Boechera retrofracta (v1.0)
ID:
scaffold10|size7684569_LTR-Ngaro_1Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
237Start:
875558End:
875794Strand:
+>scaffold10|size7684569_LTR-Ngaro_1
ACAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAAATACAAATGCAACAACTCTTGTTACAACAACGTGCACAACAGCAGCAACAGCAGCAGCAGCAACAACAACATCATCATCAGCAACAGCAGCAGCAACAACAACAACAACTTCAAAACCAACCACCTTCTCAACAGCAGCAGCAGCAGCAGCAGCCGGCGCCTCAACACCAACAGCAGCCAACATCACAGCAGCAGCCACA
Boechera retrofracta (v1.0)
ID:
scaffold11|size3486627_LTR-Ngaro_2Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
103Start:
1032438End:
1032540Strand:
->scaffold11|size3486627_LTR-Ngaro_2
GCTGTTGTTGATTAATCTGCATTTGCTGTTGTTGTTGCTGCATCTGCTGTTGTGGTTGCTGCTGTAGTTGTTGCTGCATCTGTTGTATTTGTTGCTGTTGCTG
Boechera retrofracta (v1.0)
ID:
scaffold11|size3486627_LTR-Ngaro_3Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
146Start:
1034251End:
1034396Strand:
->scaffold11|size3486627_LTR-Ngaro_3
TGTTGTTGTTGTTGCTGAAGAATCTGCTGCTGTTGTTGCGATAATTGTGGAATCGGAGATGAAGAGATTTGCTGCAAAATCTGTTGTTGTTGTTGTTGTTGAGGCAATTGCTGAATTTGATTTTGCTGTTGCTGAAGCTGTTGTTG
Boechera retrofracta (v1.0)
ID:
scaffold12|size4842942_LTR-Ngaro_4Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
335Start:
3431300End:
3431634Strand:
+>scaffold12|size4842942_LTR-Ngaro_4
TCAGCAGCAGCAACAACAACAGCTCCAACAACAACAGCAGATCCAGCAGCAGCAGCAACAACAACACCACCAACAGCAACAGATGCCCCAACTCCAGCAACAACAACAACAGCACCAGCAGCAACAGATGCCACAACTCCAGCAACAACAACAACAGCACCAGCAGCAACAGATGCCACAACTCCAGCAGCAGCAGCAACAGATGCCACAACTCCAGCAGCAGCAGCAGCATCAATTGTCGCAGCTCCAACATCATCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCATCAGTTGACACAGCTTCAACACCATCATCAGCAGCAACAGCAGC
Boechera retrofracta (v1.0)
ID:
scaffold12|size4842942_LTR-Ngaro_5Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
144Start:
3912563End:
3912706Strand:
+>scaffold12|size4842942_LTR-Ngaro_5
CAGTTGCAACAGCAGCAGAAGCTTCAGTTGCAACAGCAGCAGAAGATTCAGTTGCAACAGCAGCAGAAGATGCAGTTGCAACAGCATCAGCTGGAACAAGAGCATCAGTTACATCAGAAGCTCTTACAAGAGCAACAACAATCT
Boechera retrofracta (v1.0)
ID:
scaffold12|size4842942_LTR-Ngaro_6Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
170Start:
3999843End:
4000012Strand:
->scaffold12|size4842942_LTR-Ngaro_6
TGTTGAAAATGTAATTGTCGAGCATGGGACTGCTGTTGCTCCTGTAAGAGCTTCTGATGTAGCTGATGCTCTTGTTGCAGCTGATGCTGTTGCAACTGAATCTTCTGCTGTTGTTGCAACTGAATCTTCTGCTGCTGTTGCAACTGAATCTTCTGTTGTTGCTGCAACTG
Boechera retrofracta (v1.0)
ID:
scaffold13|size3762591_LTR-Ngaro_7Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
89Start:
3298796End:
3298884Strand:
->scaffold13|size3762591_LTR-Ngaro_7
GGGGAGTTTCACGTAACCATCATACATATATATACTTTTGCTTAATGTGTAAGTATACATTTGTATATATATATATCTACATATATATA
Boechera retrofracta (v1.0)
ID:
scaffold15|size2678857_LTR-Ngaro_8Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
113Start:
1075336End:
1075448Strand:
->scaffold15|size2678857_LTR-Ngaro_8
TGTTGCTGCTGTTTCTGCAAATGCTGCATCAGAAATAGCTGTTGTTGACGCTGTTGCAGTTGTTGTTGTTGTTGCATTTGAAGTAAGAGTTGCTGTTGTTGCAACTGCTGCTG
Boechera retrofracta (v1.0)
ID:
scaffold16|size2371679_LTR-Ngaro_9Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
90Start:
153594End:
153683Strand:
->scaffold16|size2371679_LTR-Ngaro_9
TAAATATATATGTATCTATGTAGGCATATACATAATATATATATATATATATTTATATGCATGTATGAATCTATGATAGGTTGTTAAGAC
