TBGR-Browse-Chi-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Chr1_Retroposon-L1-dep_1	Other	Retroposon	Retroposon-L1-dep	262	23105600	23105861	-
Chr2_Retroposon-L1-dep_2	Other	Retroposon	Retroposon-L1-dep	253	13334675	13334927	-
Chr2_Retroposon-L1-dep_3	Other	Retroposon	Retroposon-L1-dep	397	14651683	14652079	-
Chr3_Retroposon-L1-dep_4	Other	Retroposon	Retroposon-L1-dep	108	20911904	20912011	+
Chr4_Retroposon-L1-dep_5	Other	Retroposon	Retroposon-L1-dep	366	5392955	5393320	-
Chr4_Retroposon-L1-dep_6	Other	Retroposon	Retroposon-L1-dep	309	12185731	12186039	+
Chr5_Retroposon-L1-dep_7	Other	Retroposon	Retroposon-L1-dep	490	5906686	5907175	+
Chr6_Retroposon-L1-dep_8	Other	Retroposon	Retroposon-L1-dep	194	15406029	15406222	-
Chr7_Retroposon-L1-dep_9	Other	Retroposon	Retroposon-L1-dep	384	1786491	1786874	+
Chr7_Retroposon-L1-dep_10	Other	Retroposon	Retroposon-L1-dep	464	5169035	5169498	+
Chr7_Retroposon-L1-dep_11	Other	Retroposon	Retroposon-L1-dep	123	5169624	5169746	+
Chr7_Retroposon-L1-dep_12	Other	Retroposon	Retroposon-L1-dep	463	6523978	6524440	+
Chr7_Retroposon-L1-dep_13	Other	Retroposon	Retroposon-L1-dep	260	9308702	9308961	-
Chr7_Retroposon-L1-dep_14	Other	Retroposon	Retroposon-L1-dep	376	12168723	12169098	+
Chr7_Retroposon-L1-dep_15	Other	Retroposon	Retroposon-L1-dep	317	13421881	13422197	-
Chr7_Retroposon-L1-dep_16	Other	Retroposon	Retroposon-L1-dep	318	15467492	15467809	-
Chr8_Retroposon-L1-dep_17	Other	Retroposon	Retroposon-L1-dep	362	9729824	9730185	-
NSCAFB.163_Retroposon-L1-dep_18	Other	Retroposon	Retroposon-L1-dep	216	370182	370397	+

Cardamine hirsuta (v1.0)

ID:

Chr1_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

262

Start:

23105600

End:

23105861

Strand:

-

>Chr1_Retroposon-L1-dep_1

GAAGGCTCAAGGAGAAAATCTTGAACTCCAACAGAAGATAAACCACAAAAGACCAACAATTCTTACAAGCAGATCCTCGCAAACCAACAACTGCAACGTATAGACAAAAGCTGGCCACCTCCTCTCAAGAGAAGAATTAGAGATCGAAACCATTGCAACGTCTTCAGACACCACCAAACCTCAGAATGAGCTTCAGATAAGTACTAGTAGATATCACTACAGCAGAATACCATCCAAAAGACGAACCCTAAGAACATAATCT

Cardamine hirsuta (v1.0)

ID:

Chr2_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

253

Start:

13334675

End:

13334927

Strand:

-

>Chr2_Retroposon-L1-dep_2

AGAAGAAACCATGAACTCTGACAGGGGGATAGGCCAATAAAGGACCAACAATTCTTACACACGGACACTCGCAAGCCAACAGTTGCCACCAACAGACAAAAGCTGGCTATCTCCACGCAAGAGAAGAACTGGAAATCGACACCACTGCAACATCTTGAAACACCAACGAAACTCAAAATGAGTTTCAGCAAAGCACTAGTAGATGCCATTGCAGCAGAGAAACATCCAAGTGACGAACCCCAAGAACAGAACC

Cardamine hirsuta (v1.0)

ID:

Chr2_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

397

Start:

14651683

End:

14652079

Strand:

-

>Chr2_Retroposon-L1-dep_3

CCAGCAGACCTAACCGACAGGAATAAAAGCAGAAGCAGACTAGAACGCAGAACAGAAACCACTACCCCACATCAAGCTTCCTCGGTGCCGAGACAAAGACGAGATAGGGACAAGGATGAAACCTTGAAACCCAAAAGAGACAAGCCAACAAGGACCAACCAATCTTGCACACGGGCCCTCGCCAACCCAACTTCAGCCATCTACAGTCAAAAAGCTGGTGACGTCCACGCAAGAGAAGAGAAGAAGGTCAAACCCACTGTGATGCCTAGAACCAAACTTCAAGATCCAAAAACCTCAGAGAAAGGCTAGTCGATGACTTCACCACGAGTTAGCATCCAATTGGCGAACAACAAGAAGGAACCAATCTCAAAACGCCCCGAAAACACAAGTAACAAGA

