TBGR-Browse-Bst-Ret

ID	Class	Order	Superfamily	Length	Start	End	Strand
Scaffold10273_rRNA_1	Retrotransposons	Ret_other	rRNA	256	489791	490046	-
Scaffold10273_rRNA_2	Retrotransposons	Ret_other	rRNA	85	2629233	2629317	-
Scaffold12302_rRNA_3	Retrotransposons	Ret_other	rRNA	98	806561	806658	-
Scaffold124_rRNA_4	Retrotransposons	Ret_other	rRNA	127	718095	718221	+
Scaffold13553_rRNA_5	Retrotransposons	Ret_other	rRNA	399	10958	11356	-
Scaffold13553_rRNA_6	Retrotransposons	Ret_other	rRNA	241	11557	11797	-
Scaffold13671_rRNA_7	Retrotransposons	Ret_other	rRNA	728	1293996	1294723	+
Scaffold13671_rRNA_8	Retrotransposons	Ret_other	rRNA	115	1295093	1295207	+
Scaffold14018_rRNA_9	Retrotransposons	Ret_other	rRNA	162	127	288	+
Scaffold14452_rRNA_10	Retrotransposons	Ret_other	rRNA	122	14966	15087	+
Scaffold14477_rRNA_11	Retrotransposons	Ret_other	rRNA	1568	1	1568	-
Scaffold14477_rRNA_12	Retrotransposons	Ret_other	rRNA	417	1772	2188	-
Scaffold14477_rRNA_13	Retrotransposons	Ret_other	rRNA	84	2698	2781	-
Scaffold14547_rRNA_14	Retrotransposons	Ret_other	rRNA	308	6932	7239	-
Scaffold16327_rRNA_15	Retrotransposons	Ret_other	rRNA	575	67290	67864	+
Scaffold19424_rRNA_16	Retrotransposons	Ret_other	rRNA	824	3724626	3725449	-
Scaffold19427_rRNA_17	Retrotransposons	Ret_other	rRNA	313	120829	121141	-
Scaffold20129_rRNA_18	Retrotransposons	Ret_other	rRNA	637	2874424	2875060	-
Scaffold20129_rRNA_19	Retrotransposons	Ret_other	rRNA	99	2880408	2880506	-
Scaffold2199_rRNA_20	Retrotransposons	Ret_other	rRNA	126	731615	731740	-

Boechera stricta (v1.2)

ID:

Scaffold10273_rRNA_1

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

256

Start:

489791

End:

490046

Strand:

-

>Scaffold10273_rRNA_1

ATTAGCTTTAGAATTACTATGGTTATCCAAGTAGTAGTTACCATCAAACAAACTATAATTGATTTAATGAGTCATTCAGAGTTTTACTATCTGAATTGAATTTGTTCATACTTACACATTCACGACTTTATATTTGAGATAAGCATATGACTACTCGCATGATCAACCAAGTAATATTCATCGATCACAATAATTTTTAACCACTTTCTCACAAACGTTAAGAAAAAAACGGACGAGGTCTTGATCGTTCTCTTTT

Boechera stricta (v1.2)

ID:

Scaffold10273_rRNA_2

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

85

Start:

2629233

End:

2629317

Strand:

-

>Scaffold10273_rRNA_2

GTTGCATTCATCCATCACAGCAATTCCCCGCCACATTCTCGCTAACGCTAAGGAAAGAAAGAACGGACAAGGTCTTGATCGTCAT

Boechera stricta (v1.2)

ID:

Scaffold12302_rRNA_3

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

98

Start:

806561

End:

806658

Strand:

-

>Scaffold12302_rRNA_3

CAGTTCGCAGACAGCCGACGGGTTCGGAActgggaccccCGAGCCCAGCCCTCAGAGCCAATCATTTTTTCCGAAGTTACGGATCCATTTTGCCGCCT

Boechera stricta (v1.2)

ID:

Scaffold124_rRNA_4

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

127

Start:

718095

End:

718221

Strand:

+

>Scaffold124_rRNA_4

gaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATAGGAGCAGCCTAAACCATGAAAACGG

Boechera stricta (v1.2)

ID:

Scaffold13553_rRNA_5

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

399

Start:

10958

End:

11356

Strand:

-

>Scaffold13553_rRNA_5

AACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCTCCCCCCGAAT

Boechera stricta (v1.2)

ID:

Scaffold13553_rRNA_6

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

241

Start:

11557

End:

11797

Strand:

-

>Scaffold13553_rRNA_6

CGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTTCTCCTTTTGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCC

