TBGR-Browse-Bvu-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
Contig1144_LINE_1	Retrotransposons	LINE	LINE	90	49482	49571	-
Contig1259_LINE_2	Retrotransposons	LINE	LINE	152	22446	22597	+
Contig1259_LINE_3	Retrotransposons	LINE	LINE	122	25859	25980	+
Contig130_LINE_4	Retrotransposons	LINE	LINE	354	25	378	+
Contig1379_LINE_5	Retrotransposons	LINE	LINE	98	6195	6292	+
Contig1382_LINE_6	Retrotransposons	LINE	LINE	369	20964	21332	-
Contig1442_LINE_7	Retrotransposons	LINE	LINE	169	42816	42984	+
Contig1561_LINE_8	Retrotransposons	LINE	LINE	170	13856	14025	-
Contig162_LINE_9	Retrotransposons	LINE	LINE	112	8049	8160	+
Contig17_LINE_10	Retrotransposons	LINE	LINE	104	3036	3139	+
Contig1703_LINE_11	Retrotransposons	LINE	LINE	108	18114	18221	+
Contig1734_LINE_12	Retrotransposons	LINE	LINE	109	12325	12433	-
Contig178_LINE_13	Retrotransposons	LINE	LINE	102	38423	38524	-
Contig1782_LINE_14	Retrotransposons	LINE	LINE	104	31475	31578	+
Contig1798_LINE_15	Retrotransposons	LINE	LINE	281	16162	16442	-
Contig1813_LINE_16	Retrotransposons	LINE	LINE	151	17875	18025	+
Contig1813_LINE_17	Retrotransposons	LINE	LINE	360	18061	18420	+
Contig1832_LINE_18	Retrotransposons	LINE	LINE	179	2955	3133	+
Contig1832_LINE_19	Retrotransposons	LINE	LINE	172	3639	3810	+
Contig1847_LINE_20	Retrotransposons	LINE	LINE	115	43763	43877	-

Barbarea vulgaris (v1.0)

ID:

Contig1144_LINE_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

90

Start:

49482

End:

49571

Strand:

-

>Contig1144_LINE_1

TTTTTTTTTTTTTGGTTGGGTAAGAATGTTAATATTAATACCGTTTTAAAAGTTTTTGAGAGAAGCTACAGAGATAGACAAAGAGACGGA

Barbarea vulgaris (v1.0)

ID:

Contig1259_LINE_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

152

Start:

22446

End:

22597

Strand:

+

>Contig1259_LINE_2

TTCCGTTTTTGCGTGTTTCCTTGGAGAAGCTGTATGTGCCCTCTCCTCTAAGGTTGTTGATGGCTATCATCTGTGAGTGTTTCTCGTGGCAGCAACGATGGATTGTGGCATCAATGCAAATGTCCGAGCTTCAGTGCTTGGAATCAGTGTTT

Barbarea vulgaris (v1.0)

ID:

Contig1259_LINE_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

122

Start:

25859

End:

25980

Strand:

+

>Contig1259_LINE_3

GAGGTTTTTGACGGCTGGCATCTAGGAGGGTTTCTCATGGCAACGACAATGAGGACTTTAGTTCTTAAAGATTGTGGCATCAACGCATATGTCCAAGCTATAATGCTCGGAATCAGCTTTTC

Barbarea vulgaris (v1.0)

ID:

Contig130_LINE_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

354

Start:

25

End:

378

Strand:

+

>Contig130_LINE_4

TTCCGTTTTTGCGTGTGTCTTCGGAGAAGTTGTAGGTGCTCCATAGTCTGAGATTTTGAGGCTGGCCTCGGGAGAGGTTGCTCGTGGCAACGACGATGAGAACTCCAATTCTTAGGGATTGTGGCATCGACGCGAATGTCCGGGCTTGGAATCGGTGTTTCTTTGTCGAGCTTTGTTATGTTTGCTTAGACGTGCGCCTATTTTGTTGTATCATTTGGTTCGTCTCTGTGTTTCTGTTGTTTGTTTGTTGTTTCTGTAGTTTTTGGTATTTCCGTCTCCTTGTTATCTCTGTAATTTATGTCAAAAAATTTAAAAAGGTATAAAATTTAACATTTTATCCCAAAAAAATAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig1379_LINE_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

