ID Class Order Superfamily Length Start End Strand View
Chr1_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro17662463376246512-
Chr1_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro12368585476858669-
Chr1_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro29393891979389489+
Chr1_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro8795570979557183+
Chr1_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro17998317769831954-
Chr1_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro1752554003325540207-
Chr2_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro971625778516257881+
Chr3_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro19465589756559168-
Chr4_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro8810736501073737-
Chr4_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro981440740314407500-
Chr4_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro1111889034318890453+
Chr5_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro8277690537769134+
Chr5_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro1341749171017491843+
Chr5_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro892105464921054737+
Chr6_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro8766038396603925+
Chr6_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro2831696636116966643+
Chr6_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro1011788608317886183-
Chr6_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro1271830784518307971+
Chr7_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro8351357215135803-
Chr7_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro851494384914943933+

< 1 2 > Total 2


Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

176

Start:

6246337  

End:

6246512

Strand:

-

>Chr1_LTR-Ngaro_1

GCTGTTGTTGATTAATCTGCATCTGCTGTTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGCATCTGTTGTTGTGGTTGCTGATGCTGTAGCTGTTGCTGCATCTGTTGTATTTGCTGGGACTGGTTCATCTGCGCCTGGCCTAATTGTGATTGTTGCTGTTGTTGATGT

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

123

Start:

6858547  

End:

6858669

Strand:

-

>Chr1_LTR-Ngaro_2

TTGCTGCTGTTGCTGTTGCTGCTGCTGCTGTAGCTTATGCAGTAGCTGCAACTGAAGCTGTTGTTGTTGATTTGGTTTAGATGATTGTTGTTGCATTTGCAGTTGCTGAGGATTTTGTTGTAG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

293

Start:

9389197  

End:

9389489

Strand:

+

>Chr1_LTR-Ngaro_3

CAACAGCAGCAGCAGCAACAGCAACAGCAGCAGCAACAGCAGCTCCAACAGCAGCATCAACAGCAACAGCAGATCCAGCAGCAGCAACAACAACAACACCACCAACAGCAACAGATGCCACAACAGCAACAGCAACAGCAGCAGATGCCACAGCTGCAGCAGCAGCATCAGTTGTCACAGCTCCAACATCATCAACAGCAACAACAGCAGCAACAGCAGCATCAGTTGACACAGCTTCAACACCATCATCAGCAGCAACAGACGTCGCCACTGAATCAGATGCAGCAACAGAG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

87

Start:

9557097  

End:

9557183

Strand:

+

>Chr1_LTR-Ngaro_4

GTCTCAAGTTGCCCTCCAGGTCTTTATACTTACACACTATACACACACACACATATATATATATATATATACATATATATACTCATA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

179

Start:

9831776  

End:

9831954

Strand:

-

>Chr1_LTR-Ngaro_5

TGTTGAAAATGTAATTGTCGAGCATGGGACTGTTGTTGTTCCTGTAGGAGCTTCTGATGTAATTGATGCTCTTGTTGTAGCTGCTGCTGTTGCAACTGAATCTTCTGCTGCTGTTGCAACTGCATCTTCTGCTGCTGCTGCTGCTGCTGCAACTGCATCTTCTGCTGCTGCTGCAACTG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

175

Start:

25540033  

End:

25540207

Strand:

-

>Chr1_LTR-Ngaro_6

GGAGGAGATTGTAACAAACGTTGTTGTTGTTGTTGGTATTGTTGTTGTTGAATGAATTGTTGCTGTAATTGAAATTGCTGGAATTGCTGAACCTCTTGTGTTGGTGGCTGCAATTGTTGTTGATGAAATTGTTGTTGTTGGAGTTGTTGTTGTTGTTGCTGGAGGAATAGTTGTT

Cardamine hirsuta (v1.0)

ID:

Chr2_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

97

Start:

16257785  

End:

16257881

Strand:

+

>Chr2_LTR-Ngaro_7

CGGCTACTACTTCCACTGCTACTTTGGCCACCACTGCTGCTTACACTTTTGCTACGACCATCACTGTCACTTCCACTGCTGCTTCCACTGCTACTGC

Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

194

Start:

6558975  

End:

6559168

Strand:

-

>Chr3_LTR-Ngaro_8

TGTTGTTGTTGTTGTTATTATTCCCATTGCTGTTGTTATTATCATTCCCATTGCTGTTGTCATTATTATTATTCCCATTGTTGTTGTTATTACCATTGTTTCTACCATCTTTGTTGTTGTTGTCATTGTTGTTATTTCCATTGTTGTTGTCATTGTTGTTATTACCATTATTGTTGCCATCATTGTTATTGTTT

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

88

Start:

1073650  

End:

1073737

Strand:

-

>Chr4_LTR-Ngaro_9

AATAATTAAAATGAAAAATATACGACTTCACTGGGGATCGAACCCAGAATCTCTGGTTTCGTAGACCAGCGCCTTATCCATTGGGCCA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

98

Start:

14407403  

End:

14407500

Strand:

-

>Chr4_LTR-Ngaro_10

GTAGCTCCAGGAGAAGCAGGAGTAGCAGCAGCAGCAGCACGAGTAGCAGCACGAGTAGCAGCAGCAGCAGCAGCTCCAGGAGAAGCAGGAGTAGCAGC

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

18890343  

End:

18890453

Strand:

+

>Chr4_LTR-Ngaro_11

GCTACACAACAACAACAACAACACTAATGCTGGTGGTTTTAGTTACGCGATGAACAACAACACTAATAACAACAACACTAATAACAACAACAACAACCTTCAAGGACAACA

Cardamine hirsuta (v1.0)

ID:

Chr5_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

82

Start:

7769053  

End:

7769134

Strand:

+

>Chr5_LTR-Ngaro_12

ATCCATGGGTTTCTTCCCGGCCAAAACATTCCATCAAGATTTGCGAATGTCCTTATCATCAAGGGATATTCAAGAGGATCAC

Cardamine hirsuta (v1.0)

ID:

Chr5_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

134

Start:

17491710  

End:

17491843

Strand:

+

>Chr5_LTR-Ngaro_13

CCTTGTCGCATCATAAGCCGATCTCTGTCTCGCACTATAAGCCGATCTCAATGTCGCACCATAAGCCGATCTCTTCCTCGCAATATAAGCCGACCTCAATGTCGCACCAAAAGCTGATCTCTTCCTCACAATAT

Cardamine hirsuta (v1.0)

ID:

Chr5_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

89

Start:

21054649  

End:

21054737

Strand:

+

>Chr5_LTR-Ngaro_14

TGGTCTAGTGGTTAGGACATTGGACTCTGAATCCAGTAACCCGAGTTCAAGTCTCGGTGGAACCTTGGATTATTGTATTTTTATTGTTA

Cardamine hirsuta (v1.0)

ID:

Chr6_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

87

Start:

6603839  

End:

6603925

Strand:

+

>Chr6_LTR-Ngaro_15

GGGATTCCTCACTCACAATTTTCGTTTTTCCGCCTCTTGTATAACTACTACTACTACTACTGCTGCTGCTGCTACTGCTACTCATCA

Cardamine hirsuta (v1.0)

ID:

Chr6_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

283

Start:

16966361  

End:

16966643

Strand:

+

>Chr6_LTR-Ngaro_16

CAACAACAGCAGCTGCAGCAATTGTTGCACTCTTCTCTGAACCATCAGCAACAGCAATCACAGTCTCAACAACAACAACAACAACAACAGCAACAACAATTGCTGCTACATCAGCAACAACAACAACAACAACAACAACAACAACAGTTGCTGCAGCAACAACATCAACAACCATTACAGCAACAGAATCAGCAGCTAAGAACGCAACCATCACAATCTCCCTCGCATCCACAGCCACAAGCACAACCACAGCAACAGTCACAGCCACAACAGTTGCAACCAC

Cardamine hirsuta (v1.0)

ID:

Chr6_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

101

Start:

17886083  

End:

17886183

Strand:

-

>Chr6_LTR-Ngaro_17

CATGTATACACACACACACGTACACACTCATATATTCATATGCCACGTAAGAAAACGTATACTCATGACGTGTCCACGTATATATATAACCACGCACACTT

Cardamine hirsuta (v1.0)

ID:

Chr6_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

127

Start:

18307845  

End:

18307971

Strand:

+

>Chr6_LTR-Ngaro_18

CAGCAGCAACAGCAACAGCAACAACAAATCCTCTATCAACAACACCAATTGCAAAATCAACAGCAGCGACAACAACAGTTGCTTCTATTGCAACAATTGCAGAAACAGCAGCAACAACAGCAGCAAC

Cardamine hirsuta (v1.0)

ID:

Chr7_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

5135721  

End:

5135803

Strand:

-

>Chr7_LTR-Ngaro_19

GTTGTCGTTGTTGTATTCATTGTTGTCCTAGTCGTCGTAGTCATCGTCGTCATTGTAGTCGTTATTGTAGTCGTCGTCATCGT

Cardamine hirsuta (v1.0)

ID:

Chr7_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

85

Start:

14943849  

End:

14943933

Strand:

+

>Chr7_LTR-Ngaro_20

GCAATATTTATACCTACGTCTATCTATATATATATATATATATACACACTTTTATATACTCGTAGGTGAATGTATATATATGTAA