Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
346Start:
907669End:
908014Strand:
+>Scaffold10040_LTR-Cassandra_1
TGTAACACCCAATTTCTAGAAATATGGTGATGCACGAAAAGAGTTGATTTGCCTACCTATATCACCAAAGTCCATTTATCTTTTTCGTCAAACATCCTAATAGAACTCTAGAGTTAAGCGTGTTTGGACTGTAGCAATTTTAATATGGGTGACCTGTCGGGAAGTGATTTCCGATACTGTGTAAGTGAAGACAAAATACGAAAAAAAAATATTCTGGTGATTTGTAGGGTCGGTAAACAAGTCTGTTAAGCCTCCGGAAATAGCGAACCGGCTGTCGGACGAGGATGGTAACACAGGCCCAGAAAGGGCTTGGGGAACCACGAACAGTGGCGGTCGAGTCGTTACA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
99Start:
1424695End:
1424793Strand:
->Scaffold10040_LTR-Cassandra_2
TAACGCCCCAACCGTCCCCGCCCGTGGTCCCATGTCCACTCTGGTCCATGGGCCCCATGCTCGTCGGACGGTCGGTTCGTTGCTTCTCAAGACTTTAAA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
353Start:
1530829End:
1531181Strand:
->Scaffold10040_LTR-Cassandra_3
TATAACGCCCCCAACCGTCCCGCCAGTGGTCCCATGTCCACTCTAGTCCATGGGCCCCACGCTCGTCGGACGGCCGGTTCGTTGTTTCTCAAGGCTTTAAAGACTTGTTTACCGACCCTACAAATcaccacgtgatCTTTCCCCGTGTTTTGTCCTCACTCACACGGTACCAGAAATCACTTTCCGGTAGGTTACACATCCTGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCGGGATGGTCAACCGAAAAGAtaagtgcactttggtGATATAGGTAGCCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCAATTTCCAGGTGTCGGGGTGTTACA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
106Start:
1531183End:
1531288Strand:
->Scaffold10040_LTR-Cassandra_4
TCACCCCACTAACAGATCGCAACGTCCTCGTTGCGCACCAAGACCGTCACCCCGACAGCGTGAGCCCTCTTGACTACATGTTTGTCTGGATTCAGCTCTGATACCA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
354Start:
1531292End:
1531645Strand:
->Scaffold10040_LTR-Cassandra_5
TATAACGCCCCAACTGTCCCCGCCCGTGGTCCCATGTCCACTCTGATCCATGGGCCCCACGCTCGTCGGACGGCCGGTTCGTTGCTTCTCAAGGCTTTAAAGACTTGTTTACCGATCCTACAaatcaccacgtGATCTTTCCCCGTGTTTTGTCCTCACTCACATGGTACCAGAAATCACTTCCCGGTAGGTTACCCATCCTGAAATTGCTCCAGTTCAAGTACGCTTAACTCTGGAGTTCTCTCGGGATGGTCAACCGAAAAGATAAGTGCactttggtgatatcgGTAGCCAAATCAATTCTTTTAAGCTCTCCTCATGCACCACCAAATCTCCATATTCCGGGGTATTACA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Cassandra_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
367Start:
2437398End:
2437764Strand:
->Scaffold10040_LTR-Cassandra_6
TGTAACACTCCGATCACCATTATTCATGGGTTCCACTACCTATCTCGGTCCGTGGGCTCACTTTTGTCCGATGATTAGTGCGCTATTTCCAATACTTGAAAATTTTTATTTACCGACTCTACAAATTACCATGTGATCTTTTTTCATGTTTTGTCATCACTTACATGATACCAAGAATCACTTatcggtagaccTAGATCACCCATCTTGAAATTGTTTCAGCTTAAATACGCTTAACTCTGAAGTCTGATAAAATTAATGTTTGAATGAAAAGACAAGTGCACTTTGGTAAAATAGATAGTCAAATCAATTTTTAAAATTAAAGCCTCTCGACATGCACCACCATAGTTCTGAAATCGAGGTGTTA
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
255Start:
308279End:
308533Strand:
+>Scaffold10058_LTR-Cassandra_7
