ID Class Order Superfamily Length Start End Strand View
scaffold108|size217085_Retroposon-L1-dep_1 OtherRetroposonRetroposon-L1-dep1651072410888-
scaffold10|size7684569_Retroposon-L1-dep_2 OtherRetroposonRetroposon-L1-dep19017737931773982+
scaffold10|size7684569_Retroposon-L1-dep_3 OtherRetroposonRetroposon-L1-dep20964624116462619+
scaffold11|size3486627_Retroposon-L1-dep_4 OtherRetroposonRetroposon-L1-dep1423463034771+
scaffold14|size2922549_Retroposon-L1-dep_5 OtherRetroposonRetroposon-L1-dep26624894232489688+
scaffold152|size82553_Retroposon-L1-dep_6 OtherRetroposonRetroposon-L1-dep2616166761927+
scaffold35|size2995437_Retroposon-L1-dep_7 OtherRetroposonRetroposon-L1-dep14414749041475047-
scaffold48|size861383_Retroposon-L1-dep_8 OtherRetroposonRetroposon-L1-dep144498659498802-
scaffold4|size9045706_Retroposon-L1-dep_9 OtherRetroposonRetroposon-L1-dep246465670465915+
scaffold4|size9045706_Retroposon-L1-dep_10 OtherRetroposonRetroposon-L1-dep34457906285790971-
scaffold4|size9045706_Retroposon-L1-dep_11 OtherRetroposonRetroposon-L1-dep17471222937122466+
scaffold57|size1039215_Retroposon-L1-dep_12 OtherRetroposonRetroposon-L1-dep296675909676204+
scaffold5|size8047781_Retroposon-L1-dep_13 OtherRetroposonRetroposon-L1-dep80931602613161069-
scaffold6|size5173884_Retroposon-L1-dep_14 OtherRetroposonRetroposon-L1-dep39812835281283925+
scaffold7|size4355475_Retroposon-L1-dep_15 OtherRetroposonRetroposon-L1-dep44025674562567895-
scaffold86|size359480_Retroposon-L1-dep_16 OtherRetroposonRetroposon-L1-dep253335332335584+

< 1 > Total 1


Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_Retroposon-L1-dep_1

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

165

Start:

10724  

End:

10888

Strand:

-

>scaffold108|size217085_Retroposon-L1-dep_1

GCGGGTACATAGAGACAAAAATTTGAAAAAGACAAACAAATAGAATAAATAATCTTAAAAAGCAGTGAATAGCTAACAACTAAAGATTTCAAAGCAACAAAACTGAAAATTCTTCACCATAAGTCACGACAAGTATTTCTATAGAACAGTTTGGCGCCGGAGAAT

Boechera retrofracta (v1.0)

ID:

scaffold10|size7684569_Retroposon-L1-dep_2

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

190

Start:

1773793  

End:

1773982

Strand:

+

>scaffold10|size7684569_Retroposon-L1-dep_2

GCCGGGTTTTCCAGTGTTCGCGTGTTTGATCTGTTGGTCTTGATTGGTGTATCCCCTTATCGGAGTTCAAGGTTTTTTCCTTGTGCCTTAGTCGTTTGAGTTTTTCAGCTCTTTGGTGAGGAAACTTTGGTTTGGCTTATGTTCTTTGGTTCCTTTGTGTTCCTGCTTTCATTTCTGCTGGAGTTGTTGT

Boechera retrofracta (v1.0)

ID:

scaffold10|size7684569_Retroposon-L1-dep_3

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

209

Start:

6462411  

End:

6462619

Strand:

+

>scaffold10|size7684569_Retroposon-L1-dep_3

GGGTTGAAGACATTGCAGAGGGTTTAGGTCTTCTTTTCTTCTCTTGCGAGGAGAATGACTAGTTAAGTGTCTGTGGATGGTCTTGACTAGGCTCATGTGTCCGCGTGCAAGTCTTGAAGATCTGTTTGATGTTCCCTGATTGATCTACAAGGTTTACCTTGTTCCTATAGTGCTCGACTGTTTTGGCCTTAGTGGTGTATGAGTTGGTT

