Cardamine hirsuta (v1.0)
ID:
C758160_LTR-Copia_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
365Start:
1End:
365Strand:
+>C758160_LTR-Copia_1
CGTCACATTCTCAACGTTGCTCGGTCCTTTATGTTCCAAGCAAACTTACCAAAAAAATTCTGGGGCGAGTGTATCTTAGATGCTGCACATGTCATAAACCGAACTCCCTCCACAGTGCTTGATGGGAAAACTCCTTATGAGATTCTGTATGGAAAACCTCCATCCTATGATATGATAAAAACAATTGGTTGCCTCTGTTTTGCACACAAGTTGACAAGAGATAAAGATAAATTTGGAAAGCGCAGTAGGAAGTGCATATTCATTTGATACACTTATGGAAAAAAGGGTGGAGAGTTTACAATACAGAAAATAATGATTTTTTCGTGTCCCGGGATGTTGAATTTCACGAGAATACGTTTCCGTAT
Cardamine hirsuta (v1.0)
ID:
C758160_LTR-Copia_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
478Start:
598End:
1075Strand:
+>C758160_LTR-Copia_2
CTGTTCGTCTAAAAGGATTTGTTACTTATAAGGCCACAACTATTCCCGATAAACATACACCCATCGTAGCTTATCCTACTCCACCAGCGGTATCCTCGACGGTTCCAGGTAACATCGAGTATCCCATTAATGACTATATCTCTGATGAAAAGTTTTCTGAACAGCATCGGGTATTTCTCGCGGCTGTTAGTGCTGGTGTTGAACCAGTTTTTTACCATGACGCAGTAAAAGATGCTGTGTGGCGAGTTGCAATGGCCAAAGAAATAAAGGCTTTGGAAGACAATGACACATGGATGTTGGTGACACTTCCACAAGGAAAAAGGCTCTTGGCAGCAAATGGATCTATAAGCTAAAGTATAATGCTGATGGTTCTATTGAACGGCACAAGGCACGACTAGAGGTACTAGGTAATCTTCAAGTTGAAGGAAGAGATTTTAATGATACTTTTGCACCTGTGGCGAAAATGACCACTGTTAGA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
205Start:
458320End:
458524Strand:
+>Chr1_LTR-Copia_3
ATTTTAAATTCTGTGAAAGTTTATCAGTTCAAACTTATTCAAGGATGTAATAACTGTTAAAGAAGCTTTGGAAAATACTGCATAAAGCATTCGAATGAACTGCAAGTGTGAAAAGATCTAGACTCAACATGCTGACATGGCAGTTTGAAATTTTAAGAATGGGAGAGACAGAGGAAGTGGAAGAATTATGAGCGAAAATATGCTA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
573Start:
540893End:
541465Strand:
->Chr1_LTR-Copia_4
GATTAGGGATGATGAGATGGCGAGTTTCATCACCAAAATCTACTTTCTTTCTCTCCATAACACTCTCAGTTTGATTTTAACTTAGTGTGAAAGACTTTGAAGCAGAGTATGAAACAGAGAAATAGTTGCAGAGAAAATAAATGTGCAAGATGATATTTTTACGTGTTCAGGTCTCAGTGTGAAACTCTACTCACGCCGGGAAACTTGTGTCCCGGAATCCACTAGAATTAAGTCTTTTATAGACAGCTCTCACTTGAGCTTACAAAACACAAACCACAACTCATACACACTTAAACACATGTCCAAACACACCCTTTCATCTCATCTACTCTCTGTCTCTCGTCTCCTGCTTTTTTCTTCTTTTGTCTAGACAAACTTGCAGGTACAAATGCAGAGCTTCTCTTTTACGGAACAAACAAGTGGCGCCAGCTTGCTTCCTTTGACTTGATGAGATGGGCTTCAACTTTGGTTTGGGCCTTATGTTAACTTTCCAATCAAACACTCTGATTGCTTTAGAGTTTTCTCATGTCTTCCTTTTTCCCCAAAACTGAAACTCGAAGACAAACTCTCACA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
82Start:
930473End:
930554Strand:
+>Chr1_LTR-Copia_5
