Capsella grandiflora (v1.1)
ID:
Scaffold12134_SINE_1Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
148Start:
2754End:
2901Strand:
->Scaffold12134_SINE_1
CTTGACATCAATTCTAAGGCTAGAGCTCGCAAACCCCGCCGCAAATGGTCACTGAGATCAAACCCAACTCGGAACTTTCCTTTTGGAAAAGGAAGATCCGTCACAACCAGAGATCCAATAGCTTCTTCTCCCCGACCTAGCAAAAAGA
Capsella grandiflora (v1.1)
ID:
Scaffold12134_SINE_2Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
194Start:
9514End:
9707Strand:
->Scaffold12134_SINE_2
agcaaggacggctcgtttgcgactgagacttgacatcaattcttaggctagagctcgcgAACCCCACCGCAAACTGTCACTGAGATCGAACCCAACCCAGAACTTTTCTTTTGGAAGAGGAAGATCCGCCACAACCAGAGATCCAATAGCTTCTTCTCCCCGACCTTGCAAAAAGAAGCCTCGCAACAAACCCT
Capsella grandiflora (v1.1)
ID:
Scaffold16851_SINE_3Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
304Start:
248End:
551Strand:
->Scaffold16851_SINE_3
aaGGATACCCGTGGCTAGCCATCAATGATCTGGTTACATATAAACCGTTAATCTGTTCGCAAAGTGGTGAACCTACCGGTCTAAAGCTTAACTTCCATCGCAAGTAAGATCTACCGCTCACAAGccacttggccaAGAGAAATCCGATATAGATCCGCCATAGCCTTTAACCAGCATATCGTAGGAATCTCACGTCGTCGTGAAAGAGAGAAATCGTCTGGCATCGAACGATAGATCCAACCATGCCTTACACCACCATAGAAGAGAAGCGCCCACCACCTGctttattccctgcccatcatcc
Capsella grandiflora (v1.1)
ID:
Scaffold16851_SINE_4Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
309Start:
668End:
976Strand:
->Scaffold16851_SINE_4
aaggatacccatgactAGCCATCAAGTATCTGGTCACAGATCAACCGTTAATCTGTTCGCAAAGTGTTGAACCGACCGGTCTGAAGCTCAACTTCCGCTGCAAGTAAGATCTACCGCTCGCAAGCCACTTAGCCAAGAGAAATCCGATATAGATCCGCCATAGCCTTTAAccagcagatcgccggaacatcatcccatgtcgccgtgaaagagagaaatcgtctggcaTCGAACGACAGATCCAACCATGCCTTACACCACCATAGAAGAGAAGCGTCGACAACCTGCTTTAATCCCTGCCCATCAGCC
Capsella grandiflora (v1.1)
ID:
Scaffold16851_SINE_5Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
257Start:
1910End:
2166Strand:
->Scaffold16851_SINE_5
GAAAAGAGATTTGAAATAGGGCAGTACACCAGAAACACAATTTATCTGCTAAATCCGACGCTAGTAAGGAcggctcgtttgcgactaaaacatgacatcaattcttaggttagagctcgcgaaccccaccgcaaagcgtcattgtgaTCAAACCTAACCCGCAACTTTCCTTTTGGAAAAGGAAGATCCGCCACAACTAGAGAGCCAATAAGCTTCTTCTCCCCGACCTAGCAAAAAGAAGCGTCGCAACAAACCCT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_6Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
142Start:
287End:
428Strand:
+>Scaffold17160_SINE_6
TCTCTTCTTTCTTGGTGTAAGGCATGGTTGGATTTGTCGTTCGATGCCAAACGAATTCTCTCTTTCACGGCGACCTGAGATGTTGTTCTTGCGATCTGCTCGTTAAAGGCTATGGCGGATCTATATCGGATTTCTCTTGGCT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_7Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
