Capsella grandiflora (v1.1)
ID:
Scaffold1031_LTR-Caulimovirus_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
368Start:
10611End:
10978Strand:
->Scaffold1031_LTR-Caulimovirus_1
TTCATTTGATTGGGCCTAGCTTTAGTTGGAATATGCTTTTCGTTGAAGTCTTTTCCGAAAGGTATTTCAACAATATGTTTTTTCCTCTCCTAGAATGCATTTGGAAGTTCATAGCATATTTGGGTTAAGAGTTCAGTTTCTATTTTTTTTTTAACTTTTTTATTATTTGTGGATCATGTAATTGTTGTTCTATTTGttggttttttaTTTCTTGTTATAAGTATAGAACATGTTTTTGTTTTCTATCTATTAGGTTTATAGATTTTTCTATTGTGGAATTCTGTAAAGGTAAAATTTCTTTTGTTTTCATTGGTGATAGAAATTCAAATATTATCTTTTCTCTTACAATTTTTGTAGTAATTCCTAGT
Capsella grandiflora (v1.1)
ID:
Scaffold1031_LTR-Caulimovirus_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
428Start:
11120End:
11547Strand:
->Scaffold1031_LTR-Caulimovirus_2
TAGAATTTTGTAGGAATTTATTCCCTCTATAATACAGTTATAATCAGCTCATTTATCTAAAAGTGCTATGGTTTCTAGTTTAAAATCATACCCAATGTGTAATgttattttcgtataccatttttgatagtttattttatttattatttggatatattcttcttcttatgttttctcATGTTTATCAGGGTTGCTTGTGGAGGGTTCATCCGTTGTTATGGGTTGAGATTGGTGGATTTTGGGTTCTATAAGAGCTAATCTAGCGTCTACTTGTAGTTGGTGAAGCTGATGTTAGTGAACTATTAGTTGTAATTCTTTTATTTGTGCTTTTAAATTttttacttctccttgcaattcACCGGTAGTTACTTGTTTAAACAGTGTTGGGGAAGGATACTTTTCTATTATTCTATTAAGACTAAATGGTT
Capsella grandiflora (v1.1)
ID:
Scaffold11520_LTR-Caulimovirus_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
848Start:
413End:
1260Strand:
->Scaffold11520_LTR-Caulimovirus_3
CCTTTTATATGATTGACATCAAACTTCCACTGTGAGAACCAACTTGCCCATCTGAGTAATTGAGATTGCGGAAGGACTTTCTGTTTGAACTGTATCATCTTCGGGAAAGAGGACATATCCATCTCGATAAGAAAATGTTGGCCTACTAGATgaaactcgaacttttcaattcctctcttcactgcaagaatctctttgtaggtcgaatggtaatgtctttcactttctTTGAAGGCGCCACTCTTATATCCGCATATATGTCTCTTTCCTTGTTCATCTTCCTCCAAGAGTACTGCTCCCCAGTAGCAGTCACTAGCATCTGTTTGTAGAATTCTTTTTCCTTTTGATGGGATcttcagtgctgGTAATGTCTTTGAGATTCTTTTTAACTCTTTCACTGCTTCTGTGCACTTCTGACTCCATGGTGGTGCATCTTTTCgtagttgagaagagagaacttctctgtactttgctaaaccgtggatgaagtccgccatatagttgacaatgcctaggaattgctgaaCTTGCTTGAATGTTAACTTTTCATCAGGAAATTCGTCAAGTTGGGTTGCAATGTGCGGCTGGAGATGATATTCTCCCTCTGAAATGTGCATACCCAAAAAGTCGATTTCTGTTTCTCCAATAACCATTTTCTTCTCTGAGAGCATGATTCCATATTGttgcacaatatcatggaatttcatcaataggacagTGTGGGAATCAATATCCGGAGAGAACAGTAGTATGTCGTCGATGTAGACCAGCGCATTCGGGAGGATTGGCTCAAAGATCTTTATCATGGCTTTCTGGAATAGAGAAGGAGCTACCTTTAATCCAAAAGG
Capsella grandiflora (v1.1)
ID:
Scaffold17235_LTR-Caulimovirus_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
