATTGTCACTGGCAGCAGTACCGCTCTCATTGATGGGTTCATTGCTGCTCTCGCGCGTCGCTTCTCTTTGAAGGAGCCAACGGATCTTCGGTATTTTCTTGGTGTCGAAGCTACTCGCACTCCGCACGGCCTGCATCTCATGCAACGGAAGTACATTGTTGATCTTCTCACCAAGACAAATATGTTGAATGCCAAACCGGTCTCTACACCTCTCTCGCCATCACCGGTTTTAACTCTCACCTCCGGGAACGCTTATGACAAGCCCTCTGAGTATCGTATGGTGGTTAGTAGTCTTCAGTACTTGTCACTAACCCGACCAGACATTGCATTCGCCGTGAACCGCTTATCTCAGTTTATGCATGCTCCCACTGACATTCATTGGCAAGCTGCTAAGCGTGTACTCCGTTATCTTGCCGGGACAGCTTCTCATGGTATTTTTCTTCGCTCTAAGACACCTCTCACTCTCCATGCCTTTTCAGATGCGACATGGGGCGGTGACAGTGTAGATATGATCTCCACAAATGCCTATGTTATCTATCTCGGCTCCTCTCCGATTGCTTGGTCGTCTCGGAAGCAAAAAGGTGTCTCACGCTCAGCCACAGAATCAGAGTACCGAGCTGTTGCAAATGCAACATCGGAACTCATCTGGATTTGCTCACTCCTCTCAGAACTTGGAGTGAAGTTACCCATGGCACCAGTTGTATATTGTGATAACGTCGGGGCGACATATTTGTGTGCAAATCCAGTTTTTCATTCGCGTATGAAACATATTGCCCTCGACTATCATTTCGTACGTGAGCGAGTGCAGTCCGGATCATTAAGGGTGGTTCATGTCTCAGGGGAGGACCAACTCGTAGACGCTCTTACTAAACCACTAAATCGCCCGCGGTTCAAAGGACTGTTCAACAAGATTGGAGTGTCTCCAGCCCCTCCATCTTGAGGGGG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

119

Start:

228061  

End:

228179

Strand:

+

>scaffold_1_LTR-Copia_4

TATAAGATAAATATGTAAAGGATACATTAGTCAATAGTTATTACCTAGTCTCATTTTGTATCATGTATATATATTGTACTCTCTTCATCTAATAGAATCATTCAGCCTCCTAATCTATA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

237

Start:

449758  

End:

449994

Strand:

-

>scaffold_1_LTR-Copia_5

TCTAGAATATAGAAATAAAGACTTGAGATTTATAAAAGCACTTCTTTTATTAGCTTTGAAAACTTACTCAAAAACAAAAGCTTCTCAAACTCTCTCTCTAATCTCTTAAAGTTAACCACATATTGGTAACTCATATATATAGAGAAGAAGCAAAAACTTTTCTTAATAAGACTTGTATCTAGATAACACCTAAACACCAACTATTCCTAATCCTAACTTGCTTCTTAAGCTTTCTTC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

272

Start:

611066  

End:

611337

Strand:

+

>scaffold_1_LTR-Copia_6

TGTTGAGTTAAGCTTGAAGACTTAACTTGGAGAAGAAGCTATCCTAATCCTAAACCGAGCAATGGTTTAGTTAGAGATAATGATCATATACTTTAGGAGTTATCTAAGTATATGTATTTCTAATAGGATTAGGAATAGGTTTCTTATATAAATATAGATGTCGAGGCATGACATTAAGTGTGAGACATTGAGAGATTGAGAGCTTAAGTTTTGAGATATTTTCTTAAGCAATAAAGAGAGTAATTCTTTATAATCTTTCAAGTGTTTCTTAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4112

Start:

611396  

End:

615507

Strand:

+

>scaffold_1_LTR-Copia_7

CATGGCCGATATTGTTGTTTCCGACCCAAAACCAAAGACAAGTGGAAGCTCTTCTATCGCATGTCCTATGCTCACATCCGTGAACTATACAGTATGGGCCATACGCATGAAGATTACACTTCAGGTTCATAAGGTTTGGGAGGCAATTGACCCCGTCACAGAAGCGATTGATCCCGAGAAGAACACCATGGCCATAGCTTTGTTGTTTCAATCCATCCCCGAAACACTTGTTCTTCAGTTTGGTACCCTAGATACAGCAAAGAAGGTGTGGGATGCGATCAACACACGACATATGGGTGCAGATAGAGTTAAAGACGCTAGACTCCAAACATTGTTGTCTGAGTTTGACAAACTCACGATGAAAGACTCCGAGAAGATCGACGACTTTGCAGGAAGGATTGCTGAGATTTCTTCCAAGGCTGCGGCTCTAGGAGAAACCATGGCAGAGCCTAAACTTGTTAAGAAATTTCTGAAAAGTCTTCCCCGGCGAAAGTATATTCACATAGTCGCTACACTTGAGCAAGTGTTTGATCTTAATACAATGTCTTTTGACGAGGCTATCGGACGTCTGAAAACATATGAAGAACGCACCTTTGAGGAAGACGATGGCCAAGACGATGGTGGAAAACTTATGTATACAAACACGGATGGCCAATCGAATCGGGATTATAATGGAGACACACGCGGAAGAGGCCGAGGTGGACGATACAGAGGTCGAGGACGAGGACAAGGAGGAGGAAGAGACACGTCCAAAATCACATGTTTTCGATGTGACAAACTTGGACACTACGCCTCGAGCTGTCCTGATCGACTACTTAAGTTACAAGAAGCAGAAGAAGCGGAGACTAATGATACACAAGACGCGGACGAGCTCATGCTACATGAAGTCGTTTATCTCAACGAGAAACATTGCATTCCCAGCAAGTATGAAACAAACATTGGTGATATTGGTGAAGAAAATCTTTGGTACCTCGACAATGGAGCTAGCAACCATATGACAGGAGATCGAAGGTATTTTGACAAAATTGATGACTCCATCACCGGGAAAGTACGATTTGGAGATGATTCATGCATTGCTATCAAGGGAAAAGGCACAATCTCGTTTATTGATATGAATGGTGAACCAAGAAAGATGACCAATGTGTATTTCATACCAGACTTAAAAAGCAACATCACTAGTCTTGGACAAGCCACAGAATCTGGGTGTGACATACGCATGAAAGGAGAACAACTAACTATGCATGACCGAGAAGGAAAACTACTTGTTAAGGCCGATAGATCAAAGAACCGGCTATACAAAGTAAGCATGAGGATTCGCAACATAGCTTCTTGTAATCTAACTACAATTTCGGATTCTAGCAGGTGGCATGCAAGATTGGGTCACATAAACTATGAGACAATCAAATCGATGATACAAAAGGAGTTAGTTCAGGGCATACCACGAGTTGTTGTCGAGAAGGAATTATGTGCATCTTGCTTACTTGGGAAACAAACAAGAAGAATGTTTCCTCAAGCTACTTCGTATAGAGCAAGTAGGATGCTTGAGCTAATTCACGGTGATCTTTGTGGCCCTATATCACCAAGCACAACTGCTGGAAATAGGTACATCTTTGTCCTCATAGACGATCATTCTCGGTATATGTGGACGAGCTTGTTGAAGGAAAAGAGTGAGGCTTTTGAAAAATTCAAAAGGTTTAGGCAACTTGTGGAACAAGAAACAGGACTTCACATACAAACTTTCAGGACAGATAGAGGAGGGGAGTTTGTATCACAAGAATTCATGTCTTTTTGTGAAAAAGAGGGTATAAACCGTCACCTCACTGCCCCATACACGCCTCAACAGAATGGAGTAGTCGAGCGACGCAATAGAACCCTAACGGAGATGTCTAGAAGCATCTTAAAACACATGCACATGTCGAATTACTTGTGGGGAGAAGCAGTTAGACACTCTACATACTTGCTAAACCGTATTGCAACAAGAGCACTCTCGGACAAGACACCGTATGAGGTCTTTAGATCTAAGAAGCCTAACATTGATCACCTTCGGATTTTTGGATGCATTGCATACGCAAAAGTGGAGAAGCCGCACCTAAAGAAGCTAGAAGATAGGACGCGTATGCTTATTCATTTAGGAACTGAGCCGGGCTCAAAAGCTTATAGATTACTTGATCCGCAAACAAAGAAGATAGTTGTAAGCCGAGATGTGATCTTTGACGAAACAAAAGGCTGGAATTGGAAGCTAAATACATCAGAAGAGGAGCATGGAGGAAGGTTTAGTTTTGGCTTTGAAGAGTTTGGCAATCGTGGTATACAAGAAACCGAGAATGAGAATGAAGAAATCGAACAAGTAGACAACAATCACGGAAATGATCATGTGTCGGATAATGGTCATGAGAGTGAAGAAGAACTTGATCATGAGGATTCCGAAGCTGGTGATCAGCCTATAGCTTTAAGAAAAGCTACAAGAGAAAGACAAAGACCACAATATCTTCAAGACTATGCACTACTTGCTGAGGAGGAAGGTGAGATACTTCTGATGTGTTTAAACAATGAACCTAGAAACTACCAAGAAGCTAAAGGAAAGAAAGAATGGATGCTTGCGTGCGAGGATGAGATTCATTCGATTGAGAAGAACCAAACTTGGGATCTTGTGGACTTACCAGATGGAGTTAAGCCAATTGGGTTAAAATGGGTCTTTAAACTCAAGACAAACGCCGATGGAAGCATCAACAAGTACAAAGCCCGACTCGTTGCAAAAGGGTATGTACAACAATACGGGATCGATTTTGAGGAAGTGTTTGCTCCGGTTGCTCGTCTTGAAACCATAAGATTGTTGGTTAACCTTGCGGCTGCAAATGGATGGGAGATACATCATCTCGATGTAAAAACTGCATTTCTCCATGGTGAGCTAAAAGAAACGGTCCATTTCTTGCAACCAGAAGGATTCGAAAAGAAGCAACTAGAAGGAAAGGTTTATAAACTTAAGAAGGCTTTGTATGGATTACGACAAGCACCAAGGGCTTGGAATCACAAATTGAATCAAATCCTCATGGAGCTTAAGTTTGTAAAGTGTTCAAAGGAACCATCTGTGTATCGCAAGGAAGTAATGCATGATTACCTCCTTATAGCCGTGTATGTTGATGATCTTTTTGTTACAGGAACAAGCATGAGTCTTATCTTCGAGTTTAAAAAGGAAATGGCTACAAAATTCGAGATGAGTGACCTCGGATGCTTGACATATTATCTCGGTATTGAAGTTTGTCAACATCAAGAAGGGATATCATTAAATCAAAAGAAGTATGCATTGAAGATCATAGAAGAAGGTGGAATGAAGGATTGTAATTCAGTTCATTCACCAATGGAATCCGGCCTGAAGCTTGAAAAATCGGAGCATGAAAGGAGTATAGACGCCACAATGTTTAGAAAGAATGTGGGTTGTCTTCGTTACTTGCTGCACACACGACCGGACTTGACTTATTGTGTCGGGATCTTAAGTCGTTATATGCATAACCCAAAGATCTCTCATGGAGCTGCAATGAAACAATGCCTAAGGTATTTAAAAGGTACTACTTCACTTGGGCTTGTATTTGCACGTTCTCAGGCAAAGGTACCGAGACTTGTGGGATATAGCGATAGTAGTCATAATGTCGATCCGGACGACGGAAGAAGTACTGCTGGACACATCTTCTATCTTGGAGGAAGCCCGATCTCGTGGAACACACATAAGCAAGAGACTGTGGCGATGTCTTCTTGTGAGGCCGAGTTCATGGCTGGAACCGAAGCAGCTAGGCAAGCAATTTGGCTAGCGGATCTACTTAGTGAAGTCACGGGACAGCCAAGCGAGAAGGTTACACTGCTCATGGATAACAAGTCAGCCATTGCTCTCACCAAAATCCGGTCTTTCATGGTCGAAGCAAGCACATACATAGGAGGTATCATTTTATAAGAGAATGCGTGGAGAATGGACAAATAGAGGTGGAGCATGTTCCCGGCAACGAGCAAAAGGCGGATATACTTACAAAAGCTTTAGGAAAAATCAAGTTTAAAGAGATGAGGGAGTTCATAGGTGTTCGAGACTTGGCAAAAGAAGACTTCAAGCTTAAGGGGGAGAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