690Start:
918End:
1607Strand:
+>Scaffold17160_SINE_7
gGCTGATGGGCATGGATTAAAGCAGGTGGTGGGCGGTTCTCTTCTTTCGTGGTGTAAGGCATGGTTGGATTTGTCGTTCAATTCCAGACGATTTCTCTCTTTCAAGGCGACCTGAGATGATGTTCTTGCGATCTGCTGGTTAAAGGCTCTggcggatctataccggatttctcttggccaagtggcttttgagcagtagatctgtcttgcggcggaagttgactttcagaCCGGTGGGTTCACCACTTTTCGAACAGATTAACGGTTGATCTGGGACCAGATCCTTGATGGCTAGTCACGGGTATCCTTAACCGCAATTTGATGTTTGATGGCTTGGTTGAGCTAGCGTCcatcctccaccGCCGTGATTGGTTTTCTGTTCGCCGGATCGGAAAAGAGGTTGCTTTAGAAGTAAAGGTAAGTGTGATACATTGGATCAGAAGGTTTGTTGCGAAGCTTCTTATTGCTAGGTTGGGGAGAAGAAGCTTATTGGCTCTCTAGTCGTAGCGGATCTTCCTTTTCCAAAACGAAAGTTCCGGGTTGGGTTTGATCTCAGTGacggtttgcggtggggttcgcgaggtctagcttaagtattgagttcaagtcttagtcgcaaacgagtcgccttgctAGCGTCGGATTTAGAAAATAAATTGTGTTTCCGGTGTACTACCCGTTTTCAAACCT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_8Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
309Start:
2091End:
2399Strand:
+>Scaffold17160_SINE_8
ggctgatgggcagggattaaagcaggtggttggtgcttCTCTTCTTTGTTGGTGTAAGGCATGGTTAGATCTGTCGTTCGATGCCAGACGAATTCTCTCTTTCACGGCGACCtgagatgatgtTCTTGCGATCTGCTGGTTAAAGACTATGGCGGATCTATATCGGATTTCTCTTGGCTAAGTGGCTtatgagcggtAGATCTGTCTTGCGGCGGAAGTTGAGCTTCAGACCGCTGGGTTCACCACTTTGCAAACAGATTAACAGTTGATCTGTTAATAGATCCTTGATGGTGAGTCACGAGTATCCTT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_9Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
307Start:
2461End:
2767Strand:
+>Scaffold17160_SINE_9
ggctgatgggcagggattaaagtaggtgggggcgcttctcttctatggtggtgtaaggcatgctTGGATCTGTCGTTCGATGCTAGACGATTTTTCTCTTTCACGGCGACCTGAGATGATGTTCCAGCGATCTGCTGGTTAAAGGCTATGGCATATCTATATCGGATTTCTCTTGGCTAAGTGGCttgtgagcggtagatcttacttgcggcggaagttgagcttcagaccgatgggttcaccacTTTGCGAACGGATTAACGGTTGATCTGTGACCAGATCCTTGATGGCTAGTCATGGGTATCCT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_10Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
304Start:
3555End:
3858Strand:
+>Scaffold17160_SINE_10
GATGGGCAGGGAGTAAAGAAGGTGGTGGGCGCTTCTCTTCTATGGTGGtgtaaggcatgGTTGGATCTGTCGTTCGATGCTAAACGATTTCTCTATTTCACGGCGACCTGAGATGATATTCCTGCGATCTGCAGGTTAAAGGCTATGGCGGATCTATATCGGATTTCTCTTGGCTAAGTAGCTtgtgagcggtagattggtcttgcggcggaagttgactttcagaccggtgggtacaccactttttgaacagattaacggttgatctgtgaccagatccttgatggctagtcacgggtatcct
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_11Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
309Start:
3893End:
4201Strand:
+>Scaffold17160_SINE_11
GGCTGATGGGCAGGGATTAAAGTAGGTGGGGGCGCTTCTCTTCTACGGTGGTGTAAGGCATGGTTGGATCTGTCGTTCGATGCCAGACGATTTTTTCTCTTTCACGGCGACCTGAGATGATGATCCAGCGATATTATGGTTAAAGGCTATGGCATATCTATATCGGATttctcttggctAAGTGGCTTGTGAGCGGTAGATCTTACTTGCGTCGGAAGTTGAGCTTCAGACCGGTGGGTTCACAACTTTGCGAATGGATTAACGGTTGATCTGTGACCAGATCCTTGATGGCTAGTCGTGGGTATCCTT
Capsella grandiflora (v1.1)
ID:
Scaffold17160_SINE_12Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
695Start:
4284End:
4978Strand:
+>Scaffold17160_SINE_12
GGCTGATGGGCAGGGATTAAAGCAGGTGGTGGGTGCTTCTCTTCTATGATGGTGTAAGTCATGGTTGGATTTGTCGTTCGATGCTAGACGATTTCTCTCTTTCACGGCAACTTGAGATGATGTTCCTGCGATCTGCTGGTTAAAGGCTATGGCAGATCTATATCGGATTtctcttggctaagtggcctgtgagcggtagatctgtcttgcagcggaagttgactttcagaccgttgggttcacaattttccgtacagattaacggttgatgtgtgactagatccttgatggctagtcacgggtatccttaaccggatttttatggttgatggcttgcTTGAGCTAGCGTCCATCCTCCACCGCCGTGATTGGTTTTTTGTTCGCCGGGTTAGAAGGGAGGTTGCTTTGGAGTAATGGTAATTGTGATACGTTATTTCAGAGGTTTGTTGCGAGGCTTCTTTTTGCTAAGTTAGGGAGAAGAAGCTTATTCGCTCTCAGGTTGTGGCGGATCTTCCTTTTCCAAAAGGAAATTTCCTAGTTAGCTTTGATCTCAGTGACGGTTTGCGGTGGGGTTCACGAGCTCTAGCCTAAGAATTGATGTCAAGTTTTAGTCGCAAACGAGCCGTCCTTAATAGCGTCGGATTTAGCAGATAAATTGTTGTTCCGGTGTACTGCCCGTTTTCAAATCTCTTTTC
Capsella grandiflora (v1.1)
ID:
Scaffold18711_SINE_13Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
285Start:
807End:
1091Strand:
->Scaffold18711_SINE_13
GGATCTGGTCACAGATCTAGCGTTAATTTGTTCGCAAAGTGGTGAACTCACTGGTCTGAAGCGCAACTTCTGCCGCAAGACATATCTAccgctcacaagCCACTTAGCCAAGAGAAATCCGATCCAGATCCGCCATAGCCTTTAACCAGCAGATCGCAAtgacatcatctCAGGTCGCCGAGAAAGAGAGAAATCCTTTGGTATCGATCGACAGATCCAACCACGCCCTACACCACCATAGAAGAGAAGCgcccaccaccTGCTTTAATCCCTGCCCATCAGTCG
Capsella grandiflora (v1.1)
ID:
Scaffold19865_SINE_14Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
290Start:
284End:
573Strand:
->Scaffold19865_SINE_14
cacctactaaATTTGACGCTACCAATGATGGCTCGTTTGCGACTAAAACATCCCATCAATACTTAGGCGGGAGCTCGCGAACCCCACCGCAAACCGTCACTGAGATCATACTTACCTGGAACTTTCCTTTTGAAAAAGGTAGATCCGCCACAACCTGAGATCCAATAGCTTCTTCTTCTCGACCTAGCAAAAAGAAACCTCGCAACTATTCCTTCGATccggcgaagagaacatcaatcacggtggTGGAGGATGGACGCTAGCTCAAGCAAGCCATCAACCATCAAAAT
Capsella grandiflora (v1.1)
ID:
Scaffold19865_SINE_15Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
590Start:
1293End:
1882Strand:
->Scaffold19865_SINE_15
