ID Class Order Superfamily Length Start End Strand View
Contig156_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro1105775357862-
Contig159_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro117107942108058-
Contig1717_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro8946874775-
Contig1934_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro942462224715+
Contig2850_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro25240674318-
Contig325_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro867212172206+
Contig326_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro1252663326757+
Contig576_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro2325449454725-
Contig683_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro2758696487238-
Contig7129_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro12918331961+
Contig748_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro1074487644982+
Contig874_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro1165623056345-

< 1 > Total 1


Barbarea vulgaris (v1.0)

ID:

Contig156_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

110

Start:

57753  

End:

57862

Strand:

-

>Contig156_LTR-Ngaro_1

GCAATAGTAGTACGAGGAGTAGTAGGAGGAGTAGTCGGAGGAGTAGTAGTAGTAGAAGTAGTAATAGGAGTAGTAGTAGGAGTAGGAGGCGGAACCGGAGCTGCAGACCA

Barbarea vulgaris (v1.0)

ID:

Contig159_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

117

Start:

107942  

End:

108058

Strand:

-

>Contig159_LTR-Ngaro_2

TTGTTGCTGCTGTTGTTGCTGCTGTTTCTGCAATTGCTGCAGTAGTAGCATCTGCTGTTGTCGCTGTTGTAATTGGTGTTGATAGAGGAGTTGTTGTTGTTGTTGTTGTTGCTGCTG

Barbarea vulgaris (v1.0)

ID:

Contig1717_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

89

Start:

4687  

End:

4775

Strand:

-

>Contig1717_LTR-Ngaro_3

TTTTTTTTTTTTTTTTTTTTTAACGTATCGTAGGCGTGTTTACTTATGAAATTCAAAATGTAAACACAACTGTCAAACGTAAAAAATGA

Barbarea vulgaris (v1.0)

ID:

Contig1934_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

94

Start:

24622  

End:

24715

Strand:

+

>Contig1934_LTR-Ngaro_4

ACATTACATTTTTACATTAGCATTTTTTCAACCATTTTTTCCATCATCTCTTTATCATACATAATAAGGCCGTAAAGGGAAACACACATAGCTT

Barbarea vulgaris (v1.0)

ID:

Contig2850_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

252

Start:

4067  

End:

4318

Strand:

-

>Contig2850_LTR-Ngaro_5

GTTGTGTTGGAGGATACTGAGTCACAGGGTTGGTCACAGGTGGTGTAAGTGTAGGAGGAGGAATTGTTGTGACTGGAGGAACTGTTGTGGCTGGGTTTGTTGGCGTTATAGGAACTGTTGTGGCTGGGTTTGTTGGCGTTATAGGAACTGTTGTAGCTGGATTTGTAGGCGTTATAGGAACTGTTGTAGCTGGATTTGTAGGCGTTATAGTCACCAGTGGAAATGTAGCCGGCGGTGTAGTTGTGGGATTTG

Barbarea vulgaris (v1.0)

ID:

Contig325_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

86

Start:

72121  

End:

72206

Strand:

+

>Contig325_LTR-Ngaro_6

CGTCTTCTCCGTGCCCGAGATTCTACTTCATCATCATACATGCATATCCATATGCTTTCACACACACATATATACATTTATATATA

Barbarea vulgaris (v1.0)

ID:

Contig326_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

125

Start:

26633  

End:

26757

Strand:

+

>Contig326_LTR-Ngaro_7

CAAGAGCAACAACAACAACAACAAATGATACATCAGAATCAGCTTCTTCATCAACAACAACAGCAACAACAACAAGAGGCTATACATCAGAATCAGCTTCATCAACAACAACAACAACAACAAGA

Barbarea vulgaris (v1.0)

ID:

Contig576_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

232

Start:

54494  

End:

54725

Strand:

-

>Contig576_LTR-Ngaro_8

TTGTTTTTGTTGTTATTCCCATTGTTGTTGTCATTATTATTCCCATTGTTTCCACCATTTTTGTTGTTGTTGTTGTCATTGTTATTCCCATTGTTGTTATTACCACCATTGTTACTATTACCATTGTTGTTGTTATTACCACCATTGTTGCTATTACCATTGTTGTTGTTGTCATTGTTGTTATTTCCTTGTGGCGGCGATGGTGGAGATTGTGAGTCTGAAGAAGGGGGTG

Barbarea vulgaris (v1.0)

ID:

Contig683_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

275

Start:

86964  

End:

87238

Strand:

-

>Contig683_LTR-Ngaro_9

CTGTGGCTGCTGCTGTGGTGTTGGCTGCTGTTGGNNNNNNNNNNNNNNNNNNNNCTGCTGTTGAGAAGGTGGTTGGTTCTGATGTTGTTGTTGCTGTTGCTGCTGTTGCTGATGATGATGTTGTTGTTGCTGTTGATGTTGTTGTTGTTGCTGTTGCTGCTGGTGCTGTTGTTGTGCACGTTGTAACAACAATTGTTGCATTTGTATTTGCTGCTGCTGTTGCTGTTGCTGCTGCTGTGAAACTTGTGGGTGTTGAGATTGCTGCAATTGCTGTT

Barbarea vulgaris (v1.0)

ID:

Contig7129_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

129

Start:

1833  

End:

1961

Strand:

+

>Contig7129_LTR-Ngaro_10

ACAACAACAGCAACAACAAGTGTCTAAACATAGACCAGCTCAATCACAACCACAACTACAACTACAACTACATCAACAGCCACAGCCACAGCAACAGCCACAACCACATCATCCAGGTGCAACAATGGC

Barbarea vulgaris (v1.0)

ID:

Contig748_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

107

Start:

44876  

End:

44982

Strand:

+

>Contig748_LTR-Ngaro_11

AGATGAATAATAGTAATAATAATAAATAAATAATAAAAATAAGTAATTAATACAATAATAATAATAATAATAATAAGTAATAATAATAATAATAATAATATTAATAA

Barbarea vulgaris (v1.0)

ID:

Contig874_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

116

Start:

56230  

End:

56345

Strand:

-

>Contig874_LTR-Ngaro_12

GCTGTTGTTGATTAATCTGCATCTGCTGTTGTTGTTGCTGTTGCATCTGCTGTTGTGGTTGCTGCTGCATCTGTTGTTGTGGTTGCTGATGCTGTAGTTGTTGCTGCATCTGTTGT