272

Start:

615508  

End:

615779

Strand:

+

>scaffold_1_LTR-Copia_8

TGTTGAGTTAAGCTTGAAGACTTAACTTGGAGAAGAAGCTATCCTAGTCCTAAACCGAGCAATGGTTTAGTTAGAGATAATGATCATATACTTTAGGAGTTATCTAAGTATATGTATTTCTAATAGGATTAGGAATAGGTTTCTTATATAAATATAGATGTCGAGGCATGACATTAAGTGTGAGACATTGAGAGATTGAGAGCTTAAGTTTTGAGATATTTTCTTAAGCAATAAAGAGAGTAATTCTTTATAATCTTTCAAGTGTTTCTTAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

233

Start:

991434  

End:

991666

Strand:

-

>scaffold_1_LTR-Copia_9

AATATAAGAACAACCTTTCTTATTGATTTAGAAAACTACTCAAAAACTAAATCTCTCTCAAGTCTTGTGAAACATCTCTTCACAAGCTTAGTATTTATAGAACCAAGACAACACCTTAATCCTAATTAGATTAGGAAAACAACACAAAGCCTTATCTAAATAACTTGCCCTTATCTAGATCATGTTTGTGAATCCCTTGACTTGCTCCCCAAGTCACTTGGAATTATCCAATA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4229

Start:

991667  

End:

995895

Strand:

-

>scaffold_1_LTR-Copia_10

TTCACCCCCGTAATTCCAACACGAACTCCGGGACGCTTGATCTCTTCAACTCCAATTAGACTCCTCATTTCCTTGAACTTGTATCTCCCTAAAGGCTTGGTTAGTATGTCCGCCTTCTGCTCTTCACCCGGTACATGATCCACTTCGATTTGATCATTCTCCACACACTCACGAATAAAATGATACTTTGCAAGTATGTGCTTTGTCCTCCCATGAAACACCGGATTCTTTGTAAGCGCTATGGCTGCTTTGTTGTCGATCAAAAGCATGACCTTCTCGCCTTCTATGCTTAATATCTCTCCCAACAACTCCTTAAGCCATATAGCTTGCTTTGCTGCTTCTGTAGCGGCAATAAACTCAGCCTCACACGATGACAACGCCACGGTGGGCTGTTTTTGCGACGTCCAAGTGATCGGTGATGAACCGTAATAGAACACATGCCCCGAAGTACTTCTACCATTGTCAATGTCGATATTGTGACTACTATCACTATATCCAATGACTTTGCGTGACCCATCTCTCTTGAAAAATAAGCCAAAGTTAGTAGTTCCTTTTAAGTACCTTAAAACATGCTTGATAGCTTGTCCATGAGACTCTCTCGGACTTTGCATATAACGACTTAGAACTTCAACTGCAAATGACAAATCCGGTCTTGTATGAATAAGATATCTTAGACACCCTATGGTTCTCCTATACTTCGTGGCATCAACCTCCTTCTCATGTTCTGCCTTTGACAAATTTAAACCCGACTCCATTGGTGCATGAGTCAAGTTACACGCTTCCATCTTAGCATCAACTAGAATTCCTTGAGCGTATGCTTCTTGTTTGATTCTAATTCCATCTGCTCCTTGAATCACTTCTATGCCGAGATAGTACGTTAGCTTTCCAAGATCCGACATCTCAAACTTTGTCGACATATCATTTTTGAATCGTTTCATGACCTTAAGAGAAGTACCGGTCACAAACAAATCATCAACGTAGATAGCCACAATCAAGATGTCCTTATCTTCATTCTTACGATATACCGAGGGTTCCTTTAAGCACTTCTTAAAGTTCATCTCCTTTAGGACTTGATCAAGCTTAATATTCCAAGCTCTAGGAGCTTGACGTAGACCATACAACTCCTTGTAAAGCCTATAAACTCGATCCTCTTTTCCTTTCTTCTTAAAACCTTCCGGTTGTATTACGTAAACTAACTCCTTTAGTTCACCGTTTAAGAAAGCAGTCTTCACGTCTAGGTGATGTATTTCCCAACCTCTTGTTGCTGCAAGGGCTATGAGAAGGCGTATAGTTTCTAGTCGTGCTACCGGAGCAAACACTTCTTCGAAATCTATGCCTTGTTGCTGTACATAGCCTTTTGCCACAAGTCTGGCCTTATACTTGCTCACCGATCCGTCCGCTTTCCTTTTAACCTTGTAAACCCATCTTACTCCTATAGGTTTAACGCCTTCTGGTTTGTTGACAAGCTCCCACGTCTTGTTCTTTTCAATAGAATCAATCTCAGCCTTCATTGCATTAACCCACTCTTTAATGTTTTCAGCTTCAAGAAAGTTCTCGGGTTCACCGTCTATGGTAAGAAACAATCTTCCACTTTCTTGTTCTGCAAGTAAAACATAATCGTTAAGATAATTTGGCTTAATTATCACACGACCTGATCTTGTCACCAAAGGTTGATTCCCAGCTTGTTGATTCACGTCATTATTTTCTTCATTTTGTATGTTTTCTTTTTCCTCCTCCTCATCTTGGTTGTCTTGGTTTATAGCTTCTTGATCTGGTTCTTGTTGGACATTTTCGTGATCACCCTCATGATCTTCTCCATCTTCTATAACACCATCTTGAGGAAGCTTAAACATACCCGGTTCTCCATCGGATTCCTTTGTGATAGATGACCAGTCCCAAGCTTTCTTCTCGTCAAAGACCACATCTCTACTAACGATTACCTTCTTTGTAACCGGATCATAGAGTCTATAAGCTTTGGAACCCGGTTCTGTTCCAAGATTGATCACTTTCTTTGATCTATCATCAAGCTTCTTGATATGAGGCCCATTGATCTTTGCATAAGCAACACATCCAAAAACCCTCAAATGTTCGATGTGAGGTTTCCGGCATGTGAAGCTCTCGTAAGGAGTTTGACCATTTAAAGCTTTTGTGGGCACACAGTTGATGAGATAGGTTGAATGACGTACAGCTTCTCCCCACATATCATTCGGAACCTTCATCGCCTTCATCAAGCTTCTTGTCATCTCCATCAAGGTACAGTTTCTTCTTTCAACCACACCATTTTGCTGTGGCGTGTATGGTGCGGTTAAGTGACGTTTGACTCCATTCTCTTCACAAAACCGATTGAACTCAGCCGAGGTAAACTCTCCCCCCCTATCGGTTCGAAACGTCTTGATGGCCAAACCGGTTTGTTTTTCAACAACACCTTTAAAACGCTTAAATCGATCAAACGCTTCACTCTTTTCTCGTAGTAACATCGTCCACATGTACCTAGAGAAATCATCAATCAAGACAAAAACATAACGATTGTTAGCTGGTGTTGGTGGTGAAATCGGACCACACAAATCTCCATGGATCAACTCCAATGCTTGTGATGCACGAAAACTGGTTTTAGTCGGGAAAGAGCTTCTTGTTTGTTTCCCGGCTAAGCACACCTCGCATACATCCTTCTCATGTATCACTTTCGGCATTCCCACAACCATCTCCTTTTGTACCATGTTATTCATAACACCAAAGCTCACATGTCCCAGCCGAGCATGCCATCTCCATGTAGTTTCATCACCATCGAGTTGTAAACACATAGGAGAATTACTAATTTCCATGGGTGTTTTATAGAGACGATTTGGTGATCTTGTGATTCTTACAAGCAGCCTTCCACACGGGTCTTTTAATGTCAAGAAGTCTCCTCGCATGAGAACTTCACACCCGGCTTCAGTTGCTTGTCCAAGACTCAATATGTTGTGTTTTAGGCTGGGAATATAGTAAATTTCTTTGAGTGCTCTCACCTCCCCTGTCTTGCACACAAAGTTAATTGTACCCTTCCCAACAATGTCAACATAAGAGCCATCACCAAATCTTACTTTCCCTTTAACTCTCTCATCTAAACTACAAAAGTAGCTCTTGTTCCCCGACATGTGGTTACTTGCTCCGTTATCCAAATACCAAACACTTGCATCGCCTTTGTTGATATCAAAATTCTTTGGAATCACTTTGTCTTCGTTTAAGAACACCACCTCATGAACGTAGAGAGCATCGGCCTCATGTGTCTCGTTTAAGTTGGCTTGTTGATGTTGCGTTTGTTTGTTGGGACAATTGTTTGCATAATGTCCCGGTTTATCACATCTCCAACAAATTATTTTGGATAGATCTTTCTTAGGTTTTGGATTCTCCGTGGTTTCTTCTCCTTGGTTTTGGTTTTGGCCATTAGATCTCCCTCGACCACTGCCTCTACCGCCTCTTCCACCTCTTCCTCTACCTCTAGATCCTCCGCGAGACCCACCATGGCCTCCACGATTGTTAGATGTGTTTGTAAACATCAGTTTACCTTGATCGTCACTACTTCTGGTCGCCTTTGTAACTCGATCTTCATAAGCTTTGATTCTTCCCACGATATCTTCAAAGCTTGTTGTGTTTAAGTCAAGAACTTGCTCAAGGGAAGCGACAATGTGAATGAACCTCTCCGGAAGTCCTGCTAAAAACTGTTTCACTAGCTTTACTTCATCAAGGGTTTCTCCTAGTGAAGCGGATTGAGCTGCAAGGCCTGACATCTTCCCTGCAAACTCGTCTACCGATTCAGCATCTCCCATGTGAAGTCGATCGAGTTCTGCCTTGAGAGTCTGGAGCCTTGCGTCTTTCACACGGTCTGCTCCTTGGTGACGAGACTTAACAGCTTCCCACATGTTCTTTGCCGAGTTTTGATCTCCAATATGTAAGATCAAAGTCTCAGGAATTGATTGAAACAATAGAGCGGTTGCCACATCGTTCTTCTTAACGTCCTCAGAACCGGGTTCTATTGTTTCCCATACTTCGCTGACTCGAAGTAACACCTTCATCCTCATTGCCCAAACCGTGTAGTTCGTTGCCGTTAACATTGGACAATGAATTGATGGTGAGCTAAGGTCCTTGGTGCGAGGTTGCGGATTGTTGTCTCTCATCTTGGTGACAAAGCTTTGTGATCAAGTCTCCTTCTTGATCAAAAGAGAACCTTGCTCTAATACCAAATCTAAGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

266

Start:

995878  

End:

996143

Strand:

-

>scaffold_1_LTR-Copia_11

TAATACCAAATCTAAGTTTATATGTGCTTGAGAAATATAAGAACAACCTTTCTTATTGATTTAGAAAACTACTCAAAAACTAAATCTCTCTCAAGTCTTGTGAAACATCTCTTCACAAGCTTAGTATTTATAGAACCAAGACAACACCTTAGTCCTAATTAGATTAGGAAAACAACACAAAGCCTTATCTAAATAACTTGCCCTTATCTAGATCATGTTTGTGAATCCCTTGACTTGCTCCCCAAGTCACTTGGAATTATCCAACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

644

Start:

1232165  

End:

1232808

Strand:

+

>scaffold_1_LTR-Copia_12

TGAAGATACAGTTCCAGAACAGCTTGCTGTGAAGGTCAGGAAGCCGCATCTGTTCAGACGCCTGAGACCACATCAGACGCCTGGGATCACATCAGACACTTGAAGTTGTTGACATGGAGTCGTGAGATGACGTGGCAAAGCTTAAGTGGATGGAGTGACGTGCTAAGGAAGATTTCTTGCTTGGCAGCAAAGATAGAGACGAATTGCGTGTGAAGATATGGTGAATATTCTTCACATCAAATAAGGAAAGGATAAGCTTGACAAGCAAGTATATTCCGTTTCCGTGAGATCCTCGAAGATCCTAGGGTTAGGGTTTCGAGTAGTGAGTATAAATAGTCTAGGGTTTGGCCACGAGCCATTTTGAACACTTTAGACTCTTTGTACGTGATTGTATACTTCGAAGCTAGCAAAACAAAAAGCTGAGAAGGTGAGTGTTTGTTTTCTCTTGGGACTACACGGGTGTAGGAGAGATAGGTTTAATGCTCGTTCTTTAGTCGGGTTCAATTCTATTGGTAGGAATAGATTGAGTAAGAGCCGAGACAAAATTGTATCATAGGAAAAGATAAATTTTGTTAATAAAGATCAAAGGAGAAAGCGTTTGCTTGACGCGTTCCAAGCTTAACTGTCTGTGCGTTTCTCTATAC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

152

Start:

1276020  

End:

1276171

Strand:

-

>scaffold_1_LTR-Copia_13

ACAAGATGTGTTTGGTTTATCTTCTGTGTTTTTATTATTCAAGCATCAATGCATTGTTATACAGAGAAAGAGATATCACCTAAAGTGTTGTGTAGAAAATGACCAAAAGGGACAAACGAAGATATTGACTAAGCTATCTAAGCTACTGACCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4544

Start:

1276239  

End:

1280782

Strand:

