TBGR-Browse-Chi-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
Chr1_LINE_1	Retrotransposons	LINE	LINE	109	10250794	10250902	+
Chr1_LINE_2	Retrotransposons	LINE	LINE	108	20636635	20636742	-
Chr2_LINE_3	Retrotransposons	LINE	LINE	104	3598407	3598510	+
Chr2_LINE_4	Retrotransposons	LINE	LINE	108	13319642	13319749	-
Chr3_LINE_5	Retrotransposons	LINE	LINE	85	4853091	4853175	+
Chr3_LINE_6	Retrotransposons	LINE	LINE	91	8974927	8975017	+
Chr3_LINE_7	Retrotransposons	LINE	LINE	197	17815638	17815834	-
Chr3_LINE_8	Retrotransposons	LINE	LINE	108	22737489	22737596	+
Chr4_LINE_9	Retrotransposons	LINE	LINE	294	22725703	22725996	+
Chr5_LINE_10	Retrotransposons	LINE	LINE	116	1981602	1981717	+
Chr5_LINE_11	Retrotransposons	LINE	LINE	110	4627977	4628086	-
Chr5_LINE_12	Retrotransposons	LINE	LINE	85	14932753	14932837	+
Chr5_LINE_13	Retrotransposons	LINE	LINE	167	15469793	15469959	+
Chr6_LINE_14	Retrotransposons	LINE	LINE	122	840000	840121	-
Chr6_LINE_15	Retrotransposons	LINE	LINE	113	10582517	10582629	-
Chr7_LINE_16	Retrotransposons	LINE	LINE	173	3649815	3649987	-
Chr8_LINE_17	Retrotransposons	LINE	LINE	90	11185531	11185620	+
Chr8_LINE_18	Retrotransposons	LINE	LINE	154	12211582	12211735	-
NSCAFA.174I_LINE_19	Retrotransposons	LINE	LINE	119	283840	283958	-

Cardamine hirsuta (v1.0)

ID:

Chr1_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

10250794

End:

10250902

Strand:

+

>Chr1_LINE_1

TTTCTGTAGATTTTTGGTCTTTCCGTCTTTTTCTTTATCTCTGTAACTTCTGTCACAAACTAAAATTAGTATAAAATCTAACATTGTTTGCCAATAATAATAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr1_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

20636635

End:

20636742

Strand:

-

>Chr1_LINE_2

TCTTTATTTTTTTGGTACACATGTTAAGATTATATTTTACCGATTTTGGGTTTTTGACAGAATTACAGAGATAACAAGAATTAAAAGAAGAACGAAAACTACAGAAAA

Cardamine hirsuta (v1.0)

ID:

Chr2_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

3598407

End:

3598510

Strand:

+

>Chr2_LINE_3

TTTCTGTAGTTTTTGATCATTATGATTTCCTTGTTATCCCTATAATTTCTGTCTCAAACTTTAAAATGATATCAAATTAACATTTATATCCAAAAAAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr2_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

13319642

End:

13319749

Strand:

-

>Chr2_LINE_4

TTTTTTTTTTTTCGGTAACATGTTAAGATTTATTCATTACCGTTTTCAACTTTTTGACAGAATACAGAGGGAACTAGAAGCAGAAAAAGACCGAAAAACTACAGAAAA

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

4853091

End:

4853175

Strand:

+

>Chr3_LINE_5

TCTGCTTTTTTATTATCTCCGTAATTTCTGTCACAATTTAAAACTGATAATAAAATTTTAACATTGTTTGCCAAAAAAAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

8974927

End:

8975017

Strand:

+

>Chr3_LINE_6

AGCTCGTATAAATAAGGATGAGAACTTCAGTTTCTTTGGGATTGTGGCATCAATGCTATTGTCCGAGTTTTTGTGCTTGGAATTGGTGTTT

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

197

Start:

17815638

End:

17815834

Strand:

-

>Chr3_LINE_7

CGAAGAAGAAACACTTATTATGAATAGTGAAACTCGGATACTCGCGTGGTTGGCACAGCTCTGAAGAGCTCGAGTTCTCATCGTTGGTAGCAACAAGCAATACCCATCTGAGGCCACCCTCAAAACCTCTAATAAGCACTCCTACAACTTCTCCAAAGACTATGCAAAAACAGAACTACTACAGCGGACTAATACAC

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

22737489

End:

22737596

Strand:

+

>Chr3_LINE_8

TGTTTTATGTACTGTAGTTTTGGTATCTCTGATCTCTTTGTAATCTCTGTATTCTGTCAAAAATCAAAAATGGTATAAAATCTTAACATTATTACCAACAACAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr4_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

294

Start:

22725703

End:

22725996

Strand:

+

>Chr4_LINE_9

GTTGAAGGCTCTTTGAAAGGTTTACTCGTGACAACGACGATGAGGATTCCAATTCTTCGGAAATGTGGCATCATTGCAAATTTCGAGTGTTAATGCTCAAAATTGGTGTTTTGGCGAGGATTTTTCTGTTGCTTACACGTATACTTTCACAATTATATTATTTGGTCCGTCTTTCTGTTATATTTTAACCGTTTTTGTAGTTTTACGGTTTTTTTTTGTCTTTTCATCCATGTAACTTCGATCACAAATTAAAAATAGTATACAATTTTAACATTTACACCCAACAAGAAACAA

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

116

Start:

1981602

End:

1981717

Strand:

+

>Chr5_LINE_10

TGTTGCCTTCATGTTTCTGTAGTTTTGGTCTTTCCGTCTTCTCGTCGTCTCTGTAATTTCTGTCAAAAATCTTAAAATGGTATAAAATTTTAACATTTAAACCAAAAAAAGAAGAA

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

110

Start:

4627977

End:

4628086

Strand:

-

>Chr5_LINE_11

TTTTTTTTTTTTGATAAAAATGTTAATATATTTATCGTTTTAAATTTGTGACAGCGGTTACAAAGATACAAAAAGAGGAGGAAAAACAAAATCTACGAAAATAAAAACGA

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

14932753

End:

14932837

Strand:

+

>Chr5_LINE_12

TCCGTTTCCTTAGTTAATCTTTGTAATTCTGTCAAAAGTTTTAAAATAGTATAAATATGTAACATGTTTATTAAGAACAAAAAAA

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

167

Start:

15469793

End:

15469959

Strand:

+

>Chr5_LINE_13

GTTAGTCTTCAGAGAATTTGTAGGTTGTGTTCATTTCAGAAGTTTTGAGGGTGGCTTATGGTGTGAATTGTTCGTGGCAATGACGATAATGGACTTGAGTTATTCAGAGCTGTGACAATCACGTGAATATCTGAATTTTGCGGTTTGAAATTGGTGTTTATTCTTCG

Cardamine hirsuta (v1.0)

ID:

Chr6_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

122

Start:

840000

End:

840121

Strand:

-

>Chr6_LINE_14

TTTTTTTTTTTTTTGTAAAATGTTAATATTGTATACCATTTTTACGTTTTTTTTACAGAAGTTAAGAGACAACCAAATAACGAAAAAGATTGAAAACTACAAAAACAGCTGATGAAAAACAA

Cardamine hirsuta (v1.0)

ID:

Chr6_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

113

Start:

10582517

End:

10582629

Strand:

-

>Chr6_LINE_15

TTTTTTTTTTGTTGATATAAATGTTAATTTGATATCATTTTAAAATTTGAGACAGAAGTTAGAGGGATAACAAAGAAATCAAAATGACATAAAACTACAAAAATAAATAACAA

Cardamine hirsuta (v1.0)

ID:

Chr7_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

173

Start:

3649815

End:

3649987

Strand:

-

>Chr7_LINE_16

GAAGAAGAAACACTTATTCCGAGCGGTGAGGCTTCGACAATCGCGTGATTGCCACAGCTCTTAAGAGCTTGAGTCCTCATCGTCGTTGCCACGAGCAATCCCCACCCGAGGCCACCCTCAAACCCTCAGAAACGAGCACGCCTACAGCTTCTCCGACGACTAAGCCAAAAATG

Cardamine hirsuta (v1.0)

ID:

Chr8_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

90

Start:

11185531

End:

11185620

Strand:

+

>Chr8_LINE_17

GCTCGTAGCAATGGCGATGAGGATTCGAGTTCTTTGAAGCTGAGGCAAGCATGCAAATGTCTTAACTTCGCGGTTTGAAATCCAAGTTTC

Cardamine hirsuta (v1.0)

ID:

Chr8_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

154

Start:

12211582

End:

12211735

Strand:

-

>Chr8_LINE_18

ATTTGCGTGATTGTCGCAGCTCCAAAGAACTTGAGCCATCATCGTTGTTGCTCCGAGAAATCTCTATCCGAAGCCAGACCTCAAAACCTTAGAAATAGTGGCGATACAGCTTCTCCGAGAGCTAACACAAAGCCGGAGACGCTCATGAGCTCCT

Cardamine hirsuta (v1.0)

ID:

NSCAFA.174I_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

119

Start:

283840

End:

283958

Strand:

-

>NSCAFA.174I_LINE_19

TTTTTTATGTTATAATGTTAAATTGTGTATCATTTTAAATTTTTTGACAAAAGTTTACATAGGTAACAAGAAGATGAAAAGACCAAAACTATAGAGAAAACTAACTAACAACATGACCA