ID Class Order Superfamily Length Start End Strand View
scaffold101|size326356_RC-Helitron_1 DNA transposonsRC-HelitronRC-Helitron331137364137694-
scaffold103|size234654_RC-Helitron_2 DNA transposonsRC-HelitronRC-Helitron149205709205857-
scaffold104|size233450_RC-Helitron_3 DNA transposonsRC-HelitronRC-Helitron2702965929928-
scaffold104|size233450_RC-Helitron_4 DNA transposonsRC-HelitronRC-Helitron956424964343+
scaffold104|size233450_RC-Helitron_5 DNA transposonsRC-HelitronRC-Helitron1598232182479+
scaffold104|size233450_RC-Helitron_6 DNA transposonsRC-HelitronRC-Helitron112185825185936+
scaffold104|size233450_RC-Helitron_7 DNA transposonsRC-HelitronRC-Helitron224186266186489+
scaffold104|size233450_RC-Helitron_8 DNA transposonsRC-HelitronRC-Helitron181186479186659+
scaffold107|size219575_RC-Helitron_9 DNA transposonsRC-HelitronRC-Helitron107120332120438+
scaffold107|size219575_RC-Helitron_10 DNA transposonsRC-HelitronRC-Helitron124126252126375-
scaffold107|size219575_RC-Helitron_11 DNA transposonsRC-HelitronRC-Helitron351162238162588-
scaffold108|size217085_RC-Helitron_12 DNA transposonsRC-HelitronRC-Helitron6141530815921-
scaffold108|size217085_RC-Helitron_13 DNA transposonsRC-HelitronRC-Helitron13051693318237-
scaffold108|size217085_RC-Helitron_14 DNA transposonsRC-HelitronRC-Helitron3151885419168-
scaffold108|size217085_RC-Helitron_15 DNA transposonsRC-HelitronRC-Helitron3101925019559-
scaffold108|size217085_RC-Helitron_16 DNA transposonsRC-HelitronRC-Helitron1112054120651-
scaffold108|size217085_RC-Helitron_17 DNA transposonsRC-HelitronRC-Helitron107114012114118-
scaffold109|size213575_RC-Helitron_18 DNA transposonsRC-HelitronRC-Helitron1555168951843+
scaffold109|size213575_RC-Helitron_19 DNA transposonsRC-HelitronRC-Helitron3336209562427+
scaffold109|size213575_RC-Helitron_20 DNA transposonsRC-HelitronRC-Helitron115121836121950-

< 1 2 3 4 5 > Total 176


Boechera retrofracta (v1.0)

ID:

scaffold101|size326356_RC-Helitron_1

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

331

Start:

137364  

End:

137694

Strand:

-

>scaffold101|size326356_RC-Helitron_1

TTTGTAAAGATGTTTGGTGGCTCTGAATTGTCTGGTAGCTTTAGACAATCCAAATCCTTGATGATTTTCCAATCTCCTTTAGTGACATCTTTTGCAAAGTTTTTCAGATGTTCTTTTTTAACAGCAGATTGGATTTTGTTATCCTGCCATAAAAAAAAATTGTAGATATATGATTTTAACTTGTAATACACGTACATAGTAATATTCATAATTAAATACTTACACATTCTTCAACTAAAACCATTTACCAAGTTTCACCGGATCCTTTGGAGTAATGCTTCCATGCATAAAGAATCTTGACTTTAATGCATTAAGATGTTTTGAATGATTT

Boechera retrofracta (v1.0)

ID:

scaffold103|size234654_RC-Helitron_2

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

149

Start:

205709  

End:

205857

Strand:

-

>scaffold103|size234654_RC-Helitron_2

CTAGGGAAAACCTTCATAATTATCTTCTGAAATTTTACATTTTTTTTTTCATTAGACAATTTGCAGATAAGAATATTCGCTGCATAATTTAAACTTTATCTGCAAGTTTTATAAATCTAAAACGGTTAAAATTCCATATCTTTATATTA

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_3

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

270

Start:

29659  

End:

29928

Strand:

-

>scaffold104|size233450_RC-Helitron_3

AACAACATAAATATAAATGGAACAAATAAAACAATATTAGGGATTTAAGTGGAATGAATATTTCGTTTAATGGAATGGGATGATCTTATATATAGTGAAAAGGGAGTGCTTGATTTAAGGGTTTTAGAGAGAATTTTTTTGTTTATATTGTTGCAATTTTTTTTATAGCTTTAGCTTGTAGAGTAATGTGTGAAATTAAATTTTGATAATATCAAGAATTCAAAATATTAAATCCTTAAGTTATTTATGAGATTTTGTTATATTGTATAT