428Start:
6End:
433Strand:
+>Scaffold17235_LTR-Caulimovirus_4
GAAAAGGCTTACCGGTTGTAGCAAGAGTCGCTCTCCTCGACACCAGGTACAGAGAGTACCAACATGCATGCATAGCAACTATCCAGACGACGTTAAAtactggcactgtcttcgtgactcttttcccaaactttaacgtggctctagaagacccacaaatctgtcAGAACATGCAAATCCAGCTACAAATTACTGGTGCTCCACAAATCGGAAACACATATGCAGCAACCCTGCACCACCAaatggcgtataGAGTCCAGAATCATGCTATGGATTTAAGTCTTCCACGTGAAACTGAAGACGCTTTACTCATCCAACTTGAGTCACAACACAGTCCATCATGCATTCACATTCCAAGacaaatcccaagaagcgagttagtcaagctacttccagaatcatgggtaaCAAACTATGAAAAACTCCAT
Capsella grandiflora (v1.1)
ID:
Scaffold21085_LTR-Caulimovirus_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
576Start:
3954End:
4529Strand:
->Scaffold21085_LTR-Caulimovirus_5
ATTGGTTAAGGAGCATCGTTCCATGTTGTATTTTCTCCAACATTTGATCATGAATTCTCATACTAGTGATTAAGGCATGTCGGGTaggaatgttatGAGGTTATAATGCCATGATAGAATCTAGGGTATTCCCACATCGATGTGGAAAGCTACCTTGGGTAAAGGGCCGATCAGTTGGTGTTTTATTTGTTTAGTATAATAGGGTAGTGAAACTTTGGGTATTTGAGGTGGATATATGTCATTGGAgcggccgaacCAGTACCACCATTCATAGAACCATCCTGGTATTGTCTTGGGGCAATGGAAATCAAAAGAGAGGAACCAGGAGTGATCATAGGTTCGTAGGTAAAAAGTATTGAGAAAGACTTTTTGGTAATCTATGTAGGTAAATCTTGGTATATGATAACATGgtatgggaaatcttttgatgtgtggaggttaataaacccgagatcttgggGGTTGCATATTTTGAGTATTTTGCAAGTGGAGTAGGAGATGAGGTTTGGGGTTCTTTTTGCCCGTATGGTGGGTTATTTCAACTGAATTTGTATATACGAGAATGAATTCGTAAAA
Capsella grandiflora (v1.1)
ID:
Scaffold21085_LTR-Caulimovirus_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
972Start:
4638End:
5609Strand:
+>Scaffold21085_LTR-Caulimovirus_6
GAAGCGTtgatagcataggtgttccaggctgtaagtcccgaaggcagtgagtccgttggtaagcccgtgcatcacccgtcgtcgataAGAACGGTTAGTTTACATTTTAGCATGAGTTTAAGAATACTTTAGACATGGCACTTACGGTTAAAAAGTTGTTTAAGTCTAAACATGCatcatcctctACATCTCAAAAAACAATTAATTCAAGAGCAATCATGTCAAAAATTAAAACTTTCAATCGAGAAATATCAAATGACCAACTACCACATATTAGTCCAGAAAATATATATCaaagaggaacttttgattttaaaatagtgtattcaataaaagaacatgaacaaaatTTATCTTTACAAAAATGAATTTGAAGAAATTAAGTTACATTCTTCTATGGCTTTAGAAAATTATAAAAGAAAGAAATTTAGTTATAATTATAAAAGAAAGAAATTTAATTATATTCATTTTGGTCTAATACAAATagcaataaaacctttattcAGAACGACGATAGATTCTCCAATACTAATGTTATTAAGAGATAAAAATCTTTTAAAGTTTGAGGACTCCTTGTTAGGAGCTGTACAATCAAACTCATGTAACAGAGCTATATACTTTAATTGTGCTCcgaagtttcaagtaagtttacatgacccaacaatattcaatactTTAGTTTTAAACGTACACTTGCTTGAAATTAAATTTCAGCAAGAAAGACATGGGTCTTTATTGTTGTATCAGATTTACTTTAAGCAATCTAcatctgagtctAATCCTCGATGTTTGTTGCAAGATGACAAAGGCGAAACAACAATATTAgctgtacatagTAAAGATACTCCAACCTCTACCTATACACCTAAACAATTAAAATGAACAGAAATAACAATCCCTGATCAATGGAAAATTAATATTACTCAACCACCGAGAAACTTTGAACAAAGAACTATTACAAGTATAACAGAA