TTTAAAAGAATTGATTTGGCTACCAAAGTGCACTTATCTTTTCGGTTaaccatcccgAGAGAACTCCAGAGTTAAGCGTGCTTATGCTGAAGCAATTTAAGGATGAGTGACCTATCGGGAAGGATTTCCGGTACCATGTGAATGAGGACAAAACACGGGAAAAGATCACGTGGTGATTTGTAGGGtcggtaaacaAGTCTTTAAAGCCTCCAGAAGTAACGAACCGGCCGTCGGATGAGCATGGGGCCCATGGGC
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
276Start:
312402End:
312677Strand:
+>Scaffold10058_LTR-Cassandra_8
CATGAGGAGAGCTTAAAAGAATTGATTTAGCTACCTATGTCACCAAAGTGCACTTATCttttcggttaACCATCCCGAGAGAACTCCAGAGTTAAGTTTGCTTGTGCTGGAGCAATTTAAGGATGGGTGACATATCAAGAAGTGATTTCCGGTACCATGTGAATGAGGACAAAATACGGGAAAAGATCACGTGGTGATTTGTAGAGTCGGTAAACAAGTCTTTAAAGCCTTCAGAAGTAACAAATCGGCCGTCGGATGAGCGTGGGGCCCATGGGC
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
92Start:
312654End:
312745Strand:
+>Scaffold10058_LTR-Cassandra_9
CGGATGAGCGTGGGGCCCATGGGCGGTTTGGGCGTTACAAGGTGACAGTCTTGGTGCGCAACGAGGACATTGCGATCTGTTAATGGGGGTGA
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
343Start:
312747End:
313089Strand:
+>Scaffold10058_LTR-Cassandra_10
TATAACACCCCAGAATCTGAAGATTTGGTGGTGCATGAGGAGAGCTTAAAAGAATTGATttgactacctaTGTCACCAAAGTGCACTTATCTTTTCGGTTAACCATACCGAGAGGACTCCAAAGTTAATCTTGCTTGAGCTGGAGCAATTTAAGGATGGGTGACTTATCGGAAAGTGATTTTCGGTACCGTGTAAGTGAGGACAAAACACAGGAAAAGATCACGTGGTGATTTCTAGGGTCGGTAAACAAGTCTTTAAAGCCTCCACAAGTAATGCACCGATCATCGGCCGAAGGTGGGGCCCACGGGCTGGGCCCTTGGACGGTGGCGGTCGGGGTTTTACA
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
105Start:
313095End:
313199Strand:
+>Scaffold10058_LTR-Cassandra_11
GTATTAGAGCCGAACCCAGACAAACGTGGAGTCAAGAGAGGTCACGCTGTCGGGGGTGACGGTCTTGGTGCGAACGAAGACGTTGCGATCTATTAGTGGGGGTGA
Boechera stricta (v1.2)
ID:
Scaffold10058_LTR-Cassandra_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
308Start:
313201End:
313508Strand:
+>Scaffold10058_LTR-Cassandra_12
TGTAACACCCCGGAATCTGAAAATTTGGTGGTGTATGAGGAGAGCTTAAAAGAATTGATTTGACTATCTATGTCACTAAAGTGCACTTAACGTTTTGGTTAACCATCCCGAGAGAACTCCAGAGTTAAGCGTGCTTAAGCTGGAGCAATTTAAGGATAGGTGACCTATCGGGAAGTGATTTTCGGTACCGTGTGAGTGAGGATAAAACACGGGAAAATATCATGTGGTGATTTGTAGGGTCGGTAAAcaagtctttaaAGCCTCCAGAAGTAACGAACCGACCGTCGATGAGCGTGGGGCCCATGGGC
Boechera stricta (v1.2)
ID:
Scaffold10199_LTR-Cassandra_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
112Start:
682653End:
682764Strand:
+>Scaffold10199_LTR-Cassandra_13
TGGTATCAGAGCCGAACCTAGACGAGTGTGGAGACAAGTGGATGGTCTCACACCGTTAAGGGGTGACGGTCTAGCTGCGCAACAAGGACGTTGCGGTCTGTTAGTGGGGTGA
Boechera stricta (v1.2)
ID:
Scaffold10199_LTR-Cassandra_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
341Start:
682766End:
683106Strand:
+>Scaffold10199_LTR-Cassandra_14
