ID Class Order Superfamily Length Start End Strand View
C758160_LTR-Copia_1 RetrotransposonsLTRLTR-Copia3651365+
C758160_LTR-Copia_2 RetrotransposonsLTRLTR-Copia4785981075+
Chr1_LTR-Copia_3 RetrotransposonsLTRLTR-Copia205458320458524+
Chr1_LTR-Copia_4 RetrotransposonsLTRLTR-Copia573540893541465-
Chr1_LTR-Copia_5 RetrotransposonsLTRLTR-Copia82930473930554+
Chr1_LTR-Copia_6 RetrotransposonsLTRLTR-Copia9210618771061968-
Chr1_LTR-Copia_7 RetrotransposonsLTRLTR-Copia10312129931213095-
Chr1_LTR-Copia_8 RetrotransposonsLTRLTR-Copia11812135381213655+
Chr1_LTR-Copia_9 RetrotransposonsLTRLTR-Copia41912138731214291+
Chr1_LTR-Copia_10 RetrotransposonsLTRLTR-Copia21712143601214576+
Chr1_LTR-Copia_11 RetrotransposonsLTRLTR-Copia67212146791215350+
Chr1_LTR-Copia_12 RetrotransposonsLTRLTR-Copia56512165491217113+
Chr1_LTR-Copia_13 RetrotransposonsLTRLTR-Copia70018756831876382-
Chr1_LTR-Copia_14 RetrotransposonsLTRLTR-Copia12419439901944113-
Chr1_LTR-Copia_15 RetrotransposonsLTRLTR-Copia109719874331988529-
Chr1_LTR-Copia_16 RetrotransposonsLTRLTR-Copia26221134662113727-
Chr1_LTR-Copia_17 RetrotransposonsLTRLTR-Copia26321234412123703+
Chr1_LTR-Copia_18 RetrotransposonsLTRLTR-Copia16521596292159793-
Chr1_LTR-Copia_19 RetrotransposonsLTRLTR-Copia13421639032164036+
Chr1_LTR-Copia_20 RetrotransposonsLTRLTR-Copia14821651392165286-

< 1 2 3 4 5 > Total 680


Cardamine hirsuta (v1.0)

ID:

C758160_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

365

Start:

1  

End:

365

Strand:

+

>C758160_LTR-Copia_1

CGTCACATTCTCAACGTTGCTCGGTCCTTTATGTTCCAAGCAAACTTACCAAAAAAATTCTGGGGCGAGTGTATCTTAGATGCTGCACATGTCATAAACCGAACTCCCTCCACAGTGCTTGATGGGAAAACTCCTTATGAGATTCTGTATGGAAAACCTCCATCCTATGATATGATAAAAACAATTGGTTGCCTCTGTTTTGCACACAAGTTGACAAGAGATAAAGATAAATTTGGAAAGCGCAGTAGGAAGTGCATATTCATTTGATACACTTATGGAAAAAAGGGTGGAGAGTTTACAATACAGAAAATAATGATTTTTTCGTGTCCCGGGATGTTGAATTTCACGAGAATACGTTTCCGTAT

Cardamine hirsuta (v1.0)

ID:

C758160_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

478

Start:

598  

End:

1075

Strand:

+

>C758160_LTR-Copia_2

CTGTTCGTCTAAAAGGATTTGTTACTTATAAGGCCACAACTATTCCCGATAAACATACACCCATCGTAGCTTATCCTACTCCACCAGCGGTATCCTCGACGGTTCCAGGTAACATCGAGTATCCCATTAATGACTATATCTCTGATGAAAAGTTTTCTGAACAGCATCGGGTATTTCTCGCGGCTGTTAGTGCTGGTGTTGAACCAGTTTTTTACCATGACGCAGTAAAAGATGCTGTGTGGCGAGTTGCAATGGCCAAAGAAATAAAGGCTTTGGAAGACAATGACACATGGATGTTGGTGACACTTCCACAAGGAAAAAGGCTCTTGGCAGCAAATGGATCTATAAGCTAAAGTATAATGCTGATGGTTCTATTGAACGGCACAAGGCACGACTAGAGGTACTAGGTAATCTTCAAGTTGAAGGAAGAGATTTTAATGATACTTTTGCACCTGTGGCGAAAATGACCACTGTTAGA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

205

Start:

458320  

End:

458524

Strand:

+

>Chr1_LTR-Copia_3

ATTTTAAATTCTGTGAAAGTTTATCAGTTCAAACTTATTCAAGGATGTAATAACTGTTAAAGAAGCTTTGGAAAATACTGCATAAAGCATTCGAATGAACTGCAAGTGTGAAAAGATCTAGACTCAACATGCTGACATGGCAGTTTGAAATTTTAAGAATGGGAGAGACAGAGGAAGTGGAAGAATTATGAGCGAAAATATGCTA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