Boechera stricta (v1.2)

ID:

Scaffold13671_rRNA_7

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

728

Start:

1293996

End:

1294723

Strand:

+

>Scaffold13671_rRNA_7

GAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGTAAGGCTGAAACTTTAAGGAATTGACGGAAGGGCACCCCCAGGAGTGGAGCCTGCGGCTTAATTTgactcaacacggggaaacttagcaggtccagacatagtaaggattgacagactgagagctctttcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattctgaCGAACGAGACCTCAGCCTGCTAACTAGCTACGTGGAAGCATCCCTTCACGTTCGGCTTCTTAGAGGGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAAtaacaggtttgtgatgcccttagatgttctgggccgcacgcgcgctacattgatgtattcaacgagttcacaccttggccgacaggcccgggtaatctttgaaatttcatcgtgatggagatagatcatTGCAATTGTTGGTCTTCAACCAGGAATTCCTAGTAAGCGCGAGTCATCAGGTCGCGTTGACTACATCCCTGTTCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATccggtgaagtGTTCGGATCGCGGCAACGTGGGTGGTTCGCCGCCCGCGACCTTGCGAGAAGTCCACTAAACCTTATTATTTAGAGGAAGGAGAAGTCGAAACAAggtttccgtaGGTGAACCTGCGGAAGGATCATTGTCGGACCCTGT

Boechera stricta (v1.2)

ID:

Scaffold13671_rRNA_8

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

115

Start:

1295093

End:

1295207

Strand:

+

>Scaffold13671_rRNA_8

GGCACCGGAGAGGGTGAGAGCCCTGTCGTGCCCGGACCCTACACCACGAGGCAATGTCTACGAGTCAGGTTGTTTGGGAATGCAGCCCcaatcaggcggTAAATTCCGTCCAAGG

Boechera stricta (v1.2)

ID:

Scaffold14018_rRNA_9

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

162

Start:

127

End:

288

Strand:

+

>Scaffold14018_rRNA_9

TGCTTATGGAcccgaacctgggtgatctatctatgaacaggatgaagcttgggtgaaactaagtggaggtccgaaccaactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat

Boechera stricta (v1.2)

ID:

Scaffold14452_rRNA_10

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

122

Start:

14966

End:

15087

Strand:

+

>Scaffold14452_rRNA_10

TTTGGCACCTCGATGTCGGCTTAACTTATCCTCATGGATGCAGAAACTATGTAGGGTGCGACTGTTCGTCGATTAAAAAGTTACATGAGCTGGGTTAAATACGTCGTGAGACAGTATGGTTT

Boechera stricta (v1.2)

ID:

Scaffold14477_rRNA_11

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

1568

Start:

1

End:

1568

Strand:

-

>Scaffold14477_rRNA_11

GAATTACTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTGGCCATCGCAATGCTATGTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCAGTTCTAAGTTGGTTGTTAAACGTACGCCGGACGGCCGAAGCCTGCTAAGGACATCAGCGCTCGGATGCTGGCTGCCGCCGGCCGGTTGCCCGGCTagtggcggcctGCTCCCAAGGCGTCCTTCCAAAGCCCAACGTACCCAACCCTTAGAGCCAATCCTTATCCCGAAGTTACGGATCTATTTTGCCGACTTCCCTTATCTACATTGTTCTATCAACCAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATGAGTACGACCTGGCGTGAGAATTATTCCCTCCCGCGGATTTTCAAGGGACGTCGAgagcgcaccggACCCAGCAGAGGTGCTGGGCTCTTCCGGCCATTAAACCCTAGCTCCGGATAAACCGATTTCAGGGTGAGAGACCGTTAAGAAGAAAAGAGAACTCTGCCCGGGGCTCCCGCCGTCGTCTCCGCGTTCAGTTGCGTTGCCGCGCAAAACCCACATCCAGGTGCCGGAATATTAACCGGCTTCCCTTTCGCCACACGGCGCGAAGTGCGCCTTTGAAACGGAACTTCCCTATGGCTTAGGATCGACTAACCCATGTCCAACTGCTGTTCACATGGAACCTTTCTCCACTTCGGTCCTTCAAGTTCTCATTGAAGTATTTGCTACTACCACCAAGATCTGCACTAGAGGCCGTTCTACCCGGGCTCACGCCCTAGGCTTCGTCACTGACCTCCACGTccgcctactcCTCAGGGCTTCGTTTCTACCCTGAGGGCGAGGTATGGGTGGGACGCTTGAGCGCCATCCATTTTCAGGGCTAGTACATTCGGCAGGTGAGTTGTTACACAGTCCTTAGCGGATTCCGACTTCCATGGCCACCGTCCTGCTGTCAAGATGTACTAACACCTTTTGTGGTGTCTGATGAGCGtccactccggcaccttaacCTCGCGTTCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTAGTGTTGTTCATTCGAATGCCCACGTTCAATTAAGTAACAAGGGCTTCTTACATATTTAAAGTTTGAGAATGGATGAAGGCTATATAGCGCCCCCGAGTCCCTAATCATTCGCTTTACCTCATAAAACTGAGTTCAACACTGCTATCCTGAGGGAAACTTCGGCGGAAACCAGCTACTAGaaggttcgattagtctttcgcccccatgcccatatttgacgatcgatttgcacgtcagaaccgctgcgagcctccaccaGAGTTTCCTCTGGCTTCACCCTATACAGGCATAGTTCACCTTCTTTCGGGTCCGGCCCCGTATGCTCTTACTCAAATCCATCCGAGAACATCAGGATCGGTCGGTGATGCGCCGAAGCTCTCACCTGCGTTCACTTTCATTACGCGTAGGGGTTTTACACCCGAACACTCGCATACGAAGACGACTCCTTGGTCcgtgtttcaaGACGGGTCG