TGTAACAACCTAGGTTAGAAATATGGTGGTGCATGACGAGAGCTTAAAAGAATTGATTtggccacctatGTCACCAAAGTGCACTTATCTGTTCGGTCAAACACCCTGAGAGAATTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAATTTCATGATGGGTGACCTACCGGAAAGTGATTTCTGGTACCGTGTGAGAGAGGACAAAACACTGGAAAAGATCACGTGGTGATTTGTAGggtcggtaaacAAGTCTTTAAAGCTTCCAGAAGTACTGCACCGACCATCGGCCAAGGGTGAGGCCCACGGGCTGGGCCCATAGACGGTGGCGGTCGGGGCGTTACA
Boechera stricta (v1.2)
ID:
Scaffold10273_LTR-Cassandra_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
277Start:
2932318End:
2932594Strand:
+>Scaffold10273_LTR-Cassandra_15
TATAACACCCCAGGTTGGGAATATGGTGGTGCATGAGGAGAGCTTAAAAGAATTGATTTGACCATCTATGTCACCAAAATGCACTTATCTTTTCGGTCAAACACCCTGAAAGAACTTCAGAGTTAAGCGTGCTTGAGATGGAGCAATTTCAGAATGTGTGATCTACCAGAAAATGATTTCCGGTATCGTGTGAGTGAGGACAAAACACGGGGAATGATCACGTGGTGATTTGTAGGGTCTGTAAACAAGTTTTTAAAAGCCTCCAGAAGTAATGCAC
Boechera stricta (v1.2)
ID:
Scaffold1040_LTR-Cassandra_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
90Start:
550813End:
550902Strand:
->Scaffold1040_LTR-Cassandra_16
CGCAATGTCTTCATTGCAAACCAGACGTCACACTCGCCAATGTAAATCCAAATGACTCATCACTCATCTAGGCTCGGCTCAAATACCACT
Boechera stricta (v1.2)
ID:
Scaffold11797_LTR-Cassandra_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
329Start:
8995End:
9323Strand:
+>Scaffold11797_LTR-Cassandra_17
TGCACGAAGAGAGCTTAAAAACAATGATTTGGCTACATATCTCACTAAAGTGCACTTATTTTTTCTCTTAAATATTTTGTTAGAACACCAAAGATAAGCGTGCTTGAGCTGTAGTAATTTCAGGATGGGTGACCTATTGGAAAGTGATTTCCGGTACCGTGTGAGTAAGAAAAAAACACATGGAAAGATCACGTAATAATTTGTAGGATCGGTAAACAAATCTTTAAAGTAAGCCTTTCGGAGTAGCGATCCAACTGTTGGATAAAGGTGGGGCCCATAGGCTGAGAGAGGATGTGGGCTCCATGGACGGTGGCGGTCGGAGAGTTACA
Boechera stricta (v1.2)
ID:
Scaffold11797_LTR-Cassandra_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
105Start:
9488End:
9592Strand:
+>Scaffold11797_LTR-Cassandra_18
TTTTTAAAGCCTTCCGGAGTAGCGAACCGACTATCGGATGAAGGTGGGGCCCACGAGCTGAAAAAGGACGTAGATCCCACAAACGGTAGTGGTCGGGGCGTTACA
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
109Start:
209505End:
209613Strand:
+>Scaffold12302_LTR-Cassandra_19
GGAATCAAAGCCGAATCCAGACGAGTGTAGAGTCAAGTGGACTCACACCGTCGGGAGGTGACAGTTTTGGTATGCAACGAGGACGTTGTGATTTGTAAGTGGGGTGAAT
Boechera stricta (v1.2)
ID:
Scaffold12302_LTR-Cassandra_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CassandraLength:
287Start:
209613End:
209899Strand:
+>Scaffold12302_LTR-Cassandra_20
TGTAACACCTCAATTTATGAAAATATGGTGGTGCATGAGAAGAATTTTAAAGAATGTATCTGGCGACTTATGTCATCAAATTGCACTTATCTTTTAGGTCAAACATTCTGTCAGAACTCCAGAGTTAAGCGTGCTTGAGATAAAGCGATTTCAAGTATCATGTGGTTTTGGTCGGTAAACTAGTCTTTCAAATTTTCTCAGTATCGAGCCGACCATTGGACACAGATGGATCTACAGGCCGAGAGAGGACATGAGGGCCCATTAACAGTGGCAATCGGGGCATTTCA