Cardamine hirsuta (v1.0)

ID:

Chr3_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

108

Start:

20911904

End:

20912011

Strand:

+

>Chr3_Retroposon-L1-dep_4

TTTCTCTCTCAAACCCCTAATCGCCGCTTCTTCCTTAAACTTTGATCCAGATCTCTGTGGCTCGAGATTGGTGGCCGGTGGCTTCCTAAGCACCGGTGCCGGTCTCCC

Cardamine hirsuta (v1.0)

ID:

Chr4_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

366

Start:

5392955

End:

5393320

Strand:

-

>Chr4_Retroposon-L1-dep_5

AACACCAGCAGAAGAGGATACAATCATAAGCTAGACAGGAGCACAAAAACAAATATCATTTCAGCCGCATCAAGGAGACAAAACCAACGCAATGACGAAGGCTCAAGGAGAAAACCATGAACTCTGAAAGGGGATGAGCCAAAAAGGACCAACAATTCTTACACGCGGACCTTCGCAAGCCAACCGTTGCCACCTACAGACAAAAACTGGCCACCGCCACGCAAGAGAAGAAGTGGAGATCGAGACCACTGCAGCGTCTTGAAACACCTCCTAAACTCAGAATGAGCTTTAGAGAAGTACTAGTAGATGCCACTGCAACAGAAAAACATTCAAGAGACAAACCCCAAGAACAGAACCTCACACAAA

Cardamine hirsuta (v1.0)

ID:

Chr4_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

309

Start:

12185731

End:

12186039

Strand:

+

>Chr4_Retroposon-L1-dep_6

TCTTGTTACTTGTGTTTTCGGGGCGTTTTGAGATTGGTTCCTTCTTGTTGTTCGCCAATTGGATGCTAACTCGTGGTGAAGTCATCTACTAGCCTTTCTCTAAGGTTTTTGGATCTTGAAGTTTGGTTCTAGGCATCACAGTGGGGTTGACCTTCTTCTCTTCTCTTGCGTGGACGTCACCAGCTTTTTGTCTGTAGATGGCTGAAGTTGGGTCGGCGAGGGCCCGTGTGCAAGATAGGTTGGTCCTTGTTGGCTTGTCTCTTTTGGGTTTCAAGGTTTTATCCTTGTCCCCTTTCTCATCTTTGTCTT

Cardamine hirsuta (v1.0)

ID:

Chr5_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

490

Start:

5906686

End:

5907175

Strand:

+

>Chr5_Retroposon-L1-dep_7

TTTGTTTAGTTTCGGGTAGATGAGTTAATAGCCTTAGTTTCAGTTTTTTGGTTAGCGTGTCTTGATTCTTAGATCTTCCCCTTGTTGTCTCCTCTTAGAGTGGTTGGTGCTTTGATTAGGCTTTAGGTTTCGGTTGTGGGTTCATCTCTTGGATTGTATTTCACTTCGATGGCATCTACTAGCTCTTTTTGTCTCCTGTTTGGAGTTCATATTTGGTTTAAGACATTGAGGTGGTTTAGGTCTCCATTTATTGTCTTGCGTGGGGGTAACCAGTTTTTGGTCTGTAGATGATCTTGGCAGAGTCTGCCCAAGGTCCGCATGTAAGAAGTGGGTATCCTATTTGGCGGTTTCCCCTTCCGGATCTCAAGAATTCTTCTTGATCCTTTGTCTTCTCTGATTCATTGCTCTCTTCAAAGTGGTCGTGATGAGTGGTTTGTTGTGCTCAGTCTTGTTGCCAAGCTGTTTTCGTTTCTGCGGTGGTTGTAGTGGT

Cardamine hirsuta (v1.0)

ID:

Chr6_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

194

Start:

15406029

End:

15406222

Strand:

-

>Chr6_Retroposon-L1-dep_8

TCTTTTTTTTTCTCGTTTAGAAATTTCATTGATAATTTTTAGATGAGTCATACAAAGCTGGCAATGATCATAATCCTTACAGCGAAAAAGCTGACGAGTTCTTGAATACTATACTCCCAAAGACAAAACCCAAGACAGGGACACAAACATGAGAAAAAAAAATCTTTAAAAACATATGAAAAGGCTAACATCCA