Boechera retrofracta (v1.0)

ID:

scaffold11|size3486627_Retroposon-L1-dep_4

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

142

Start:

34630  

End:

34771

Strand:

+

>scaffold11|size3486627_Retroposon-L1-dep_4

TTATGACTGCCTTTTTGGGCATGTGTCTCTTGGGGTTTCTATGTATCCACCGGCTTTGTATCCGGAAGGATTTCATGCCTTGCCGTTATGTATAACTCCAACGTATCTTATCAATGAAACATTTAGACGACAAAAAAAAAGA

Boechera retrofracta (v1.0)

ID:

scaffold14|size2922549_Retroposon-L1-dep_5

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

266

Start:

2489423  

End:

2489688

Strand:

+

>scaffold14|size2922549_Retroposon-L1-dep_5

CTGTCAAGCCATCTATTAGCCTCTTTCTGAAGCTTTTTTTGGATGTTTGGTTTTGAGGTTTCAGGCAAAACAGTTGTTGCGTTCTTCGATTCTTCTCTTGCGAGGTCGTTGTCAGTTCCAAATTCTGTAGATGGCTGGTTCTGTCTTGACGAATGTACGCGTGTATGAATATATATCTTATTGGGCTTATCTCCATTTGATTTCAAGGTTTATCCTTGATCCTTCTGTTTCGTGTTTCCTCTGTCGTTTTGTTGGGGTGTAATGGT

Boechera retrofracta (v1.0)

ID:

scaffold152|size82553_Retroposon-L1-dep_6

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

261

Start:

61667  

End:

61927

Strand:

+

>scaffold152|size82553_Retroposon-L1-dep_6

AAGCTATCTACTAGCCTCTTTCTGAAGCTTTTTTGGAGTTTTGGTTTTGAGGTTTCAGGCAAACAAGTGGTTTCGTTCTTCGATTCTTCTCTTGCGAGGTCGTTGTCAGTTCCAAGTTCTGTATATGGCTGGTTTTGTCTTGACGAATGTCCGCATGTAAGAATGTTGATCTTATTGGGCTTATCTCCATTCGTTTTTCAAGGTTTTGCCTTGATCCTTCAGTTTCGTGCTTCCTTTGTCAGTTTGTTGGGATATGATGGT

Boechera retrofracta (v1.0)

ID:

scaffold35|size2995437_Retroposon-L1-dep_7

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

144

Start:

1474904  

End:

1475047

Strand:

-

>scaffold35|size2995437_Retroposon-L1-dep_7

TTTTTTTTTTTTTTTTGGCCGTCTAAAGGGTAGATTATATAAACTTGATGAAAGTTACAAATGCCGCAATCAACGAAATGATCCCAGAACTAAGCCGACAGATAATAAGATATCCTCGGAGACTAAGCCCAAAAGAGGGAGACA

Boechera retrofracta (v1.0)

ID:

scaffold48|size861383_Retroposon-L1-dep_8

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

144

Start:

498659  

End:

498802

Strand:

-

>scaffold48|size861383_Retroposon-L1-dep_8

AAAAGAGAAAAACTAAGAAGAGAGAGAGAGAGAGGGAGACCGGGGCCGGTGCTAGAGGAGCCACCGCACTCCGGTCTCAGATCGGAGAAGAAGGTGGTTGGCGGCTGGGAGTAGACTGAGAAGAAGACGAGAGTTTTTTTTTTT

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_Retroposon-L1-dep_9

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

246

Start:

465670  

End:

465915

Strand:

+

>scaffold4|size9045706_Retroposon-L1-dep_9

TCACTCGGAAGGTTTCTCGTTTCCAATAGCATCTACTAGCTCCTCTTTTTAGACTTTTTTAAGGTTTTGGTGTTGAGTTCAATTCAAGGCGTTGGAATGGGTTCGTTCTTTGGCTCTTCTCTAGCGAGGTTGTGATCGGTCTTATGTCTGTAGGTGGTTGAGGCTGTTCTTCACGAATGTCCGCGTGTATGAGCTGGAGATCCTCTTTGGCGGTTTATCCCTTTGGAGTTCAAGGTTTCCCTTCTC

