ID Class Order Superfamily Length Start End Strand View
Chr1_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA11278806567880767+
Chr1_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA16981008628101030+
Chr1_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA14282499998250140-
Chr1_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA15090380889038237-
Chr1_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA15091769439177092+
Chr1_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA10696521339652238+
Chr1_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA1711016357810163748-
Chr1_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA1291028905610289184-
Chr1_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA1631040700610407168+
Chr1_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA1191075599510756113-
Chr1_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA1561135415311354308+
Chr1_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA1661314907013149235+
Chr1_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA1661341024313410408+
Chr1_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA1401347891613479055-
Chr1_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA1341440870314408836+
Chr1_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA1611462320614623366-
Chr1_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA3161476356614763881+
Chr1_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA1741886540318865576+
Chr1_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA1001928390019283999+
Chr1_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA1641933950919339672+

< 1 2 3 4 5 > Total 16


Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

112

Start:

7880656  

End:

7880767

Strand:

+

>Chr1_SINE-tRNA_1

CCAGTATGAGTGACGTTTGATACAAAATTAATATTACATGTTGTGGTTTCGAGCCTGAGAGATTATAGTTTCGGTCTAGAACTTCCTCGTATTCAAATAAAAATAAAAACAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

169

Start:

8100862  

End:

8101030

Strand:

+

>Chr1_SINE-tRNA_2

ACCAAGTGTCATTAGCTCAATTCATAAAGATCCTAGGCAAAACTTAAAGGTTGTTGAATCGAATGACGTTTGAAATGAAATTAATATTACATGCTGTAGTTTCGGTCTGGGAGATTATGGATTTCGGCCCAAAACCTCCTGATATTCAGAAAAAAAAAAAAGAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

142

Start:

8249999  

End:

8250140

Strand:

-

>Chr1_SINE-tRNA_3

TTTTTTCTTTTTTTTTTTGAATATCATGATGTTTTGGTCTGAAATCTGTAGTCTTATGCTCGAAGCCACATCATATAATATTAGTTTCGTTTCAATCATCACTCAAATCGGCAACCTCTAATCTTTATCTAAAATCTTTATC

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

150

Start:

9038088  

End:

9038237

Strand:

-

>Chr1_SINE-tRNA_4

TTTTGAATTATCAAGAGGTTCTGACCGAAACTCATACATCCTCCCAGACTCAAGACCAGAGCATGTTATATGGTCCTGTCTCAACTGCCACTACTCGAACTGACGTTTTCTTAAATAATCCCAAAGAACTTTATCAACAAAATTAGCGAC

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

150

Start:

9176943  

End:

9177092

Strand:

+

>Chr1_SINE-tRNA_5

TGGTAAATACTCTAAACAAAGTTTAGAGGTGGCTGGTTCGGGTGACGCTTAAGACAAAACTAATATTATATGTTATAGTTTCGGAGGGTATGTAGAATTATGGATTTCGATCCAGAACCTCCTGATATTCTAAAAAAAAAAAAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

106

Start:

9652133  

End:

9652238

Strand:

+

>Chr1_SINE-tRNA_6

ACCAAGTGTCGTTAACTCGACCAGAAAAATATTTTAAGGAAAACTTAGAGGTCACATGATTAAGTGAAACTTGGGATGAAACTAATATTACATGGTGTGGTTTCAG

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

171

Start:

10163578  

End:

10163748

Strand:

-

>Chr1_SINE-tRNA_7

TTTTTTTTTTTTTTTTTAAATTATCAGGAGGTTCTGTGTCGAAATCTATACATTTTTCCAGACTCAAGATCAGAGTAGATTATATAATTTTATTCCAGCTACCGCTACTTGAACTAGCGTCCTTTTAGATTATTCCAAGGAAGTTTACTAACCGAGCCAACGACCTTTGAT

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

129

Start:

10289056  

End:

10289184

Strand:

-

>Chr1_SINE-tRNA_8

GTTCTGGGTGAAATCCGTAATCTCCAACCCCAAAACAACATCATGTAATATTATTAGTTTAGTCCTAAACATCACTCAACCTCTAAGTTTCACCTAGAATATTTACCAATTGAGCTAACAATACTTGGT

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

10407006  

End:

10407168

Strand:

+

>Chr1_SINE-tRNA_9

ACCAAATAGTTAGCTCGACTGGTAAAGATCTTAAGCGAAGCTTAGAAGTCGTTCATTAGAATAACGTTTGGGACAAAATTAATATTACATTTTGTGGTTTCGGATCTGGTGAGATTAAGAGCATCAGCCCATAACCTAGTGGTATCCAAAAAAAATCAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

119

Start:

10755995  

End:

10756113

Strand:

-

>Chr1_SINE-tRNA_10

TTTTTTTTTTTTTTTGAATATCAGGAGGTTCTGGGCCGAATCCCTGTAATCTCTCAGGCCCGAAACCACAACATGTTAGTTTTGCTCCAAGAATCACTCGAACAGTTTCGCCTAGGGTC

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

156

Start:

11354153  

End:

11354308

Strand:

+

>Chr1_SINE-tRNA_11

ATCAAGTGTTTTTAGCTGGACTGAAAAAATACTTCTAGACAAAACATAAATATCACAAAATCGAGTAATACTTTAGACGAAACTAATATTACATAATGTAGTTTTGTGTCAGGGAAGTTACGAATTTTGATCTAAAATTTTCTCGTAATTCAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

166

Start:

13149070  

End:

13149235

Strand:

+

>Chr1_SINE-tRNA_12

ACCAAGTGTCATTAGCTCAACTGGTAAAGACCTTAGGCAAAGCTTAAAGGTCGCCGGTTCGAGTGACGCTTGGAACAAAACTAATATTACATGTTATAATTTCGGGTCTGAGAGAATTACGGGCTTCGCTCCAGAACTTCCTGGTATCCAAAAAAAAAAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

166

Start:

13410243  

End:

13410408

Strand:

+

>Chr1_SINE-tRNA_13

ACCAAGTATCGTTAGCTCAACTGGTAAAGATTTTAGGAAAAGCTTTTAGAGGTTACCGGTTAGAATAAAACATGGGACGAAATTAATATTATATGTTATAGTTTCAGACTGAAGATTAGGAGTTTCGGCCTAAAATCTTTTGATATTAAAAAAAAAAAAAACAGAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

140

Start:

13478916  

End:

13479055

Strand:

-

>Chr1_SINE-tRNA_14

TTTTTTTTTGTTTTTTTAATATCAGAAGGTTTTTGATTGAACTTTGTAATCCTTCAAACCCGAAACCACATAATGTAATATTAGTTTTGTCCCATACGTCACTCGAACCGGCTACATCTAAGTTTCATCTAGAATCTTTA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

134

Start:

14408703  

End:

14408836

Strand:

+

>Chr1_SINE-tRNA_15

ACCCTAGGCGAAGCAGAGGTCGTCAGGTTTGAATGACGCTTAGGACGAAATTAACATTACATGTTGTGGTTTCGGGTCTTGGGGGATTACGGATTTCGATCCAGAACCTCCTGGTACTGAAAAAGGAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

14623206  

End:

14623366

Strand:

-

>Chr1_SINE-tRNA_16

TTTTCTTTTTTTGGAATACCAAGAGGTTTTAGACCGAAACTCATAATCTCTTAGTCCCAAAATTACATCATTTAATATTAGTTTCATCTTAAGCATCATTCGAACCGACGACTTCTAAACTTTTCCTAAAATCTTTATCAGTTGAACTAACGACATTTAGT

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

316

Start:

14763566  

End:

14763881

Strand:

+

>Chr1_SINE-tRNA_17

GTGGAAGCCCCTTGGTCCATTATTTGACCAAGGGTTCATTAATGCTTCTATATCATGAGATCTTTAATTCGAGTCCTAGGTATTGTAATTTATTAATAAATTTTCAGATTAATGGAGGCAAGTTTATAGGAGATCTCCAGCGATGCACAACTAAAATCGTTTCCCTTGATTCTATGCAGAAAAGGGAGGAGCCCATTAAGAGCCTGGAGAAAGAAGTATCGTCTGTATTCAATCTAATAAGGGTCGGAAAGGATTTTCCATAGTAGAATTATTTATGTAACAGTTCTCATAATTTGCAATAAATAATAAATCTAGA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

174

Start:

18865403  

End:

18865576

Strand:

+

>Chr1_SINE-tRNA_18

ACCAGAAGTTGCTAGCTCTGTTGGTAAAGTTTTTTGGGTAATCCAAGAAAACGCCAGTTCGAGTAGCGGCAGGTGGGACAGGACTATATAACCTGCTCTGGTCCTGGACCTGGGAAGATCTATGGGCTTTGGCCCAGAACCTCCCAATGATTCAAAAAAAAAAAAAAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

100

Start:

19283900  

End:

19283999

Strand:

+

>Chr1_SINE-tRNA_19

GGAGGTCACAGGTTTGATTCACGTTGGGAGGAGTCTGCTCTCCAAAGGACAGTTAAATTACATGCTATGGACCTTGCCATGAGGAGATGTAGGGCCTCTG

Cardamine hirsuta (v1.0)

ID:

Chr1_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

19339509  

End:

19339672

Strand:

+

>Chr1_SINE-tRNA_20

ACTAAGTGTCGTTAGCTCAACTGGTAAAGATCCTAGGCAAGGTTTTGAGGTCGTCGGTTCAATTGATGTTTAGGACTAAACTAATATTCCATGATGTGGTTTCCGGCCTGGAGGGGGGGGGTGATTATAGGCTTTGGCCAGAACCTCCCAGTATTAAAAAAAAA