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_4

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

95

Start:

64249  

End:

64343

Strand:

+

>scaffold104|size233450_RC-Helitron_4

AGGGTCACAAAATTCAACCTGGAATTAAGAAAAATAATATCTCAAAATTTCAAAGATTTGTGAAAAAAGGAGAATGTAATATTATCCAATGATTT

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_5

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

159

Start:

82321  

End:

82479

Strand:

+

>scaffold104|size233450_RC-Helitron_5

GACATGTGTCCGTCAATCATTTAGATGTTGACACATATTAAAATATTTTTAACCTTTTTTATAAACCAAATATACTAAAAAAACATAGTTACTTGTATTAATTTATGCATGTATATTAAAAAAAAGTAATAAATATTTTATCTTAACCAAAATGGACAA

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_6

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

112

Start:

185825  

End:

185936

Strand:

+

>scaffold104|size233450_RC-Helitron_6

TCTTATTATATAAATTTTTGTTTTCTCAAAGTTAGTAATTAATATTATCACGACACGTGTCAATTATTTTGATCAAATATTTTCTCGCATGTAAAAAAACTCTTTTTTTAAA

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_7

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

224

Start:

186266  

End:

186489

Strand:

+

>scaffold104|size233450_RC-Helitron_7

TAATCCTAAGTTAAAATCCAAATAACTTGAAATATATACTAAGCTTATAGGAATACTTGATGAGAATATTCAAATATTTTTACTTTATTTTATTTAATAATTTTAAGTGCATGGAAAATTAGTTTGGTATATGTAAATGTATTATCTATAAGATTACGACATATGAAAATATATTAAAATTATGTTTGTTTTCCAAATTTTTTTTATTATTTTTATTAATTATT

Boechera retrofracta (v1.0)

ID:

scaffold104|size233450_RC-Helitron_8

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

181

Start:

186479  

End:

186659

Strand:

+

>scaffold104|size233450_RC-Helitron_8

TATTAATTATTTTCTTAATTTTTATTATTATTTGTTTCATACTAACTAAGAAATATATTTCATATGATGCACATATTATTTTTGATATAAAATTTTAGCTCTTATCCATTGTGATGAAGCTTCTAGAATTAAAATTATATTTTAATATGATGGGGTAGATAATTAAACTGAACTGTAAAAT

Boechera retrofracta (v1.0)

ID:

scaffold107|size219575_RC-Helitron_9

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

107

Start:

120332  

End:

120438

Strand:

+

>scaffold107|size219575_RC-Helitron_9

ATACTATTAATTAGGAATTACACGTTATAAAAAAACATTTAAATTATAAACAATTACATATAATATTATTGATTTTAAAAGAAACAAGAAAAAAGCATTAAGGATAA

Boechera retrofracta (v1.0)

ID:

scaffold107|size219575_RC-Helitron_10

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

124

Start:

126252  

End:

126375

Strand:

-

>scaffold107|size219575_RC-Helitron_10

AATATATTAAACCCAAACCCAGAATAACCCGAACCGAATCCGATCCGAATATATAACATACCCGAATGGGGTCTAGAGGCCTAAACTTGAAAACCCGTACCGAACCCTGAACACCCATGCCTAG

Boechera retrofracta (v1.0)

ID:

scaffold107|size219575_RC-Helitron_11

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

351

Start:

162238  

End:

162588

Strand:

-

>scaffold107|size219575_RC-Helitron_11

TTTCTTAACATTAAATTGAAAATTTTAGATATGCTCTTTCTTAATTTATGCTTGAATTTTGTTACCCTGAAAATATACACACAAATAAACATTAATATTTATCGCAATATTATAAATATTACATTATATTAAACATATTAAAACGCTAGTGAAACTTACAGAATCATTTGATAAAACTATTTCTAACGATACTCGTGTTTTTTGGCATAGTGCATCTAAGAATGAAGTATTTTAATTCTAATACACCAAGATGATTTAAATGGTTTTAAATCTTTGACAGAAGAGTACTTGACCGAGATTGACATTTTTTTTTTAATTGTCGATATGAAGGAAAAAAAAAGTTTTGGTTTG