-

>scaffold_1_LTR-Copia_14

CCTCCCTCAAGTGGGAGCATGCACATCGAAAATGCCCAACTTGCGAAGAAAGAAACCAACTTCCTTTTGACCCAATGCTTTAGTGAGGATGTCGGCGAGCTGTAGATGAGAAGGAACATAAGTAGTAGCAACAATACCAGCCACGATAGCATCACGAATAAAATGGCAGTCCACCTCAACATGTTTGGTGCGCTCATGTTGAACCGGGTTGACACTTAGAGCAATTGCAGATTTACTATCAGAGAAGATACGCATAGGTTGAACATGAGTGACACCGAGATCATAAAGCACCCTCTTGAGCCACATGAGTTCTTGAGTGAGAAACGCCATAGCTCGATATTCAGCCTCCGCGGAAGAGCGACTAACAGTGGGCTGCTTTTTCGTTTTCCACGATATGGGAGTATCACCAAGCTGCACAAAGTATCCTGTGAGAGAACGACGAGTGAGAGGACAAGCCGCATAGTCACTATCACACCAACCATTAAGCTGAAGAGTGGAATTGCGAGAGAGCAAAATTCCTTGTCCTGGATTAGATTTTAAGTCACGACCAACTCGAACTGCAGCGTCCCAATGATCTTGACGCGGATGTTGCATGAACTGTGCTAGAGTGTGAACGGAGTAAGACAACTCAGGACGTGTGACAGCCAAGTAAATAAGCCTCCCAACAAGACGACGATACCTTGCAGGATCAGATATAAGAGGAGACTTGGACAGCGAGAGTTTATGATTTTGTTCAAGTGGGAAAGCTGATGGTTTAGCTCCAAGAAGTCCCATTTCAGAAATAATATCCAGAACATACTTCCGTTGGGACAAGTAGAATCCTTGATCATTGCGGCTTACTTCAATACCGAGAAAGTATTTGAGTAAACCAAGGTCTTTCATGTGGAAACAAGATTCCAGATATAATTTGAACTGAGCAATAGCCTCAGAACAGTTACCCGAAATGATCAAATCGTCAACATATATGAGGACATGAACATATATGCCATCATTGTTGTAGTTAAACAAAGAGTAATCAGACAATGATTGTGTGAAGCCATATTGTTTCAAGGCGGAAGAAAGCCTAGAGAACCAACATCTCGGAGCTTGTTTTAGACCGTATAAAGACTTATGAAGACGACATACCTTGGTCGGATCATCACATTTAAATCCCTGAGGCAATTTCATATACACTTCCTCCGTCAGATCACCATGTAGGAATGCGTTATGTACATCCATTTGATGTACATGCCAGTCACGAGCAGCAGCCACTCCAAGAAACACACGCACAGTACTCATTTTTGCGACCGGAGCAAAAGTCTCGTCATAGTCCACTCCTTCTTCTTGACGATTACCCAATGCCACTAAGCGAGCCTTGTATCGTTCTACCTCCCCGTCAGAGCGATACTTGATCTTGTAAACCCATTTATTACCAATGGCTCGCTTCCCTGGAGGCAAATTCACAATTGAAAAAGTTTGATTAACGCGCAGAGATTCAATCTCAGCGGACATAGCATCACGCCAAACTTTTTCAATCACAGCTCGATTGTACGTTGTTGGTTCCATACCGAGGGTAACAGCAGCGAGAAAAGCCTTGTGGGATGAGGAGAAGCGATGACAATCAACATATTGCTCAATAGGATAGAGAGAAGATGAAGATTCATCTTTGGAATCAGATTCTACCCGCACAGTATTGGTAACAAAGTTTTTTAAAATTACCGATTTTTCTTTCTTACGATGTCCACGCCCAAGTGGTGTTGGCTCCGTGATTGCATTCGGAGACGTAGATGACTCAGTCGGCAATGGAGAAATATTCATTGTCGTGGTCCCTGGTTCAACTAAAAGAGGCGGAGAAGTGACAGACTCAAGTTGTTGAGTACTTGGGCCATCACTATCAAGGACTGATGTCACGACAGAAGTTGTTGGGCCTGTTTGAGTACTGACATTTGGCCCATTTACTTCAAGAAGATCAATGACGCTCGACAAAATAGGAGATTGATTCACACAACTCAGCATAGGACCATCATCTTCTTTATACTCCTCCTTTGCATATGGAAACTCTGTTTCCTGGAAAATTACATCTCTAGAGACCAAGAATTTTTGTTCCTCTAAGTCAAATAATCTCCATCCTTTCTGGCCGTGTGGATACCCGACAAAGATACAACGCTTTGATCTGGGCTCAAATTTATCTCCTTTATGATTCTGGTTATGTGCGTAGCACAATGAGCCAAAAACACGAAGGTGAAAATAGTGGGGAGCTGTCTTGTACAACATCTCATACGGAGATTTACCTTGAAGAAGTATCGACGGTGTGCGATTGATAAGATAAGCCGCCGACAAGATGCACTCTCCCCAGAACTGAATCGGCAAATGTGACTGAAACCGCAAAGCTCTCGCAATATTTAAAATATGCCGGTGCTTCCTCTCAGCCCTTCCATTCTGATGTGGAGTCCCAACGCATGAAGTTTCATGTGTGATTCCATGTTGCAAAAAATACTCACGCATACAAACGAACTCAGTCCCATTATCACTTCTCACAGTTTTGATCTTAGTTTCAAATTGTCGTTCAACCAAGGCCAAGAAATCTTTCAAATGCTTCTGTGTCTCACCTTTTTCAGTCATCAAATATACCCACACCCCACGTGAGAAATCATCAACAATCGTCAAGAAATATCGAGCACCAGAATAAGACGGTGTGCGGTATGGTCCCCACACATCACAGTGAATAAGTTGAAAAATATCTGAACTTCTATTAGCACTGAGAGGGAATGTTTCACGAGTTTGCTTAGCTCGCATACATGTATCGCATACATTATCCAAAATATCTTTACTACTTGACAAAAGCTCTTTAGGCAGCAAGTTAACTATCTTGTTTGATGCGTGTCCCAAACGCCTATGCCAGAGATCAAAAGAGCCCTTCACACTAGTGTGCACAGCTGCTACATTCTCCATTCTCCGAAAACAAAAACTTCCATCCTCTCGTTTACCAACTCCAGTCACCATCCTCGTAGTGCGGTCCTGTATCACAAGGAAGTGATCAGCGAGTTGAACAACACAATGATTCTCATCCATCATCTGCCCAACAGAGATCAAATCTGATTGCAACTCCTTGACATAGAAAACTGATTTCAAAATCAGTTGTGAACCAAGTCTAATTGTTCCTTCACTAACAGCCACTCTCTTATTCCCATCAGCTAACACAATCAAAACTGGTGACATAGTTCTCAAATCACTCAACAATTCCAGTTTTCCAGTCATGTGGTGTGTCGCACCTGTATCAAGTATCCAAGAAGAGAAAAGAGAACATGTACCTGATAGAGTTTCATGAGCATCGGACTTGTTATCACTTCTTCCAGCATTGAGAAGCTTAACAACTCCACGCCATTGCTCATCAGTAAGCCCGCTAACCGCATCACGGTCTTGGTCAGTGATTACACGGTTCACTTGTTCAGTAGATGAGGATGGCCCGGCCATGACCGCATTCACGTACGTTGGCCGAGTTTGTCCTCCACTAAAACCAGGCCCAAATCTTCCTCTGCCACGGCCTATTGAACTGGTCGAGTTTGATTTTTCTCTTGAACGGTCTCCCCACCACTCTGGATAACCAATCAACATAAAGCAGTTCTCTGGTGAATGACCTCCTCTATTACAATGATTACAGACTTTCTTGTTTTGGGGCTTCGAGTTCACTTCAGAACGTGCTTGAACTGCAAAAGCAGAGACATCAATTCTTTCTTCTTTAGACACTCTATTATTCAACATATCTTCTTCTTGTCTCACTATGTTGTAAACCTCTTCCAGCCCCGGAAGAGGTACACGAGACGTCAAGCTTGAACGTATGGTGTGAAATTTAGTTTCATTCAGACCGTAAAGAAACTGTTGAACCATGTCATCTTCTCGGTCTTTCTCTTGTTGTGTTCCGAGATTGCAGACACATTTACCACATTTGCATATCCGAAGTGGGCGATAGCTGTTGATATTATCCCAAATCTTGTTGAGTTTTCCATAATATCCTTCCACTGTCATACCCTCCTGCTTGCAAGTAGCAAGATCTGTCTTCATCTTTTGATTCTTCGGCCCATTAGAAACAGAGAAACGCTTCCGAATCTGTTCCCACAAGTCTCTCGCCACATCACGGTGGGAGATGTTCGTTAGTAACTCTGAATTAATAGTCATCTTCATCCAAGAGACTAGTAACGCATTAATCGTCAGCCAATCTTCCAGATCTGGTGAATCATCCGGTGGCTGAGGAATAGTTCCATCGAGAAATCCAAACTTTTTCCTAGAGCGTAGCGCAGTTTTGAAACCACATGCCCACTCTTCATAGTTATTAGTCTTCAGTATAGGGTGAGAGATCACAGCTCCCGAGTTATCAGCTGCCGTTAAGTCGTACGGCGAAATCGTGCGTCGGACCTCAGTTACCTGTGTGTTCGTCGGAGTTGTAACTGGAGGTGGTTGAGTGCCAGCCGTAGATGGAGGTGTTGGAGCGTCAGCCATAACTTCAGATGAAGCTTACTTTGTGTTCAATAATTAACTCGAAAATCCCAGATTTTGCTCTGATACCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