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

384

Start:

1786491

End:

1786874

Strand:

+

>Chr7_Retroposon-L1-dep_9

TCTTGTTGCTTGTGTCTCTGGGGCGTTATGAGATAGGTTCCTTTTTGTTGTTCGTCAATTGGATGCTAATTCGTTGTGAAGTCATCTATTAGCCTTTCTCTGAGGTTCTTTGGATCTTGAAGTTTGGTTCTAGGCATCACAGTGGGTTTGACGTTCTGTTCTTCTCTTGCGAGGACGCACCAGCTTTTTGATTGTAGATGACTGAAGTTGGGTCGGCGAGGGCCCGCGTGCAAGATTGGTTGGTCCTTGTTGGCTTGTCTCTTTTGGGCTTCAAGGTTTCATCTTTGTCCCTATCTCGTCTTTGTCTCGGTACCGGGTTAGCTTGATGTCGGGTAGTGGTTTCTGTTTTGCGTTCTAGTTTGTTTCTGCTTTCATTCCTGTCGG

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

464

Start:

5169035

End:

5169498

Strand:

+

>Chr7_Retroposon-L1-dep_10

AGCCTTAGTTTCAGTTTTTGGATTAGCGTGTCTTGATTCTTAGATCGTCCCCTTGTTGTCTTCTTTTAGAGTGGTTGGTGCTTTGAGTTGGCTTAGGTTTCGATTTGTGGGGTCATCTCTTGGATTGTATTTCACTTCGATGGCATCTACTAGCTCCGTTTTGTCTCCTGTTTGGAGTTCAGATTTGGGTTTAAGACGTTGAGGTGGTTTAGGTCTCCATTTCTTCTCTTGCGTGGCGTAACCAGTTTTTGGTCTGTAGATGATCTTGGCTGGGTCTACGAAGGTCCGCGTGTAAGAAGTGGGTATCCTATTTGGTGTTTTCCCCTTCCAGATCTCAAGAATTCTTCTTGATCCTTTGTCTTCTTCGATTTATTGGTCTCTTCAAAGTGGTCGTGGTGAGTGGGTTGTTGTGCTCAGTCTTATTGCCAAGTTGTTTCTGTTTCTGCGGTTGTTGTAGCGGTTGT

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

123

Start:

5169624

End:

5169746

Strand:

+

>Chr7_Retroposon-L1-dep_11

TAAGTTTCAGATGTTAGCCTCGTGATTCTGTTCTTGAGGTGTTTTGTCATGTTATTTTCTCTCTTTTGAGCTTTTGGTTATGAGAGTTTCTAAGAACTCTTCATCTTTGTTTTGGGAAGGATT

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

463

Start:

6523978

End:

6524440

Strand:

+

>Chr7_Retroposon-L1-dep_12

TGGCAATATTGGATCCTAGTGCTTCTTGTCTGTTGTGTTAGCTCAAGTTTATTGTGTGTGCGTTGGCCGAGTTTTCGTTCTTTGGGGTTCATCATTCAGATGGTATTCTGCTGCAAAGGAATCTACCAGCTCTTCGCTGAGGTCTATTTGGGTTTTGGGTTCAAGACGATGAAGTGGTTTTGATCTTCAGTTCTTCTCTTGCGAGGAGGTGGCAAGTCTTTTGTCTGTAGATGGCTGAGATTTGTTTGCGAGTTTCCGCGTGTAAGAGTTGGAGAGCTTCCTTGGTGTATCCCCAACCAGTTTTCAAGGTTTCTCCTTGAGTTTCGGTTATCTCGTGTACATTAATTCATTTGAGTTGTCGTGATGGTTCTAGGTTCTGTGATCTGTTTTTCTTTCATTCCTGTGTTTGGTTCTGCTGGTTGTTGCTGGTTGTGCTCGTTTTAGCACCTTCTTCGGGCTTTCA

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

260

Start:

9308702

End:

9308961

Strand:

-

>Chr7_Retroposon-L1-dep_13

GAAGGTCCAATGAGAAGATCTTGAAATCCGACAAGGGATACGCCAAAAAGGACAAGCAACTCTTACACGCGGACACTCGCAAACCAAAATTTGCCATTTACAGACAAAAGCTGGCCACCTCCTCGCAAAAGATGAATTGAAGATCGAAACCACTGCAAGTCTTGAAACCAAACCCAAACCTCAAAGAGTTTCAGAGAATAACTAGTAGATGCATGTGCAGCAGAATACCATCCAAGAGATGAACCCCAAGAACAGACCCT

