ID:

Scaffold10000_LTR-Copia_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

207

Start:

393  

End:

599

Strand:

+

>Scaffold10000_LTR-Copia_1

TAAACCGAgtaatgatttaACTAGAAATAAGGATCATATACTTTAAAAGTTATCTAAGTGTATGTATTTCTAATCGGATTAGGAACAGGTTTCTATATAAATAGAGATGTTGAATCATGATATAAAGAAATTAAGAGCTTAAGATTTGAGATAGTTTCTTAAGCAATAAAGAGAATTGATTCTTTATAAATTTTTCAAGTGTTCTTG

ID:

Scaffold10015_LTR-Copia_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

201

Start:

2707  

End:

2907

Strand:

-

>Scaffold10015_LTR-Copia_2

TCTTCTTTAGTTTCTTTTGCAACCAACTCCTCCTCCTATTATTATATAGAGAAGCATCTTTCTTACTTGGTGATTTCCTTTGATTACTGTAGCGTCTTTGTGATGTCTTACACGTGAATCTCTTCTCCACGTTgtgcaccatttttctccgaggtaagcatcctcttgtgttccatttttctccaaggtaagcatcctttt

ID:

Scaffold10015_LTR-Copia_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

171

Start:

2910  

End:

3080

Strand:

-

>Scaffold10015_LTR-Copia_3

ctccatttttcttctagggtaagcatcctcttgtgctctgtttttctctgaggtaagcattctgttatgctccatttttctttGAGGTAAGCATCCTCTAATGCTCCATTTTTCTCCAAGGTAAGCATCCTATTTTATTGCTTGGTGTCTCTCTATGATCACCATCACGTC

ID:

Scaffold10015_LTR-Copia_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

212

Start:

3144  

End:

3355

Strand:

-

>Scaffold10015_LTR-Copia_4

TGAATCTTCATGACTTCTTTGAACAAGTTTCAAAATTCTCCTTTACAACTCTAGCATCTCATATGAATTCTCCATTTTCTTTTGAAAATATTTCCTATCTCCATTATCCTTCTTGATTGTTCTGTTTGTGAAGGTTGATGATGCTCTCTCTTGTCGACACCTCTTTCCTTTCATCTTCTTCTATGTCTTCTTCTTCTTTCTTTTCTTCTCAC

ID:

Scaffold10015_LTR-Copia_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

196

Start:

3924  

End:

4119

Strand:

+

>Scaffold10015_LTR-Copia_5

TGTTAGTTTTATAATTGAGTTTGGTCTTTAACGTTACTTCATAGTTATATTAGTGTGTATGAGTATTAGCGGATGTGAGTGAAGAGTGTGTGTGTCAAATAAGTTGTGTTGCTACAGTTGTCAGTTTTCATAATACATGAACGGTTGCGACCGTAAACTCTTGTATACATATGTATGTGTTTTGTAACATAACTAA

ID:

Scaffold10015_LTR-Copia_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1599

Start:

20253  

End:

21851

Strand:

