ID Class Order Superfamily Length Start End Strand View
Scaffold124_LTR-Ngaro_1 RetrotransposonsLTRLTR-Ngaro83661739661821+
Scaffold12659_LTR-Ngaro_2 RetrotransposonsLTRLTR-Ngaro31121662852166595+
Scaffold12722_LTR-Ngaro_3 RetrotransposonsLTRLTR-Ngaro174406871407044+
Scaffold15697_LTR-Ngaro_4 RetrotransposonsLTRLTR-Ngaro237260651260887+
Scaffold16115_LTR-Ngaro_5 RetrotransposonsLTRLTR-Ngaro92290381-
Scaffold19046_LTR-Ngaro_6 RetrotransposonsLTRLTR-Ngaro113258769258881-
Scaffold19424_LTR-Ngaro_7 RetrotransposonsLTRLTR-Ngaro8459148975914980+
Scaffold23794_LTR-Ngaro_8 RetrotransposonsLTRLTR-Ngaro9542805574280651-
Scaffold23794_LTR-Ngaro_9 RetrotransposonsLTRLTR-Ngaro11645604694560584-
Scaffold24513_LTR-Ngaro_10 RetrotransposonsLTRLTR-Ngaro147466308466454-
Scaffold24513_LTR-Ngaro_11 RetrotransposonsLTRLTR-Ngaro11011060021106111-
Scaffold25219_LTR-Ngaro_12 RetrotransposonsLTRLTR-Ngaro18116128531613033+
Scaffold25463_LTR-Ngaro_13 RetrotransposonsLTRLTR-Ngaro10812033281203435+
Scaffold26527_LTR-Ngaro_14 RetrotransposonsLTRLTR-Ngaro150867551867700+
Scaffold26527_LTR-Ngaro_15 RetrotransposonsLTRLTR-Ngaro252867743867994+
Scaffold26527_LTR-Ngaro_16 RetrotransposonsLTRLTR-Ngaro11226378682637979+
Scaffold597_LTR-Ngaro_17 RetrotransposonsLTRLTR-Ngaro20211145851114786+
Scaffold7128_LTR-Ngaro_18 RetrotransposonsLTRLTR-Ngaro206339300339505+
Scaffold7128_LTR-Ngaro_19 RetrotransposonsLTRLTR-Ngaro17815819921582169-
Scaffold7200_LTR-Ngaro_20 RetrotransposonsLTRLTR-Ngaro164323594323757-

< 1 2 > Total 2


Boechera stricta (v1.2)

ID:

Scaffold124_LTR-Ngaro_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

83

Start:

661739  

End:

661821

Strand:

+

>Scaffold124_LTR-Ngaro_1

GTAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGGCGAAGGTCGCGGGTTCGAGTCCCGGCGGGACCAAACTGGTATCTTTAT

Boechera stricta (v1.2)

ID:

Scaffold12659_LTR-Ngaro_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

311

Start:

2166285  

End:

2166595

Strand:

+

>Scaffold12659_LTR-Ngaro_2

CAGCAGCAGCAGCAACAACAGCTCCAACAACAGCACCAACAACAACAGCAGATCCAGCAGCAGCAGCAACAACAACACCACCAACAGCAACAGATGCCACAACTCCAGCAACAACAACAACAGCACCAGCAGCAacagatgccacaactcCAGCAACAACAACAACAGCACCAGCAGCAACAGATGCCACAACTCCAGCAGCAACAGCAGCATCAATTGTCGCAGCTCCAACATCATCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCATCAGTTGACACAGCTTCAACACCATCATCAGCAGCAACA

Boechera stricta (v1.2)

ID:

Scaffold12722_LTR-Ngaro_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

174

Start:

406871  

End:

407044

Strand:

+

>Scaffold12722_LTR-Ngaro_3

TGAATGTGTATGCACATGCATGAATGTATGCATGTATGCTTATGCATGTATGTGCTTATGCATGAATGTATGTATGTGCTTATGCATGAATGTATGCATGTATATGCTTATGCATGTGTATGCACGTGTATGTAATATATGTATGTCTGCATGCATGTGACGTAGTACATACAT

Boechera stricta (v1.2)

ID:

Scaffold15697_LTR-Ngaro_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

237

Start:

260651  

End:

260887

Strand:

+

>Scaffold15697_LTR-Ngaro_4

CAGCAGCAACAGAAGATTCAGTTGCAACAGCAGCAACAGaagattcagttGCAACAGCAGCAACAGAAGATTCAGTTGCAACAGCAGCAGCAGAAGCTTCAGTTGCAACAGCAGCAGAAGATGCAGTTGCAACAGCATCAGCTGGAACAAGAGCATCAGTTACATCAGAAGCTCTTACAAGAGCAACAACAGTCTCATGCTCGACAGTTACATTTTCAACAGATTCTACAAGGACAG

Boechera stricta (v1.2)

ID:

Scaffold16115_LTR-Ngaro_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

92

Start:

290  

End:

381

Strand:

-

>Scaffold16115_LTR-Ngaro_5

CTGTTGTTGCTGCTGCTGGTGCTGTTGTCGTTGTTGCTGTTGTTGCTGCTGCTGAAGTGACAATAGATAGTTGTTCTGTTTGTATTCTAGCT

Boechera stricta (v1.2)

ID:

Scaffold19046_LTR-Ngaro_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

113

Start:

258769  

End:

258881

Strand:

-

>Scaffold19046_LTR-Ngaro_6

TGTTGCTGCTGTTTCTGCAAATGCTGCATCAGAAATAGCTGTTGTTGACGCTGTTGCAGTTGTTGTTGTTGTTGCATTTGAAGTAAGAGTTGCTGTTGTTGCAACTGCTGCTG

Boechera stricta (v1.2)

ID:

Scaffold19424_LTR-Ngaro_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

84

Start:

5914897  

End:

5914980

Strand:

+

>Scaffold19424_LTR-Ngaro_7

TGGGAATAACAAAGACAACAACAACAGTGGTACTAACAACAATGGCAATAACAACAATGGGAATAACAACAACAACAGAAACAA

Boechera stricta (v1.2)

ID:

Scaffold23794_LTR-Ngaro_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

95

Start:

4280557  

End:

4280651

Strand:

-

>Scaffold23794_LTR-Ngaro_8

GGGGAGTTTCACGTAACCATCATACATATATATACTTTTGCTTAATGTGTAAGTATACATTTATATATATATATATATATCTACATATATATAAA

Boechera stricta (v1.2)

ID:

Scaffold23794_LTR-Ngaro_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

116

Start:

4560469  

End:

4560584

Strand:

-

>Scaffold23794_LTR-Ngaro_9

CTATTATATATATATATATATATATTGGACGAAAATACCTATTATATATGTATATGTATATATAATATATGCTCATGTAAACAAAAACATATGCCAATTGTTCTAGGAGGAATTGT

Boechera stricta (v1.2)

ID:

Scaffold24513_LTR-Ngaro_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

147

Start:

466308  

End:

466454

Strand:

-

>Scaffold24513_LTR-Ngaro_10

TTTTGTTGTTCCTGCTGTTGAATCCGCTGCTGCATAAGCTGTTGCATCTGTTGCTGTTGAAACTGGTACTGCTGTTGTTGTTGCTGCTGCTGCTGTTGCTGCTGCTTCTGTGAATGAATCTGAAGTTGCTGGAACTGTTTTGCGGCT

Boechera stricta (v1.2)

ID:

Scaffold24513_LTR-Ngaro_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

110

Start:

1106002  

End:

1106111

Strand:

-

>Scaffold24513_LTR-Ngaro_11

TTGATGTTTCTGTAGCTGCTGCTGCTGATGATGAAGATGGTGAGCTTGTAACCGTTCATGAAGCTGCTGTTGCTGCTGCTGCTGCTGCTGTAGCTGCTGTTGTTGTTTTT

Boechera stricta (v1.2)

ID:

Scaffold25219_LTR-Ngaro_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

181

Start:

1612853  

End:

1613033

Strand:

+

>Scaffold25219_LTR-Ngaro_12

CAGCCGCACAACAGTTCCAGCAGCTCCAGATCCAGTCACAAAAACAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACAACAACATCAGCAGCAGCAATTTCAGTTTCAGCAACAGCAACTGTATCACCTTCAGCAGCAGCAGCAGCAGCGGCTTCAACAACAGGAACAACAAAGCGG

Boechera stricta (v1.2)

ID:

Scaffold25463_LTR-Ngaro_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

108

Start:

1203328  

End:

1203435

Strand:

+

>Scaffold25463_LTR-Ngaro_13

TGTATATGTGTGTGTGTCAGTGTGTGTGTCAGTGTGTGTGTCAGTGTGTGTGTAAGTTCTTCCTACATTATACAAATATATAAGCAGGAATATAATATACGGAAGTAC

Boechera stricta (v1.2)

ID:

Scaffold26527_LTR-Ngaro_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

150

Start:

867551  

End:

867700

Strand:

+

>Scaffold26527_LTR-Ngaro_14

CAACAACAGCAGCTGCAGCAATTGCTGCACTCCTCTTTCAACCATCAGCAACAACAATCGCAGTCTCAACAACAGCAACAACAACAGTTGCTGCAGCAGCAACAACAGTTGCAGTCTCAACAACACTGCAATAACAATCAATCGCAGTCT

Boechera stricta (v1.2)

ID:

Scaffold26527_LTR-Ngaro_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

252

Start:

867743  

End:

867994

Strand:

+

>Scaffold26527_LTR-Ngaro_15

TTGCTACAGCAGCAACAACAACAACAATTACTGCAGCAACAGCATCAACAACCGTTACAGCAACAGACTCAGCAGCAGCCGCTAAGAACGCAGTCATTGCAATCTCACTCGCATCCACAGCCACAGCCACAAGGCCCACAACAGTTACAACAACATAAGTTGCAGCAACTTCAACTTCCTCAGAATCAGCTTTACAATGGTCAACAAGCAGCGCAGCAGCTTCAGGCGCAACAACATTTGCAACCACAGCTA

Boechera stricta (v1.2)

ID:

Scaffold26527_LTR-Ngaro_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

112

Start:

2637868  

End:

2637979

Strand:

+

>Scaffold26527_LTR-Ngaro_16

CAGCAGCAACAACAACAACAACTTCTCTATCAACACCAATTACAACAACAGCGACAACAACAAATGCTTCTATTGCAGCAATTGCAGAAACAGCAACAGCAACAAGCAGCAA

Boechera stricta (v1.2)

ID:

Scaffold597_LTR-Ngaro_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

202

Start:

1114585  

End:

1114786

Strand:

+

>Scaffold597_LTR-Ngaro_17

GTTATAATAAAAATAACAACAACAATAACGACGACGACAATAACAACAACAACGACTACAACAACGACAACGACGACAACAACGATAACAACGACAACAACGACAACGACGACAACAACGACAACGACAACGACGACGACGACAACAACGACGGCGACGACAACGACGATGACAACAATAATAATAACAATAATAATAATAA

Boechera stricta (v1.2)

ID:

Scaffold7128_LTR-Ngaro_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

206

Start:

339300  

End:

339505

Strand:

+

>Scaffold7128_LTR-Ngaro_18

CAGCAGCTATTCCTCCAACAACAACAGCTACAACAACAGCAACAACAACAGTTTCAACAGCAACAGCAACAACAACAACAACAACAGTTTCATCAGCCACAACAAGAGATGCAACAGTTTCAGCAATTCCAACAACAGCAACACTTCATTCAACAACAGCAATTCCAACAACAACAACAACAACGGTTGTTACAATCTCCTCCTCC

Boechera stricta (v1.2)

ID:

Scaffold7128_LTR-Ngaro_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

178

Start:

1581992  

End:

1582169

Strand:

-

>Scaffold7128_LTR-Ngaro_19

GCTGTTGTTGATTAATCTGCATTTGCTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGTAGTTGTTGCTGCATCTGTTGTATTTGTTGCTGTTGCTGGGAATGGTTCATCTGCGCCTGTCCTATTTGTGATTGTTGCTGCTGCTGATGTATTATCTGTGATAACTGCTGCTG

Boechera stricta (v1.2)

ID:

Scaffold7200_LTR-Ngaro_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Ngaro

Length:

164

Start:

323594  

End:

323757

Strand:

-

>Scaffold7200_LTR-Ngaro_20

TATTGTTATTGTTATTGTTATTGTTATTGTTGTTGTTATTGTTGTTGTTATTGTTGTTGTTGTTGTTATTGTTGTTGTTATTGTTGTTGTTATTGTTGTTGTTGTTATTGTTGTTGTTATTGttgttgttatTGTTGTTGTTATTGTTGTTGTTATTGTCGTTG