ID Class Order Superfamily Length Start End Strand View
Scaffold1004_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA3196842168739+
Scaffold10289_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA1742382523998-
Scaffold10421_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA1451708217226-
Scaffold10486_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA16714071573+
Scaffold10702_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA1742629126464-
Scaffold1080_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA1212126921389+
Scaffold10869_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA3241041510738+
Scaffold10869_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA2362062920864+
Scaffold1100_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA1232502925151-
Scaffold11216_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA12743234449-
Scaffold11305_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA11984938611-
Scaffold1138_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA1671911519281+
Scaffold1150_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA913246932559+
Scaffold11654_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA1641105111214-
Scaffold117_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA1248384383966-
Scaffold11771_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA106750855-
Scaffold1216_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA996258362681-
Scaffold12366_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA1579211077+
Scaffold12402_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA1199311049+
Scaffold1249_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA16276987859+

< 1 2 3 4 5 > Total 15


Capsella grandiflora (v1.1)

ID:

Scaffold1004_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

319

Start:

68421  

End:

68739

Strand:

+

>Scaffold1004_SINE-tRNA_1

GTTGACGAAGGGTTTAGTAATGCTTCTATATTATAAGGTTTGGAATTAGAGCCCCAAATATCGCGATTTATTAATATTTCTGTAGATTAATAGAGATAGGTTTTTAAAAGATCTCCAATAATGCGCAATTAAAACTGTTTGCTGTAATTCTAACTATTAAACGAGAAGATGGTGTCCAAGATCAGCATGGAGAAGGAGGCGTTCAAAATCACCAAAAAAGAGTGTTGTCAATAATGAATCTAATAGGGTCGGAATGATTGCCATAGTAGATATTTGTAACAATTCTCATAATCTACAACAATTAATAAATATAAAGACG

Capsella grandiflora (v1.1)

ID:

Scaffold10289_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

174

Start:

23825  

End:

23998

Strand:

-

>Scaffold10289_SINE-tRNA_2

TTTTTTTTTtttctttttttttgaataatcaaagaggttctggaccgaaacccatacatcccctcagacccgaaaccaaagcatattatatggtttcgtcccaaacAATACTCGAACCGGCGACCTCTAAGCTTTTGCCAGAGATCTTTACCAATTGATATATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold10421_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

145

Start:

17082  

End:

17226

Strand:

-

>Scaffold10421_SINE-tRNA_3

TTTTTCTTTTTAATAACTATAAAGTTCTAGGTCGAAGTTCATATATTTTCTCATGTCCGAAACCAAATCATGCAATATAGTTCCGTCTCAAACGTTATCCAAACCGGCGACTTTTAAATTTTTACAAGAGATTTTTACCAATTAA

Capsella grandiflora (v1.1)

ID:

Scaffold10486_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

1407  

End:

1573

Strand:

+

>Scaffold10486_SINE-tRNA_4

AACCAAGTCGTTTTGGTCCAGTGGTAAAGAGAGGTAAGTTTCGCCACCTGGGTTCGAGTACCATTGGCCACAGAGATTTGAGATTTAACATGGTTTCCCTCGACCCCGGGATATAAGTCTTTGGGCCTAGAAAACCTTTGGGATCACTCCTGAATTATAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold10702_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

174

Start:

26291  

End:

26464

Strand:

-

>Scaffold10702_SINE-tRNA_5

TTATTATTATTATTATTTTTTTTAATAATTAAAGAGGTTCTGGGTCGAATCCCATACATCCCCTCAAACCCGAAACTAGAGTATGTTATATGGTTTCGTCCAAAATGCTACTTGAACCGGCGACCTTTGAACTTTTGCCAGAAATCTTTACCAATTGAGCTATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold1080_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

121

Start:

21269  

End:

21389

Strand:

+

>Scaffold1080_SINE-tRNA_6

AAATTTCGAGGTTGCCGGTTCGAGAAGTGCTTGGGACAAGACCATATAACATGCTATGGTCTCAGATCTAATGGGATATATAGGTTTTGCCCAGAACTTTTTTATTTCTCAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold10869_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

324

Start:

10415  

End:

10738

Strand:

+

>Scaffold10869_SINE-tRNA_7

caatggtgttgaccaagggtttagtaatgcttctacaccaagatgtttggggttcgagtcctagatagcgggatttattaatatttctgCAGATTAATGGAGATATGTTTACAGGAGATCTCCAGTGATGCGCAATTAGTGCCGTTCGCCGTGATTCTAGCTATTGAAGAAGAAGATGGTGTCTAACATCAGCATGGAGAAGAAGGTGTTCAAGATCAGCAAAGGAGTGTTGTCAATAGTGACTCTAATAGGGTCGGAAGGAATTGCCCATGGTAGATATCTTTGTAACAATTCTCACAATTTGCAATAATTAATAAATTTAAA

Capsella grandiflora (v1.1)

ID:

Scaffold10869_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

236

Start:

20629  

End:

20864

Strand:

+

>Scaffold10869_SINE-tRNA_8

CAGATTAATGGAGATATGTTTACAGGAGATCTCCAGTGATGCGCAATTAGAGCCGTTCGCCGTGCTTCTAGCTATTGAAGAAGAATATGGTGTCTAACATCACCATGGAGAAGAAGGCGTTCAAGATCAGCAAAGGAGTGTTGTCAACAGTGAATCTAATATTGTCGGAAGGAATTGCCCATGGTAGATTATCTTTGTAACAATTCTCACAATTTGCAATAATTAATAAATTTAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1100_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

123

Start:

25029  

End:

25151

Strand:

-

>Scaffold1100_SINE-tRNA_9

tttttttttttttttgaataatcaaagaggttctgggccgaagcccatacatcctctcaggcccgaaaccaaagcatgttatatggtttcgtcccaagcacTACTCGAACCGGCAACCTCTAA

Capsella grandiflora (v1.1)

ID:

Scaffold11216_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

127

Start:

4323  

End:

4449

Strand:

-

>Scaffold11216_SINE-tRNA_10

aagttcatacatcccctcagacccgaaatcaaagcatgctatatggtctcgtcctaagcgctactcgaaccggcgacctTTAAACTTTTGCCAGAGATATTTACCAATTGAGCTATTAGCACTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold11305_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

119

Start:

8493  

End:

8611

Strand:

-

>Scaffold11305_SINE-tRNA_11

TTTACATTTATTAATTATCGTAGATTATAAAAATATTACAAAGATAGATTTACCATGCGCAGTTCCTTCCGACCATATTAGATTCACAATTAACGACACTCCATGTTCTCCATACACCT

Capsella grandiflora (v1.1)

ID:

Scaffold1138_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

19115  

End:

19281

Strand:

+

>Scaffold1138_SINE-tRNA_12

accaattgctaatagctcaattggtaaagatctctagcaaaaactcagaggtcgccggttcgagtggcgcttgggacgaaaccatataacatgctctggtttcgggcctgaggggatgtatgagctttggcccaaatcctcTTTGATTATTCTAAAAAAAATGAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold1150_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

91

Start:

32469  

End:

32559

Strand:

+

>Scaffold1150_SINE-tRNA_13

aagcttagaggtcgtcagtacgaataacatttgaacgaaactatataactttggaggcctgaagggatgtatatatttcggcccataactt

Capsella grandiflora (v1.1)

ID:

Scaffold11654_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

11051  

End:

11214

Strand:

-

>Scaffold11654_SINE-tRNA_14

TTTTTTTTGTTGAATAATCAAAGAGGTTTTGGGCCGAGACCCATACATTTTTTCAGACCCCAAAACCAGAGCATGTTATATGGTTTCGGCCCAAGCGCTACTCGAACCGGTTACCTCTAAGTTTTTGCCAAATATCTTTACCAATTGAACTATTAGCATTTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold117_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

124

Start:

83843  

End:

83966

Strand:

-

>Scaffold117_SINE-tRNA_15

GGCGGCCTGAAAGCACTGGAACGATGCAGCCCGTATGTGAAATCTGCAGTGGCCAGAGCTCGAACTCATGATGGCGGATACTTCAGCTGAGGGTCCTTTACCACTATAGCTAGAGGCACCGGTT

Capsella grandiflora (v1.1)

ID:

Scaffold11771_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

106

Start:

750  

End:

855

Strand:

-

>Scaffold11771_SINE-tRNA_16

TTTAAATTTATTGATTATTCTAATTTATGCGAAATATAATGTAGAGGATTTTACAATATATAATTCTTTCCGACTTTATTAGATTTATAATTGATAACACTTTCTT

Capsella grandiflora (v1.1)

ID:

Scaffold1216_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

99

Start:

62583  

End:

62681

Strand:

-

>Scaffold1216_SINE-tRNA_17

TTTTTTTTTTTAATAATCAAAGAGGTTTTTGGCCGAATCCTATACATCCTCTCAGCCCCGAAACTAAATCATGTTATATGGTCTTGTCCCAAGCACTAC

Capsella grandiflora (v1.1)

ID:

Scaffold12366_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

157

Start:

921  

End:

1077

Strand:

+

>Scaffold12366_SINE-tRNA_18

CAAGTGCTAATAGATCAATTGGTAAAGTTCTCTAACAAAAGTTTAGAGGTCGCCGGTTCGAATAGATTTTGGGACGAGACCATATAACATGCTTTGGTCTCGGACCTGAAAGGATGTATGAGTTTCAGCCAAGAACCTCTTTGATTATTTAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold12402_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

119

Start:

931  

End:

1049

Strand:

+

>Scaffold12402_SINE-tRNA_19

CAAGTGTTGCTAGCTTTATTGGTAAAAACTTTTAGCCAAAATTTATAACTTGCTGGTTCGAATGACATTTTGGAAGAGGACCACATAATGCTATGATCCTTAGCTTGAGAAAATGTACG

Capsella grandiflora (v1.1)

ID:

Scaffold1249_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

7698  

End:

7859

Strand:

+

>Scaffold1249_SINE-tRNA_20

GCCTTGGTCCAGTGGTAAAGGGAGGTAAGTTTCGCCACCAGGATTCGAGTAGTATTGGCCACGGGGATTCAAGATTTAACATAGTTTTCCCCGGCCCCATGAGATTAGTCTTTGGGCCTAGATAGCCTTTGGGATCACTCCTGAGTTATAATAAATAAAAAA