Boechera stricta (v1.2)
ID:
Scaffold10040_LTR_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
163Start:
54117End:
54279Strand:
->Scaffold10040_LTR_1
ATATTATTCAAAAAATGTTAAGGGAAATATTGATAAAAAATCAACAAATATTTATCCCATAAATATTATCTTAGTGGGCCTAAAACCCCACATTCACCAAGACCCAAAGCTCGAGCCCGGCTTGCTTATGTGTGTGTTTTGCATAATGGTCCTCTCACTCCTT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
616Start:
576035End:
576650Strand:
+>Scaffold10040_LTR_2
AGATGCATTAAGGTTGCATTTATTCCCGTTTTCACTTAGAGGTGACGCGCATGAGTGGGAGAGGAAAATCCCATCAAAAACTATTACGACGTGGAGTCAATGCCAGAAAGCATTCTTGAAGAAGTTCTACTGTAACGCTAGGACAGCTTATTGGAAAAACAAGAAATCAAACTTCACGCAACAAAACACCGAACACTTTAGTGAAGCTTGGAAGAGGATTGTAGAATACACCAGACAATGGCTTCATCACGGATTTAGGGACGAATGCTTGCGGAGCATGTTTTACAGAGGAATCACTCGTAAACATTGTATGATGCTAGATGTTGGTGGTTGTAGACGTTTCTTGGGACAAGACGCACACCAAGGGAGAACATTAGTGGAGAATCTAGACGAGAGTGAAGCATCTTATAGAGAAGACTACAATCAAGGAGACATCTGTGAAGATGAGAAAAAGGCGACCATCAATGCACTGCTCGAAAAATTAGACAAGATTCTGGAATCGACGCAATAGTTTGCAGCATCAACGCCACATAGAGGAAAATGACATCGACCAGAGAGGATCGATGGCCACTCCAGAAGCATCGTCGAATGGGAGCGTCGACTCTACCATGTCGAT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
3972Start:
577136End:
581107Strand:
+>Scaffold10040_LTR_3
AGACCAATCATTGCGACAGAAGGCCAAATCATGGAAAAGGGAGATACAACCCTCGAGAAAGAAAACCCTTTTGAATTTGAAGAAGAGCCCAAAGCTAAGGAGATAATCACTGAGATGTGGAAAGAGACTAAGGAGCCCAACGCTGATACAACCGACATTCGTGTAAGAGAGTCCAACACTAGTGTGAGGAGTCAAGTGATGTCTGAACTGCCCAAATATCATCCGAAAATCCCTTTTCCGAGAAGAATTAAAGGAAGAATCGTGGACAGGATGCGGAACACATTCGAAAAACAAATGGAGTAATCATCACTATGTCGATACTTGAAGCCTTGATGATGATTCCTAATGCCAGCAAGTTCCTCAAGAATCTCATAACTAATAAGAAAAAGGAACTAACCAAAGTAGCATTCCTAACGCACGAGTGTAGCGCCATTATTCTTGACAAAAAGATTCCGGAGAAGTTAGACGATCCGGGTAGCTTCACTCTTTCATGCACCCTCGGTCAGATAACCTTCAGGAGATCTTTATGTGATCATGGGGCTTGTGTGAATCTCATGCCTCTTTCCATCGCGAGAATGCTGGGACTAACTAATTTCAAGGAATGTAGGATGTCACTTGGTCTCGCCAATCGTTCGATAAAAACACCGATAAGGTTGCTTGAAGTCATCCCAGTGATGATTGAAGAATACCAAATTCCGACCAACGTCAATATACTCAAAATGGATCACGAGCCTAGGGATCCACTCATCCTAGAAAGACCATTCCTAGCAACCGCGGGAGCCATCATCAATGTTAAAAATGGAAAAATTGACCTTCACTTGAACGATGAAGTTATGCGTTTTAACTTCGATGAGGTGATGAAGAAACGTGAGGAGTGAGATCGTATCTTCTACCTAGATGATCTCGACCTACTAGCTGATGATATGACAAATAAAGTTAGTGATGCAGTACTAACCGAAGAACTTCAAAAACCACAAATCGAAGAAATGGCGGAGATGATACCATGAGAAATGGCTTATGCAATGATGACTGATCATGACAAAGAAGCAGCCACAGATGAAACAAGCAAGGGTAAGGCTTGTGAGGACAACGATTGGAGCGAACTCCAAGCACCAAAAGTGGAGTTGAAACCACTACCGAAAGGTCTAAGGTACGCATTTTAGGACCGAACTCGACTTATCCTGTCATCATAAGTGATGAGCTTAATAACGATGAAACTGATATGTCGCTTAAAGAATTAAGAAAGTATATAAAAGCCAAAGGATATTCTCTAGATGATATAAAAGGAATATCTTCATCTTTATGCATGCATAGGATACATTTAGAAGATGAATCTAAAAATTCTATGAAACCTCAGAGACGTTTAACCCAAACTTAAGAGATGTTGTTAGAAAAGAGATTCGTAAACTTCTAGATGCAGGTGTTATTTACCCTATTTCTGATAGCAACTGGTTTCGTCTGTTCATGTAGTTCCTAAGAAGGGTGGTATCACCGTAATAAAAAAATTAAAATGATGAATTAATTTCTACTAGGACTATAATGGAACATAGAATGTGTATAGATTTTAGGAAATTAAATACCGCAACTAGAAAATATCATTTTCCTCTCCCATTTATTGAACAAATGTTAGAACGGTTAGCATGTCATTCTCACTATTATTTTCTAGATGGGTTTTCAGGATTCTTTCAAATCCCGATTCATCCCATGATCAAGAAAAAACGACATTTACCTATCCGTATGGCACTTTTGCTTATCGAAAAGATGCCATTCGGGCTATGTAATGCACCTGTAACTTTTCAACGGTGTATGATGTCGATATTTTCAGACTTAAATGAATCAGTAGTGGAAGTGTTTATGGACAATTTCTCTGTATATGGCTCTTCGTTTGCTGGTTGTTTGTCTAATTTATGCAAGGTACTTAAACGCTGGGAAGAGACAAATCTTGTGCTAAATTGGGAGAAATGTCATTTCATGGTAAAAGAGGGAATCGTTCTTGGGCACAAGATCTCGGAGAGAAGAATTGAAGTTGACAAGGCAAAAATTGATGTGATGACAAGTTTAGGACCTTCAAAAACGGTGAAGGATATACAAAGTTTTCTTGGCCATGCTGGATTTTATCGAAGATTCATCAAGGATTTCTCAAAAATAGCAAGACCACTAACTAGATTGTTGTGCAAGGAGGTGGCATTCAACTTTGATGACGAGTGTAGCAAAGCATTCCGATCACTTAAGAAAGAGTTGGTGAGTGCATCGATAGTACAACCGCCGGATTAGGGGTTACCGTTTGAAATCATGTGCGACTATGCGGTAGGAGCTGTACTCGGACAATTAAAGGATAAGAAGCTAAATGTCATCTATTATGCAAGTAGGACGCTAGACGAAGCACAAATCAATTACGCCACTACAGAGAAAGAGCTGTTGGCGATCGTGTTTGCTTTCAAAAAGTTCCGCCAATACTTAGTTGGGTCTAAGGTTGTTGTACACACTGATCATGCAGCACTAAGGTATCTACTGGCAAAGAAGGATGCAACACCAAGGGTACTCTATGGATACTACTTCTTCAAGAGTTCGATTTGGAGATAAAAGACAATAGAGGAATAGAAAACGGAGTAGCTTATTATCTTTCTCGATCGAGGCCGAGATACCTATTGACGATTCACTAccagaagagcAAGTCTACACTATTAGAGTACTTGTTGGCGAGCACTACCTCAACAAGGATCTGAAGAGCATCAACACCATCAAGAATAAATTGCCATGGTACACTGACATCGTCAACTATCTCGCTTGTGGAGAAAAACCGCCCGATCTTGTCAGATACCGTAAGAAAAAGTTCTACAAGGAGATAAACCGATACTATTGGGATGATCCGAACCTCTACatgctatgcaaGGATAAGATATATAGAAGATGTGTCCCAAAGAATGAAGTTCACGTGATTTTGATGGGATTCCATGGATCAACGTATGGAGGACATTTTGCTACTTTCAAGACGGTGGCTAAAGTTTTACAAGCTGAATTGTTGTGGCCAACTTTATTTAGAGATGCTCATCGATTCATCCTAGCttgtgatgcaTGTCAAAGAAGAGGAAACATAAGTCGAAGGAACGAGATGCCTAAAAACCCGATAATAGAGGTATAAGTCTTTGACGTGTGGGGCATCGATTTCATGGGACCATTCGCAAACTATCATGGTAATAACTACGTCGTAGTGGCGGTTGATTACGTATCTAAATGAGTAGAAGATGTGGCGAGTCCAACGAACAGCGCGAAGGTAGTTCTTAAACTTTTTAAGAGTATCATTTTCCCGTGTTTCGGAGTTCCGCGAGTGGTGATTAGCGACAGAGGAATGCACTTCATTAACAGAACTTTCGACAAACTCCTAAGGAAGCATGGCGTTAGACACAAAGTGGCAACGCCCTATCATCCTCAAAAAATTGGACAATTGGAGGTTTCAAATCTAGAGATCAAATCAATCTTGGAGAAGACGGTGAATATCTCACAAAAGGATTGGTCACTGAAGTTAGACGATGCTCTGTTGGCTTATTGAACAGCTTTCAAGACTCCCATTGGTACAACTCCTTTCAATCTTTTATATGGGAAGTCTTATCATTTGCCGGTTGAGCTCGAGTACAAGGCTATGTGGGCTGTCAAGATGCTGAACTATGACATAAAAACCGCTGTGGAGAAGCGCCTAACAAAACTGAACGAGCTAGACGAGATTCACCGAGACGCTTATGAGAATGCTCGGATATACAACAAGAAGACTAAGGCATTCCATGACAAGAGAATACTTCGAAGATAGTTCAGGGAAAACGATCAAGTTCTACTATTCAACTATCGTTTGAAGCTCTTTCCGGAAAAGCTCCGATCTCGTTGGTCAGGCCCCTTCAAGATAAAGTCTGTAACGCCTTACGGAGCTATATAACTATGGGGCAATAGTGGAGAGAACTTCAAGGTAAGCGGACAGTG
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1692Start:
1546587End:
1548278Strand:
->Scaffold10040_LTR_4
TTCCTCGAAATCTTTTTGTCGAGAATAACCGCACTAGACTCGTGTGTTAGGAATGCCACCTTGGTTAACTCCTTTTTCTTCTTAGTTATGAGATCCTTGAGGAACTTGCCGGCGTGGGGAATCATTGTCAAGGCTTCTAGTATAGGTATGGTGATGGTTAAACCATTCATTTGCTCCTCAAATGCGTTCCTCATTCTCTCTATTATCCTTTCCTTAATTCTTCCCGGAAAAAGAATCTTGGGTTGATATTTGGGTAGATCGAGAATCGCTTAACTCCTCTTTCGAGTATTAAGCTTCCTTGTACGAGTGTTGGGATCCTCATCCTTGTCCAGTTTCTCCTTAATGATTTCTTCAATCTCAGGCTCTTTCTCTAGTATAATGGGATCTTCCTTCTCGATGGTTGGATCTTCTTTCTCGATGTTAGCCTCTTCACTCTTTTTATTGAATAGTTGCTTTTGTGGAATCGGTATGGGTATGAGCTCCTTGCTACTCTTCAAGGTTATCGAATTGATCGTCGGTGTCTCCTCCATCGTCCTAGTTTCCAGCTTTTGATCTAAGTCTTCGAACCTCTCATCAAACTCGTGACACCGTTGATTAATTTCTTTGAATTCTACACTACTCCTTGTGACCATGCTTGTTTGCCCTTCTAAGACGTTTTGTACTATCTCCTCGAGGTTGTCCGCCTTAGTCGTCAAGAAATTATCCTCCTCATTGTTCTCAGCAAGAGCATCGACCACGCTTGGTCGATGTTCTGGTCCGATGTGAAAGGCATCGACCATGTACGATTGATGTGTTTGATCGATGTTAATCTCCGGTGTTGCATCAAAGGCATACGATCGATGCTTCTCTTCGATGATGCTTCTAAGAAGGCCATCGACCCCTCCTGGTCGATGGTGTTGTTCTCCACGTTGTTTTGATGAGACGAAGTGTTGCGTTGAATTCTGAATTCTGTCCACCTTTTCGTGTAGCGCTTCTATAGTCAGCTTTTCTTCATCTTCATGAATGTTGACGTGTATGCTCATTCGGTCGTAGTCCTCTCCATAGCTCACGTCACTTCCGGCTAGATTCTCCACCAACGTCTTGCTCCAAGAAAGTTCCATGGCTAGCTACGTCTAGTAGCATACGGTACTCAGGTTTAGCTCCTTGGTAGAAAATGCAAAGTAATGACTCATCGCTGAATCCATGATGGAGACATTGTTTGGTGTAGCCTACAAGTCTCTCCCACGCTTCTCCGAATCTCTCTATGCTTTGTTGTGTGAAGTTTGATATCTCGCTTCTCCAACGAGCTGTCATAAAGTTCGTGTATAACTTTTTCAGGAATGCTTTCCGGCATTGACTCCACGTTGTAACGGTCTCTGATGGAATGCACTTCTCCCACTCTTGTGCTTTACCCCCAAGTGAGAATGGGAATAAACGAAGTTTTTGTGCATCTTCAGAGAGACCATCTATTTTCACCAAGTCGCATAACTTGTCGAATTGATTTAGATGATCCGTTGATAAACCATGAAACTTATTGCCTTCGATCATCTTAATAAAGCTGATCAAGTCGAATTCAACATCCACCACCGGTGGTGGTCAGATTCCAAAGCGTGGAATGTAGCTTGTTGGCTCGTCGACCATGCCTATTGTACTTGTAGCCCTTAGTCTACGCATCACGTTCTCGTCTATTCAGTCCAGCAACTGGTTCATTTT
Boechera stricta (v1.2)
ID:
Scaffold10199_LTR_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
88Start:
18313End:
18400Strand:
->Scaffold10199_LTR_5
ACGGCGGCGACGGCGTGCGCATAGTTTTGCATAAAGGTCATCTATCTCTTGCACCATAGTGTCTTCTTCACAAACATAGTGAACCTTG
Boechera stricta (v1.2)
ID:
Scaffold10199_LTR_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
86Start:
858810End:
858895Strand:
->Scaffold10199_LTR_6
GCTCAACTTCGTCCAACACACCATCAACCAACAAGTCGAGATCGTCTATGTAGAAGATTGGGTCTTGTTCTTCGATTTTCTTTACC
Boechera stricta (v1.2)
ID:
Scaffold1040_LTR_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
5095Start:
912849End:
917943Strand:
->Scaffold1040_LTR_7
