Capsella grandiflora (v1.1)
ID:
Scaffold1120_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
174Start:
680End:
853Strand:
->Scaffold1120_LTR-Ngaro_1
CATGCACAAAATCCACGCATAGTCGCATATAAACATAGCAATATAGCATCCACGAACACGCATATAAACATAACATCCACGCACTAACGCACACACACATAAACATAGCAATATAGCACCCACGTACACGCACACGCATATAAACATAGCATCCACGTACACGCACACGCACAC
Capsella grandiflora (v1.1)
ID:
Scaffold11260_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
89Start:
34End:
122Strand:
+>Scaffold11260_LTR-Ngaro_2
ATTGTTCTGTTCACTCACAATTGTACTACTACTACTACTACTGTTGCTGCTGCTGCTACTGTTGTTGCTGCTACTGCTACTACTCATCA
Capsella grandiflora (v1.1)
ID:
Scaffold1262_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
218Start:
112603End:
112820Strand:
+>Scaffold1262_LTR-Ngaro_3
CAGCTATTCCTCCAGCAACAACAATTACAAATACAACAGCAACAACAACAACAGTTGCTTCAACAACAACAACAACAACAGCAACAGTTCCAGCCACAACAAGATATGCAGCAATTTCAGCAATTTCAACAACAGCAACACTTCATTCAACAACAGCAATACCAACAACAACAACAACAACGCTTGTTACAATCTCCTCCTCTTCCTCAGCCGCAGCA
Capsella grandiflora (v1.1)
ID:
Scaffold1671_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
133Start:
870752End:
870884Strand:
->Scaffold1671_LTR-Ngaro_4
TTTGTTGTTCCTGTTGTTGAAGCCGCTGCTGCTGTTGCTGAAGCTGATACAGTTGCTGCTGCTGAAACTGAAATTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCTGTTTCTGTGACTGGATCTGAAGCTGCTG
Capsella grandiflora (v1.1)
ID:
Scaffold1681_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
217Start:
187084End:
187300Strand:
->Scaffold1681_LTR-Ngaro_5
GCCATTGTTTTTGCTGTTGTTGTCATTGTTATTCCCATTGTTGTTGTTGTTGTTGTTGTTATTCCCATTGTTGTTATTGCCATTGTTGTTATTACCATTGTTGTTGTTGTCTTTGTTACTCCCATTGTTGTTATTATCATTGTTGCTATTACCATTGTTGTTGTTGTTATTGTCATTGTTGTTATTACCATTGTTACCATCATTGTTATTGTTGTTT
Capsella grandiflora (v1.1)
ID:
Scaffold1796_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
272Start:
13985End:
14256Strand:
+>Scaffold1796_LTR-Ngaro_6
CAGTTGCCTCAGCCATCAACTACGTTGTCCCAACAACAGCAGCTGCAGCAATTGCTTCACTCCTCTTTGAACCAGCAGCAACAACAATCACAGTCTCAACAACAGCAACAACAACAGTTACTGCAGCAGCAACAACAGTTGCAGTCTCAACAACACAGCAATAACAATCAATCGCAGTCTCAACAACAACAACAACAACAACACTTGCAGCAGCAGCAGCAGCAACAACATCAACAACCGTTACAGCAACAGACTCAGCAGCAGCAGCAAAG
Capsella grandiflora (v1.1)
ID:
Scaffold2236_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
85Start:
80446End:
80530Strand:
+>Scaffold2236_LTR-Ngaro_7
CCGTTGGATATATATATATATATatatatagtggaagatggtgggataTATATATATATATATATTGTCGTGTCGCATTATCTCC
Capsella grandiflora (v1.1)
ID:
Scaffold2471_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
297Start:
182498End:
182794Strand:
+>Scaffold2471_LTR-Ngaro_8
CAAAGCGCGAGAACAGCAATTGCAACAATCTCACCACCCTCAGGTTTCACAGCAGCAGCAGCAACAACAGCAGCAAATACAAATGCAGCAACTCTTGTTACAACAACGTGCACAACAACAGCAACAGCAGCAACAACAACATCATCATCAGCAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAACAACAACAACATCAAAACCAACCACCTTCTCAACAGCAGCAGCAGCAGCAACAGCAGCAGCCGGCGTCTCAACACCAACAGCAGTCAACATCACAGCAGCCGCCACA
Capsella grandiflora (v1.1)
ID:
Scaffold25895_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
111Start:
3593End:
3703Strand:
+>Scaffold25895_LTR-Ngaro_9
CAACAACAACAACAGCAACAACAGCAACAACAACAACAACAGCAGCAACAACAACACCAACAACACCAACACCAACAACAGCAACAGCAACAGCAACAACATCAACAACAG
Capsella grandiflora (v1.1)
ID:
Scaffold3392_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
292Start:
11270End:
11561Strand:
+>Scaffold3392_LTR-Ngaro_10
