TBGR-Browse-Chi-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
Chr2_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	114	3453534	3453647	-
Chr2_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	162	8544465	8544626	-
Chr3_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	86	17725803	17725888	-
Chr3_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	100	21464610	21464709	+
Chr4_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	87	852673	852759	-
Chr4_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	219	11154200	11154418	+
Chr4_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	183	12108597	12108779	+
Chr5_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	227	9565840	9566066	+
Chr5_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	87	20987389	20987475	-
Chr6_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	88	3393984	3394071	-
Chr6_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	88	9471448	9471535	+
Chr6_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	110	9554486	9554595	-
Chr8_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	215	12778395	12778609	-
Chr8_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	100	14431274	14431373	-
NSCAFC.115_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	84	134442	134525	+

Cardamine hirsuta (v1.0)

ID:

Chr2_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

114

Start:

3453534

End:

3453647

Strand:

-

>Chr2_LINE-L1-Tx1_1

TGACACAAATGCTGACTGGGTCTCAGATATGGTAGATGGGAGAATAAGCTTTAATATGTTGGCCATAACTTTAGAGATGATTTTGTAGACCACATTACACATACTTATCGGACG

Cardamine hirsuta (v1.0)

ID:

Chr2_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

162

Start:

8544465

End:

8544626

Strand:

-

>Chr2_LINE-L1-Tx1_2

GCCTTCCAGGAATAAAAGCACTATGATTCTCTGTAAGAATTTTATGTAGCCACGGTTTTAGCCTATTGGCTAGGACTTTAGAAATGATTTTATATGCAACATTTGATAAGCTGATAGTCCTGAAATCCTTAAGGGTGGTAGGGGAGTCTTTCTTGGGCAGTA

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

17725803

End:

17725888

Strand:

-

>Chr3_LINE-L1-Tx1_3

TTTAGATAGTACATTCATGGCTATACCAAAAAGATAAGGAGATAAGGGGTCTCCTTGTCTGATCCCTCTTGAACCCTTAAAGTACC

Cardamine hirsuta (v1.0)

ID:

Chr3_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

100

Start:

21464610

End:

21464709

Strand:

+

>Chr3_LINE-L1-Tx1_4

TTTCGAAAGTCCTTACTAAGAGATTGAAGTTTGTGCTACCTCAGATTATTTCTCCTGAGCAAACAGCATTTGTTCCTGGTAGACATATCACTGATAATGT

Cardamine hirsuta (v1.0)

ID:

Chr4_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

852673

End:

852759

Strand:

-

>Chr4_LINE-L1-Tx1_5

TTGATCCAAGATATGAAAGTATTAGGGAGATCAAAAGCCCGCAGGATGTTAAGTAAAAAGGACCAGTCCAAACTATCATAAGCTTTC

Cardamine hirsuta (v1.0)

ID:

Chr4_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

219

Start:

11154200

End:

11154418

Strand:

+

>Chr4_LINE-L1-Tx1_6

GAGTTTTACAAGGCCACTTGGGATATTATCGGAACTGAATTTGTGACAGCGGTCCAATCTTTTTCGCAAAAGGTTTCCTTCCAAAAGGTATCAACTCAACTATTTTAGCTCTTATCCCAAAAAAAAACAGAGGCAGTGGAGATGAAAGATTATAGGCCAATCTCTTGTTGCAATGTGATTTACAAGGTGATATCAAAACTTATAGCCAATAGGCTGAAG

Cardamine hirsuta (v1.0)

ID:

Chr4_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

183

Start:

12108597

End:

12108779

Strand:

+

>Chr4_LINE-L1-Tx1_7

TGCTTCCTAAGCTTTAAGGCCTGCGGAAGATGAATGATTACCGCCCAATAAGTTTGACTAATGTTTCGTATAAGATTATTTCAAAGGTCCTTACTAAGAGATTGAAATCGGTGCTACCACAGATCATTTCTCCAGAGCAAACAGCTTTTGTTCCTGGTAGACATATTACAGATAATGTTTATT

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

227

Start:

9565840

End:

9566066

Strand:

+

>Chr5_LINE-L1-Tx1_8

GATTTTTACAAGGCCACTTGGGATATTATCGGAACTGAATTTGTGACAGCGGTCCAATCTTTTTTCGCAAAAGGTTTCCTTCCAAAAGGTATCAACTCAACTATTTTAGCTCTTATCCCGAAAAAAACAGAGGCAGTGGAGATGAAAGATTATAGGCCAATCTCTTATTGCAATGTGATTTACAAGGTGATATCAAAACTTATAGCAAATAGGCTGAAGATGGTTCT

Cardamine hirsuta (v1.0)

ID:

Chr5_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

20987389

End:

20987475

Strand:

-

>Chr5_LINE-L1-Tx1_9

GAGCGACAAAGAGAGAGAGAAAGATTCACAAGTTGCTTACTTTATTTTACTCCACAGTTTTTTTTTTTTTTTTAAGACAGCAGTTTC

Cardamine hirsuta (v1.0)

ID:

Chr6_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

3393984

End:

3394071

Strand:

-

>Chr6_LINE-L1-Tx1_10

AATTTGGGGAGTACCAGCTTCAATCTATTCGCTAGAATTTTGGATACAACCTTGTATATGACATTGCAACATGATATTGGCCGATAAT

Cardamine hirsuta (v1.0)

ID:

Chr6_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

9471448

End:

9471535

Strand:

+

>Chr6_LINE-L1-Tx1_11

CCTCGTTGGAGATGTAAGTATGTAATTTTTTAATAAAAGTTTGTTTTGATAAAAATAGTGTTCTCTTTCTCTCTCTCTCTCTCTCTCT

Cardamine hirsuta (v1.0)

ID:

Chr6_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

9554486

End:

9554595

Strand:

-

>Chr6_LINE-L1-Tx1_12

ATATTATCAGAGATAATTCTACCTGAGACAAAAGCACCTTGAGTTTCAGAAACTATCTCAGGTAGAAATCCTTTTAGTCTTGTCGCCAAAACTCTTGACACTATTTTGTA

Cardamine hirsuta (v1.0)

ID:

Chr8_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

215

Start:

12778395

End:

12778609

Strand:

-

>Chr8_LINE-L1-Tx1_13

CTTTTAGTCTATTCGCCAACATTTTTGATATCACCTTATACATAACATTACAACAGAAGATTGGTCTGTAATCTTTCATGAGCTTTGCATCTTCTTTCTTCGGAATCAGAGCAAGGATGGTGGTGTTGACCCCTTTTGGGAGAAACCCTTATATAAAAAAATATTGAATCACAACTGTAAAATCTTTCCCTATCACTGGCCAAGCACTTGTAAAA

Cardamine hirsuta (v1.0)

ID:

Chr8_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

100

Start:

14431274

End:

14431373

Strand:

-

>Chr8_LINE-L1-Tx1_14

TTTTTTTTTTTTTTTTTTTTTGTCATCTAAAGTTTTATTGATAGTAAAGGTCAAATTACAAACATGGAAGTCATCGGTAAGGGATAGAACATATGAGTGT

Cardamine hirsuta (v1.0)

ID:

NSCAFC.115_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

134442

End:

134525

Strand:

+

>NSCAFC.115_LINE-L1-Tx1_15

TTTTTCCCTTTCTGCATTCTTGAGATGAGATATCAACACCTCTGTACAAAGAATGAATAGATACGGGGAAAGGGAGTCACCTTG