ID Class Order Superfamily Length Start End Strand View
Scaffold1120_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro174680853-
Scaffold11260_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro8934122+
Scaffold1262_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro218112603112820+
Scaffold1671_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro133870752870884-
Scaffold1681_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro217187084187300-
Scaffold1796_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro2721398514256+
Scaffold2236_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro858044680530+
Scaffold2471_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro297182498182794+
Scaffold25895_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro11135933703+
Scaffold3392_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro2921127011561+
Scaffold4318_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro24080138252+
Scaffold4553_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro20824862693+
Scaffold487_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro961637016465-
Scaffold4978_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro11380308142+
Scaffold567_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro115107297107411+
Scaffold568_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro82825475825556-
Scaffold6170_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro1006901769116-
Scaffold8040_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro1939931185-
Scaffold824_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro111396028396138-
Scaffold897_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro109249894250002+

< 1 > Total 1


Capsella grandiflora (v1.1)

ID:

Scaffold1120_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

174

Start:

680  

End:

853

Strand:

-

>Scaffold1120_LTR-Ngaro_1

CATGCACAAAATCCACGCATAGTCGCATATAAACATAGCAATATAGCATCCACGAACACGCATATAAACATAACATCCACGCACTAACGCACACACACATAAACATAGCAATATAGCACCCACGTACACGCACACGCATATAAACATAGCATCCACGTACACGCACACGCACAC

Capsella grandiflora (v1.1)

ID:

Scaffold11260_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

89

Start:

34  

End:

122

Strand:

+

>Scaffold11260_LTR-Ngaro_2

ATTGTTCTGTTCACTCACAATTGTACTACTACTACTACTACTGTTGCTGCTGCTGCTACTGTTGTTGCTGCTACTGCTACTACTCATCA

Capsella grandiflora (v1.1)

ID:

Scaffold1262_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

218

Start:

112603  

End:

112820

Strand:

+

>Scaffold1262_LTR-Ngaro_3

CAGCTATTCCTCCAGCAACAACAATTACAAATACAACAGCAACAACAACAACAGTTGCTTCAACAACAACAACAACAACAGCAACAGTTCCAGCCACAACAAGATATGCAGCAATTTCAGCAATTTCAACAACAGCAACACTTCATTCAACAACAGCAATACCAACAACAACAACAACAACGCTTGTTACAATCTCCTCCTCTTCCTCAGCCGCAGCA

Capsella grandiflora (v1.1)

ID:

Scaffold1671_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

133

Start:

870752  

End:

870884

Strand:

-

>Scaffold1671_LTR-Ngaro_4

TTTGTTGTTCCTGTTGTTGAAGCCGCTGCTGCTGTTGCTGAAGCTGATACAGTTGCTGCTGCTGAAACTGAAATTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTTTCTGTGACTGGATCTGAAGCTGCTG

Capsella grandiflora (v1.1)

ID:

Scaffold1681_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

217

Start:

187084  

End:

187300

Strand:

-

>Scaffold1681_LTR-Ngaro_5

GCCATTGTTTTTGCTGTTGTTGTCATTGTTATTCCCATTGTTGTTGTTGTTGTTGTTGTTATTCCCATTGTTGTTATTGCCATTGTTGTTATTACCATTGTTGTTGTTGTCTTTGTTACTCCCATTGTTGTTATTATCATTGTTGCTATTACCATTGTTGTTGTTGTTATTGTCATTGTTGTTATTACCATTGTTACCATCATTGTTATTGTTGTTT

Capsella grandiflora (v1.1)

ID:

Scaffold1796_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

272

Start:

13985  

End:

14256

Strand:

+

>Scaffold1796_LTR-Ngaro_6

CAGTTGCCTCAGCCATCAACTACGTTGTCCCAACAACAGCAGCTGCAGCAATTGCTTCACTCCTCTTTGAACCAGCAGCAACAACAATCACAGTCTCAACAACAGCAACAACAACAGTTACTGCAGCAGCAACAACAGTTGCAGTCTCAACAACACAGCAATAACAATCAATCGCAGTCTCAACAACAACAACAACAACAACACTTGCAGCAGCAGCAGCAGCAACAACATCAACAACCGTTACAGCAACAGACTCAGCAGCAGCAGCAAAG

Capsella grandiflora (v1.1)

ID:

Scaffold2236_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

85

Start:

80446  

End:

80530

Strand:

+

>Scaffold2236_LTR-Ngaro_7

CCGTTGGATATATATATATATATatatatagtggaagatggtgggataTATATATATATATATATTGTCGTGTCGCATTATCTCC

Capsella grandiflora (v1.1)

ID:

Scaffold2471_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

297

Start:

182498  

End:

182794

Strand:

+

>Scaffold2471_LTR-Ngaro_8

CAAAGCGCGAGAACAGCAATTGCAACAATCTCACCACCCTCAGGTTTCACAGCAGCAGCAGCAACAACAGCAGCAAATACAAATGCAGCAACTCTTGTTACAACAACGTGCACAACAACAGCAACAGCAGCAACAACAACATCATCATCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAACATCAAAACCAACCACCTTCTCAACAGCAGCAGCAGCAGCAACAGCAGCAGCCGGCGTCTCAACACCAACAGCAGTCAACATCACAGCAGCCGCCACA

Capsella grandiflora (v1.1)

ID:

Scaffold25895_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

3593  

End:

3703

Strand:

+

>Scaffold25895_LTR-Ngaro_9

CAACAACAACAACAGCAACAACAGCAACAACAACAACAACAGCAGCAACAACAACACCAACAACACCAACACCAACAACAGCAACAGCAACAGCAACAACATCAACAACAG

Capsella grandiflora (v1.1)

ID:

Scaffold3392_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

292

Start:

11270  

End:

11561

Strand:

+

>Scaffold3392_LTR-Ngaro_10

CAGCAACAACAGCTACAACAACAGCACCAACAACAACAGCAGATACAGCAGCAGCAACAACAACAACATCACCAACAGCAACAGATGCCACAACTCCAGcaacaaccacaACAGCACCAGCAGCAACAGTTGCCTCAACTCCAGCAGCAGCAGCAGCATCAATTGTCGCAGCTCCAACATCATCAACAGCAACAACAGCAGCAGCAGCAACAACAACAGCAGCAGCATCAGTTGACGCAGCTTCAACACCATCATCAGCAGCAACAGCAGCAGACATCACCGCTGAATCAGA

Capsella grandiflora (v1.1)

ID:

Scaffold4318_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

240

Start:

8013  

End:

8252

Strand:

+

>Scaffold4318_LTR-Ngaro_11

AGCAACAACAACAGCAAATGTTACATCAGAATCAGCTTCAACAACAACAGGAAGCCATACATCAGAATCAGCTTCATCATCAACAACAACAGCAACAAGAAGCTATACATCAGAATCAGCTGCAACAAGAGGCTATACATCAGAATCAGCTGCTTCAACAACAACAACAACAACAAGAGGCTATGTATCAGAATCAGCTGCTTCAACAACAACAACAACAACAACAAGAGGCTATGTACA

Capsella grandiflora (v1.1)

ID:

Scaffold4553_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

208

Start:

2486  

End:

2693

Strand:

+

>Scaffold4553_LTR-Ngaro_12

AACAACAACAACAACAAGGCCAAAACCCACAGTTCCAACTTTTGCTTCAGCAGCAAAAGCTGAGGCAACAGCAACAATATCTCCAGTCCCTCCCACCATTGCAACGGGTTCAGCTGCAGCAGCAGCAACAGGTGCAGCAACAACAACAGTTGCAGCAGCAGCACCAACAGCAACAGCAACAGTTGCAACAACAAGGAATGCAGCTGCA

Capsella grandiflora (v1.1)

ID:

Scaffold487_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

96

Start:

16370  

End:

16465

Strand:

-

>Scaffold487_LTR-Ngaro_13

CTATACACCTATATTTATAGTATATATAAGTTGAGAAGTGTATATATATATATATATATATATCTGACCTGGGAATCAAGATCGGAAGAAGAGTGA

Capsella grandiflora (v1.1)

ID:

Scaffold4978_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

113

Start:

8030  

End:

8142

Strand:

+

>Scaffold4978_LTR-Ngaro_14

CAGCAGCAGCAACAGCAACAGCAACAACATCAGGTGCAACAACAGCAGTTGCTGCAGCAGCAGCAACAACAGCAGTTACAGCAGCTGAATCATCCTCATCCACAACAGCGGCT

Capsella grandiflora (v1.1)

ID:

Scaffold567_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

115

Start:

107297  

End:

107411

Strand:

+

>Scaffold567_LTR-Ngaro_15

ATAAACAAAAACAACAACAACAACAACATAAGCAGCTACAGCAGCAGCAGCAACAGCAGTTTCATGAACGGTTAAAAGCTCACCATCTTCATCAGCAGCAGCAGCTACAGAAACA

Capsella grandiflora (v1.1)

ID:

Scaffold568_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

82

Start:

825475  

End:

825556

Strand:

-

>Scaffold568_LTR-Ngaro_16

ATAAAAATGACAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTtcgcgttattAGCACGACGCTCTAACCAACTGAGCTA

Capsella grandiflora (v1.1)

ID:

Scaffold6170_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

100

Start:

69017  

End:

69116

Strand:

-

>Scaffold6170_LTR-Ngaro_17

TGTTGCTGCTGTTGATGTTGCTGTTTCTGCAATTGCTGCAATAGAAGCATTTGTTGTTGTTGCTGTCGCTGCTGTTGTTGTAATTGGTGTTGATAGAGGA

Capsella grandiflora (v1.1)

ID:

Scaffold8040_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

193

Start:

993  

End:

1185

Strand:

-

>Scaffold8040_LTR-Ngaro_18

TGTTGAAAATGTAACTGTCGAGCATGGGACTGTTGTTGCTCCTGTAAGAGCTTCTGATGTAACTGATGTTCTTGTTGCAGCTGATGCTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTCTGCTGTAGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTTTGTTGTTGCTGCAACT

Capsella grandiflora (v1.1)

ID:

Scaffold824_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

111

Start:

396028  

End:

396138

Strand:

-

>Scaffold824_LTR-Ngaro_19

TGGCTGTTGTTGATTAATCTGCATTTGTTGTTGTTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGGAGTTGTTGCTGCATCTGTTGTAATTGTTGCTGTTGCTG

Capsella grandiflora (v1.1)

ID:

Scaffold897_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

109

Start:

249894  

End:

250002

Strand:

+

>Scaffold897_LTR-Ngaro_20

ACTACTACTACTACTGCAATATATTTAGTTATTTACCACCACTACTACTCCTACTGCTAATAATACTTATTGTTTGTTTAATATATATACGCGACTTCTAGCTACAACA