CAGCAACAACAGCTACAACAACAGCACCAACAACAACAGCAGATACAGCAGCAGCAACAACAACAACATCACCAACAGCAACAGATGCCACAACTCCAGcaacaaccacaACAGCACCAGCAGCAACAGTTGCCTCAACTCCAGCAGCAGCAGCAGCATCAATTGTCGCAGCTCCAACATCATCAACAGCAACAACAGCAGCAGCAGCAACAACAACAGCAGCAGCATCAGTTGACGCAGCTTCAACACCATCATCAGCAGCAACAGCAGCAGACATCACCGCTGAATCAGA
Capsella grandiflora (v1.1)
ID:
Scaffold4318_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
240Start:
8013End:
8252Strand:
+>Scaffold4318_LTR-Ngaro_11
AGCAACAACAACAGCAAATGTTACATCAGAATCAGCTTCAACAACAACAGGAAGCCATACATCAGAATCAGCTTCATCATCAACAACAACAGCAACAAGAAGCTATACATCAGAATCAGCTGCAACAAGAGGCTATACATCAGAATCAGCTGCTTCAACAACAACAACAACAACAAGAGGCTATGTATCAGAATCAGCTGCTTCAACAACAACAACAACAACAACAAGAGGCTATGTACA
Capsella grandiflora (v1.1)
ID:
Scaffold4553_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
208Start:
2486End:
2693Strand:
+>Scaffold4553_LTR-Ngaro_12
AACAACAACAACAACAAGGCCAAAACCCACAGTTCCAACTTTTGCTTCAGCAGCAAAAGCTGAGGCAACAGCAACAATATCTCCAGTCCCTCCCACCATTGCAACGGGTTCAGCTGCAGCAGCAGCAACAGGTGCAGCAACAACAACAGTTGCAGCAGCAGCACCAACAGCAACAGCAACAGTTGCAACAACAAGGAATGCAGCTGCA
Capsella grandiflora (v1.1)
ID:
Scaffold487_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
96Start:
16370End:
16465Strand:
->Scaffold487_LTR-Ngaro_13
CTATACACCTATATTTATAGTATATATAAGTTGAGAAGTGTATATATATATATATATATATATCTGACCTGGGAATCAAGATCGGAAGAAGAGTGA
Capsella grandiflora (v1.1)
ID:
Scaffold4978_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
113Start:
8030End:
8142Strand:
+>Scaffold4978_LTR-Ngaro_14
CAGCAGCAGCAACAGCAACAGCAACAACATCAGGTGCAACAACAGCAGTTGCTGCAGCAGCAGCAACAACAGCAGTTACAGCAGCTGAATCATCCTCATCCACAACAGCGGCT
Capsella grandiflora (v1.1)
ID:
Scaffold567_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
115Start:
107297End:
107411Strand:
+>Scaffold567_LTR-Ngaro_15
ATAAACAAAAACAACAACAACAACAACATAAGCAGCTACAGCAGCAGCAGCAACAGCAGTTTCATGAACGGTTAAAAGCTCACCATCTTCATCAGCAGCAGCAGCTACAGAAACA
Capsella grandiflora (v1.1)
ID:
Scaffold568_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
82Start:
825475End:
825556Strand:
->Scaffold568_LTR-Ngaro_16
ATAAAAATGACAAAATGGCCCATGCAGGTTTCGAACCTGCGACCTtcgcgttattAGCACGACGCTCTAACCAACTGAGCTA
Capsella grandiflora (v1.1)
ID:
Scaffold6170_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
100Start:
69017End:
69116Strand:
->Scaffold6170_LTR-Ngaro_17
TGTTGCTGCTGTTGATGTTGCTGTTTCTGCAATTGCTGCAATAGAAGCATTTGTTGTTGTTGCTGTCGCTGCTGTTGTTGTAATTGGTGTTGATAGAGGA
Capsella grandiflora (v1.1)
ID:
Scaffold8040_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
193Start:
993End:
1185Strand:
->Scaffold8040_LTR-Ngaro_18
TGTTGAAAATGTAACTGTCGAGCATGGGACTGTTGTTGCTCCTGTAAGAGCTTCTGATGTAACTGATGTTCTTGTTGCAGCTGATGCTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTCTGCTGTAGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATTTTTTGTTGTTGCTGCAACT
Capsella grandiflora (v1.1)
ID:
Scaffold824_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
111Start:
396028End:
396138Strand:
->Scaffold824_LTR-Ngaro_19
TGGCTGTTGTTGATTAATCTGCATTTGTTGTTGTTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGGAGTTGTTGCTGCATCTGTTGTAATTGTTGCTGTTGCTG
Capsella grandiflora (v1.1)
ID:
Scaffold897_LTR-Ngaro_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
109Start:
249894End:
250002Strand:
+>Scaffold897_LTR-Ngaro_20
ACTACTACTACTACTGCAATATATTTAGTTATTTACCACCACTACTACTCCTACTGCTAATAATACTTATTGTTTGTTTAATATATATACGCGACTTCTAGCTACAACA