TAGTTGATTTTCCGGGGAGTCTAAATCCCCGGCGAGATGTAGGGTTTCCACATTGGAGACCTGAACTCGTTAAATTCTTTGT
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
92Start:
1061877End:
1061968Strand:
->Chr1_LTR-Copia_6
AATAAATGAGACAAAGAATTTAACGAGTTCAGGTCTCCAATGTGGAAACCTTACATCTCGCCGGGGATTTAGACTCCCCGGAAAATCCACTA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
103Start:
1212993End:
1213095Strand:
->Chr1_LTR-Copia_7
AATTTATATTTTTGAAAAGTTTCTAATTTGAGAAAGTTTCTAATTTGGGAAATTTTCTATTTTAGGAAAGTTCTTATTTCAAGAAAGTTCATCAACGAAAAGT
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
118Start:
1213538End:
1213655Strand:
+>Chr1_LTR-Copia_8
ATTGTTTCACTCAAATTTTGTACAAAATTATTTCATATAAATTTTGCACGAAATTATTTAATCCGAATTTTGCACATATATAATTGTATCTCGAATTTTGCACGGAACTGTTTTATTC
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
419Start:
1213873End:
1214291Strand:
+>Chr1_LTR-Copia_9
TTTTAAAGATGTCCATAGAAATTGATATCATATTGAGGCTGTGAGCGAAGGAAATGATTAATACCTTCAGATGATAAAGATTATCAAAAGCTCTAATTATTATGGAAAGACTACCCGCATTCTCCACTTGATTGTATTATACTAAGAATAGTACAAATGAGGCAAATGTTAAAGTAAACTAGAAGTTTACTTAGAACCTCCATGATTGGCACGGCCGGTTAGACCATTCCGGTTTGATGATAATGCGAAAAATAATCATGAATTCATATGGAATTTTATTAAAGAACAACATGATTTTTTTTTTATGATATTATATGTGCTCCCTGTTTAGAAGGTAAGCTATCACCAGCCAAGATAAACTCTGGATTGATTATTTTTTCAAGACAGAATACAAAGAAAGTTTATGGATTAATCACCCA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
217Start:
1214360End:
1214576Strand:
+>Chr1_LTR-Copia_10
TGAATTCCATTGGAATAAGTGTTAAACATCTTATAGTTCATGTTCATACACAAGATATTACATGTAGTATCATTGATTCGCATCATGCCAATGAATATTATAAGATATCCCCAAAACAATTGGTTTATGGTCAGGAACCACATATTTCTCANTTGCTCCACCAAAGCAGTCTAAGATGGGACCTCAAATGAGGTTGAGAAAATATGTTGGATATAAA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
672Start:
1214679End:
1215350Strand:
+>Chr1_LTR-Copia_11
ATTTACAAAGTTTAGCGTATCGATTGCCAGACGCTTACTGACCTGAATCTAGTGGTAAAGTCACATATTCCAGTTATGCTGCAATTAAAATTGATGTCTTAGAAGGACTGTATCAACTGCAAATAAGTCTAAAATCGCATAAAGCGTGAGAGACCTATTGGTTCAAAAAGATAAAATTCTCGGAAATTAAAAAGGAACATATATTAAAAATGGTTGAACCGAGGTAGCAAATAATTGTGAATGATCTCGAGAAGAGACATTAGACATGACACATAAAGAAATCCAAGTACTTGGTAGTGATAAAAGATTTCAACTAGTTGAGTCATGTATAGAATAACATGAAACCAGAAAAGCAAATCGACGTCGATAATATTTGTGTATGTAATGTAGCAGTTGATGTAAAGATGAAAATTGAGGATCGTAAACCGCGATATAGAAGTTTATGAAAAGTGTACACAAAGTGATGATTAACCAAAGTGAATGGAAATAAACTCTTGGAGAGATAAATATGTAGACTAGTAGTCCATACACATGAATGTGTAAAATTAGTGGGACAAGAGGAACAATAATTATGATATTATAAGAGATATATAAAGGTTCTGAGAAAAACCTAGAAATCTTCACTGGTGGATGCAACCATGTTTAAGTTCCTAAATAGTCTAGCAGTAAGAG