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_Retroposon-L1-dep_10

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

344

Start:

5790628  

End:

5790971

Strand:

-

>scaffold4|size9045706_Retroposon-L1-dep_10

ATAAAACCATTACACCTCAACAATCTTCAAACCCGACATCGAAGAAAGCAGGGAAAACTGAAGCGAGAAACACATAAACAAACACCATCACACCCCAACAAACTGACAAAGGAAGCACGAAATGGAAGGCTCAAGGCAAAACTTTGACAATCGAATGGAGATAAGCCCAGTAAGATCAACATTCTTACATGCGGACATTCGTCAAGACAGAGCTAGCCATCTACAGAACACAGAACTGACAACGACCTCGCAAGAGAAGAATCGAAGAACGCAACCACTGTTTTGCCTGAAACCTCAAAACCAAAACTCCACAAGAGCTTCATAAAAAGGCTAGTAGATGGCTT

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_Retroposon-L1-dep_11

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

174

Start:

7122293  

End:

7122466

Strand:

+

>scaffold4|size9045706_Retroposon-L1-dep_11

AAAAAAAAAAAACTCTCTCGTCTTCTTCTTAGTCTACTCCCAGCCGCCAACCACCTTCTTCTCCGATCTAAGACCGGAGTGCGGTGGCTCCTCTAGCACCGGCCCTGGTCTCCCTCTCTCTTTCTTTTCTTAGTTTTTCTCTTTTCTCGGCTTTGTTTGGAGAGGATTTTCGCC

Boechera retrofracta (v1.0)

ID:

scaffold57|size1039215_Retroposon-L1-dep_12

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

296

Start:

675909  

End:

676204

Strand:

+

>scaffold57|size1039215_Retroposon-L1-dep_12

AGCCATCTACTTGTCTCTATCTGAAATTCTTTTGGAGTTTTGAATTTGAGTTTTCAGGCAAAACAATTGTTTTATTCTTCATTTCTTCTCTTGTGAGGAGGTTGTCAGTTCCAAGTTCTATAGGTGGCTAGTTCTATACTGACGATTGCCCGCGTGTAAGAATGTTGATCTTATTGGGCTTATCTCCATTCGATTCTCAAGGTTTTCGCCTTGATCCTTCCGTTTCGTGCTTCTATTGTCAGACTGTTGGGATGTGATGGTTATTGTCTCTATGTTTTTGCCTTCAGATTTCTCTG

Boechera retrofracta (v1.0)

ID:

scaffold5|size8047781_Retroposon-L1-dep_13

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

809

Start:

3160261  

End:

3161069

Strand:

-

>scaffold5|size8047781_Retroposon-L1-dep_13

AAGACTCAAAAAGGACAAACAAACCGATTAAAAACCTTGAAAGATAGGCTTAAGAGATAATAGTTAAACAACCCGAATCAACAACACTAAAAACTCTTGCCTATAAGCCACCATCTAGGCAAATCCAGGCGCTGAAGAAAGGCTACCGACAGGAGCCTCGAAAAGAACCCAAAATTAGATTGCCTTCAGATAAACTGAGGGCCCGAGAAGGGAACTAAACTGAGCTCATACAACCACATCCACAGCAGAAAAGAAGGCGGAGAAGCAAGAAGAAATTGAAAACAGAACCTAACCACCACGACCGCTCCAGTAACCAATGAAAACGAGAAGGCGGAGGATCAAGTAGAACCCTTGAGATCCAAGAGGGGAAAACGCCAAAGAGGACCACCCATCCTTGCACACGGACCTTCATAAACCCAGCCAAAGCCACATACAGACACTGGTTACGCCACGCAAAGAGAATGACAAGAGATCGAACCCATCACAATATCTAGAACCTAACCTTGAAACCAAACAAGGTCCCAAGAAAGAGCTAATAGATGCCATTATAGGAGGCTACAATCCGAATGAAGAACCCACTACACGAAACCTTTCGCCAACTCACCACACCGATAAGCCAAGAGGAGGTCACAAAGAGAGGCAGAGCTAGGAGTCAACATACCCAAAAGCTGAAACTAAGGCTTCTAATCACATGACGTAAGACGCAACACAACCCTAAAGTCATCTACTCCATCCAAGAGGAAGAAACCGTAGACAAAAGTTAAACAACCTGAGGATAAAGACGATGAAGGCCATTGCCACAGAACCAA

