ID Class Order Superfamily Length Start End Strand View
scaffold20|size3674719_SINE_1 RetrotransposonsSINESINE38411497951150178-
scaffold47|size1723498_SINE_2 RetrotransposonsSINESINE3615052150881+
scaffold8|size4582595_SINE_3 RetrotransposonsSINESINE22524800292480253-

Total 1


Boechera retrofracta (v1.0)

ID:

scaffold20|size3674719_SINE_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

384

Start:

1149795  

End:

1150178

Strand:

-

>scaffold20|size3674719_SINE_1

TTTTTTGTTTCTTTTCTGTTTTTTTTCTTTCTGTTTTTAATAATATTTTAATAATGTATATCATCCCGAATAGACTTAGTAATAGGCCAATACAAGCTCGTCGGATTACAAAACAGAAATAGAAATTCCGGGTAAAACTAAATGGTACATTAAGGTTGCAAATTAGACGTGCAAAGAACCACGGTTCAACCGCAAGCAAGCTCTGGCGGTTACAAGGAAGTCACTTTACGTCCACGTTCAACATCGAACCCTCTAACTGGAGTAACCGTATTCAACCGTCCGACTCGAGGCCGACAGTAGCCTGATCCCCGCGACTTTCTCCCGGCAGAGGTTGATCACTAGGATCAAACCCTCAAGCCTCTTGTCCCACATCTATTAACAAGA

Boechera retrofracta (v1.0)

ID:

scaffold47|size1723498_SINE_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

361

Start:

50521  

End:

50881

Strand:

+

>scaffold47|size1723498_SINE_2

TCTTTCTTTATGCTAGGTCTGGGGTTAGAAGGTTGAGGGATTCAGTTTCTTGTGGCCGATATCTTCTGGGAGAAGCTCGCGGGATCATGTTTGTTAAAGATGACGACTGGAACCAGTTACTTCGGTCAGAGAGCTCGTTATCAAAGACGTAGCCGCAAAGTGAGTTTCTTGTAACCATCGGAATTAACAGAGGGTCTGAGGGAGGCCCGTGTCTTTTGTTCCCATCCAGATTCAGATTTTTTCTCCGATTAACTTTAGTTAGACGATCCATATTTTTTTTTTTTGTAACCCGAATTTCCGATTATCGAACCATCACCTAAGCTTATTTGGGGATGCTTAATAAAATATAAAAAAACAAAAA

Boechera retrofracta (v1.0)

ID:

scaffold8|size4582595_SINE_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

225

Start:

2480029  

End:

2480253

Strand:

-

>scaffold8|size4582595_SINE_3

CCCGACCTAGCAAAAAGAGGAACACAAACACTTCAACTCACCACACCTCCGTCGCTTCTCCATCACCGTTCCTCCTCCGAAGACCTAACCAATCTTCAATCCGGTACAAAGGCGATACCAAAATCGGCAGCCGAGAGAGAAAATGGCTTAAATCAAACTCTCACCAGCCAAACCCGAATCTAGCCTTCACAAAGCCAAGGGAGGATCCGCCGTGAACGCCCTCTT