98

Start:

6195

End:

6292

Strand:

+

>Contig1379_LINE_5

CGTTTTTGTATTTGTTCCCCGAGGAGCTGTAGGCACTTCTGCTTAGAGGTTTGAGGATTGACTTCAAGTGGAGGAGGCTCGTGGCAACGACGATGGGG

Barbarea vulgaris (v1.0)

ID:

Contig1382_LINE_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

369

Start:

20964

End:

21332

Strand:

-

>Contig1382_LINE_6

TTTTCTTTTTGTGGGTAACATGTTAAATATTTATACCAATTTCGAATTTGTGACAGCGATTACGGAGAAAACACGGTAAACAGAAAAATCAAAAATCTATAGTAAAAGACTACGAATACAAAAAATATAAATAACAATCAAAGACCACAAGATCAACACGCACGAGAGCCCAACCAGAAAAACGATGATGAAGAAACACCGATTCCGAATCAAGAAATTTGGAAATTTTCGTGATTGCCTCATCTCCAAAGAAACTCAAGTCCTCATCGTTGTTGCCACGAGTAACTCCCACTCAAGTTAAACCTTCAAAACCTCAAAAGTAGGGACACCTTACAGTTTCTCGTGAGGACTAACGCGAAAACAAGATAA

Barbarea vulgaris (v1.0)

ID:

Contig1442_LINE_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

169

Start:

42816

End:

42984

Strand:

+

>Contig1442_LINE_7

TCTTTTTCTTTTGTTCGTTTTCGGAGAAACTGTAGGCACTATTATTTCTGAGGTTTGAAGGCTGGCCTCCGATGGGAGTTGTTTGTAACAATGATGATGAGGATTCGTATTCCCTGGAGCTACAACAACAACGTAAATGTCTTAACCTTGGTTTTCAGAATCGGCGTTT

Barbarea vulgaris (v1.0)

ID:

Contig1561_LINE_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

170

Start:

13856

End:

14025

Strand:

-

>Contig1561_LINE_8

AAAAGAAACACTGATTCTAAGCGGTGACACTCGGACATCCGCATGATTGCCACGGCTCCAAAGAACCCGAGACCTCATCCTTGTTGCAACGAGCATACCCGACCCGAAGTCCTCCTCCAAACCTCAAAATACGAACACACCTACAGTTTCTCCGAACACTAACGCGAAGA

Barbarea vulgaris (v1.0)

ID:

Contig162_LINE_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

112

Start:

8049

End:

8160

Strand:

+

>Contig162_LINE_9

ATGTTGTTTTTGTATATTTTTTTGGTTTTTTTTATCTTCTTGTCGTCTCTGTAACTTCTGTCAAAAACGATAAAATGGTATCTAATCTTAACATTTTTACCCAAAAAAAAGA

Barbarea vulgaris (v1.0)

ID:

Contig17_LINE_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

3036

End:

3139

Strand:

+

>Contig17_LINE_10

TTTTGTAGTTTTCGCTCTTTCCGTCTTCTTGTCTCCTCTATAACTTCTGTAAAAAAAAATTTTAATGGTATTGAATCTTAACATTTTTACCAAAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig1703_LINE_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

108

Start:

18114

End:

18221

Strand:

+

>Contig1703_LINE_11

TGTTTTTGTTTCTGTAGATTTTTGGTCTTTCTGTTTTTCTATGTTTCTCTGTAACGGCTGTCACAAACTTTAAAATTGTATAATTTAACATTTATCAAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig1734_LINE_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

12325

End:

12433

Strand:

-

>Contig1734_LINE_12

TTTTTTTTTTTTTGGTAAAAATGTTAAGATTAGATACTATTTTAACGTTTTTGATAGAAATTACAGAGATAACAAGGAGACGAAAAGACCAAAAAACTATAGAAACAAC

Barbarea vulgaris (v1.0)

ID:

Contig178_LINE_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

102

Start:

38423

End:

38524

Strand:

-

>Contig178_LINE_13

TTTTTTTTTTTTTAAACATGTTAAGATTGGATACCATTCTAAGGTTTTTGAAAGAAATCACCAAGAAAACAAAAAGACGGAAAGACCGAAAAACTACAGAAA

Barbarea vulgaris (v1.0)

