TBGR-Browse-Cgr-Retroposon.Retroposon-L1-dep

ID	Class	Order	Superfamily	Length	Start	End	Strand
Scaffold1090_Retroposon-L1-dep_1	Other	Retroposon	Retroposon-L1-dep	163	16101	16263	-
Scaffold11891_Retroposon-L1-dep_2	Other	Retroposon	Retroposon-L1-dep	498	1012	1509	+
Scaffold12398_Retroposon-L1-dep_3	Other	Retroposon	Retroposon-L1-dep	100	16215	16314	-
Scaffold12845_Retroposon-L1-dep_4	Other	Retroposon	Retroposon-L1-dep	215	8223	8437	-
Scaffold15800_Retroposon-L1-dep_5	Other	Retroposon	Retroposon-L1-dep	491	1384	1874	+
Scaffold17192_Retroposon-L1-dep_6	Other	Retroposon	Retroposon-L1-dep	538	327	864	-
Scaffold17899_Retroposon-L1-dep_7	Other	Retroposon	Retroposon-L1-dep	150	1781	1930	-
Scaffold2178_Retroposon-L1-dep_8	Other	Retroposon	Retroposon-L1-dep	577	10222	10798	+
Scaffold22222_Retroposon-L1-dep_9	Other	Retroposon	Retroposon-L1-dep	755	15	769	-
Scaffold2324_Retroposon-L1-dep_10	Other	Retroposon	Retroposon-L1-dep	252	30245	30496	-
Scaffold25568_Retroposon-L1-dep_11	Other	Retroposon	Retroposon-L1-dep	441	1111	1551	-
Scaffold2600_Retroposon-L1-dep_12	Other	Retroposon	Retroposon-L1-dep	425	11158	11582	-
Scaffold2600_Retroposon-L1-dep_13	Other	Retroposon	Retroposon-L1-dep	216	11597	11812	-
Scaffold2704_Retroposon-L1-dep_14	Other	Retroposon	Retroposon-L1-dep	323	28434	28756	+
Scaffold28671_Retroposon-L1-dep_15	Other	Retroposon	Retroposon-L1-dep	465	1	465	+
Scaffold3050_Retroposon-L1-dep_16	Other	Retroposon	Retroposon-L1-dep	192	18840	19031	+
Scaffold3055_Retroposon-L1-dep_17	Other	Retroposon	Retroposon-L1-dep	605	5353	5957	-
Scaffold3055_Retroposon-L1-dep_18	Other	Retroposon	Retroposon-L1-dep	127	6315	6441	-
Scaffold4031_Retroposon-L1-dep_19	Other	Retroposon	Retroposon-L1-dep	193	176570	176762	+
Scaffold418_Retroposon-L1-dep_20	Other	Retroposon	Retroposon-L1-dep	109	106585	106693	+

Capsella grandiflora (v1.1)

ID:

Scaffold1090_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

163

Start:

16101

End:

16263

Strand:

-

>Scaffold1090_Retroposon-L1-dep_1

AGAAGAGAGAACCAACTTAAGCTGACAGAGAAGAGATCTCATCCACCCTTGGATCACCTAGAAGCCTAAGGGAATTAAGAACAAGGCCACCAGAACAAGCAAGATCTAGGTTGCGAGAGCTTAAGAGAGAGAAGAGAGAATTTGCTACAGGAACGATTGTCCT

Capsella grandiflora (v1.1)

ID:

Scaffold11891_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

498

Start:

1012

End:

1509

Strand:

+

>Scaffold11891_Retroposon-L1-dep_2

CCCTTTTCTCTCTCTTCTAGTCCAAGCTCAGATCTAGATCTCTTTCTTAGTGGCTTTTGAACGCCATTCCTTTGGTACGCTTTGAAGCACAGAGGCAGGTTCTTCTCCTTTTGATGCGGTTACAGATCCGGAGACTTGGTAGAAGAATTTTGCAGTAATCTTTGCCGGTTTTAAGCAAAGGTTTTCGTGGCTCGTCCAATTGTTCGACTATGTATCAATGTCGGAAGTCGTCAGGAGAAAAGTTAGGATCGGTCAAATCATCATGGTAGTTAATGGTAGATCCTTTGGGATCTTGATCGTCGTCGCAGGTTGTTGATGGTTAGACTTCCCATTGATTCGTCGGCCCCAATCATCACCctgacttgtttcctcatggcctatataaaggagtctggTTTGGCGTTTCAAAGGTTGTCAGAGCTGGGAAGGAGGGGTTAGGTCGGAATTCGGCTTGCTTAGTATGGGAGCTGTCTAGAATGTGTCGAGTGGTTGAAGGGT