152

Start:

1280802  

End:

1280953

Strand:

-

>scaffold_1_LTR-Copia_15

ACAAGATGTGTTTGGTTTATCTTCTGTGTTTTTATTATTCAAGCATCAATGCATTGTTATACAGAGAAAGAGATATCACCTAAAGTGTTGTGTAGAAAATGACCAAAAGGGACAAACGAAGATATTGACTAAGCTATCTAAGCTACTGACCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

156

Start:

1956080  

End:

1956235

Strand:

-

>scaffold_1_LTR-Copia_16

TATTAGTAAAATACTCTCCTTCTCATTAATTGAATAAAGTTACAATTGGGGGTTTATATACAAGTTGACCAGGCCTAAACCAGAGCCTCAATACCAACTTAATACAGCTATACAGACTCCAAACTATAGAAATATATACAAATGAACTATATACTA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4303

Start:

1956241  

End:

1960543

Strand:

-

>scaffold_1_LTR-Copia_17

GTCCCCCTCAAGATGGGGCAAAGATGTTTCGCAGACCCATCTTGCTTACCAAAGTCTGAAAGGGAGCTGGATGTAGAGCTTTAGTAAAAGGATCTGCAAGTTGGATGTGAGTAGAAACATGAAGTAATTTGAACAAACCTGCAATTAACCTTTCACGAATGCTATGACAATCTGATTCGATGTGTTTGGTGCGCTCGTGAAAGACTGAATTGTTGGCGATGTGGATAGCTGCAGTGTTGTCACAAAACAAGAGAGTTGGCTTGCTCAGAGGAATCTGAAGTTCTTTGAAAAACTGAGTGAGCCACATCAACTCATCTGTTGCAAGAGACATGCTGCGATATTCAGATTCAGCTGATGATTTGGAGACAACATTCTGCTTTTTAGACTTCCAAATGATGAGAGATGAGCCAATAAACATGCAGTAGCCTGAAGTAGATCGCCTGGTGTCTAGGCAAGAGCCATAATCTGCATCTGCAAAAGCCTGAATTTGAAGCTCAGCTTTAGAGGAATAGAACAAACCTTGACCAATGGTGCCTTTGATATAATGAAGAATCTTATAAGCAGCCATTTGGTGAGATTCTCTAGGAGCCTCTGAATACTGGCTAACTTTGTTCACTGCAAAAGTAATGTCAGGACGTGTAATTTGCAAATACATCAAGCGACCAATAAGACGTCTATAAGCTTTGGCATCAACAAAATCACCACCACTGTCCTTAGCAAGTTTCACACTAGGATCCATGGGGATATGAGAAGGCTTACAGCCAAGCAAACCTGTTTCATCAAGGAGATCCAAAGCATATTTTCTTTGACTGATAGGAATGCCTTCAGCAGATCTGGCAATTTCAAGTCCAAGAAAATACTTCAAAGGACCAAGATCTCTCAATTTGAAAGAGGATTTGAGTTGAGCCTTGAGATCATCAACTGCAGCATCATTATTGCTAGCAATGATGATATCATCAACATAAACCAGTACACATAAGAAGATCTGAGGAGTAATTTTCAGAAAACAGGTATGATCACAATGAGATTGAGTAAACCCCAGAGCAGTGAGAGTGACTTTGAATTTGAGAAACCACTGTCTAGAGGCTTGTTTCAAACCATATAGAGACTTTTTCAATCTGCAGACCGCATTAGGAGGAAGAGAGTCCCCCTTTCTTGTAGCATATCCTGGAGGCAATTTCATATAGATTTCTTCATCTAAATCACCATTAAGAAAGGCATTTGAGATGTCTAATTGATGTAAGGTGAAACCATATATAGCAGAGATTGCAAGGATGAGCTTAACAGATGTGAGCTTGCAGACAGGAGAAAAAGTATCATTGAAATCAACCCCTTCTTGTTGAGTGTACCCTTTGGCGACTAATCTGGCCTTATACCTCTCTATGCTGCCATCAGCATTGTATTTGATCTTGTAAATCCATTTACAGCCAATAGGAGATTTGTTAGGAGGTAAAGTACAGATTTCCCAGGTTTGAGTAGTTTCCAGAGCATTCACTTCTTCATCCATAGCTCCACACCACACAAGAATTTCTTTTGCCTCAGTGTAGGTAGAGGGTTCTTTATTTTTGTCTATGGAAACCAAGAATGAAAGATAAAGCTCTGACACTTTATCATAAGAAAGAAAAGAGGATATTTCATGTATGGTTGAAGATCCTACTGAATGACAGTAGTAATCTTGAAGATAAGCAGGCTGTTTGATTCTCCTATGTGATGTTTGAACAGAAGGTTCAGGAACATCATTGGTAGAACTAGCAGAAGGCATAGATTCTACAGAAGATGAAGATGGAGAAGCATCAACATCAGAAATCTGAGGAGACATAGGAGAGGTGCTAATCAGATCAGGAAAACAATTTTTAGTTTCCTGAGAAAGATCTGTTTTAGCAAATGGGAAAAGCTCTTCATGAAAAACAACATGTCTGGAAATGATAATGTCATTAGTTTCCAGATCAAGAAGTTTATAGCCTTTAAATCCGGATGGATAGCCTAAGAAGGCACAGGCTCGAGCTCGGGGATCAAATTTATGCCTATTTTTGGGTGAGGTTGAAGCATAGCAAAGACAACCTAAGACTTTCAATTCATCATAGTTAGGAAGTTTCTTTGTTAAAACCTCATAAGGACTTTTGTCCTCTAGAACAGGAGCTGGCAAGCGATTTATGAGGTGAACAGCAGAGAGCACACAATCACCCCAGTAAGCAAGAGGAAGATGAGATTGAAAAAGAAGAGCTCTAGCAACATTAAGAATATGCTGATGTTTTCTTTCAACAACAGAGTTTTGTTGAGGAGTCTCAGGACAGGAATGGTAAGGAAGAATGCCTTTAGTTTTATAAAAATCAGTGAAATTAAACTCTTGAGCATTGTCAGACCTAACCCCCTTAACTCTAGTCTGAAATTGATTTTCCACCATATTAATGAAAGAAGGAAAGATATGAAGAACATCAGATTTTTGTTTCATCAAATATACCCAAGTAGCTCTAGAATGATCATCAACAATGGTTAAGAAATACTTAAAACCATCATGAGTGGGAACAGAGAAGGGACCCCAAGTGTCAATATGAACTAACTCAAAGGGTATTTTTCTGATATTATTTTGAGAAACAAAAGGAATATGTTTTTGTTTTGCCAAATGGCAAGTTTTACAATGAAAATCTTTTTGGATTTTTGGTTCTTTTTTGAAATTTAAAACAGGTGAAAGAGACTGAAGTTTATAAAAGGAAGGATGGCCTAACCGTTTATGCCATAGATCATGAGAAGTGACAGAGGCAGCGACAAAAGAAGCTTTATTGGTAGGCATGTCAATGGATTCGATGTCCAGAAAATAGAGGTTAGCGATCTGTCTACCCATTCCAATCATTAAGTCCCGAGAAAGATCCTGAAGAGCACAAGAATTCTCATCAAACCAGATTTTGCATCCCATGGATTTGGTCAAACAACTGACACTTAAGAGATTGAATTTGAATTGGGGAATATAAAGAACATCATGGAGAACTAAATGACTGCCCAAATGAATAGATCCTATGCCAACAATGCTCACTAGACCACCATTAGGAAGATTGACATTGGTGTTAGTGATATTTTGAAAAGTGGAGAAAGAAGATCTATCATGACAGATATGATTAGTAGCTCCTGTGTCTATAACCCAAGCATTGATAACAATAGTGTTACTATAAGTAGAATAGGCATATGGCCTATCAGCACTGGCAAAAGAACAAATGATAGAGGGAAAGAAGGTACCAGGTGCTGGGCCTGTAGGTAAAGAAGAAGGGAGGGAAGACACTGAGACAGCATGAACTTCAGGTGTGATGGTGGAGCTAGTGATTCTGGTGTGAAGAAAGGAAACAATCTGTTGCATCTGTTCTGTGGAGAGGTCATCAGTCACTTTACCATTGTCCAAGGCAACATTGATGTCAGCAGAACCTTCAGAAACAACATTTGCTGCAATGGGAGTTTTAGTAGGACCTTTGAACCGAGGATGACCAACTGGATATCCATTCTTCTTATAACACTTATCCAGGACATGTCCAGTGCGACCACAGAAAGTGCAAATAGGTTTGTCTCTCCTTTGATACTGATAACCACCAGAAGATGAGCCCTGAGAAGACTGTTGAGAAACTTGGAAGGCTGAGGAATCAAGAGAGCCAGTTGCAGGAAGAGTAGCTGATCTTTGAGAATCATCTTGATCAAGCATGTTGTAAACTTCAGACAAAGTAGGTAAGCTCTTCTTCATGAGAATCTGACTTCTGACTGTGTCATAAGTGTTGTTGAGACCCATAAGAAAGTCAATGACGCGGTTAGTTTCTCTTTCAGCCATCAAATCTTCCACAGTGCGAGCAGTGACCTGAAGACTAGAAAGTTCTTCCCAGAGAGACTGAGTCTTAGTATGATAAGAAGACAAGTCCATACTACCTTGACGAAGCGAATGTATCTGCTGACGCAATTTGTACAATCGTGGGAGGTTAGATTTGTGATATCGAGTATAGAGATCTTTCCATATCTCAGTCGCAGTGTTGAAATACAAGATGCTGGAATAGATCGGCTTCGATACACTGTTTAACAACCAAGATTTGACCATACTATTGCATCGCTTCCAAATCAGATAGTAAGGATCAGATTCAAGAGGTCGAGTAATGGAACCATCCACAAATCCTAACTTATTCTTAGCTTCGATACTAGTAGTCATAACTACAATCCAGGTTCCATAGTTTGTTCCATCTAAGAGATCGGGAACGAGAACTAAACCTGGATGATCGGAGCTGTGGAGATGGAAAGGACTGTGAATATTGTCCGGTGAATCCGAGACCACAAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

164

Start:

1960915  

End:

1961078

Strand:

-

>scaffold_1_LTR-Copia_18

TGATACCATATTAGTAAAATACTCTCCTTCTCATTAATTGAATAAAGTTACAATTGGGGGTTTATATACAAGTTGACCAGGCCTAAACCAGAGCCTCAATACCAACTTAATACAGCTATACAGACTCCAAACTATAGAAATATATACAAATGAACTATATACTA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

88

Start:

2431701  

End:

2431788

Strand:

-

>scaffold_1_LTR-Copia_19

AGTGAATCTGAAATAATTAGGCCGAGTATGTCCTTAATCAATTTCCACAATGATGACAATAGAAACAGTGACATTTCACATCATAAAC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

133

Start:

4919612  

End:

4919744

Strand:

-

>scaffold_1_LTR-Copia_20

TGCATAAGTTGTGCCAACAACACATGTAAACAATAAGCAAATTAAATTGGTTCTTGTTACTGCCAAGTAGATCAATCTACCAATGGGTTTGCCATAAGGCTCATGGATCAATTACAAGTTGGTGATTTGGACA