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_12

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

614

Start:

15308  

End:

15921

Strand:

-

>scaffold108|size217085_RC-Helitron_12

ATAACGAATGTTACAAAGATATTACCTTCATGAATAACAAATCTTTAGCTTTTGTTTCTAGTAAAGATTTTGAAACACCTCTTTAAAAACAACATTTATGGTTTGATTTTGTGGTTGACCTTTCTTGTTTGTAATAAGAATCTTCAATCCTGCTTTTGACTTCACTCTAGATATTGCAACATATAGTTGTCCATGAGAGAAAACTGGTCTAGGCAAATAAAGTCCAACACACTCTAGTGTCTGCCTTTGACTCTTGTTGATGGTCATTGCAAAAGCTACAGACAAAGGATATTGCCTACGCCGCATTTTGAAAGGCAATCGTTTGTCTGATGGTGTGATCAACATCCTAGGAATCAGAACTATCTTCCCAACTCTATTACCTGTAATAACTCTAGCTTCAACGACATGATCAGCCATTTGTGTGATTTGTAGCCTTGTCCCATTGCATAAACCTGATTTAGGATCGATGTTTCTGAGCAACATGACCGGACAACCAATTTTGAGGCGCAAACAATGGTTTGGCAAATCTGATACTTTGACACTGTTTAAGAAATCCGTCGAATAGACAGGATTATTTGTAGAACTTGTGTCAGAAGGGTCTATATTTCGAGCTT

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_13

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

1305

Start:

16933  

End:

18237

Strand:

-

>scaffold108|size217085_RC-Helitron_13

TCCATGCATTGCTTCTTGTTTGATGATGATTGATCAGATACATCAGAAACATCTTCTTTTCTCTTTGACGATGTAGAAACGATTCTCATATTAGTGTCAGATTTCTCACTACTATTAGTGACCATTAACATCTGAAATATGATTAACACATCAAAATGAGAGAATATAAAATTATTGATAAAATTAAATAATATTTTTAAAAATACCTGTTCACTGGAACATAATGATGATTTATCGAGAGGAAGTTCTGATTCATTAGACATTTCTTCATTCACATTATTAGTCGAATAAACTTTAGCAACTTTATAGACATCATTTCCGCTGTATATGTAGTCTTTCTCCACACATACCACAAATTGATATGTTTTGCCAACAATATTTTAATCACGTCAGGCAATGCTTCAGGATCTTCAATCTATATGTATAATTTAAAATTTAGTCATACTTCCATTAATTTAAAAATAATAAAACAGTTTAAAAATAATACCTCATCATATGAACCATTTAAGAGTTCAGCACAAGATTGACCAACTATTTGTTGGACAAAAGAGTCAAACAACATAAGTTTGCTCTCTCCCGTATTATCCATTATCAAAAGATGAAACCAATATTTTTAAAAGAAAATACAAAACAAAATTAACAATTTATAATATTAAACATTGTATTTATTAATAAAATTAGTACATATCTAAAAATTTATTAATTAAAATTACCTTCCAACTACTGAGCTTACGTCTTTAGTGCATGTATCACACCAGAATAAAGACCTTTCAACAGCTTCACTGATATTTATTTGGCTTTTGACAACTTTTTTGTTATATTTACGACAACTAAAGTAGAACCATGGCCAATCCATATCAATAGCCATAATGGTACAAATGATTCTAACTTTGGCAAATCAAAGAATTTCATGTTAGTTTAATATAAATTGCTTAAACCTATGTTTAACATATTTAATTAAATAAATATAACAAATACCTCAAGAGCCTCCCGAAAATCTTTAATAGTTTTCTTTGGATATTGAATTAAGGTTTCTTCTCCCATAATTAAAGGGATAAATTTTGGCTTCGGTTCCGTGATTGTCAAAGCAAGTCCATCAGATGGAAGCCTAGATCAATTTGTATAAAATGAGTCATCAAGTATTGTTTTGTATATCCTTAATTCCAGGTAAATAATAAAAAAAAAATCTTTGTAAAGTTTGATACTTATATTTTCTTGAAGTCATCAACACCAGGTAAAGTTGAGTTAAACAACACTTCAGAAGCATCAAAAGCATTTGCAATGCTTCTAATTCCTGGAAAAACA

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_14

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

315

Start:

18854  

End:

19168

Strand:

-

>scaffold108|size217085_RC-Helitron_14

TACATACCTTTGTATAGTCCTAACTTGCCCTATCTTATCAAACATATAACCATCTGACCAACAAATTTTTCTAAAACTTATGAATTTGGTGAGCAAATTTGCCCCAAAGTGTATAGGGTAAACGGTTATCACTGAAAAAAATAAATAAGTATTAACCATTTTTAAAATAAACCATATATTAAAAACGCACAGACATGTGAATAAATACTTACTCAGAGTCTCGTATCTCAAAATTAATTTTCTTCGTAGCCTTCTCTTGAACATCTATGGTACTGATTTCTTCAACATTCACCAGTTGATCAAGCACATCTATAA

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_15

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

310

Start:

19250  

End:

19559

Strand:

-

>scaffold108|size217085_RC-Helitron_15

ATAATCATCTAGTCGCCTTTTCACAAATTTTTGAAATTTAGAGATGTGTTCTTTTTTTTATCCCAAATTGAATTTTGTTATCCTGAAAATATAGACACAAAAAATATTAAAATTTATAAATATAAGAAATGTTACATTATATTAAACATATCAAAACACAACTTCAAGCACTTACAGAATTATCTGATAAAACTATTTTCAAATATGCTCCTGTTTCTTTGGCATAGTACATAAAAGAATGAAGTATTTTTAATCGAATGCACCAAGAAAATTTAAAAGGTTTTAAATCTTTAACATATGTGTATTTTGT

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_16

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

111

Start:

20541  

End:

20651

Strand:

-

>scaffold108|size217085_RC-Helitron_16

ACCCTTGATGAGAGATTAAAATTTGTTCTTTGAAACAATGGTAATGTTATGTAATTATCAACAGTTTTTAAAGTTAATTTTCTAAATGTACTTCCTAAATAATATATAGGA

Boechera retrofracta (v1.0)

ID:

scaffold108|size217085_RC-Helitron_17

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

107

Start:

114012  

End:

114118

Strand:

-

>scaffold108|size217085_RC-Helitron_17

TTAAAACAATAGTTTTTTTTTACACATCACATTTAATTGATAGACTTGACATATGTTACGATCATGTGAGTTAGTAATTTTGATAAGCCAAATTTCATATAATAAGA

Boechera retrofracta (v1.0)

ID:

scaffold109|size213575_RC-Helitron_18

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

155

Start:

51689  

End:

51843

Strand:

+

>scaffold109|size213575_RC-Helitron_18

TCGGTTTTTTAAAATTTCAAATTTTTAACCGAATTAAACCGAGTAATTGAATCGGTTCGGTCGGTTCGGAAATTTATTAGTCGGTTCGGTTATCTAATTAATCGGATTAAAACCAAAAATTCAATTATAATTGGTTTAATCGGTTTTGTCCGGTT

Boechera retrofracta (v1.0)

ID:

scaffold109|size213575_RC-Helitron_19

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

333

Start:

62095  

End:

62427

Strand:

+

>scaffold109|size213575_RC-Helitron_19

AACATACCTTAAAGATGTCAAACCTTTCAAAACAGGATGGCGCATCCGCGTGAAGATCCTCCACATGTGGCCTCAATACACAGAGACATTAGACATGGTCCTTTGTGATGAATCTGTAATTTTCTCTACTCTTTAGTATTTTCAAAAAATCTATAACTTTTTGTGTTTATAACTAAACTTTTAGTGTGTTATTTTTTCTTATAGGGTTCTAAGATGCAAGCCAAAATTAGGAAGGCTTATACAACTCGATTTCAGAGGGAACTTAAAGTCTGGTGAATGAAAGATCATTGATACCTTTACCGTGGCTTCTTTCTTATAGAAAATATAAGGTAT

Boechera retrofracta (v1.0)

ID:

scaffold109|size213575_RC-Helitron_20

Class:

DNA transposons

Order:

RC-Helitron

Superfamily:

RC-Helitron

Length:

115

Start:

121836  

End:

121950

Strand:

-

>scaffold109|size213575_RC-Helitron_20

GAGAACTCAACCGGATTTATTGAAATCCCAAATCTTGAATGAACAATTCTTCTTCTGTGTAATAACAAAGATGCAATGGCTGAAGACACAACACACTCTTATCTTACATGTAATA