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

376

Start:

12168723

End:

12169098

Strand:

+

>Chr7_Retroposon-L1-dep_14

TATTTGTAGTTGAGGAAATTAGCCTTAGTCACAGTTTTTGAGCTAACTTTCTTGATTTTTTTTCTTCCCCTTTGGTATCTCTTCTTGAAGTGTTGGTGTGTTATGCTGGCTTAGGTTTCGGTTTGTGGGTTTTATCATTCAGGTGGCATTTTACTACTGAGGCATCTACAAGCTCCTATTTTATTTCAACTTTGGCTTCAGATTTGGGTTCAAGACGTCGTGGTGGTCTCGGCCTCCATTCCTTCTCTTGTGTGATGTAACTAGTTTTTGGTTTGTAGATGGCTTTGACTGGGTCTACTTAAAGTTGCATGTAAGAAATGGGGGGTCCTCTTTGATGTTTTTCAAAATCTGATCTTTAGGTTTCTCTTTAACCTTT

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

317

Start:

13421881

End:

13422197

Strand:

-

>Chr7_Retroposon-L1-dep_15

AACACCAGCAGAAGAGGATACATTCATAAGCTAGATAGGAGCACAGAAACAAACATCATTTCAGCCACATAAAGGAAACAAAACCAACGCAATGAAGAAGGCTCAAGTAGAAAACCATGAACTCTGAAAGGGCATGAGCCAAAAAGGACCAACAATTATTACACGCGGACCTTCGCAAGCCAACCGTTGCCACCTACAGACAAAAACTGGCCACCGCCACGCAAGAGAAGAAGTGAAGATCGAGACCACTGGAGCGTCTTGAAACATCTCCTAAACTCAAAATGAGCTTTAGAGAAGTACTAGTAGATGCCACTGCA

Cardamine hirsuta (v1.0)

ID:

Chr7_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

318

Start:

15467492

End:

15467809

Strand:

-

>Chr7_Retroposon-L1-dep_16

CACAGAAACTAACGCCATCAATGCCACTCCAAGTAGACGATGAAAACGAGATAGCGAGGCTTAATGCAAAAAACCTTGACTTCTGAAAGGGGATACACAAAAAAGCCCTCCAATTCTTGCGCGTGGACACTAGCAAATCAATCTCAACCACATATAGACTAAAGACAACCACCTTTCGCAAGAGAAGAACTTAATACCGAAACCACTACAAAGCCTTGAACCCAATCTCAAACGCCAAACGAGCCGCAGAGAAGAGCTAGTAGATGCCAATATAGTAAAATACCATCCAAGAGATCGAAACCAAGACCAAAACTAAAC

Cardamine hirsuta (v1.0)

ID:

Chr8_Retroposon-L1-dep_17

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

362

Start:

9729824

End:

9730185

Strand:

-

>Chr8_Retroposon-L1-dep_17

AACACCAGCAGAAGAGGAAGCTTTCATAAACTAAACAAGAGCATAGAAATCAACATCATTTCAGCCACACCAAGAACACAAAACCAATGCATTGAAGAAGACTCAAGGAGAAAATCATGAACTCTGACAGGGGATAAGCCAAAAAGGACCAACAAATCTTACACGCGGACATTCGCAAGCCAACAGTTGCCACCTACAGACAAAAACTGGCCACCGCCACGCAAGAGAAGACATGTAGATCGAGACCACTTCAACGTCTTGAAACATCTCCTAACCTTAAAATGAGCTTTAGAGAAGTACTAGTAGATGCCACTGCAGCAGAAAAATACCAAGAGACAAACCCCAAGAACAGAACCTCAAAC

Cardamine hirsuta (v1.0)

ID:

NSCAFB.163_Retroposon-L1-dep_18

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

216

Start:

370182

End:

370397

Strand:

+

>NSCAFB.163_Retroposon-L1-dep_18

CATGTGTAAGATTTGGAGGTCTTCTTTGGTGTGTCCCCAGTCGGTTTTCAAGGCTTCTCTTTGAGATTAATTCTTCTCGTGCGCATTGGTTTCTTGAAGTGTTCGTGATGCATGGTTTTTAAGTCCTTTGATATGTTCTTCTCTCATTTCTGGTTTGGTTCTGTTGGTGTTGTTGTTGGTTATGCTCCGTGTAACACCTTCTTTAGGCTTTCAGGT