Boechera stricta (v1.2)

ID:

Scaffold14477_rRNA_12

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

417

Start:

1772

End:

2188

Strand:

-

>Scaffold14477_rRNA_12

CGCTTCCCTTTCAACAATTTCACGTACTTTTTAACCCTCTTTTCAAAGTGCTTTTCATCTTTCGATCACTCTACTTGTGCGCTATCGGTCTCTGGCCGGTATTTAGCTTTAGAAGACATATACCTCCCATTTTGAGCAGCATTCCCAAACTACTCGACTCGTCGAAGGAGCTTTACATAGGCTTGGCATCCGACCAGACGGGGCTCTCACCCTCTGTGGCGTCCCGTTCcagggaactcgGAAGGCGCCTCGCCAAAAGCATCCTCTACAAATTACAACTCGGGCCCTGGGGACCAGATTTCAAATTTGAGCTGttgccgcttcACTCGCCGTTACTGGGGCAATCCCTGTTGGTTTCTTTTCCTCCGCTTATTGATATGCTTAAGTTCAGCGGGTATTCCTACCTGATTCGAGGTC

Boechera stricta (v1.2)

ID:

Scaffold14477_rRNA_13

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

84

Start:

2698

End:

2781

Strand:

-

>Scaffold14477_rRNA_13

TCGGTAATGATCCCTCCGCTGGTTCACCAACGGAGACCTTGTTACGACTTTTACTTCCTCTAAATGACCGAGTTTGGAGAGCTT

Boechera stricta (v1.2)

ID:

Scaffold14547_rRNA_14

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

308

Start:

6932

End:

7239

Strand:

-

>Scaffold14547_rRNA_14

GACCTTTTATCTAATAAATGCATCTCTTCCAGAAGTTGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGttatcagagtagtagtaaccatcaaacaaactataaatgatttaatgagccattcgcaatttcacagtctgaattcgttcatacttacacatgcatggcttaatctttgagaCAAGCATATGACTACTAGCAGGATCAACCAGGTAGCATTCATCGATCACAACAATTCTCCGCCACATTCTCGCTAACGCTAAGGAAAAAAAGAACGGACGAGGTCTTAGCCGTCATCTTTT

Boechera stricta (v1.2)

ID:

Scaffold16327_rRNA_15

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

575

Start:

67290

End:

67864

Strand:

+

>Scaffold16327_rRNA_15

ACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTACATGGTCGTTCTTAATTGGTGGGGCGATTTGTTTGGTTAATTCCGTTAACGTATGATACCTCAGCCTGCTAACTAGCTACGTGGAGGCATCCCTTCACGCCCGACTTCTTAGAGGGACTATTGTCATTTAGGCCAACGAAGTTTGAGGCAATAACAGGTCTGTGATATCTTAGATGTTCTGGACCGCACGCGCGCTACACTAATGTATTCAACGAGTTCACACTTTGGCCGACAGGTCGGGCAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTtggtcttcaacgaggaatttctagtaagcgcgagtcatcagctcgcgatgactacgacCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGATGAAGTATTCGAATCGCGGCGACATAGGTGGTTCGCCGCCTGCGACGTCGCGAGAAGTCCATTAAACCTTATCATTTAGAAGAAGGAGAAgtcgtaacaagGTTTCCGTAGGTGAACCTGCAAAAGGTCATTGTCGATACCTGT