-

>Scaffold10015_LTR-Copia_6

ATCTTAATATCCCCCATAACGTTGGTGGtacgtaatctcggacaccgaAAGTTGACATTGTACGTAGACTTAGTTAAGAGATCAGCAACTTGGAACATTGTAGGAATAGTTTAAGTAGTAATGAGTTTATCTTGCACAATGTCACGTACTTGATGATAGGCTCGCTCAATATGCTTCGTTCTCTCGTGAAAATTTGGATTTCTGGCTATGTGGTTACGGCCTGACTATTGTGTAGAAAGGAACCAGATGACAGTGAATAACGCATAGATCCTTTGTAGTAGGCCTTTTAACCACTGCACTTCTTCATGAATATATGCCATGTCAGGATACTTTTCTTCAGGAGAAGAACTTGTGACAATATAAGATCATGTTTCTTTGTCTTCCACGATATTGGTGAGTTTTCAAAATAAATGGCGTAGGCTGAAAGTGAACGAAGAGTGAGAGGGTAAATAGAATGATTAGAGTCCCAAACTCGCAATAATCAGTGAGTGTTAGAGAACTGTCGGATAAGAATGCTTTGAGCGGGTGCACCCTTAAGATAACGATCAAGACTGAGAGCTGCTTCTCAATATGTAACCATCGCAACTTTCATAAACTAAGATAGAATTTGAACTACATAACTTAAATGTGGTAGGAAAATAGTGAGGTAGATAAACTGCCGACGAGATGATGATACTGTTCCACATCATCATATTTAGAACCAGGCACCGAACCAAGCTAATGATTGAGGTCCATTAGGGAAACAAGTTTTGTAATTAGTAGACCCGCCTCACGAATGATTTCGAGTGCGTATTTTTGGTTGAGACAACCAAATTAAACATTTTCCACAAGAGGGGTCAATACCCAAGCAATACTTGACCTTACCAAGATCCTTCATGTGGAAAAACTTGTTAAGTTGAACCTTAAGTTTACCAACATGTGTAAATTGTTTCCGCAATTACAAAATCGTCAACGTAGGTCGAAATATGACGAATCAAATCCCTACGAATCAGTGTAAACAAAGAGTAGTCTTTGTAGCTTTGTTTAAATACTAATTCACAAGCAGTCACGAGCTTTGAGAACCAACATCAAGGTACTAGCTTAAGACCATACAAAGATTTCCTGAAGACGAAACACTTTATTTGGATCAAAAGATTTGTACCCCCGATTGAAGTTTCATGTAATCCTCCTCCTCAAGATCACTATGGAGGAATGCATCATGGACATCCATTTGGTGAACCTCCCATTCTTTTGCAGCAGCAACTCCTAGAAGAGAACGTATTGTTGTCATTTTTGCAACTCAGGGAAAATTTTCTTTAAAATCTACGTCATCTTTTTAGTGCTTACCAATCACAATTAGTCGTACTTTGTAGCGCTTTAGTGAACCATCAGAGTTGAATTTCAATTTGGAAATCCAATTGCTATTTATAGCTTTCTTTCCTGTGCAGTAAATTCGTGATGTTTCAAGTATGGTTTTCCTCAAGAAGGTCAATTTCTTTACGCGTAGCTCCACACCGTTCCTTTATTAAAATAGTTTCCTTAAATATTTGTTGGTGGTTGCTGTCCTTAAAACGCAGCCGTGAAGGCTATGTGATTTGCTGAAAACCCTAGTAGAAAAAA

ID:

Scaffold10015_LTR-Copia_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

442

Start:

22093  

End:

22534

Strand:

-

>Scaffold10015_LTR-Copia_7

TGCTTTGTGATAGCGAGCAACCAACATTCATGTTAAAAAGTATACTACACATGCTCTTCACTTGCTCCAATCAAAGTTTTCGAAAAAATAGTCCTGCAAGAGACATAATTTATCAATGAAAATCCTAATGGAGCATGTTTGCTTCAATAGTTTAGAAACCAAAATTAAAGCGCAGTTGGTTCTATGAACAAATAAAACAGCAATGAGCAAATAAGCAGAGCTCAACAAGAGAGACCCACACTTGATAGCTCAAGAAGGTTGACCATCAGTTGTAAGTAGTGATGGAATAATATCAATAATATCCATCAAAATAGAGATATCACCCGTAATGTGATGAGAAACTCTTGTATCTAAATCAACATCAGTTAAATGAGTTTGATCCTACAACTTTTTGGAAGACGTGTTGAGATTTGAGGAGATTTATGAGATTTGTTATTTGATT

ID:

Scaffold10015_LTR-Copia_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

263

Start:

44491  

End:

44753

Strand:

-

>Scaffold10015_LTR-Copia_8

TTAAGGACTCAAGATCAACAAAAGTATAACTCACTTTTATTAGCTTAAGAAAATTTCCTCAAAAACTTAAGCTCTTAATCTCTCTCTTAAAACTTACATCATATTTCATAACTCGACATTTCTATTTATATAAAACGCCAATCCTAATCCTATAAGGAAATACTCTTGTTTAGATAAATCCTAAACACTTTTAATCCTTAACCATGTCTCGGTTAGGATTAGGATAACTTCTATTTGAAGTTAAGTTTAAGCTTAATCCAACA