CTAAATCTGACGCTAGCAAGGACGGCTCGTTTGTGACTAAGACATGACATCAATTCTTAGGCTGGAGTTCGTGAGCCCCACCGCAAACCGTCATTGCGATCAAACCCAACCCGGAACTTTCCTTTtgggaaaggtagatccgccacaaccagagatctaatagcttcttctccgtgacctagcaaaaagaaacctcgtaactaaccctctaatccaacgaatcacacttacctttacttccaaagaaacctcccttccaatCAAGGCGGTGGAGGTTGGACGCTAGCTTAAGCAAGCCATCAACCATCAAAATCCGGTTAAGGATCCCCATGAATAGCCATCAAGGATCTAGTCACAGATCATCCGTTAATCAGTTCGCAAAGTGGTGAACCCACCGgtgtgaacctcAGCTTCCGCCGCAAGACAGATCTACATCTAACTAGCGAATTAGCCAAGAGAAATCCAATCCAGATCCGCCATAGCCTTCAACTAGCATATCCTTGGAACATCATCTAAGGTTGTTGTGAAAGGGAGAAATCGTCTTCATCGAAGGACATATCCAACCACGTCTTACACCACCATAGAAGAGA
Capsella grandiflora (v1.1)
ID:
Scaffold19865_SINE_16Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
202Start:
2247End:
2448Strand:
->Scaffold19865_SINE_16
CACCTACTAAATTCGACGTTAGCAAGGATAGCTCGTTTCCGACTAAGACATGCCATCAATACTTAGGCCGGAGCTCGCAAACCGTCACTGAGATCATACTAACCCGGAACTTTCCTTTTggaaaaggtagATCCGCCACAACCAGAGATCCAATAGCTTCTGCTTCCCGACCTAGGAAAATGAAACTTCGCAACTATTCCTT
Capsella grandiflora (v1.1)
ID:
Scaffold22404_SINE_17Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
138Start:
588End:
725Strand:
+>Scaffold22404_SINE_17
TTCTCTTGACTAAGTGGCTTGTGAGCGATAGATCTGTCTTGCTGCGGAAAATGAGCTTCAAACCGGTGGgttcaccactttgcAAACAGAGTAACGGTTGATCTGTGACCAGATCCTTGATGGCTAGTTACGGGGATC
Capsella grandiflora (v1.1)
ID:
Scaffold22404_SINE_18Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
205Start:
698End:
902Strand:
+>Scaffold22404_SINE_18
AGATCCTTGATGGCTAGTTACGGGGATCTATCTTTTCCAAGAGAAAAGTTCTAGGTTGGGTTTCATCTCGGTGACGGTTGCGGTTGGGTTCGCGAGCTCCAGCCTAAGAATTGGTGTCAAGTCTTAGtcgcaaacgagccgtccttgctagcgttggatttagcaggtaatttatgtttccggtgtactgcccgttttcagattt
Capsella grandiflora (v1.1)
ID:
Scaffold22404_SINE_19Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
255Start:
1153End:
1407Strand:
+>Scaffold22404_SINE_19
GTGTAAAGCGTGGTTGGATGAGTCGTTCGATGCCAGAAGATTTCTCTCTTTCACGGCGACCTGAGATGATGTTCCTTCGATATTCTGGTTGAAGGCTATGGCGGATCTGGATAAGACTTCTCTTAGCTAAGTTGCATGTGAGCGATAGATATGTCTTTCTGCGGAAGTTGAGCTTCAAACCAGTGGGTTCACCACTTTGTGAACAGATTAACGGTTGATCTGTGACCAgatccttgatggctagttacggtgatc
Capsella grandiflora (v1.1)
ID:
Scaffold22404_SINE_20Class:
RetrotransposonsOrder:
SINESuperfamily:
SINELength:
212Start:
1380End:
1591Strand:
+>Scaffold22404_SINE_20
AgatccttgatggctagttacggtgatcgaCCTTTTCCAAGAGGAAAGTTCTAGGTTGGGTTTGATCACGGTGACGGTTTGCGGTGGGGTTCATGAGATCCTGCCTAACAATTGGTGTCAAGTCTTAGTCGCTAACGAGCCGTCCTTGCAAGCGTTGGATTTAGTAGGTAGTTTATGTTTCCGGCGTACTGCCTGTTTTCAGATCTCTTTTC