Boechera stricta (v1.2)

ID:

Scaffold19424_rRNA_16

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

824

Start:

3724626

End:

3725449

Strand:

-

>Scaffold19424_rRNA_16

ACAATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAagatcaaggtcggttggcggtgcacccgcgagggatcccgccaatcagcttccttgcgccttacgggtttactcacccgttgactcgcacacatgtcagactccttggtccgtgtttcaagacgggtcgaatggggagcccacaggccgacgcccagagcacgcagatgccgaggcacgccgttaaggcgcgtgctgcagaccacgATCACGGCAGCGACGTCTCCGGGGGCGTATCAAAAGCCCGGGCTTAGGCCACCGCCGTAATCTGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCAGATTGCTCCGTTCCGcatccgaccgggacgcatcgccggcccccatccgcttccctcccaacaatttcaaacactctttgactctcttttcaaagtccttttcatctttacctcgcggtacttgttcgctatcggtctctcgcccgtatttagccttggacagaatttaccgcccgattggggctgcattcccaaacAACCCGACTCGTAGACAGCGCCTCGCGGTGCGACAGGGTCCGGGCACGACAGGGCTCTTACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGGACCCGGTCCGTCACTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTtcaagctgggctcttcccggttcgctcgccgttactaagggaatccttgttagtttcttttcctccgcttattgatatgcttaaactcagcgggtgatcccgcctgacctggggtcgc

Boechera stricta (v1.2)

ID:

Scaffold19427_rRNA_17

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

313

Start:

120829

End:

121141

Strand:

-

>Scaffold19427_rRNA_17

TAAGGTTTTTTGCTTTGCATCGAATTAAACTACATGGTCTACCGTTTGTGCGGAACCCCGTCAATTTTTTTGAATTTCATTCTTGCGAACGTACTCTATAAACAGAATATTTAACGTGTTAACTATAACACTGCACGGATCGATATGCACAATGCCTAGTATATATCGTTTACGGCTAGGATTACTGGAGTATCTAACCCTATTCGCTCTCCTAACTTTCATCTCTTAGTATCAGTGTCGGCCCAGCATAATGCTTTCGCCGTTGATGTTCTTTCCGATCTCTACGCATTTCACTGCAAATGATTATCCAATA

Boechera stricta (v1.2)

ID:

Scaffold20129_rRNA_18

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

637

Start:

2874424

End:

2875060

Strand:

-

>Scaffold20129_rRNA_18

ttctgcttaccaaaaatggcccacttggagctctcgattccgtgggacgactcaacaaagCAGCCGCCCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTACACCCCCGATACCTCTAATCATTGGCTTTACCCGATAGAACTCGCATCCGAGTTCCAGCTATCTTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTcacccctatacccaagtcagACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACTAGAGTTTCCTATGGCTTCGCCCCGCTCAGGCATAATTAACCATTTTTCGGGTCCCGACAGGCATGCTCACACTCAAACCCTTCTCAAAAGATCAAGGTCGGTCGGCGGTGCACCCGTGACGGATCCCGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTggctcgcacacatgtcagactccttggtccgtgtttcaagaccggtcgaatggggagCCCACAGGCCGACGCCCAGAGCACGCAGATGCCGAGGCACGCCGTTAAGGTAGGTGCTGCAGACCACGATCATGGCAGCGACGTCTCCGCGGGAGTATCAAAAGCTCGGGCTTAGGCCGCTGCCGT

Boechera stricta (v1.2)

ID:

Scaffold20129_rRNA_19

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

99

Start:

2880408

End:

2880506

Strand:

-

>Scaffold20129_rRNA_19

CCGTAATCCGCATCGGTCCACGCCCCGAATCGATCGGCGGACCGGATTGCTCCGTTACGTATCCGACCGGGACGCATCGCCGACCCCCATCCGATGCCC

Boechera stricta (v1.2)

ID:

Scaffold2199_rRNA_20

Class:

Retrotransposons

Order:

Ret_other

Superfamily:

rRNA

Length:

126

Start:

731615

End:

731740

Strand:

-

>Scaffold2199_rRNA_20

AGTCATAATCCAGCGCACGGTAACCAGGCGTGATGACCAATTGTGCGAATCAATGGTTCCTCTTGTACTAGGTTGAATTACTATCACGACGCATGCGGGCATCAGTAGGGTAACCTGTCTCACGAC