Capsella grandiflora (v1.1)

ID:

Scaffold12398_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

100

Start:

16215

End:

16314

Strand:

-

>Scaffold12398_Retroposon-L1-dep_3

GATGACTCAATCGGAGACCCAAATGCCCGAAATCCGCGACGGCCTTCAAGATCCAGACGGATCTACCGTTAACCGCCAAAGCGCTTTGTACATTGCCCAC

Capsella grandiflora (v1.1)

ID:

Scaffold12845_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

215

Start:

8223

End:

8437

Strand:

-

>Scaffold12845_Retroposon-L1-dep_4

AGCTTCTCGACCGCCAAAACAGAGCCACAACTGCATCAAAAGGGAGGATAAACCACACCACCGCTGCCAGAGAAGAGATATTGCTCACCTATGCTTCCTCTTCACAGCCCAAGATCTGCAATGAAGAACAAAAGCAAAAAGAAAGTAGATCTAGGAGAAAAAAAACTTTTTCTTCAAAAGAAAGAGAAAAAGGAACACTAAAAGAACGATTGTCC

Capsella grandiflora (v1.1)

ID:

Scaffold15800_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

491

Start:

1384

End:

1874

Strand:

+

>Scaffold15800_Retroposon-L1-dep_5

CTTTTCTTCTTGTGTTTTTCAGAGCTTCATCTTTGGCTGTTGTCTAGAAAAAATTGAGTTACAGTGATGGGCTAGATTCTTTCTCCGACAGCGGCGGTGTGGTATCTTCTTCATCGATGTAGCGGTCGCTCCGGTAAGACGGAGGAGAGATCTGTTGCGCATAACCCTGGTTGAAGACGCTAGCGGTTGTAACGGAGTCTTTCCATGGCTCAACCGTCCATCTAGTCGTTGCTGTTACGGCGGAAGTCGATGGAGTAGTGGTGGGTTTCGCTGTGATGTCTTGGTGGTTTACGATCGATCTTTGCGATCCTTCTGGCCTTGCGGGTTCCGGTAAAGGAGTGTCTGTCTGAGCCGTCAACCTCTGGATCCGCCGTAGTGGTTTCCACCGTACCGGTTTGAAAGGGTTTTTGTTCAGAGGTTTACGAGGGTTCCGGTGTTGGTTAGAGGGGTTAGATTCCCGGTTGTCAGATTGCTAGGCGTGGGATCTGACA

Capsella grandiflora (v1.1)

ID:

Scaffold17192_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

538

Start:

327

End:

864

Strand:

-

>Scaffold17192_Retroposon-L1-dep_6

AACGGGCTTTTTTATTTAGTAAACCCTTTAATAGGCTGAGCCTTTGGTTACATAGTGAAACTAGGGCAAAAGGCAAAACGTAATTCCGCCGTCACCAGGAAAAAGACTTGCGTTACATTGACACCGTCGTGCAGCTAATTAGATCATGAAAATCGGCAGATGCAAGATCCACAGCTTTGCGGCCGGATCGAGTTATCTAGTGAACGGGAATAAACCATCTGACCTACATAGCCGTTCCTTTTCCTTCGAACTACCAACTCGCCACGAATCTCCCGAAATGGTCAATCACCGACGCGCAGCACGTTGTTGAAAGCTTTTAGACCAAGCAAGCCAAGCTTTGGACGAAGCCTCTCTTTCCCGGATCTGGCAAAGAAAACGACTCGCTGGATAAGATACCTTCGAATCTGCCCAGAGGAAGCAAGTCACGGCGACGACGGGGGATGACTCAATCAGAAGCCCAATCACCGTAGATCCGCGATGGCCATCAAGATCTGCGAGGATCCTATGTTAACCTCTAAAGCGATTCAGCAACTAACCA

Capsella grandiflora (v1.1)

ID:

Scaffold17899_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

150

Start:

1781

End:

1930

Strand:

-

>Scaffold17899_Retroposon-L1-dep_7

GACCGGAGACACAAATACAACCTAGTATACCTCACTAGCCAAACGAGAAGAGAAAGAAGCACTAGGAACAAAGTGGGACGCCTTGAAAATTGAATGTAGATAAGCCAAAGAAGATCAGCAGCTCTAACACGCGGACACTCGTCGAACCAG

Capsella grandiflora (v1.1)

ID:

Scaffold2178_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

577

Start:

10222

End:

10798

Strand:

+

>Scaffold2178_Retroposon-L1-dep_8

GAGTTCTAGACATTGCGGCGACTCGGTCTCCATTCCTTCTTTTGCGTTGGCGTAACCAGTTCTTAGTCTGTAGGTGGATTTGGCTGGGTCTACGAATGTCCGTGTGCAAGTAATGGTGGTCCTTTTTGAAGTTCTCCCCTCCGGATCTCAGGGTTTCACCTTGTAGCGATGCCTTCTTGTATCCCTTGGTTTTTGGAGTGGTAATGATGGTAAGGATTTGTGCTTTGATCCTCTTGTTTATCTGTGTTCGTTTCTGCTGGGGTCGTGGTTTTGGTGAGTTCGTTTTAGTTCCCTCCTCGGGCTTTCTCTGTTGAAGGCAATCTAATGTTGGGTCCTCTTTGAAGCTCATGTTTGTTTCATCTAATGAAACCTCTATCCAGCTCCAAATTGTTCTATGGAAACGTACGTCAGATCCTTTTGGTGAAGAGTTATCAGTTTTGTTGCTTGGGATCTTTTGTTATTTGCCTTTGACGCTTCTATTTAAGGTTTTTcgttatttgattcacccattttgggtctttttatctggggttttacatgtaaccgccgggttttgtttggaaggaatttttccttg

Capsella grandiflora (v1.1)

ID:

Scaffold22222_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

755

Start:

15

End:

769

Strand:

-

>Scaffold22222_Retroposon-L1-dep_9

CCGGAAAATAGGCTCTGGTTATATTTGACACCGTATCGCGGAAGCGACCGACCATTAAATCTGGCGGACGCGAGATCCACGGCTTTGTGGCGGACCGAGGTATCTAGGTAACAGAGAGGAAGCGACCGACTTCTGATTTCGTTTCTTTTTCCCCGGCCAACCAACCCACTACAAATCTCTCGGAAATGCCCTCTCTCCGACGACTCAGCACGTTGTCAGCTCTTGAGCCTAGCGAACCGACTACTTCTGAACTAACCCCTCCTTCCATACTTTGACAACCATCCAATCGCTGTCCAAACTTCTTCTAACCGGTCATGGGGAAGCAAGTTGTGGTGATGATTGAGGCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTGACGGATCTTTTGTTAACCACCATGACGATTCGACCAAACCCACCTTCTCTCCCGCCGACTTCTGCCATGGCTGCACAACCGACCAATTGGGTGAGCCACAAAACACCTTCGCTACCCTTAACCAGCGTCTTCAAACCGGTGGAGTTACAACAAAAGTCTTCTACCAAATTGCCGGATCTGAAACCACGTCGAGAGGAGAGAACCCACCGCTGCCGACCGAGAAGAAGTCTGGTCCCCCTGTTTCTCAAGGTAGAACCAAAGGAATCACGATCAAAGCCACTAAGAAGTAAGAACAGATTTGAATCTAAGATTGAACCTGAAGAGAAAGAGAGAAGAGAGAAGCGGAACGCTTGTCC

Capsella grandiflora (v1.1)

ID:

Scaffold2324_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

252

Start:

30245

End:

30496

Strand:

-

>Scaffold2324_Retroposon-L1-dep_10

TAAGAAGTCTGAAGAGAGGACTGACCCAAGCACAACCAGCCACAACACCAGCAGAAAGAACCAAAACCACAACAGACATGAGCAAAGAGACTACAACAACTCAATCTAACCAAGAAAACTAAGCAGAAGAGAAGATCTAGGTTTAAGGTAAAGAAACCGAGACCTCCGTCAGGGAAAACATCAAAGAAGCCCAAGAATTCTTACACGCGGACACTCGCAAACCAGAGAAAGCCATCTACACTCGCAAAAACT

Capsella grandiflora (v1.1)

ID:

Scaffold25568_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

441

Start:

1111

End:

1551

Strand:

-

>Scaffold25568_Retroposon-L1-dep_11

TCCCAACCTAGCAATTTGACAACCGGGAATCTATCCCCTCCAACCAAACCAGGAGCTCCGCCATCCCCTGAACAAAGAACTCTCCAAACCGGACCGGTGGAAGCCACACACGACGGATCCAGAGGGAGACGGCTCATGCACACACTCTATCACCGGAACCCGCAGTAGCCAAAAAGGATCAGAAGAACTAACCGTTAACCACCAAATCGAAACAACGAACCCACCTCTTCTTCAACGACttccgccgtagCCGCAAGAACCATACGGACGACTGAGCCAAGGAGAGGCTCTGATACAACCACCAGCGTCTTCAAACCAGTGTCAAGCGCACCAAAACTCTCCGCCGCCCGACCGGAACCACTGCTACATCGTTGAAGAAGCACCACACCACCGCTGTCGGAGGAGAGAACTAGCTCATCAATGAAGCTCAAATAAAGCCAA

Capsella grandiflora (v1.1)

ID:

Scaffold2600_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

425

Start:

11158

End:

11582

Strand:

-

>Scaffold2600_Retroposon-L1-dep_12

TGCCTTATTTATTGAAAATGTCCAGTAAATTGGGCTGAGCCTCAGACTTTACATGTGAAACAAAGACTCAAGAAACAGAAAAAAATACAACATTGGATGGAAGCTATTCACCTAATGACACTGACGCAGAGAGCCGACCATTAAAACCGGCGGATGCGAGATCCATAACTTTGCGGCAGATCAAAGTATCTAGCAAATGACAAGAAACATCTGACCCCAAAATCTGTTCCTTTTCCCTCAATTAACCATCCCACCACAAATCCTCCGGTAAAGTCAACTCTGACGACACGGCACGTTGTTGACGGCTCCCGATCCTAGCAAGCCGAAAACTTCAGCCCTAATCCCTCCTTCCTAGATATGTCGATTCTCTGAAATCCGATCTAGCCTTCCTTCGATCCGACCTAGAGGAAGCAAAATGCAGTGGT

Capsella grandiflora (v1.1)

ID:

Scaffold2600_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

216

Start:

11597

End:

11812

Strand:

-

>Scaffold2600_Retroposon-L1-dep_13

AGATCCGGAAGGATCCATCATTAACCTCCAAGGAAAAACAGCAAAAGACCCTGACTTCCGTCGTAGAAGCATAACCGACACAGCGTCTGAGCCACGAAAGATATCTGCTACATCCCAACCAGCCGGAGGAAAAACACAGCAGATCTCTCCTACCAACTCGCCAAATCTTGATCTACATCAACGGGGAAAATAACCAACCACTGCTGACGGAGAAGG

Capsella grandiflora (v1.1)

ID:

Scaffold2704_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

323

Start:

28434

End:

28756

Strand:

+

>Scaffold2704_Retroposon-L1-dep_14

TGGTTGAAGACGCTGGCGGTTGTATAAGAGCTTCTTCTTGGCTCATCCGTTCAACTAGTCGTTGCGGCTTCGACGGAAGTTGGTGGAGAACAGGTGGATTTCGCTGTTCTGCCTTGGTGGTTTATGGTAGATCCATGGGATATTTGATGACCACTGTGGGTTCTGGTAAAAGAGTGCTTGTCTGAGGCATCAACCTCTGGATCCGCCGTTGTGGTTTCCATCGGACTAGTTGAAAAACATTTTGTTCAAAGGATTTTGTGGCTTCTAGATTTAGATGGAGGGGATAGATTCATGGTTTTCATATTGCTAGGTATGGGATCTGA

Capsella grandiflora (v1.1)

ID:

Scaffold28671_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

465

Start:

1

End:

465

Strand:

+

>Scaffold28671_Retroposon-L1-dep_15

CCTTCTCGTATCCCTTGGTTTTTGGAGTGGTAGTGATGGTAAGGATCTGTGCTTTGATCCTCTTGTTTGTCTGTGTTCATTTCTGCTGGAGTCGTGGTTTTGGTGAGCTCGTTTTAGTTCCCTCCTCGGGATTTCTCTGCTGAAGGCAATCTAATGTTGGGTCCTCTTCGAAGCTCTTGTTGTTTCATCTAATCAAACCTCTTTCCAGCTCCAAATTGTTCTATGGAAACGTACGTCGGTCCTTTTGGTGAAGAGTTATCAGTTGTGTTGCTTGGGATCTTTTGATATTTGTCTTTAACCCTTCTCTTTAAGGTTTTTCCTTCTTTGATTCATCCATTTTGGGTCTTTGTTTCTGGGGGTTTTTATGTGACCACCGGCTTTTGTTTGGAAGGATTTTTTCCTTGCCATATTGTATAACTTACCAAAAGTTTTTATTGAATTATTCAGACGAAACAAAAAAAAAAA

Capsella grandiflora (v1.1)

ID:

Scaffold3050_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

192

Start:

18840

End:

19031

Strand:

+

>Scaffold3050_Retroposon-L1-dep_16

GGCTGGCCGGGGGAAAAGAAACGGATGCGGGAGTTGTTTGATGCGCTTCTGTTGTCTAGTTACTTCGCCCTGCCGCAAAATTTTCGATCTCGCAACCGCCGGATTTCATGGCCGGCCGTCTGCGTCCCGGTGTTAATATGACATGAGATTCTTTTCCGACGTTGACTTCTCCCGACGATCGTCTTTGTTTTT

Capsella grandiflora (v1.1)

ID:

Scaffold3055_Retroposon-L1-dep_17

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

605

Start:

5353

End:

5957

Strand:

-

>Scaffold3055_Retroposon-L1-dep_17

AAAAAAGGCTCCTGACCTATCGACACCGCCGATACAAAAAATCGACCATTAAAACCAACGGCTACGAGAACTACAACTTTGCGGCAGATTGAAGTATCTAGCCAACGACAAGAAGCAACCAACTTTCGAATCCGTTCTTTTTTCCTCAACCGGCCAAATCCGTCACAAATCTCATACTAAAGTCAACCATATATTTGACATCACATCAACCCTAGCAAGCCGACAACTTCAACCTTAACCCCTCTTTTCCAGATATGTTGATTCTCCAAATCCGACCAGTCCCCTTCGTACCTGGTCTGGAGGAAGCAAGACACATAGGCGATTGGGGCCGATGGCTCAACCGGAAGCTCAATCACACAGAACCTGCGTCGGCCAGAAAAATCCCAAAGGATATGCCGTGAACCTCCAAGGCAAATTAGCAAAACCTATCGTCTTCCCTATCGTCTTCAGCTTTAGATGTATAGCCGACACAAAGGCTGAGCCACGAGGAATAACCACTGCAACCTTACGACGTCTTCAAACCGGAGGAAAACGTAACATATCTCTCCTATATACCCATCTACAACAAAGGGGAAACGAACCGCTCCACTGTTGATGGAGACAGC

Capsella grandiflora (v1.1)

ID:

Scaffold3055_Retroposon-L1-dep_18

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

127

Start:

6315

End:

6441

Strand:

-

>Scaffold3055_Retroposon-L1-dep_18

CACCTCTGTAAACACCAAGCAAGCTGAGGAAAAGATGTACGGAGGCCGCATGAAACTCATATACAGATCTACTTTTGGAACAATAAAGAGAGAGAAGAGAGAGTTATACGGAACAATTGTCCTTCTT

Capsella grandiflora (v1.1)

ID:

Scaffold4031_Retroposon-L1-dep_19

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

193

Start:

176570

End:

176762

Strand:

+

>Scaffold4031_Retroposon-L1-dep_19

TGACTTACTTCCTTGTGATCGGTAAAAAGAGTGTAGTTCAGCAAATCTAAGACTGCTAGTGCTGAAAAAAAAGGGGTTATGTCGAAAGTTATTGGTTTGCTTGGTACGGGAGCTGACAACAATATGCCGTGTAGTCGAAGAGTTGGTCATATCGGGAAATATGTGACAGAATGGTTGGTCGACAGAAAAGAAA

Capsella grandiflora (v1.1)

ID:

Scaffold418_Retroposon-L1-dep_20

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

109

Start:

106585

End:

106693

Strand:

+

>Scaffold418_Retroposon-L1-dep_20

CGCCGGAGTTGATGATCGGATCCTCTGCTTCACAGTGTCAATAGGACACGAGTCTTTTTCCAGTGACGGTTACTATTCCGATTTGttgtagccactgttcttttttgta