TGTCCGTTCACCTTGAAGCACTCTCCATTGTTATCCCATAGCTCTATAGCTCCGTAAGGTGTCATAGAATTGATCCTGAAAGGCCTGGACTAGTGAGATCGGAGTTTGCCCGAGAAGAGTCTTAAGCGGGAGTTGAAGAGTATAACTTGATCATTCTCCTTAAACTACCGTCTAAGTATCTTCTTGTCATGGAATGATTTAGTTTTCTCCTTGTATATTCGAGCATTCTCATAAGCATTAAGGCGAATCTCGTCTAGTTCGTTTGCGGCGGTCTTGATATCATAATTCAACATTTTTACGGCCCACATGGCTTTGTACTCTAGCTCCACCGGTAGATGACATGATTTTCCATAAAAAAGGTTGAAAGGAGTTGTACCAATGGGTGTCTTGAAGGCAGTTCTGTAAGCCCATAGAGCATCGTCTAGCTTTAAAGCCCAATCTTTTCGAGAAATATTCACCGTTTTTTCTAAGATTGCTTTGATTTCTCGATTCGAAACCTCCACTTGCCATTTGTTTGAGGGTGATATGGCGTTGCTACATTATGTTTTACACCATGTCGTCGAAGGAGCTTCTCAAAAGTTCTGTTAATGAAGTGCGTTCCTCCGTCGCTAATCACCACTCGCGGAACTCCAAATCGTGGGAATATGATGCTCTTAAAAAGTTTAAGAACTACCTTTGCGTCATTTGTTGGACTTGCTATAGCTTCCACCCATTTAGATACATAATCAACTGCTACTAAGATGTAGTAGTTGCCATGAGAGCATAGGAAAGGTCCCATAAAGTCGATGACCCACATATCGAAGACTTCAACTTCCATTATCTAGTTTTGAGGCATCTCGTTCCGTCAGCTTATATTTCCTTTTCTCTAACAAGCATCACAAGCTAGGATGAATTGGTGGGTATCTTTTAATAGAGTAGGCCACCAAAATCCAGCTTGTAGAACCTTTGATACCATTTTGAATGTAGCGAAATGACCTCCATATGTTGATCCATGGCACCTTGTCAGAATCCCTTGCATTTCGTTGTCTAGAACGCACCTTCTATAAATTTTATCCTTGCATAGTGTGTATAGGTGAGGATCGTCCCAATAGTACCTATTGATTTCCTTAAAAAAAATTTCTTGTGGTAGCCAACGAGATCAGGTGGTTTCTCTCCACAAGCGAGATAATTAACGATATCTGCGTACCATGGTGACTTCTCTTTGATAGCATCAATGCTCTTCAGCTCCTTGTCGAGATAGTGTTCTTGGACAAGCACCCTAATAGCGAAAACTTGCTCCTCTGGCAGTGAGTCACCAATCGGTATATCGTCTTTAATTCGCATTCTCGAAAGGTGATTAGCCACTCCATTCTCTATTCCTTCCTTATCTTTTATTTCCAAATCAAATTCTTGGAGGAGTAGTATCCAACGGAGTAATCTTGGTTTTGCATCCTTTTTGGCGAGAAGATATCGTAATGCAGTATGATCTGTATGAACGATGACTTTCGAGCCCACTAAGTATTGTCTGAATTTCTCAAAAGCAAAAACGATCGCTAGAAGTTCTTTCTCTGTAGTAGCATACTTCATTTGCGTCTCTATAGCGTTCTGCTTGCATAGTAGATAATATTCAGCTTCTTATCTTTTCGTTGTCCAAGAACGGCTCCTACTGCATAGTCATTAGCATCGCATATAATCTCGAATGGTAGTTCCCAATCTAGCGGTTGTACTATCGGTGCGCTTACCAGCTCCTTCTTGATCATTTGGAAAGCCTTGAGGCACTCATCGTCGAAACTGAATTCGACCTCCTTGCATAAGAGTCTTGTGAGAGGACGTGTTGTCTTAGAAAAATCTTTGATAAAATCCAGCATGTCCGAGGAACCTTCTATATCCTTCACCATTTTTGGAGGTCTAGGCTCATCATCACCTCGATCTTAGCTTTGTCAACCTCTATTTCTTTTTCTGAAATTTTGTGCCCAAGAACGATTCCTTCCTTTACCATGAAATGACACTTTTTCCAATTAAGCACGAGGTTTGTCTCTTCACAATGCTTGAGTACCTTGCATAAATTAGACAAAAAACCAAACGAAGAACCATACACAGCAAAATCATCCATAAACACCTCAACTACTGATTCGATTAAATCAGAGAAAATTGACATCATACACCTCTGAAAAGTTGCAGGTGCATTACATAATCCAAATGACATTCTTCGATAAGCAAATGTATCATAAGGACATGTAAATGTCGTTTTTTCTTGATCATGTGGGTGTATCGGAATTTGAAAAAATCTTGAATATCCATCTAAGAAACAATAGTGGGAGTGATTTGCTAATCGTTCTAACATTTGATCTATAAAAAGAAGATGGAAATGATCTTTTCTAGTTGCCGCATTTAATTTCCTAAAATCAATACACATCTTGTGTCCTGTGATAGTTCTAGTGGGGATTAATTCATCATTGTCATTTTTTATTACTGATATTCCATGTGCTATCGGAAATAGGGTATATAATTCCAGCATCTAAAAGTTTAAGAATTTCTTTTCTTACGACATCGCACAAATTTGGGTTCAAACGCCTTTGATGTTCAATGGAATTTTTAGTCTCatcttctagatGTATCCTATGCATGCATAAAGATGGAGATATTCCCTTAATATCCTCTAGAGAGTATCCTATAACTTTTTTATATTTTCTCAACTCACTAAGTAAAGCTGAGGTTTCAGCATCACTAAGCTCATCACTTATTATTACAAAATATGTTGAGTTAGGACCAAGAAATGCGTACCTTAGCCCTTTTGGAAGTGTCTTTAGCTCTACTTTAGGTGCTTTTAGCTCGCTCCAATCATCATCATCGCAAGAATTACCAATGCTTGCTGGTTCTATGATCTCCTCGTCTTGTCCGGTTAATTGTACAGAAAACATATCACGAGGTATCATTTTTGCCATTTCTCCATTTTGTAGCGTTTGAAGCTCTTCACATAGCTTCTCGTCTTTCAAAGCTATTTCAGCTAGAAAACTATCTGCCAGCAAATCGAGGTCGTCGATGTAGAAAAGACGATCTCGTTCCTCGGGCTTTTTCATCATTTCATCAATGTTAAACTGCATGACTTCATCATTTAGATGAAGATCAATTTTTCCATTCTTCACATCGATGATGGCTCCTGCGGTGGCTAGGAATGGCCTTCCTAGTATGAGTGGATTCTTGGGCTTTTGGTCCATCCTCAGTATCACAAAATCAGTTGGTATTTGATATTTTCCAACCATCACCGAGACGTCTTCAAGTAGTTCAACTGGTGTTTTGATTGACCGATCAGCGAGAACgagtgacattCGACATTCTTTGAATTGAGTGAATCCTAGCTTTTGTGCTATGGATATAGGCATGAGACTCACACTGGATCCAAGATCACATAGGGATTTTCCAAATGTCACGGTACCTAAAGTACACAAAAGAGTGAAACTTCCCGGATCATCTAATTTCTCTGAAATCTGTTTGTTAAGTATAACGGCACAACACTTGTGAGTTAGGAACACCACCTCGGTGTGCTCCCTTCTTCTTTTTAGTTGCGAGATCCTTGAGAAATTTGCTGGCATTAGGAATCATCGTCAAAGCATCTAGCATTGACATAATGATGATCACTCCTTTCATTTGTTCTTCAAAAGTATTCCTCATTCGATCCGCCATTCTCTTTTTTTATTCTTTCTGGAAAAGGAACCTTGGGTTGACAATTGGGTATATTCAGTACTGCCTAGCTCTTTTCGCGAAGTGGAGGTTCTTTGCTTGTATCTGGTCTCTCCTTAGTCATCTCTACAATCTCAGGTTCTTCTTCTACTATGATGGGATCTTCTTTCTCAAAATTAGTCTCCACGCTCTTCTTGTTGATCAGTTGCTTGGGTGGACTTGGTTTGAGCTCCTTTCCACTCTTCAAAGTAATGGCATTGATCGTTGGTGCATCTTCCGTTGCTCGAGTCTCCAACTTTTGAACTTTTAAAAATAATTCCTCAAACTTTTCGCTTAAATAGTCACATCTTCGATCAATGTTCTTGAATCCTTCACTAATCTCTGCACCCATTCTTGTCTGTCCATTCAAAACATATTGAATTTCTGCTCCAGATTTATCCATTTCGGTTGTTGAACAGCTTGCCTCACCATTGTAATTAGAAGGCATATCGACCGTGATAGGTCGATATTTTTGGTCGATCCACATGACATCGACCTCGTTTGGTCGATGGCGTTGGTCGATGTTATCTTCTGATTTTGCATCGAATATGTTTGGCCGATGCATGTGACCGATTCTTCTTTCTGGAAAATCTTCGACCTCATTTGGTTGACGGTGAGGTTCTTTTTGCTGACTCAAAATTCTGTCTATCTTCTCGTGCAGTGATTCTATGGTTCTTTTCTCCTCATCTTCATGGATGTCAACGCGTCTACTCGTGTGATCGTATTCATCTCCATGTCTCATGTCACTTTCAGCTAAGTTCTCCACCAATGTCATTCCATGTTGAGCTTCTTACCCCAAGAAAGTTCCATGGCTAGCTACGTTGAGTAGCATACGATACTTAGGCGTGACTCCTCTGTAGAAAATGCTTAGTAGAGACTCGTCAGAATCCATGATGAGGACATTGCATGGTGTATCCTCTCATTCTTTGCCATGCTTCTCCGAAGCTCTCAGTGTTTTGTTGCGTGAAGTTTGAAATCTCGTTTCTCCAACGAGCTGTCCTTGAGCTCGAAAAGAACTTTTTTAGGAAGACTTTTTTGCATTGACTCCACGTTGTAATGGTCTCTGATAGAAGGTATTTCTCCCATTGGCTTGCTCTACTTCCAAGTGAGAATGGAATTAGACGAAGTTTCAGTGCATCTTCAGAGATCCCATTAATCATAACCGTATCACATAGTTTATCAAACTGGATTTTCAGTTGATAAACCATGAAACTTGTTATCTTGAACCAAACGAATCAAATCGAACTTGATCTCAAATTCGACATTCTCCACGGTTGGACGGATTCCTATGCAGTGGCTGTGACTTGTTGGCTCGTCGGCCATGCCTATTGTCCGTACTGTTCTCTGCCTTCGTACAACATTCTTTTCTCCCCAGTCCAGCAACTAGTTCATCTTT
Boechera stricta (v1.2)
ID:
Scaffold1040_LTR_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
147Start:
967417End:
967563Strand:
->Scaffold1040_LTR_8
CTCGCGGAACTCCGAAACACGGGAAAATGATGCTCTTAAAAAGTTTTAGAACTACCTTCGCATCGTTTgttggacacgCCACAACTTCTACCCATTTAGATACATAATCAACCGCCACTAAGCTGTAGTTGTTACCATGAGAGTTCG
Boechera stricta (v1.2)
ID:
Scaffold11886_LTR_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
570Start:
14265End:
14834Strand:
+>Scaffold11886_LTR_9
GCTGATGGATCCGATGGACGAGAGAGTGAAGCATATGCTAAGGGCAATCAGAATAATCGGCATGGCCGATGAGCCAACTAGCCAATGCCACCGCACGGGCATCCGACCTTCATCTATGGGCGATGTCGATTTCGAAATCGAGATTGGCTTGATTAACATGATCTAGGGCGAAAAATTTCACGTCCTATCAATGGAGAATCCTATGGATCATCTGAATCAATTCGACAAGTTGTGCGAGTTGGTAAAAATAAATGGTGTCTCTGAAGATGCACTAAAACTTTGTCTATTTCCATTCTCACTTGGAAGTGGAGCACATCTGTGAGAAAAGCACCTTCCATCAGAGACCATTACAACGTGGAGTCAATGCCGCAAAGTATTCCTAAACAAGTTCTTCTCGAACTTTATGAAAGCTCGTTGGAAAAACGAGATATCAAACTTCACACAACGAAACACTGAGAGCTTTGGAGAAGCGTGGGAGAGACTTGTAGGCTACACCACGCAAGGTCCTCACCATGGATTTAGCGATGAGTATTTACTAAGTATTCTCTACCGAGGAGTGACACTGGAGTA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
206Start:
134144End:
134349Strand:
+>Scaffold12302_LTR_10
TCACGAAAAACAGCATCACCAATCCATAGATACCGATGGTAATCCTGGAAAAATCAACGAACACCAACATCGACCAGAGCGTCGACTACACAAGATCGACGCCGATATATCAGGGAAGCTTGTCAAGGGGCAACATCGATCAGGAGAGATTGATGCTTTCTCAGATGGAAACATTGAGCAACACAATTGACCAGGAGCGGTCGATG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
578Start:
135058End:
135635Strand:
+>Scaffold12302_LTR_11
CGTTCCTAACACATGAATGCAGCGCGGTTATCCTCGACAAAAAGATTTCAAAGAAATTAGACGATCCGGGCAGCTTCACTCTCTCTTGCAGTATAGGTCCAATAACATATGGGAGATCTCTATGTGATCTTGGAGCTAGTGTGAACCTCATGCCTCAGTccattgcaaaaaatttgggattcaatacattcaaagaatgtaggatgtcactcgttcTCGCCGATCGCTCGATAAAAATGCAGGTTGGATTACTCGAAGACATCCCGATGATGATTGGTGACTACCAAATTCCAACCGAGTTTGTGGTACTCAAGATGGATCACCAGCCTAAAGATCCACTCATCCTAGAGAGACCATTCCTAGCAACCGCGTGAGCCATCATCGATGTTAAAAACAGAAAaatcgaccttCACCTAAACGACGAAGTAATGCAGTTTACTATCAACGAGGTGATGAAAAAACCCAAGAAACGAGATCGTATCTTCTTCATAGATGGTGTGTTGGATGAAGATGAGCTCGAAAACGGAGAGCTAAGTGAGGAATTCCAAACGCTACCAAATGGAGACGTGGCGGACAtg
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
3323Start:
290008End:
293330Strand:
+>Scaffold12302_LTR_12
CTATTGAAACCGAGGAAGAGCATGAGATTGAAGAAGTTATTAAGGAAAAGCTGGGCATGGATGGAGAGCCAAATACTCGTGGAAGGAGCCAGGTGACACTCGACGTACGTAATTATTAGCCTAAGATTCCTTTTCCGGGAAGGATCAAAGGGAGAATAGGGGTGAGAATGAGAAACGCATTTGAAGAACAAATAAAAGGTGTAATCATCACTATGCCGATACTAGAAGCTTTGGCGATGATTCCCAACACTAGCAAATTCCTCAAGGATCTCGTGACTAagaaaaagaaaGAGCTCACCGAGGTAGCATTCCTAACGCACAAGTGCAGCGCAGTTAGTCTCGACAAGAAAATTCCAAAGAAATTAGACGATCTGGGTAGCTTCACTCTCTCTTGCAATCTAGGTCCGATGATATTGGGAGATCTTTATGTGACCTTGGAGTTAGTGTgaaccttatgcCTCTATCCATTGCACAAAAGTTGTGATTTACAAAATTCAAGGAATATAGGATGTTAGTCGTTCTGCCGATTGCTTGATTGGTGACTACCAAATTCCAACTGATTTTGTGGTACTCAAGATGGATCACGAGcccaaagatccactcatcctagggagaccattcctagcaaccgcgggagccatcatcgatgttaaaaacggaaagatcaaccttcacctaaACGATGAAGTCATGTAGTTTAGTATCGATGAGGTGATGAAGAAACCCAAAGAACGAGATCGTATTTTCTAAATTGACGATCTCGACTTGCTAGCTAATGGCATATTAGATGAGGTTGAAcctaacgacgAGGACCTAAGTGAAGAATTCCAAACACTACAGAATGGAGACATGGTGGACATGATACCTCGAGAGATGGCTTATGTGAGTCTAACCGAGGGTGAAGAAGAAGAGGAAGCCACGCTAAAAGCAGGCGATGGTGAGACTTGCGACGAAGACGATTGGAGCGAGCTcaaagcaccaAAGGTGGAGCTGAAACCACTACCGAAAGGGCTAAGGTACGCGTTTCTCGGTCCTAATTCAACATATCcagtcataataAGTGATGAACTAAATGAAGATGAAACCTCGATGCTACTTAGTGAATTAAAAAAAATATAGGAAAGCCATAGGATAATCTTTAGATGATATCAAGGGAATATCCCcatccttatgcATGCATAGAATACATCTAGAAGATGAATTTAAAAATTTCATTGAACCGCAAAGACGTTTAAATCCAAATTTACGAGATGTAGTGCGAAAAAAAATTCTTAAACTTCTAGATGCGGGTGTTATTTATCCTATTTTCGATAGTAATTGGGTCTCACTTGTTCATGTTGTACCTAAAAAGGGTTGTATCACTGTGGTAAAAAATGAAaatgacgaatTAATTCCTACTAGAACTATCACGTGACATAGGATGTGTATTGATTTTAGGAAATTAATTGCTGCCATTAGAAAAGATCATTTTCCTCTTCCATTTATTGATCAAATGTTAGAATGACTAGCTAATCATTCTCACTATTGGTTTTTAGATGTGTATTCGAGATTTTTTCAAACCCCGATACACCCGCAAGATCAAGAAAAACGATATTTACATGTTCTTACGGTACATTTGCCTATCGAAGAATGCCGTTTGGGCTATGTAATGCACCTGCAACCTTTCAAAGGTGTATGATGTCGATATTTTTagatttaattgaatcagtagttaaggtgtttatggatgatttctctgtgtatggttcttcgtttggtggttgtttgtctaatttgtgcaaggtactaaaacgttgtgaagagacgaacctcgtacttaattgggagaagtgccatttcatggtgagagaaggaatcgttctcgggcataagatatcaaaaagagggattgaagtcgacaaggccaagatcgatgtgatgacaagtctagggcctccaaaaatggtgaaagacatacgaagtttccttggtcatgctaatttttatcgaagattcatcaaagatttttctaagatagcaagaccactcaccagcctgcTATGCAAGGATGTCGAGTTCAACTTCGATGACGCATGTTCCGAGGCATTCAGATCAATCAAGAAGGAGCTAGtgagtgcaccgATAGTACAACCGCCAGATTGAGAAGAATTGCCGTTCGAGATTATGTGGGACGCTAGCGATTATGCTGTGGGAGCTGTTCTTGGACAACGTAAAgataagaagcTGAATGTCATCTACTATGCGAGTAGGACACTAGATGAAACTTAGATGAAGTATGCCACCATTGAGAAGGAGCTTCTAGCGATCATATTTGCTTTTGAGAAATTTAGATAATATTTAGTCGGCTCAAAAGTCATAGTTCACACGGATCATGCAGCGTTCTGGTATTTACTAGCTACGAAGGATGCAAAACCAAGGCTAATTCGCTGGATACTACTCCTTCAAGAGTTCGAtttggagataaAAGATAAGAGAGGAATAGAGAACGGAGTAAGTGATCACCTTTCTCGAATGAGAATCACTGACAAGATTCCTATCGACGATTCACTACCGAAGGAGCAAGTCTATGCTATTAGAGTGCTTGTCGGTGAGCACAACCTCAACTAGTAGCTGAATAGCATTGATGCCATCAAAGAAAAATCACCATGGTACACTGACATCGTCAACTATCTCGCTTGTGGAGAGAAACCACCTAATCTTGTCGGATATCATAAGAAAAAAATTTTCAAGGAGATAAACCGGTATTATTGGGATGATCTGAAACTCTACACGCTGTGTAAGGATAAAATATATAGAAGatgtgttccgGAGCATGAGGTTCACAGGATTTTGACGGGATGCCAAGGATCAACATACGGAGGACATTTCGCTACATTCAAAACGGTGGCtaaagttttacAAGCTGGATTTTGGTGGCCGACTTTGTTTAGAGACGCTCATCGATTCATCCTAGCTTGCGATGCATGTCAAAGAGGAGGAAACATAAGTCAAAGGAACGAGACGCCTCAAAACCCGATAATGGAGGTAGAAgtctttgacgtGTGGGGCATCGATTTCATGGGACCTTTCTCAAGTTTCATGGTAACAACTACATCTTAGTGGTGATTGATTATGTATCTAAATGGGTAGAAGCTGTGGCGTGCCCAACAAACGATGTGAAGGTAGTTCTGAAACTTTTTAAAAGCATCATTTTCCAGCGTTTCGGAGTTCCGTGAGTGGTGATTAATGATGGAGGAACACACTTCATTAACAAAAATTTCGACAAACTCCTTAAACACAAGGAGTTTAGACACAAGGTGGCAACAACATATCATCCTTAAACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1673Start:
353082End:
354754Strand:
->Scaffold12302_LTR_13
TGTCCGTTCACCTTGAATCTCTCTCCACTGTTGCCCCATAGATCTATAGCTATGTAAGGAATTATAGACTTTATCTTGAACGATCTAGACCAACGAGATCGAAGCTTTCCTGGAAAGAGCTTCAAACGAGAGTTGAATAGtaaaacttgaTCGTTTTCCCGGAACTCTCTTCGAAATATTCTCTTGTCATGGAATGTCTTAGTCTTCTGCTTGTATATACAGGCATTCTCATAAGCGTCTTGGTGAATCTCGTCTAGCTCGTTGAGTTGCATTAGGCACTTCTCCGCAGCGTTTTTTATTTCATTGTTCAGCATCTTCACAGCCCACATAGGTTTGTATTCTAGCTCAACCGGCAAATGACAAGACTTTACATAGAGAAGGTTGAAAGGAGTTGTACCAATGGGAGTCTTGAAAGCTGTTcgataagcccacaaagcatcgTCTAGCTTAAGCGACCAGTCTTTTCGTGAAATATTCACCGTCTTCTCCAATATTGCTGTGATTTCTTGGTTTAAAACCTCCACTTGTCCGCTTGTTTGAGGATGATATGATATTGCAACGTTGTGTCTAACGCCATGCTTCcttaggagtttATCGAAAGTTTTGTTAATGAAATGCGTTCCTCCGTCGCTAATCACCACTCGCGGAACTCTGAAACGCGAAAAATGATGCTCTTAAAAagtttcagaacTACCTTCGCATCGTTTGTTGAACATGCCACAGCTTCTACCCATTTAGATAATCAACCGCCACTAAGATGTAGTTGTACCATGTGAGTTCGGAAAAAGGTCCCATGAAATAGATGCCCCACACGTCAAAGACTTCTACCTCCATTATCGGTTTTTGAAGCATCACGTTCCTTCGACTTATGTTTCCTCTTCTTTGACATGCATCACAAGctaggatgaaTCGATGAGCATCTCTAAATAAAGTTGGCCACCAAAATCCAGCTTGCAAAACTTTAGCTACCGTTTTGAATGTAGCGGAATGTCCTCCATAGATCCATGGCATCCCGTCAAAATCCCATGCACTTCATTTTCAGGAACGCACCTTCTATAGATTTTATCCTTACATAGTGTGTAGAGGTTTGGGTCGTCCCAATAGTATCGGTTGATCTCTTCTTATGATATCCGACGAGATCAGGCGGTTTCTCTCCACAAGCGAGAtagttgacgatgtcagcataccatggtgatttatccttgatgacgttgatgctcTTCAGTTCCTTGTTGAGGTAGTGCTCGCCAATAAGTACTCTAATAGTGTAAACTTGCTCTTCTGGTGGTGAATCATCAATAGGTATCTCGTCCTCGATCCTCATCCAAGAAAAATGATCAGCCACTCCGTTTTCTATTCCtctcttgtcttTTATCTCCAAATCGAACTCTTGAAGAAATAGTATCCATCGGAGTAGCCTCGGCTACGCATCTTTCTTCGCACCTTAATGCCGCATGGTCCGTGTGAACTATGACTATTGACGGGACTACTCAAAAGCAAAGATGATCGCTAGAAACTCTTTCTCCGTAGTAGCATAATTCATTTGCGCTTCGTCTAGTGTTCTACTCGCGTAATAGATGACATTCAGCTTCTTATCcttgcgttgtcctagcacagctcctaCCGCATAATCACTAGCATCACACATAATCTCAAACGGCAATTCCCAATCC
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
578Start:
358305End:
358882Strand:
->Scaffold12302_LTR_14
CCCCACACATCAAAGACTTCTACCTCCATTATCGGTTTTTGAGGCATCTCGTTCCTTCGACTTATGTTTCCTCTTCTTTGACATGCGTCACAAGCTTGGATGAATCGATGAGCATCTCTAAATaaagttggccaCCAAAATCCAGCTTGTAAAACTTTAGTTACCGTTTTGAATGTAGCGAAATGTCCTCCATACGTAGATCCATGGCATCTCGTCAAAATCCCATGTTCTTCATTTTCGGGAACGCACCTTCTATagattttatccTTACATAATGTGTAGAGGTTTGGGTTGTCCCAATAGTATCGGTTGATCTCTTTGATAAACTTCTTCTTATGATATCCGACGAGGTGAGGTGGTTTCTCTCCATAAGCAAGATAGTGACGATGTCAGCGTACCATGGTGATTTATCCTTGATTGCGTTGATGCTCTTCAGTTACTTGTTGAGGTAGTGCTTACCAATAAGTACTCTAATAGCGTAGACTTGCTCTTCTGGTAGTGAATCgtcaataggtaTCTCGTCCTCGATCCTCATCCGAGAAAGATGATCAGCCACTCTGTTTTCTATTCCTTTCTTG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1001Start:
358894End:
359894Strand:
->Scaffold12302_LTR_15
TCATTTGCGCTTCGTCTAGTGTTCTACTCGCGTAATAGATGACATTTGGCTTCTTATCCTTGCGTTGTCCTAGCACAGCTCCTACCACATAGTCACTAGCATCACACATAATCTCAAACGGCAATTCCCAATCCGGcggttgtactATCGGTGCACTCACTAGCTCCTTCTTGATTGATCGGAATGCCTCAAAACATGCATCATCGAAGTTGAACTTAACATCTTTGAATAGCAGGCTGGTGAGTGGTCTTGCTATCTTAGAAAAATCTTTGATGAATcttcaataaaaatTAGCATGACCAAGGAAACTTCGTATGTCTTTCACCGTTTTTGGAGGCCCTTGACTTGTTATCACATCGATCTTGGCCATGTCGAGTTCAATCCCTCTTTCCGATATCTTATGTCCAAGAAGGATTCCTTCTCTCACCATGAAATGACACTTCTCCCAATTAAGTACGAGGTttgtctcttcgcatcgttcaagtaccttgcacaaattagacaaacaaccaccaaacgaagaaccATACACAGAGAAATCATCCATAAACACCTCAACTACTGATTCAATTAGATGTTAAATATCGACATCATACACCTTTGAAAGGTTGCAGGTGCATTGCATAGTCCAAACGACATTTTTCGATAAGCAAAGGTACCTTAAGGACATGTAAATGTCGTTTTTTCTTGATCTTACGGGTGTATCAGAATTTGAAAGAATCCCGAATACCCATCTAAAAAACAATAGTCAGAGTGATTTGCTAATCGTTATAACATCTGATCAATAAACAGAAGAGGAaaatgatctttTCTAGTGGCAGCATTTAATTTCCTAAAATCAATACATATCCTATGTCCCGTGATAGTTCTAAAAGGAATTAATTCGTCATTTTCATTTTTTAccacagtgatACCACCCTTTTTAGGAACTACATGAACAGATGATACCCAATTACTATCAGATATACGATAAATAATTCCTGCATCTAGAAGTTTAAGAT
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1189Start:
359897End:
361085Strand:
->Scaffold12302_LTR_16
AAATGGTTTCAACTTCACTTTCGACACCTTGATTTCGCTCCAATCGCCTTCATCGCAAGTCTTTCCTTTGCTTGCTTCCTCTGTGGCTTCTTTTTCTTTGTCACCTTCAGTTAGACTCGCGTAGGCCATCTCACGAGGTATCATGTCCGCCACGTCTCCATTTTGTAGCATTTGGAACTCTTCACTTAGCTCCTCGTTTTCGAGCTCAACTTCGTCCAacacaccatcAGCCAACAAGTCGAGATCGTCTATGTAGAAGATGCGGTCTCGTTCTTCAGGTTTTTTCATCACTTCGTCAATACTAAACTGCATAACTTCGTTGTTTAAATGAAGATAGATTTTTCCGTTTTTGACATCGATGATGGCTCTCGCGGTTGCTAGGAATGGTCTCCCTAGGATGAGTGGATCATTGGGCTCGTGATCCATCTTGAGtaccacaaagTCGGTTGGAATTTGGTAGTCACCTCTCATCACCGGAATGTCTTCGAGTAATCCCACCGGCgtttttatcgAGCGATCGGCGAGAACGAGTGACATCTAACATTCCTTGAATTTTGTAAATCCCAACTTTTGTGTAATGGATAAAGGCATGAGGTACACACTAGCTCCAAGATCACATAAAGATCTCCCaaatgttatcgGACCTATATTGCAAGAGAGAGTGAAGCTACCCGGATCGTCTAATTTCTTTGGAATTTTCTTGTCAAGAATAACAGCGCTACACTTGTGTGTTAGGAATGCTACCTCGGTGAGCTCCTTCTTCTTCTTAGTCACGAGATCTTTGAGGAACTAGCTGGCGTTGGGAATCATCGTCAAAGCTTCTAGTATCAGCATAGTAATGATTACACCTTTCATTTGTTGTTCAAATGCAGCCTAGGAATCTTAGGCTGATAATTGTGTACGGAGTGTCACCTGACTCCTTCCACGAGTATTAGGCTCTTTATCCTTACCGGGTTTCTCCTTGATTACTTCCTCAATCTCGGGTTCCTCTTCAATTGTGATGTGATCTTCTTTCTCGACGATAGGATCTTCTTTTTCAACGGTAGGGCCTTCTTTCGCGATGATGGTCTCGTCGTTCTTTTTGTTGATCTGTTGCTTAGGTGGGataggtctaagCTCCTTTCCACTTTTCAAGGTTATCGCATTGATTGTTGGTGTAACCTCCAATGTCTTGGCTTATAGTTTTTGG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
688Start:
361562End:
362249Strand:
->Scaffold12302_LTR_17
GTGTTGTTCTTCGCGATGTtttgacggggcGAAATGTTTCGCCGATTTCAGAAACCCATCTAATTTTTCGTGTAGCGCCTCCATGGTCAGCTTCTCCTAGGCTTCATGTATGTCGGCGTGTTCGTTTATTCGATCGTAATCTCCTCCGTATTTCGCATCACTCTCGGCTAGATTCTCCACTAACTTCCTTCCACGCTGCGCGTCTTGCCCCAAGAAAGCTCTGCAGCTTCCTACATCGAGTAACGTACGATACTTAGGAGTCACTCCCCTGTAAAATATGctcagcaaggACTCATCGCCAAATCCATGATGAGGGCATTGTCTTGTGTATTCTACAATCCTCTCCCACGCTTCTCCAAATCTCTCAATGCCTCGTTGTGCGAAGTTTGATATCTTGTTTCTCCAATAAGTTGTCCTAGCGTTCGAGTAGAACTTTTTCAGGAACGCTTTCCggcattgactcCACGTTGTAATAGTCTCTGATGAGATGTTCTTCTCCCACTGATGTACTTTACCACCAAGTGAGAACGGGAATAGACAAAGTTTTAGTGCATCTTCAGAGAGGCCGTTTATGTGTACCATCCCGCATAACTTGTTGAAGTGATCCAGATGATCCATAGAGTTCTCTGTTGATAGGCTTTGGAACTTTTCTCCTTGGATCATGTTAATCAAGTCGACCTTGATTGCA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
3266Start:
376894End:
380159Strand:
->Scaffold12302_LTR_18
CTGTTCACCGTGAAGCTTTCCCCATTATCCCCCCATAATTCTATAGCTCCATAAGGTGTCACCGCCTTTATCTTGAACGGTCCGGACCATCGAGAACGAAGTTTGCCTAGAAAAAACTTTAATCGGGAGTTGTAAAGTAGGACTTGATCATTTACCTTAAACTCCTATTGAAGTATTCGCTTGTCATGGAATGCttttgtcctcTCTTTGTATATCCGGGCATTCTCATATGCATCCAGGCGAATCTCTTCTAGTTCGTTTAATTGCATGAGGTACCTTTCAGCAGCGGTTTTGATGTCGTAGTtcagcatcttgACAGCCCACATAGCTTTGTACTCGAGCCCCACCGGTAGGTGACATGATTTTCCATACAGAAGATTGAAAggagtcgtacCTATAGGCGTTTTGAAAGCTGTCCAATAGGCCCACAAAGCATCGTCTAGCTTGAGTGATCAATCCTTTCGTGAAATGTTCACCATCTTCTCTAAGATTGCTTTGATTTCACGgttagaaactTCCACTTGTCCACTTGTTTGAGGATGATTTGGTGTCGCCACTTTATGTCTGACACCATGCTTTCATAAGAGCTTATTGAAAGTTCTGTTGATGAAGTGTATCCCTCCGTAGCTGATCACCACTCGCGGGATACAGAATCATGGACAGATGATGTGGTTAAAAGGTTTAGGAACTACCTTTGTGTCGTTTGTTGGACTTGCCATAGCTTCTACCCATTTAGACACGTAGTCCACtgctactaggATGTAGTTGTTTCCATGTGAGTTTGGGAAATGTCCCATAAAGTCGATTCCCCATACATCGAAGACTTCTACTTCCATTATCAGATTTTGAGGCATCTCATTTCTACGGCTTATATTTCCTCTTCTTTGACATGCATCACAAGCTAGGATGAATCGATGAGCATCtttgaacaaagtcggacaccaaaaTCTAGCTTGCAAAACTTTAGCCACCGTCTTGAATGTAGCGAAATGTCCTCGGTATGTTGATCCATGGCATCCCGTCAAGATCCTGCCAACTTCATGCTGAGAAACACATCTTCTGTATATTTTATCCTTacatagcgtgTAGAGGTTTGGATCATCCCAATAATACAGATTGATCTCCTTGAAAATCTTTTTCTTGTGATATCCGACGAAATCAGGTGGTTTTTCTCCACAAGCGAGATAATTGACGATGTCGGcgtaccatggtGACTTGTCCTTGATGGCGTTGATGCTTTTCAGCTCCTTATTGAGCTTGTGTTCACCGATAAGTACTCTAATGGCATAGAGTTGTTCCTCCGGTAGTGAATCATCGATAGGGATCTCGTCAGTGAttctcattcgaGAAAGGTGATCAGCTACTCCGTTCTCTATTCCTCTCTTATCTTTCATCTCCAAATCGAACTCTTGAAGGAGTAGTATCCAGTGGATTAGCCTTGGTTTTGCGTCCTTCTTAGAGAGTAGATACCTTAGTGATGCATGAGCCGTGTGTACAATGACTTTAGAAccgactaagtaTTGGCGGAACTTCTCAAAAGCAATGACGATCGCTAGAAGCTCTTTCTCCGTAGTGGCATAATTCATTTGCgcttcgtctagCGTCCTACTTGCATAATAGATGACATTCAGCTTTCCGTCTTTTCGTTGCCCAAGCACAGCTCCTACGGCATAGTCACTAGCATCACACAtaatctcgaacggtaacccccaatctggcggttgtactatcggtgcactaactagctccttcttgattgatcggAATGCTTCAAAACATGCGTCATCAAAGTTGAACTCGACATCCTTGCATAGCAGGTTGGTGGTTGGTCTTGCTATCTTAGAGAAATCCTTGATAAATCTTCAATAAAAATTAGCATGACCAAGAAAACATCGTATGTCTTTCACCGTTTTTGGAGGCCCTAAACTTGTCATTACATCGATCTTGGCCTTGTCGACTTCAATTCCTCTTTCTGGTATCTTATGCCCGAGAACGATTTCTTCTCTCACAATGAAATGACACTTCTCCCAATTAAGTACTAGGTTTGTCTCTTCGCACCGttcaagtaccttgcacaaaTTAGACAAACAACCACCAAACAAAGAACCATACACAGAGAAATCATCCATGAATACCTCAACTACTCATTCAATCAATTTTGTAAATATTGACATCATGCACCGTTGAAAAGTCGTAGGTGCATTACACAACCCAAACGGCATTCTTCGGTAAGCGAAGGTACCATAAGGACATGTAAATGTcgttttttctTGATCTTGAGGATGTATCGGGATTTGAAAGAATCCCGAGTACCATCCTAAAAAGAAATAGTGAGAATGATTTGCCAATCTCTCTAACATTTGATCAATAAACAGAAGAAGAAAATGATCTTTTCTAGTGGAACATTAAATTTTCTGAAGTCAATACACATCCTATGTCCTGTGATAGTTCTAGTTGGAATTAATTTGTCATTTTCATTTTTTACCACAGTGATACCACCCTTTTTAGGCACAACATGAACAGGTGAGACCcaagtactatcTGATATAGGATAAATAATACCTGCATCTAGAAGTACGTAAATTTAGATTTAATCGCCTTTGAGGTTCAATTGAATTCTTAGATTCATCTTTTAAATGTATTCTATGCATGCATAGGGATGGGGATATGCCCTTGATATCATCTAGAGATCCTATTGCTTTTTTATATTTTCTCAAATCATCAAGTAAAAGAGAAATTTCATCATCATTAAGCTCATCACTtactatgacaGGATATGTTGAATTAGGACCGAGAAATACGTACCTTAGCCCTTTTGAAAGTGGTTTCAACTCCACCTTCGGTGCCTTGAGATCGCTACAATCATCTTCATTTCAAGTCTTACCTTCGCTTGCTTCCACCGTGGCTTCTTCTTCTTCGCCACCTTCGATTAGACTTGCGTATGCCATCTCACAAGGTAGCATGTCCGCCACGTCTCCATTTTGTAGCGTTTGGAATTCTTcacttagttcTTCGTTTTTGAGCTCAACTTCGTCCAACACACCATCAGTCAACAAGTCGAGATCGTCTACGTAGAAGATGCGGTCTCGTTTTTCGGTTTTCTTCATCACTTCGTCAATACTAAACTGCATAACTTCATCGTTATGGTGAAGGTTAATCTTCCCATTCTTTACATCGATAATGGCCCCCGTAGTAGCTAGGAATGACCTTCCTAAGATAAGTGGATCCTTGGGTTCGTGATCCATCTTGAGTACTACAAAGTCTGT