ID:

Contig1782_LINE_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

31475

End:

31578

Strand:

+

>Contig1782_LINE_14

TTTCTGTAGATTTTTGGTTTTTTCGTCTTTTTGTTATCTCTGTAATTTCTGTCAAAATTTTAAAATGATATCTAATCTTAACATCTTTACCAAAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig1798_LINE_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

281

Start:

16162

End:

16442

Strand:

-

>Contig1798_LINE_15

TTTTTTTTTTTTTTGTAACATGTGAAGTATTTATACCAATTTCGAATTTGTGACAGCGATTACAGAGAAAACATAAAAACAGAATGACCAAAAATCTACAGCAAAAGACTACAATAACAACAAATACAAATAACGATCTAAAACACCGCAAGGTCAACACGCACAAGAGCCAACCAGAAGACGATGATGCAGAAACACCGATTCCGAATCAAGAAACTCGGGCAATCGCGTCATTGCCTCAGCTCCAAAGAAGCTCGAATCCTCATCCTCGTTGCCACGAG

Barbarea vulgaris (v1.0)

ID:

Contig1813_LINE_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

151

Start:

17875

End:

18025

Strand:

+

>Contig1813_LINE_16

TTCCGCTTTTGCGTGTGTCTTCGGAGAAGCTGTAGGTGCTCCATAGTCTGAGGTTTTGAGGCTGGCCTCGGGAGGGGTTGCTCGTGGCAACGACGATGAGGACTCCAATTCTTAGGGATTGTGGCATCGATGCGAATGTCCGGGCTTCANG

Barbarea vulgaris (v1.0)

ID:

Contig1813_LINE_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

360

Start:

18061

End:

18420

Strand:

+

>Contig1813_LINE_17

TTCCGCTTTTGCGTGTGTCTTCGGAGAAGCTGTAGGTGCTCCATAGTCTGAGGTTTTGAGGCTGGCCTCGGGAGGGGTTGCTCGTGGCAACGACGATGAGGAATCCAATTCTTAGGGATTGTGGCATCGACGCGAATGTCTGGGCTTCATTGCTTGGAATCGGTGTTCCTTTGTTTAGCTTTGATGTGTTTTCTTAGGTGTGTGTTTATTTTGTTGTATCATATGTTTCGTCTCTGTGTTTCTGTCGTTTGTTTGTTGTTTCTGTAGTTTTTGGTATTTTCGTCTTCTTGTTATCTCTGTAATTTCTGTCAAAAATTTTAAAATTGTATAAAATTTAACATTTTACAAAAAAAAAAAAAA

Barbarea vulgaris (v1.0)

ID:

Contig1832_LINE_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

179

Start:

2955

End:

3133

Strand:

+

>Contig1832_LINE_18

GCTATTGTAGTTCCGTTTCGGTCGCGTTAGTGCTTCAGAGAAGCTATAGGTGTGGCTCGATTCCTTGACGTTTGAAGACAATTTCGACTCTGCTTGCTCGTGGCAACAGGATGACGACTCGGCTGCTTCGGAGCGCGGCATCACGCGGATTCGAGTGTCTCCGCCCACGAATCGGTGTT

Barbarea vulgaris (v1.0)

ID:

Contig1832_LINE_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

172

Start:

3639

End:

3810

Strand:

+

>Contig1832_LINE_19

CGTTTTCGCGTTAGTCTTTGGAGAAGCTGTAGGTGTGCTAGTATTTTGAAGTTTTGAGGATAAATTTGGATCGGGCTTGCTCATGGCAACAAGGATGACGACTCAGGATCTTCGAAGCCGTGGCAATCACGCGGATGTCCGAGTGTCACCGCTCAGAATCGGTGTTTCTTTT

Barbarea vulgaris (v1.0)

ID:

Contig1847_LINE_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

115

Start:

43763

End:

43877

Strand:

-

>Contig1847_LINE_20

TTATTTTTTTTTTGGTAAACATGTTAAATATTTATATATTTTAAATTTTGTGACAGAATTATAGAAGTTATACAAAGAAAAACGGAAATACCCAACACTAAAGACAAAACAACAA