Boechera retrofracta (v1.0)
ID:
scaffold10081|size420_LTR_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
152Start:
1End:
152Strand:
+>scaffold10081|size420_LTR_1
TCTGAGAGAAGGTTAGAGATCATGCTGCAACAGGTTCTAGATGGACAAAGCAAAAATTCTCAGGAGATATCTGATCTTGCTTGGAAGTTTGAAGGTTTGAGCTGTGAGTTTCAGCGCGAAGTGAAGACCAGAGAGAATGCAGTTCAGTCCAG
Boechera retrofracta (v1.0)
ID:
scaffold10081|size420_LTR_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
239Start:
181End:
419Strand:
+>scaffold10081|size420_LTR_2
GATCGATCGATCCAATCTTTAGCTCTAGGAAAGACACCTGCATCTGCGAGTCTTCCTCTATATATCCCAAAGGTTCCATACCCTTGTGCAGTTAAGCCTCCTCCATTTAGGCTTCTGCCAAAGCTTGCAGATCCAGGGAAGTTTGTGGTTCCTTGTTCTATTGATGGGGTTGCTTTTGAGGACTCTTTATGCGATTCAGGATCTACAGTGAATATCATGTCTGTGGATATCGCGCGAAG
Boechera retrofracta (v1.0)
ID:
scaffold1011|size7176_LTR_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
317Start:
381End:
697Strand:
+>scaffold1011|size7176_LTR_3
GTTTGTTTCAGTAATCTAGAAAAGAAAAGAAAAAGAAGATAGAGCTGTAGAAGAAAACGAATTAGCTAGAGTGTTTCACCCTGTTAATCTGTTTTGCTTCTGTTTTGTGAACTGTTTTGTTGCATCTTGTTTGATCGATTAGAATTGAATTGAATCATCATATTAGGCTGTTGTTTGCATCATTAGAGACTGAATTTCGTGGCTGCTAGGTTGCTAAAGGAGAAGACGAAATTTGGAATTAGGGTTTTAGGAGAATTAAGTGCAGTTTCCTTTTTCTATTTCAGCTGCATTTCCTTTTTCTATTTTATCTGAATTTC
Boechera retrofracta (v1.0)
ID:
scaffold101|size326356_LTR_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
132Start:
19819End:
19950Strand:
->scaffold101|size326356_LTR_4
CTTTCCTGGTAGAAACCCCTCTTGTCTTTTCACAGCAGCTGCGGTCTGAGCAATCTGAGTTTCGAGCTTCTTCTGCGACAGATTCAACGCCTCAATCTTGCCATTCAGGTCGATATACAAGTTATCCAGCTT
Boechera retrofracta (v1.0)
ID:
scaffold101|size326356_LTR_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
132Start:
48920End:
49051Strand:
+>scaffold101|size326356_LTR_5
AAGCTGGATAACTTGTATATCGACCTGAATGGCAAGATTGAGGCGTTGAATCTGTCGCAGAAGAAGCTCGAAACTCAGATTGCTCAGACCGCAGCTGCTGTGAAAAGACAAGAGGGGTTTCTACCAGGAAAG
Boechera retrofracta (v1.0)
ID:
scaffold10210|size416_LTR_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
109Start:
1End:
109Strand:
+>scaffold10210|size416_LTR_6
CTAACCGTCATTAAAGTCAGGCTCGTGACATTAAACAAGCGCTCAGTGGGAGGCAACCCACTGGTGATTCTGTACATACTAGTTTTGGTTTTTGGTTTTTGCTAATTTT
Boechera retrofracta (v1.0)
ID:
scaffold102|size241018_LTR_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
131Start:
1434End:
1564Strand:
+>scaffold102|size241018_LTR_7
AAGCTGGACAACCTGTATACGGACCTGAATGGCAAGATTGAGGCATTGAATCTGTCGCAAAAAAGCTCGAGACTCAAATTGCTCAGACCGCAGCTGCTGTGAGAAGACAAGAAGGGTTTCTTCCAGGAAAG