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
798Start:
392209End:
393006Strand:
->Scaffold12302_LTR_19
TCTGTCGGTATTTGGTATTCACCAATCATTACTGGAATGTCTTCAAGCAATCACACTGACATCTTACACTCCTTGAACCGAGTAAGTCCCAACTTTTTCACAATGGATAGAGGCATTATATTCACACTAACTCCAAGATCGCATGAAGATCTACCGAATGTTATGTGACCGAGGGTGCAAGAGAGAGTGAAACTGCCTGGGTcatctagcttCCTTGGAATCTTCTTGTCGAGGATGATGGTACTGCACTCGTGTGTCAAGAAAGCCACTTCGGTTAGTTCCTTTTTCTTCTTAGTTACAAGATCCTTGAGGAACTTGCTAGCGTTTGGAATCATTGTCAGGGCTTCTAGTATTGGCATAGTGATGATCACACCTTTCATTTGTTTTTCAAATGCATTCCTTATTCTCTCCGCTATTCTTCCCTTAATTTTTCCCGGAAAACGAACTTTAGGTTGATATTTTGGGAGATCATGTGTCACTAGTTTCCTTACGCGAGTCTCAGGTCCCTTTCTGGGAATTTCCGTAGTACGAATGTCAGGCTCCCTATCTTTGTCTGGCTTCTCCATAATGACCTCCTCGATTTCTAGTTCCATCTCGAATATCTGGGGATTCTTTTTCTCGACTATTGGTTCTTCCCTCTCGATCATGATAGGGTCGTCTTCTTTTTCGATGTAAGCTCCTTCGCTTTTCTTGTTTATTGGCTGCTTAGGTGGAATcggtctgagctCCTTTCCACTCTTCAAGGTTATTGCTTTGACTGACGGAGACTATTTTTGTGTTCGTGTTTCTATATTTTGG
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
2582Start:
396486End:
399067Strand:
->Scaffold12302_LTR_20
TAGTGGCGTAATTCATTTGCGCTTCGTCTAGcgtcctacttgCATAATAGATGACATTCAGCTTTATGTCCTTGCGTTGTCCAAGCACAGCTCCTACGGcatagtcactAGCATCACACATAATCTCGAATGGTAACTCCCAATCCGGCGGTTGTACTATCGGTGCACTAACTAGCTCTTTCTTGATTGATCGGAATGCTTTGAAACATGCTTCATCGAAGTTGAACTCGACATCCTTGCATAGCAGGCTGGTGAGTGGTCTCGCTATCTTAGAAAAAGCTTTGATGTATATTCGATAAAAATTAGCATGACCAAGGAAACTTCGTATGTCTTTCACCTTTTTGGAGGCCCTAGACTTGTCATCACATCGAACTTGGCCTTGTCGACCTCAATCCCTCTTTCCGATATCTTATGTCCCAGAACGATTCCTTCTCTCACCATGAAATGACACTTCtcccaattaaGTACTAGGTTTGTCTCTTCGCACCGTTCAAGCACCTTGCAAAAATTAGACAAACAGCCACCAAACGAAGAACCATACACAGAGAAATCATCCATAAACACCTCAACtactgattcaattaagtctgaaaatatTGACATCATGCACCATTGAAAAGTTGCAGGTGCATTACATAATCCAAACGGCATTCTTCGTTAAGCAAAGGTACCATAAGGACATGTAAATGTCGTATTTTCTTGATCTTGAGGATGTATTGGGATTTAAAAGAAACCCGAGTACCCATCTAAGGGATTTGAAAGAAACCAGAGTACCTATCTAAGAAGCAATAGTGAGAGTGATTTGCTAATCATTCTAACATTTGATCAATAAACGGAAGAAGAAAATGATATTTTCTAGTGGGAGCATTTAATTTTCTAAAATCGCTACACATTCTATGTCCTGTAATAGTTCTAGTACGGATTAATTCATCATTTTCATTTTTTATTAGAGTTATTCCACCCTTTTTAGGgactacatgaaCAGGTGAAACCCATGTACTATCTGAAATAGGATAAATAACACCTGCATCTAGAAGTTTAATAATTTCTTTTCGTACTACATCTCGTAAATTTGGATTTAAATGCCTCTGAGGTTCAATAGAATTTTTAGATTCATCTTCTAAATGTATCCTATGCATGCAGAAGGAGGGGGATATTCCCTTTATATCATCTAGAGAATATCTTATAGCCTTCCTATATTTTTTTAATTCATTTAGTAACATTGTGGTTTCAGCATCATTAAGCTCATCACTAATTATGACAGGATATGTTGAATTCTGTCCACGAAATATGTACCTTAGCCCTTTTGGAAGTGGTTTTAGCTCCACTTTTAGTGCCTTAAGTTCGCTCCAATCGTCTTCGTCTCAAGTCTCAACGCTGCTTCCCTGTATTTTGGCTTCTTCTTCTTCGTCACTTTCGGTTAGATTTGCATACGCCATCTCACGAGGAATCACGTCAGTCATATCTTCAATCCGTACTGTTTGGAATTCTTCACTTAATTCTTCGTGTTTGAGCTCAGCTTCATCCCATTTTCCATTACCTAGCAAATCGAGATCATCTATGTAGAAAATACGGTCTCATTTTTTGGGTTTCTTCATCACCTCATCgatactaaactGCATCACTTCATCGTTTAGGTGAAGGTTGATCTTCCCATTTTTAACATCGATGATGGCCCCGCGGTAGCTAGGAATGGCCTTCCTAGGATAAGTGGAtccttgggctCGTGATCCATCTTGAGTACTACAAAGTCTGTCGGTATTTGGTTTTCACCAATCATCACTGGAATGTCTTCAAGTAATCCCACCAGCGTTTTTATTGAGCGATCAGCAAGAACTAGTGATATCTTACACTCCTTGAATCGAGTAAGTCCCAATTTCTGTGCAATGGATAGTGGCATTAGATTCACACTAGCTCCAAGATGACATAAAGATCTACCGAATGTTATGTGACCGAGAGTGCAAGAGAAAGTGAAACTGCCTGGGTCATCtagctttcttgGGATCTTCTTGTCGAGGATGACGATACTGCACTCATGTGTCAAGAACACCACCTTAGTTAGCTACTTTTTCTTCTTACTCACGAGATCCTTGAGGAACTTGTTAGCGTTTGGAATCATCGTCAAGGTTTCTTGTATCAGCATAGTGATGATCACACTTTTCATTTGTTCTTCAAATACATTCCTCATTCTTTCCGCTATTCTTCCCTTGATTCTTCCCAAAAAAGGGATTTTAGGTTGATACTTTGGGAGAtcgtgtgtcacTTGTTTCCTTATGCGAGTCTCGGGTTCCTTTATGTGAATTTCCGTAGTACGAATGTCGGGCTCCCTATCTTTCTCTGACTTCTCCGTGATGACTTCCTCGACTTCTGGTTCCTCCTCGAATATCTTGGGGTTTTCCTTCTCGACTATTGGATTTTCCTTCTCGATCATGATAGGGCCGTCTTGTTTCTCGATGTTAGCCCCTTCGCTTTTCTTGCTTACTGGTTGCTTAGGTGGAATCGTTCTGAGCTCCTTTCTACTCTTCAAGGTTATAACTTTGACTGACGGTGACTCTTCCTTTGTTTGTGTTTCTATATTTTGG