ID:

Scaffold10015_LTR-Copia_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

138

Start:

44754  

End:

44891

Strand:

-

>Scaffold10015_LTR-Copia_9

TTCTCCCTCTTAAGCTTAAAGTCACCTTCTTTCATGTCTCTTACTCCAATGAGATCCCTCATTTCCTTGAACTTGATCCTTCCAAGAGCTTTCGTCAAAATATCCGCCTTTTGCTCATTCTAAGAACCCGGTGTTTCA

ID:

Scaffold10015_LTR-Copia_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

109

Start:

44845  

End:

44953

Strand:

+

>Scaffold10015_LTR-Copia_10

TCGTCAAAATATCCGCCTTTTGCTCATTCTAAGAACCCGGTGTTTCATGATCGGAGTAAGCATATACATAGGCGAGAGAGCTATCACCGATTTGTTATCAAGAAGAATG

ID:

Scaffold10015_LTR-Copia_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

718

Start:

44920  

End:

45637

Strand:

-

>Scaffold10015_LTR-Copia_11

GAGAGCTATCACCGATTTGTTATCAAGAAGAATGATAACCTTCTCACATGGTAAATTAGTAATTTCACGTAGCAATTCTTGGAGACGAATAGCTTGTTTTGCGGCTTCTGTACCTGCCATAAATTCAGCTTCACAAGACGATTGTATTTTGTTTGTGTGTATACTAAGACACCAGACTTCCTTCAAGATAAAAAATATAACCCGCTGTGCTCCTCCCATTATATTGATCGACATTATGACTACTATCACTATAGCCAATCAACTTTGAAACCTTTGAAGGTGAAGGTGATCTTCTAAACGTTAAACCAAATGTCATAGTACCTCATAGATACCTTAAGCACTGATTCATTGCTGCTCCATGAGACTCCTTAGGTCTATGCATGTATCAACTTAACACTCCTACACAAAAAGATAAATCTTGTCTCGTGTGTAGTAAGTACCGAAGACACCCAACGTTCTTCCTATAACTTGTAGCATCAATATCTCTCTCCATTGGTATATGAACGAGGTTACACTTCGTCAAGCCAGCCTCCTCCAAGATTTTCAACTCATCCTGATTTTGACCTAAAGTAATACCATCTTTGTTTTGACATACCTCAATCCCAAGATAATAAGTTAACTTACCAAGATCACTCATCTCAAACTTGGAAGCCATTTCCTTCTTGAAATTCTCTATGGCTTGACCACTAGTTCCCAAGAAAAATAGATTGTGAACATA

ID:

Scaffold1004_LTR-Copia_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

83

Start:

68669  

End:

68751

Strand:

+

>Scaffold1004_LTR-Copia_12

TCGGAATGATTGCCATAGTAGATATTTGTAACAATTCTCATAATCTACAACAATTAATAAATATAAAGACGATTAAAAAAATA

ID:

Scaffold101_LTR-Copia_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

174

Start:

10  

End:

183

Strand:

-

>Scaffold101_LTR-Copia_13

CAAGCCTTTCCCTTTCTTTTTGTTGTTGTACATAATATTTTATAAATTTCTACGTATAATCTTTTAGAATCTTGCCAAGTCAGTAACCTTCTCGTCTTTTCATCACATCCACGTTAGCTTCACTTTTATGAAAGCAACTTAGGCGTTTGATGTGATCTGATGCAGTTTCTTGAT

ID:

Scaffold10159_LTR-Copia_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

101

Start:

964  

End:

1064

Strand:

-

>Scaffold10159_LTR-Copia_14

AAACTTGATGGTTATCATTAAATAAGGAGATAAATTTGTACTAGATACAAAAGATGAGGAAATCGAAGAGATTACTAATCAATGAGAAGAGAATAACAAGA

ID:

Scaffold10198_LTR-Copia_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

117

Start:

12074  

End:

12190

Strand:

-

>Scaffold10198_LTR-Copia_15

TACATTCACCGAGCCCTTTTGATTTGAAATTAATTTTAGTATTCAACGCCCATTGTATGTAATTATCTCCCGAGAGATTAAGAGCAACAAAATCCAAGTTGTTGAGTTTCGACATCT

ID:

Scaffold10230_LTR-Copia_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

359

Start:

1721  

End:

2079

Strand:

-

>Scaffold10230_LTR-Copia_16

TGTTGTTTGAGAATATAGATGCATATCAAAACATACGTAACGAAATACGTCTTCTTTATTAAATAGATCAAAATACAGTTCATAGTTTTTACAAAACAGAAACTCACTTGATGATATCTCCTTTCTTACGTGACTGAAACGTATCGTTGATAAAGGCTTGCCAATAGCAATCTCCTAAAACAGAAATTCGCCCCTACGTTGGTGTAAGTAACTTCAACGGACGTCTATCTTGTAAGATACAACTATCGATCTTTGTATTGAAACCTCACAAAGACCCTTTGCATATCTACTTTGAGATTATTAGAAATTGTTTAAGAGAAAAGAAAGATTATAATCAATCTCAATCTATCTTTCTCTTT

ID:

Scaffold10230_LTR-Copia_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

253

Start:

2074  

End:

2326

Strand:

-

>Scaffold10230_LTR-Copia_17

CTCTTTAATGCGACAAATATAGACTCCATTATTGAACATGTAATACACGCTTGTTTAAATGATTTCCAAGACACAACACCATCACCAAGTGTAAACACATAATCACTTGTGGATTTACTATCCATACTTCCAGAGATCCAGTTGGCATCACTATATCCTTCTAATACAAGAGGAAATTTTGTGAAAATAGACCATGATAGATTGTATCCTTAAAGTATCTTAATACTCTAACTAAAGATTTTCAATGGTCTCT

ID:

Scaffold10289_LTR-Copia_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

122

Start:

12844  

End:

12965

Strand:

-

>Scaffold10289_LTR-Copia_18

GATCGATCGATCGATCCACAAGAGGGaccgatcgatcCGCAAGAGGGACCGATCGATCTGCTTCTCCGTATTCAACATCGCGTTGATCGACCGATCAGTCTGACTAAACGACTGATTGATCG

ID:

Scaffold10291_LTR-Copia_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

392

Start:

2242  

End:

2633

Strand:

+

>Scaffold10291_LTR-Copia_19

TTTGCTATTTGTCAATTTGATGAAAGTGAATTCCCCGCGTTAGGGGGAGAATTGAGAGAATCACCAAAAGAAACACATAAATATTTAAAACTTTGGTTTATCTCAATCTTCCTACAAATTAACGGGAATGGGAAGTACAAAAAAGAAAAATCGCACACTTATTAAGTTTGGCAAACTATTTATTTGATGTATTCACATATATAAGAAGGGTGACGAAATCCTATATCCCCGCTGCTAACACTCCATCAATGATAAATGTTCCCGAAGAACATGTTAATGTGAATAGGGCAAATGAACATGTTAAATTAAAGCGCGGGAGGCCAATAGGATCGACCGATAGAAATCCCCGAAacagacacaaactgggaGTAAATGTTCGAGAAGAACCATGT

ID:

Scaffold10291_LTR-Copia_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

377

Start:

2687  

End:

3063

Strand:

+

>Scaffold10291_LTR-Copia_20

GAAGGATTAAAGATCCTAGAAAAATCAAAGATGCAGAAGCATCTAAGAAAATTTGTTCAGTCAAACTACAACGATCACTAAACGGATTAAAGCAGTCTGGACATGTGTGGTATAagcgcttgagtgaatactggtTGAGTAAAGGATACATCAACAATGCGATATGCCCTTGTGTATTTATTAAGAAATCTTTGTTAGGATTTGTGATCATCATTGTATATGTTGATAACCTAAGTATAATTGGAACTCAAAAGGAGATTGATGATGCAAGAGCTCACATGAAAGAAGAATTTGAAATGAAAGATCTTAGAAAGACAAAAATTTGTCTAGTAATCTAGATCGAGCATTTCCAAGACGGAATGTTTTGTGCATCAATC