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
565Start:
1216549End:
1217113Strand:
+>Chr1_LTR-Copia_12
GAAAATATATCATGAGGATGATACTTCCAAGAGAATGAATATGGTTATATGTGTGGTTGTATTTTCCTTTATCATGGTTTTTATCCCATTGGGTTTTTGCATGAAATTTTTTTTAACGAGACAACAAAGAACACACAAATAATAGACACCTAAGAAGAATCCAAATGATAAAGGTGTATCATTGTTTTGAACTATATATTAGACACTAATGAGATCGCCAATAGCAAAAAGAGATGATGATTCAAATGAGTCATTTACGAGACATATGAACTGTAAAAGAACAACGATGTACGTGGAATGAATATTCGTTCAAGTGAAAATTTTACAAGCTTATTTATCAAGGCGCTCCAAACTGTCACTTTCAAGATGTTAGTTCACCAAGATTGGATCGCGTCATCTCAAAGATCAGTGATGTATTCATGAGGAGGAGTAAATGCTCGCTACACTCTTTTTCCCTTAACCATGGTTTTTCCCATTGGGTTTTCCTGGTAAGGTTTTTAATGAGGCAGCATTCATCTCAAACGCATTGGAAACCAACTTTTTATAATAGCCATCCAAAGGGGAG
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
700Start:
1875683End:
1876382Strand:
->Chr1_LTR-Copia_13
TGTTGGGGAAACAACGCACAAAGGCGCAACGGAACAAAGTTTCCCTCACTTATGTGTACCTGTGAAAAAAATATAGAATACTTGAAAACTTCAATGCAAGAAAGTAAACTACACAGCAAATTTTACGTGGAAAACCTCCTCAATGTGAGGAGTAAAAATCACGGGACCGTAGTCCACTCAAAATTCACTATCACCAATGTATTTGAGTTACAACCACGTCCTCCAGAGACTAAGGTTCCAAAGAGCAATCTCCAAAACAAAGAAAACCTTAGAAGAGAGCAATACAAGAGCTAGAAATCAGCAGTTCCAAACGACCCTAAGTTCTCTAAGATTTCGGTCTCCAAATCAGATCTCTACCGGAAAAATCTTAGATAAACAAGTCAAGAACACCGCTGCAAAATATCTGCTCAATCCGAGAAGAACTCACCGTTGGATCTCCCAAACACTCACAACAGATGCTGCAGAAAATCTGGGAATTCCAGACACGACTAGCGACGCTAAAACCCAGATTCCTCTCAAACCACCCGTTGAAATACAATCTCCACCGTTGAATCTAAAGATCACTGAGTCACGAAGCTATACTCCAAATATCAGCAATATCGGAGCTCATTTGACTGTCCAAACGTTCAACACAACAAACCTTAACAGTTCTGTTTCTATTCTCCTTTGTCTCATAAAATTCTCTCTTTTTCTTTTTCTT
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
124Start:
1943990End:
1944113Strand:
->Chr1_LTR-Copia_14
TTCTTGGTTTTTTTTTTTTTTTTATGTACAATAAGACTTATTTCACTGCATGACAGTGATCTATCTATCAGTGGTTTACTCATGTAAATGCTTATCACACCAACTTAGATTAGCCAATCCTAGC
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
1097Start:
1987433End:
1988529Strand:
->Chr1_LTR-Copia_15
TTGTCGATGTCCCCTGCATAATCACTATCAGTGTAGCCCGTGATCTCATCATCACTTCCTCTTGTTTGTACCAAATCCCATATTTCAAATACCGCAGAATCCTATTTGCTGCTGCCAGATGCAGCTCAGTGGGATTTGACATAAAACGGCTAATGAGACTTACCACAAACATAAGATCTGGCCTTGTCGCAGTGAGATACATCAAGCTGCCCACCATTTGCTTGTAAAGAGTAGAATCGACTTTCACACCGAATTATAGTTTTGCATTCCAAACCTCTGGAGTAACTCAGCAGCATACCCTCCTTTGACATATGAAGATACCATCCAGTCTTTGTACCACTTGTATGCCGAGAAAATATCTCATTTTCCCCAAATCTGTCATATCAAACTCTTCCTTCATGGAACTCTTAAACTGATTCATCATCACTAGTGAACAGCAAATCATTAACATAGATGCTAACAATTAGAATTTTACCTCCCTTTTGCTTAATGAATAATGTCTGTTCACTAGAGCTGCTTACAAACCCTTCTTTGATGAAATATGCTTCGATACGACTGGGTGCTTGTTTCAGCCCATAAAGAGCTTTGTGCAGTTTGTAAACCATGTGTTTCTTCCCTGCTACTTGGTACCCTTGTGGTTGCCCCACAAAGACATCTTCCTTCAACTCGCCATGTAAAAATGCCGATTTAACGTCTTAACTGATAGATCCCCCATCCTTTTGGTGCCGCCAGAGCAATGATCATTCTAACAGTATCCATTCGTCTACTCCATATTCTTGTGCATATCCTTTCACCACAAGTCTAGCTTTGAACTTATCCACTTCTCCCACTTCATTAATTTTGGTCTTGTAAATCCATTTCACACCAATCGCCTTAGAAGTGAAGTCAATGACCATGTATGATTCCTTTCAATTGACTTGATTTTGAAAGTTTCACTGCCTCTTGAAAGGATGTGGGATCCGCGATGACCATGAATGCTAAATTTTGAAACTTTCACCATGTTTACCTCTTCTTCTGTATCTGACAAGTCTTCCCCAGAAGTGTAATCTGCAGCCCATATTGGAGGTTTTCTCGTTCTTACACCTGATGTTGTTGCT
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
262Start:
2113466End:
2113727Strand:
->Chr1_LTR-Copia_16
GCTCCAAAGAGAGCCGCATGGATGAGCCAATCTTGTTGTTTCCACCTTTGAAAAGCATGGTTCGGCTTTGTGAGTCCGTTTTCAGTAACGATTGCCGATGGAACTTCAGCGGAGATGTTGATGAAGGCGAGGAGACCATGGCCTTCAAGAAGAAAGCTGGTATGTTGGCTCCAAGTGATGTAGTTTGCCATTGTGAGTTTGGTGACATTGGTCATGTTCAGCGAGAGGATCGGACTTTTTGTGTCACTAGGGTTGAAGACAG
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
263Start:
2123441End:
2123703Strand:
+>Chr1_LTR-Copia_17
ACTAGTTTGGCATGGAAATGTAGAACATGTGAATTGTAAATCTATTCAAAGATTGATTCACTTGAACCTAATTCTGGAATACAAATCAATCAAAGGAAAATGTGAAGTATGTGTATAGACAAAACTCACTAAAATTCCATCACCTCATGTAATAGAGCACCAAACCTCGAGGTTTAATTCACATAGAGCAACCGAACCTCTAAGTTTTATTAGCATAGAAAAAAATATCTTGTGACTTTCATTAATGATTGTACAAAATATTA
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
165Start:
2159629End:
2159793Strand:
->Chr1_LTR-Copia_18
GATCGATCGATCCGCGAGGATTGATCAATCTCCTTCCTTTGATCCGTGCCACCTCATAGATTCATTTGACTGACCGATCTGCTTTGGGATTGGTCGATCCTCGTCATGCTTGGTTGATCCTATTCAGGATCGATCGATCCTCGTCATGCTTGGTTGATCCTATTC
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
134Start:
2163903End:
2164036Strand:
+>Chr1_LTR-Copia_19
AGTTTGAAAATCAGATCCGATCAAGAGGCTTTGGGATCGATCGATCTTGGAAGGGATCGGTCGATCTCGAGAGAAAAGGATCGATTGATCAAAGAAGAATCGATTGATCTTGCACAAAGTAGGATCGGTCGATC
Cardamine hirsuta (v1.0)
ID:
Chr1_LTR-Copia_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CopiaLength:
148Start:
2165139End:
2165286Strand:
->Chr1_LTR-Copia_20
GGATCGATCGATCCGCGAGGATCGATCAATCTCCTTCCTTTGATCCGTGCCACCTCATAGATTCCTTTGACTGACCGATCTGCTTCGGGATCGGTCAATCCTTGTCATGCTTGGTCGATCCTATTCAGGATCGATCGATCCAAGATGT