Boechera retrofracta (v1.0)

ID:

scaffold6|size5173884_Retroposon-L1-dep_14

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

398

Start:

1283528  

End:

1283925

Strand:

+

>scaffold6|size5173884_Retroposon-L1-dep_14

TTTTAGATTTGGGGTTAATTTTGGATCTTATTTCTTCATCTCTGTTGGTTCCTATTGCTGGATTTGTTGCTCGTTTTGGATTGTATTCGATTGGTGTTTGCCTTTGTGAAAGATTTCGTTGTCAAGCCATCTACTAGCCTCTTTCTGAAGCTCTTTTGGAGTTTTGGTTTTGAGGTTTCAGGCAAACTAGTGATTTCGTTCTTCGATTCTTCTCTTGCGAGGTCGTTGTCAGTTCAAAGTTCTGTAGATGGCTGGTTCTGTCTTGACGAATGTCCGCGTGTAAGAATGTTGATCTTATTGGGCTTATCTCCATTCGTTTTTCAAGGTTTTGCCTTGATCCTTCCGTTTCGTGCTTTCTTTGTAAGTTTTTGGGATGTAATGGTGTTTGTCTCTGTGTT

Boechera retrofracta (v1.0)

ID:

scaffold7|size4355475_Retroposon-L1-dep_15

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

440

Start:

2567456  

End:

2567895

Strand:

-

>scaffold7|size4355475_Retroposon-L1-dep_15

AAAGAAATAAAACTAAAAACAAACCAGCTACAACACCGACATAAACGAAGGCAGGACCAGAACGAGAACAGAGAGCTGAAACTAACACCATCAGACCACATAAAGGATCCGATGAGGACGAGAAGACCTAGGCTTAAGGAAAAGAACTTTGAAATCCAGGAGAGGATAAGCCAAAAATGACCAACAACCATTGCACGCGAACCCTCGTAAACCAGTCTCAACCACCTACAAATTTAAAGCCGGCCACCTTTTCGCAAGAAAAGAGCTGAAGATTGAATCCAGTACAACGTCATAATTAAACCCATCTCCCGACCCAAAAGGTCACAGAGAAAAGGTGATAGGTGCCACAACAACGAGCTACAATCCAAAAGACAAACCCCATATTCGAAACTTAACGAACACTAAACACTGGAAACTTGAAGGGAAAGAAAGAACAAAAG

Boechera retrofracta (v1.0)

ID:

scaffold86|size359480_Retroposon-L1-dep_16

Class:

Other

Order:

Retroposon

Superfamily:

Retroposon-L1-dep

Length:

253

Start:

335332  

End:

335584

Strand:

+

>scaffold86|size359480_Retroposon-L1-dep_16

GTTTTATGTGTTGCTTTGATCTAGGTTTTGTATTGGGGTTCGCGGATGGTAGTTCGCAGAAAAGTTATCTAGTAACCTTTTTTGGGGTTTGAGATTGGGTTCAAGGCGATATAGTGGTTTTGATCTACATTTCCTTTCTTTCGAGAGGTGGCCAGGTTTTGGTTTGTAGGTGGTTGAGGCTGGCTTGCGAATGTTTACGAGTAGAAGATGTTGGTCCTCTTTGGCGTATCTATAGTGAGAATTCAAGGTTTCT