Boechera retrofracta (v1.0)
ID:
scaffold102|size241018_LTR_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
107Start:
5771End:
5877Strand:
+>scaffold102|size241018_LTR_8
GCCTAACCGTCATTAAAGTCAGGCTCGTGACATTAAACAAGCGCTTAGTGGGAGGCAACCCACTGGTAAGTCTGTATATACTAATTTTTGTTTTTGTTTTCTTTTGT
Boechera retrofracta (v1.0)
ID:
scaffold102|size241018_LTR_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
397Start:
186176End:
186572Strand:
->scaffold102|size241018_LTR_9
TTTGGTTTATGGACGTTGTAGGGTAGTTGCTACTTGTTTTGTGGGGTTACAGCAGTTCCTGTGGTGAATATTTTTTACACATCACCCACTTTAGTTCCTCCCATGTTCTGATCTTTGTGTCATTGTAATGCCATTGATTATACTCCTCACAATCCCACCACTTTAAGGCTTCTCCCTCGAATTGCCCAAGAGTAATTGAAAGCTTTTCTTCATGGGGCGTTTTGTAGTACCAAAAGTACTCATGCATGTTAATTTCCCATTGTAGATACCCTATACCATTAAACAAGAAAAATTCAGGCCCAAAACGTTCATAACCATCATCATAAATTAACATAATTCAAGATTTATAGGTAGCTCGGAATGTGGCTCGTGGTATTCGACTCCATAGGGTTCTTGG
Boechera retrofracta (v1.0)
ID:
scaffold102|size241018_LTR_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
124Start:
206183End:
206306Strand:
->scaffold102|size241018_LTR_10
AATCACTCTTATGTTCGGACTCTTGTTCTCCCCAATCAATTTCCAAGGTGTTGAGCTCAATCTCAGCTTCTTCCCCATAATCCATAGCTCTAGATTGTAGTTATACCTTGCAAAACAAAAAAGA
Boechera retrofracta (v1.0)
ID:
scaffold10365|size412_LTR_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
139Start:
106End:
244Strand:
+>scaffold10365|size412_LTR_11
AAGCTGGATAACTTGTATATCGACCTGAATGGCAAGATTGAGGCGTTGAATCTGTCGCAGAAGAAGCTCGAAACTCAGATTGCTCAGACCGCAATCTGAGCAATCTGAGAAAAGACAAGAGGGGTTTCTACCAGGAAAG
Boechera retrofracta (v1.0)
ID:
scaffold103|size234654_LTR_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
159Start:
43104End:
43262Strand:
+>scaffold103|size234654_LTR_12
GATCGATCGATCAAGCGGAGGATCGATCGATCTGTTTCGCCGTAAAGTTTTTGGATCGACCCAGGTGTTTCGGTTCGATCGGTCAAGATTCTGATCGATCGATCCAACATATGGATCGATCGATCATGTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAG
Boechera retrofracta (v1.0)
ID:
scaffold103|size234654_LTR_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
377Start:
89936End:
90312Strand:
+>scaffold103|size234654_LTR_13
TTTTCAAACCTCTTTCTCTAACTTAGTTTTCTGTTTTGCTTGAGGGCAAGCAAAAGGCTAAGTCTGGGGGAGTGATATATCATGGATTTTACCCGTTTTTAGCCATGATATAAGTCGTTTTATCGAGTCTTTCTAGTGCTTTTTCTATCATTTTAGAGTCTTTTCAGGTTTTAGCACGTTTGGGACGAAATTGGAGATTTTGGAGACATTTGGAGCTTTTTGGCAATTCGTTGGAAGACTTTCCACCGTTAGATCGAGCTGAAATTTTGACACAAGATAGATCTTTGATTTAGCTTTCGTTTGCAAGTGGTTTGAAGGAAATCCAACGGTGCGATCAAAAGTTATGCCAGTTGTCGTGAAGACAGTCTAGTCTGGCG