Capsella grandiflora (v1.1)
ID:
Scaffold21085_LTR-Caulimovirus_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
1589Start:
5713End:
7301Strand:
+>Scaffold21085_LTR-Caulimovirus_7
AACAAAAACCAAGAGAAAAAACCcattaactttcAAGCACCAATAGCTGAACCAATTCAACCATCATAGGTAGGGTCGTCTAACTTTCCTACTTTTCCAACTCCTTCAGATTTTAAATCAATAAATGTTATTTTGAAAGTATTTACGATAGATAAGCATTATCTTAAAGAAGAATTTTTATCACATCAAAATAAAGATAAAAGAAATAGTACTTTGAAACTTTTACTAAAGAATTACTTacaacttttagagaaatatggtacagtcacatggaaattatagaaataattattccattttttacatgGTTTGAAACCTACGCTTTAGAAAACAAAATAGACTACCCATATAAAGATAGATCAATAAACACTAGTTCAACCTTATGTCATACGTGGGAAATGACTAACTAGAAAACACATAAATCAGTCCATCCACCGttaatggatatAAAAATTCACACTCCTCAAACACAAGTAATAGCTACACCTTTTAGAAATTGAGCAACCAGAGATGATAGAGATTCAATAAATATGGCTGACATTAAAAtagtatatgaacaaaataattaccaaagtcaaaaactacatagtatttcacggaaAGTTGATCATATAGATAACAAATTAGATAAAGACAAATTTTTTTAATAACAAACTATAAACCATTGTTACCACCTTTTAACACAATATCACCACCCCTTTTTAAACAATtgactaaaccattaaattcccagaaaatgaaattttaaaatcaatttcaagtagactagatagactagacaaaggtaagggtataaacaatattgataaaaataTTCAGTCTGAAACCGATATAGAAATAAATTGAATAAAAAGAAACTACTAGCAATCCAAAAAACCATATTATCCAAGACACTCTTCACCCGACCTATTATTTGAAGAGCATAATAAATTTCTCTCCACAAACTTTTATAACGGGGAAAGGATATATGAATGGAACATAGATGGAAGGTCCAAATATGAAATAATGGACTTTTTTTttaagaaatgggaatgGCTACCTTAGCTTATAAATCTAAAGGAATGTCAGATAAACAAGCATGTCTGCTCTTAATCTCAAGGTTCAATGGTGCCTTAAAATTTTGGTGGGATAATGCCTTAGATATAACACCACAAGATTCTATTATAAACCATACTGAAACTATAAGAGTAGAAGGGGATGATGGTTTTTATGAGGAAGAACAAATTCAAAATGCTGTTGAACTATTACTTCAGACAATCACCATGCATTTCGTAGGTAATCCTTCTGAAGAACTTACAAGTAAAAAACTTATTTTAACAAACCTTAGATGTCCAACACTAGGAGACTTTAAATGgtataaagacATATTTATAACAAACATATTTCAAAGAATCGACTGCAACCAACCCTTCTCGAAAGAAAGGTTCATTGCAGGATTACATTCGTTCTTTGCAGAACGATTAAttagtaaactAAAAGATTTTTCTGGCGGACAACTGGTACCTTGGGATACCATAACTTATGGTCAGTTGGTTGTCTTTGTTAAAAAGGAAGGATTACAAATATGTCAAGAACATAAAGATAAACAA
Capsella grandiflora (v1.1)
ID:
Scaffold2742_LTR-Caulimovirus_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
249Start:
20103End:
20351Strand:
+>Scaffold2742_LTR-Caulimovirus_8
ggcatatatgcggatacaagagtggcgctttcaaagacagtgaaaggcattaccatttgacctacaaagagattctcgtaGTAAAAAGAGGAATTGAAACATTCGAGTTCCATCTAGTTGGTCAACATTTTCTCATCGAGATGGATATGTCATCTTTCCCAAAGATAATACAGTTCAAACAGAAAGTCCGCCCACAGTCACAATTAATCTGATAGGCAAGGTTGTTCTCACAGTGAAAGTTTGACGTCA