573

Start:

540893  

End:

541465

Strand:

-

>Chr1_LTR-Copia_4

GATTAGGGATGATGAGATGGCGAGTTTCATCACCAAAATCTACTTTCTTTCTCTCCATAACACTCTCAGTTTGATTTTAACTTAGTGTGAAAGACTTTGAAGCAGAGTATGAAACAGAGAAATAGTTGCAGAGAAAATAAATGTGCAAGATGATATTTTTACGTGTTCAGGTCTCAGTGTGAAACTCTACTCACGCCGGGAAACTTGTGTCCCGGAATCCACTAGAATTAAGTCTTTTATAGACAGCTCTCACTTGAGCTTACAAAACACAAACCACAACTCATACACACTTAAACACATGTCCAAACACACCCTTTCATCTCATCTACTCTCTGTCTCTCGTCTCCTGCTTTTTTCTTCTTTTGTCTAGACAAACTTGCAGGTACAAATGCAGAGCTTCTCTTTTACGGAACAAACAAGTGGCGCCAGCTTGCTTCCTTTGACTTGATGAGATGGGCTTCAACTTTGGTTTGGGCCTTATGTTAACTTTCCAATCAAACACTCTGATTGCTTTAGAGTTTTCTCATGTCTTCCTTTTTCCCCAAAACTGAAACTCGAAGACAAACTCTCACA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

82

Start:

930473  

End:

930554

Strand:

+

>Chr1_LTR-Copia_5

TAGTTGATTTTCCGGGGAGTCTAAATCCCCGGCGAGATGTAGGGTTTCCACATTGGAGACCTGAACTCGTTAAATTCTTTGT

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

92

Start:

1061877  

End:

1061968

Strand:

-

>Chr1_LTR-Copia_6

AATAAATGAGACAAAGAATTTAACGAGTTCAGGTCTCCAATGTGGAAACCTTACATCTCGCCGGGGATTTAGACTCCCCGGAAAATCCACTA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

103

Start:

1212993  

End:

1213095

Strand:

-

>Chr1_LTR-Copia_7

AATTTATATTTTTGAAAAGTTTCTAATTTGAGAAAGTTTCTAATTTGGGAAATTTTCTATTTTAGGAAAGTTCTTATTTCAAGAAAGTTCATCAACGAAAAGT

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

118

Start:

1213538  

End:

1213655

Strand:

+

>Chr1_LTR-Copia_8

ATTGTTTCACTCAAATTTTGTACAAAATTATTTCATATAAATTTTGCACGAAATTATTTAATCCGAATTTTGCACATATATAATTGTATCTCGAATTTTGCACGGAACTGTTTTATTC

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

419

Start:

1213873  

End:

1214291

Strand:

+

>Chr1_LTR-Copia_9

TTTTAAAGATGTCCATAGAAATTGATATCATATTGAGGCTGTGAGCGAAGGAAATGATTAATACCTTCAGATGATAAAGATTATCAAAAGCTCTAATTATTATGGAAAGACTACCCGCATTCTCCACTTGATTGTATTATACTAAGAATAGTACAAATGAGGCAAATGTTAAAGTAAACTAGAAGTTTACTTAGAACCTCCATGATTGGCACGGCCGGTTAGACCATTCCGGTTTGATGATAATGCGAAAAATAATCATGAATTCATATGGAATTTTATTAAAGAACAACATGATTTTTTTTTTATGATATTATATGTGCTCCCTGTTTAGAAGGTAAGCTATCACCAGCCAAGATAAACTCTGGATTGATTATTTTTTCAAGACAGAATACAAAGAAAGTTTATGGATTAATCACCCA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

217

Start:

1214360  

End:

1214576

Strand:

+

>Chr1_LTR-Copia_10

TGAATTCCATTGGAATAAGTGTTAAACATCTTATAGTTCATGTTCATACACAAGATATTACATGTAGTATCATTGATTCGCATCATGCCAATGAATATTATAAGATATCCCCAAAACAATTGGTTTATGGTCAGGAACCACATATTTCTCANTTGCTCCACCAAAGCAGTCTAAGATGGGACCTCAAATGAGGTTGAGAAAATATGTTGGATATAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

672

Start:

1214679  

End:

1215350

Strand:

+

>Chr1_LTR-Copia_11

ATTTACAAAGTTTAGCGTATCGATTGCCAGACGCTTACTGACCTGAATCTAGTGGTAAAGTCACATATTCCAGTTATGCTGCAATTAAAATTGATGTCTTAGAAGGACTGTATCAACTGCAAATAAGTCTAAAATCGCATAAAGCGTGAGAGACCTATTGGTTCAAAAAGATAAAATTCTCGGAAATTAAAAAGGAACATATATTAAAAATGGTTGAACCGAGGTAGCAAATAATTGTGAATGATCTCGAGAAGAGACATTAGACATGACACATAAAGAAATCCAAGTACTTGGTAGTGATAAAAGATTTCAACTAGTTGAGTCATGTATAGAATAACATGAAACCAGAAAAGCAAATCGACGTCGATAATATTTGTGTATGTAATGTAGCAGTTGATGTAAAGATGAAAATTGAGGATCGTAAACCGCGATATAGAAGTTTATGAAAAGTGTACACAAAGTGATGATTAACCAAAGTGAATGGAAATAAACTCTTGGAGAGATAAATATGTAGACTAGTAGTCCATACACATGAATGTGTAAAATTAGTGGGACAAGAGGAACAATAATTATGATATTATAAGAGATATATAAAGGTTCTGAGAAAAACCTAGAAATCTTCACTGGTGGATGCAACCATGTTTAAGTTCCTAAATAGTCTAGCAGTAAGAG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

565

Start:

1216549  

End:

1217113

Strand:

+

>Chr1_LTR-Copia_12

GAAAATATATCATGAGGATGATACTTCCAAGAGAATGAATATGGTTATATGTGTGGTTGTATTTTCCTTTATCATGGTTTTTATCCCATTGGGTTTTTGCATGAAATTTTTTTTAACGAGACAACAAAGAACACACAAATAATAGACACCTAAGAAGAATCCAAATGATAAAGGTGTATCATTGTTTTGAACTATATATTAGACACTAATGAGATCGCCAATAGCAAAAAGAGATGATGATTCAAATGAGTCATTTACGAGACATATGAACTGTAAAAGAACAACGATGTACGTGGAATGAATATTCGTTCAAGTGAAAATTTTACAAGCTTATTTATCAAGGCGCTCCAAACTGTCACTTTCAAGATGTTAGTTCACCAAGATTGGATCGCGTCATCTCAAAGATCAGTGATGTATTCATGAGGAGGAGTAAATGCTCGCTACACTCTTTTTCCCTTAACCATGGTTTTTCCCATTGGGTTTTCCTGGTAAGGTTTTTAATGAGGCAGCATTCATCTCAAACGCATTGGAAACCAACTTTTTATAATAGCCATCCAAAGGGGAG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

700

Start:

1875683  

End:

1876382

Strand:

-

>Chr1_LTR-Copia_13

TGTTGGGGAAACAACGCACAAAGGCGCAACGGAACAAAGTTTCCCTCACTTATGTGTACCTGTGAAAAAAATATAGAATACTTGAAAACTTCAATGCAAGAAAGTAAACTACACAGCAAATTTTACGTGGAAAACCTCCTCAATGTGAGGAGTAAAAATCACGGGACCGTAGTCCACTCAAAATTCACTATCACCAATGTATTTGAGTTACAACCACGTCCTCCAGAGACTAAGGTTCCAAAGAGCAATCTCCAAAACAAAGAAAACCTTAGAAGAGAGCAATACAAGAGCTAGAAATCAGCAGTTCCAAACGACCCTAAGTTCTCTAAGATTTCGGTCTCCAAATCAGATCTCTACCGGAAAAATCTTAGATAAACAAGTCAAGAACACCGCTGCAAAATATCTGCTCAATCCGAGAAGAACTCACCGTTGGATCTCCCAAACACTCACAACAGATGCTGCAGAAAATCTGGGAATTCCAGACACGACTAGCGACGCTAAAACCCAGATTCCTCTCAAACCACCCGTTGAAATACAATCTCCACCGTTGAATCTAAAGATCACTGAGTCACGAAGCTATACTCCAAATATCAGCAATATCGGAGCTCATTTGACTGTCCAAACGTTCAACACAACAAACCTTAACAGTTCTGTTTCTATTCTCCTTTGTCTCATAAAATTCTCTCTTTTTCTTTTTCTT

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

124

Start:

1943990  

End:

1944113

Strand:

-

>Chr1_LTR-Copia_14

TTCTTGGTTTTTTTTTTTTTTTTATGTACAATAAGACTTATTTCACTGCATGACAGTGATCTATCTATCAGTGGTTTACTCATGTAAATGCTTATCACACCAACTTAGATTAGCCAATCCTAGC

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1097

Start:

1987433  

End:

1988529

Strand:

-

>Chr1_LTR-Copia_15

TTGTCGATGTCCCCTGCATAATCACTATCAGTGTAGCCCGTGATCTCATCATCACTTCCTCTTGTTTGTACCAAATCCCATATTTCAAATACCGCAGAATCCTATTTGCTGCTGCCAGATGCAGCTCAGTGGGATTTGACATAAAACGGCTAATGAGACTTACCACAAACATAAGATCTGGCCTTGTCGCAGTGAGATACATCAAGCTGCCCACCATTTGCTTGTAAAGAGTAGAATCGACTTTCACACCGAATTATAGTTTTGCATTCCAAACCTCTGGAGTAACTCAGCAGCATACCCTCCTTTGACATATGAAGATACCATCCAGTCTTTGTACCACTTGTATGCCGAGAAAATATCTCATTTTCCCCAAATCTGTCATATCAAACTCTTCCTTCATGGAACTCTTAAACTGATTCATCATCACTAGTGAACAGCAAATCATTAACATAGATGCTAACAATTAGAATTTTACCTCCCTTTTGCTTAATGAATAATGTCTGTTCACTAGAGCTGCTTACAAACCCTTCTTTGATGAAATATGCTTCGATACGACTGGGTGCTTGTTTCAGCCCATAAAGAGCTTTGTGCAGTTTGTAAACCATGTGTTTCTTCCCTGCTACTTGGTACCCTTGTGGTTGCCCCACAAAGACATCTTCCTTCAACTCGCCATGTAAAAATGCCGATTTAACGTCTTAACTGATAGATCCCCCATCCTTTTGGTGCCGCCAGAGCAATGATCATTCTAACAGTATCCATTCGTCTACTCCATATTCTTGTGCATATCCTTTCACCACAAGTCTAGCTTTGAACTTATCCACTTCTCCCACTTCATTAATTTTGGTCTTGTAAATCCATTTCACACCAATCGCCTTAGAAGTGAAGTCAATGACCATGTATGATTCCTTTCAATTGACTTGATTTTGAAAGTTTCACTGCCTCTTGAAAGGATGTGGGATCCGCGATGACCATGAATGCTAAATTTTGAAACTTTCACCATGTTTACCTCTTCTTCTGTATCTGACAAGTCTTCCCCAGAAGTGTAATCTGCAGCCCATATTGGAGGTTTTCTCGTTCTTACACCTGATGTTGTTGCT

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

262

Start:

2113466  

End:

2113727

Strand:

-

>Chr1_LTR-Copia_16

GCTCCAAAGAGAGCCGCATGGATGAGCCAATCTTGTTGTTTCCACCTTTGAAAAGCATGGTTCGGCTTTGTGAGTCCGTTTTCAGTAACGATTGCCGATGGAACTTCAGCGGAGATGTTGATGAAGGCGAGGAGACCATGGCCTTCAAGAAGAAAGCTGGTATGTTGGCTCCAAGTGATGTAGTTTGCCATTGTGAGTTTGGTGACATTGGTCATGTTCAGCGAGAGGATCGGACTTTTTGTGTCACTAGGGTTGAAGACAG

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

263

Start:

2123441  

End:

2123703

Strand:

+

>Chr1_LTR-Copia_17

ACTAGTTTGGCATGGAAATGTAGAACATGTGAATTGTAAATCTATTCAAAGATTGATTCACTTGAACCTAATTCTGGAATACAAATCAATCAAAGGAAAATGTGAAGTATGTGTATAGACAAAACTCACTAAAATTCCATCACCTCATGTAATAGAGCACCAAACCTCGAGGTTTAATTCACATAGAGCAACCGAACCTCTAAGTTTTATTAGCATAGAAAAAAATATCTTGTGACTTTCATTAATGATTGTACAAAATATTA

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

165

Start:

2159629  

End:

2159793

Strand:

-

>Chr1_LTR-Copia_18

GATCGATCGATCCGCGAGGATTGATCAATCTCCTTCCTTTGATCCGTGCCACCTCATAGATTCATTTGACTGACCGATCTGCTTTGGGATTGGTCGATCCTCGTCATGCTTGGTTGATCCTATTCAGGATCGATCGATCCTCGTCATGCTTGGTTGATCCTATTC

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

134

Start:

2163903  

End:

2164036

Strand:

+

>Chr1_LTR-Copia_19

AGTTTGAAAATCAGATCCGATCAAGAGGCTTTGGGATCGATCGATCTTGGAAGGGATCGGTCGATCTCGAGAGAAAAGGATCGATTGATCAAAGAAGAATCGATTGATCTTGCACAAAGTAGGATCGGTCGATC

Cardamine hirsuta (v1.0)

ID:

Chr1_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

148

Start:

2165139  

End:

2165286

Strand:

-

>Chr1_LTR-Copia_20

GGATCGATCGATCCGCGAGGATCGATCAATCTCCTTCCTTTGATCCGTGCCACCTCATAGATTCCTTTGACTGACCGATCTGCTTCGGGATCGGTCAATCCTTGTCATGCTTGGTCGATCCTATTCAGGATCGATCGATCCAAGATGT