Boechera retrofracta (v1.0)
ID:
scaffold103|size234654_LTR_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
153Start:
179729End:
179881Strand:
->scaffold103|size234654_LTR_14
GTGGGCTCTTGGATCTTCAGTCTTTCCTGGTAGAAACCCCTCTTGTCTTTTCACAGCAGCTGCGGTCTGAGCAATCTGAGTTTCGAGCTTCTTCTGCGACAGATTCAACGCCTCAATCTTGCCATTCAGGTCGATATACAAGTTATCCAGCTT
Boechera retrofracta (v1.0)
ID:
scaffold10424|size411_LTR_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
127Start:
275End:
401Strand:
->scaffold10424|size411_LTR_15
CTGGTAGAAATCCCTCTTGTCTTTTCACAGCAGCTGCGGTCTGAGCAATCTGAGTTTCGAGCTTCTTCTGCGACAGATTCAACGCCTCAATCTTGCCATTCAGGTCGATATACAAGTTATCCAGCTT
Boechera retrofracta (v1.0)
ID:
scaffold104|size233450_LTR_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1405Start:
119621End:
121025Strand:
+>scaffold104|size233450_LTR_16
TGATATATCTCGGTTTTCACGGTTTTTAACCATTTTTTTTAGTGTGTTTTTGAGTCTTTTATACTTATTTAGAGTCTTTTAGTCCTTTATAAAGTCTTTACAGGTTTTAGGTTGATTTGGAAGAGAATTTGGAATTTTGGAGCGAAAATGCAGTTTTGAAAATGCAGGACAGTGCAGAAGGGTCAGAAGTTTGCCATTCATTGAATATCTTCCCGATGTCGGATTGCAGTTATTTTTTGGCACAAGATATCTCTTTGAGTTAGCTTTCATTTGGGACTGGTTTCATGTCATTATCATCAGTGGTTCAAAAGTTATGCCCGTTTTACTGAAGACAGGTCGATCTGGCCAGCAGCTGAAGCAGATGCAGAGTGAGACCTCCGATCGATCGATCCACTATTAGATCGATCGATCCAATTTTGCGTGACATTTTAAGATCGACCACGGCACTCAGGATCGATCGATCCAACCTTGATCGATCGATCCTACTCAGATCGACCGATCCTGTCCAAAAACGAGAAAATAGAAGAATTTCCAGATATGCCCCAGATTGTTCTTATCTCTTTAGGTTTCGACCAAAACCTGTTTAGAACTATAAATAAGGGTTTCTAAGCCATTGTTTAGGCTATGCTTTCATCTCCATTCCAACTTTTCATACCTCATCTCTTAGAGAAGATTTCTTATACTCTTTTCTTATTTAAATTCAATTGTTATGGAGTTTTATTCATTCATTGCTTGTTCATCTCTTGTCATGTCTGAGTAGTCTCTTAGTTAGGTTTTAGGGTTTCAAAAGATTTCATGAATCACTGAATTAGACATAGATAGGGATTTATCATTATTAATCTTCTCCTATTGTTGTTCTCATAGCTTAGACTAAATTGACCACTTAGTCTCTGATTTAGGGTTTAACATATTCTCCAAAAGCTTATAGGTTGCTTGATAGAACATTAGGAGAGCGAATTGTCCTTAACCAACGAAAGCTGATGTTAAGGCAATTCGTGAACAGATTGAACCTGCCTGTTGAATGCTTGTCTATAATTTTGAGTTCAAACGACAGTTTAGAATCTTAGGTTGCTAGACAAAGTAATTGGTGTCACGACAGTGGATTGATTATACAATTATGTTTGAGTTCGAGATTGGTGTTTAATTCATTCCCTGAATAATTGTCTGATTCTTGATTTGTGATTTCCTGCGAATTTCCCTGAAGCCTAGCGCTTTTTAATTCATTGTTTACAACTGTTAGTCTTATTTCTTGTTCACCATACAACAACCCTTTTTTATTCTGTCTTAGCTTCCTAATCAATCTCTATAGCCTGTAGTGTAACCATTGATCCTCGTGGATTCGATCCCTAAGTACTGCAACGTACTAGGATATTTGCATAGACCCGAGTGAAAACTCCAACTATCA
Boechera retrofracta (v1.0)
ID:
scaffold104|size233450_LTR_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
182Start:
193920End:
194101Strand:
+>scaffold104|size233450_LTR_17
TTGCCTTTGAAATTTACGATTTGAGTTTAGTCTTAAATTTTATTTTTATTTTTAAATTAGTTTATTTTTTCATTATTTCTTGTGTGTTTTAGGTGTATGTAGAGAAGAAGACAAGGCTCTAATCTGCTTGCATTCGACAACTACGAGTCAGCGCGACTTGAATGAGAAAACAGAAAGTTGAG
Boechera retrofracta (v1.0)
ID:
scaffold1050|size6976_LTR_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
1087Start:
3End:
1089Strand:
+>scaffold1050|size6976_LTR_18
TCTAATGGAATGCCTAGCGAGTTTCTCAAATGCAAGTTGTTTCCTTTTTCACTTGCGGACAAAGCTTCACGTTGGTTGAAATCACTGCCATCAGGTTCATTGACAACATGGGCTGAGGTTAGAGCAGCATTTTTGGATCACTTCTACACCAAATCGAAAACTGCCGCTTTGAGGAACAAAATATCTTCATTCCAACAACATTCTGGAGAACCTTTCTGTGAAGCTTGGGAAAGGCTGAAAGAATACAGAAGAGAGTGTCCTCACCACGGTTTCAAGGATGAGTAGATCCTAGGTATCTTCTATGATGGTGTTGAGTGGGATTATAGGAATGCGCTGAACGCGGCCAGCAATGGCGATTTTATGACCAAGACTAAGGAAGGCCCTTTCGCGCTAATTGAGAACTTAGCTTCGAGTTCCAGCAACAAGTCTCTTGAGTATGATAGGTCCAAGAAAGCGAACAGCATGGAGACACAGAAGATTGATGAGTTGGCTGCGAAAGTGAGTCTGTTGATGAAGGCAAATCAGAGGGGTGTTCAGCTTTGTGAAGGTGGTACAGAGAATTGGGAAAACACTGAGGAGCTGCAAGAAGTGAGTTATGTTAATGGACAGGGTTTCGTGCAGAACAGGGGTTTTAACCAGAACTACAGAAATCATCCTAATCTATCCTACAGGAGCACAAACGTCGAAAATCCTCAGGAACAAGTCTACCCACAGCAAACAGTTGCTTCAGGCCAACAGTTTCAGAAAAAACGTTCGTGCAAAATTCGGACGTCACAGGTAATTCTCAGGGGTTTACAGGACAGACGAGCGTGCAAAATCCGGGTCAGAATCAGTTTCAGAGTGGTTTTCAGCAGAGTCAGCCATTCAGCAACTTTCAGACACCTGCAAACTCAGCCAGCAGTACTCAAGACAAGCTCGAAGCTCTTATGCAGCAACTTCTACTCCAGCAACAAAAATCCTCTACTGAGATCAACACAAAAGTGGACAACATGTATAACGATCTCAACGACAAATATGAAGCTGTTGCAACTCACTTGAAGCTGCTTGATACTCAGGTTGCTCAGACCGCTGAGACAGTTAAGAGACA
Boechera retrofracta (v1.0)
ID:
scaffold1050|size6976_LTR_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
305Start:
1963End:
2267Strand:
+>scaffold1050|size6976_LTR_19
ATTGAGTACAAGGTGAAGAGCAAAGGTATGTCTAAACCTTTCTCTCAAGTGAGGGCGATAATCACACCAGAACTCAAGGCTAAGGGCCAAGCGGCAATTGACGAGATGATGAGAAAGGTCCTTTGTCTAAGACCACACCCATCCCACCCTGTTCCTCCTGCGGATCCACCACACTGTGCCTAAAAGGCACTCAAGTCGAGCTAAAGACTTAAAACAAGCGCTTTGTGGGAGGCAACCCACAGGTATGTGTTCATATTTCTATTACATCTCTTTGTTTTCTGATGTTTTCATTTTCTAGGTTTCAG
Boechera retrofracta (v1.0)
ID:
scaffold1050|size6976_LTR_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTRLength:
131Start:
3650End:
3780Strand:
+>scaffold1050|size6976_LTR_20
ATCCTATATTAACTAACCCTTTTTGAGTCTTTTTGTGTCTTTCGAGTCGTTTTTGAGCCTTGTCAGGTTAGAATGAAGTCTTGGAGCATGGATTTGATGGACTGGAGCTAATTGAGTTTCTGGAGCAAAAA