Boechera retrofracta (v1.0)
ID:
scaffold1818|size1722_LTR-Ngaro_10Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
85Start:
1126End:
1210Strand:
->scaffold1818|size1722_LTR-Ngaro_10
GTTATTGTTGTTGTTGTTGTTGTTGCTGCTATTGTTGCTGCTGTTGTTGCTGCTGTTGTTGTTGTTTGTGTTGTTGTTGTTGTTG
Boechera retrofracta (v1.0)
ID:
scaffold18|size2296484_LTR-Ngaro_11Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
197Start:
889768End:
889964Strand:
->scaffold18|size2296484_LTR-Ngaro_11
GATTGTTGCTTCCTCCGCCATTGTTTCTGTTGTTGTTGTCATTGTTATTCCCATTGTTGTTATTGCCATTGTTGTTATTACCACTGTTGTTGTTGTCTTTGTTATTCCCATTGTTGTTGTTGTTGTTGTCATTGTTGTTATTACCATTGTTGTTGTCATTCTTGTTATTACCATTGTTGCCATCATTGTTATTGTTT
Boechera retrofracta (v1.0)
ID:
scaffold19|size3101341_LTR-Ngaro_12Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
138Start:
402673End:
402810Strand:
->scaffold19|size3101341_LTR-Ngaro_12
GCAGAGTCAACAGCATTGAGGGTGCCATTATCGGGAGCAGGAACAGTAGCAGTATCAGTAGCTGTAGCAGGAGCAGGAACAGGAGCAGTAACAGGGGCAGTGACAGGAGCAGTAACAGGGGCAGTGACAGGAGCATTG
Boechera retrofracta (v1.0)
ID:
scaffold1|size8101256_LTR-Ngaro_13Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
188Start:
5508760End:
5508947Strand:
->scaffold1|size8101256_LTR-Ngaro_13
TTGTTGTTGCAACTGTTGCTGTTGGTGCTGCTGCTGCAACTGTTGCTGTTGCTGCACTTGTTGCTGCTGCTGCAGCTGAACCCGTTGCAATGGTGGGAGGGACTGGAGATATTGTTGCTGTTGCCTCAGCTTTTGTTGATGAAGTAAAAGTTGGAACTGTGGATTTTGGCCTTGTTGTTGTTGCTGCT
Boechera retrofracta (v1.0)
ID:
scaffold23|size1898914_LTR-Ngaro_14Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
191Start:
1670510End:
1670700Strand:
+>scaffold23|size1898914_LTR-Ngaro_14
AATATGAATGCACGAATGCATGTGTATAAATGCATGCATGGATGCATGCGTGTATGAATGCATGGATGCATGCGTGTATGAATGCATGGATGCATGCGTGTATGAATGCATGGATGCATGCGTGTATGAATGCATGGATATATGAATGCATAGATGCATGGATGCATGCATTTATGAATGCATGGATATAT
Boechera retrofracta (v1.0)
ID:
scaffold248|size26062_LTR-Ngaro_15Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
82Start:
18708End:
18789Strand:
->scaffold248|size26062_LTR-Ngaro_15
GCTGTTGTTGTTGCTGTTGTTGTTGCTGTTATAGCAACTGTTGCATCTGCTGTTGCAGATTCTGGAGTTGATCAGCTGTAGC
Boechera retrofracta (v1.0)
ID:
scaffold27|size3076990_LTR-Ngaro_16Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
105Start:
2662257End:
2662361Strand:
+>scaffold27|size3076990_LTR-Ngaro_16
AAAAACAACAACAGCAGCTACAGAAGCAGCAGCAGCAGCAACAGCAGCTTCATGAACGGTTACAAGCTCACCATCTTCATCAGCAGCAGCAGCAGCAGCAGCTAC
Boechera retrofracta (v1.0)
ID:
scaffold2|size7652841_LTR-Ngaro_17Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
176Start:
4882653End:
4882828Strand:
+>scaffold2|size7652841_LTR-Ngaro_17
CAGCCGCACAACAGTTCCAGCAGCTCCAGATCCAGTCACAGAAACAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAACAACATCAGCAGCAGCAATTTCAGTTTCAGCAGCAGCAACTGTATCACCTTCAGCAGCAGCAGCAGCGGCTTCAACAACAGGAACAACAAAGC
Boechera retrofracta (v1.0)
ID:
scaffold30636|size387_LTR-Ngaro_18Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
82Start:
168End:
249Strand:
+>scaffold30636|size387_LTR-Ngaro_18
GTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGTCTTTCATTTTTGGGGGTAGGTCTTTTCAACTCTCTA
Boechera retrofracta (v1.0)
ID:
scaffold39|size1397634_LTR-Ngaro_19Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
100Start:
135509End:
135608Strand:
+>scaffold39|size1397634_LTR-Ngaro_19
CAATTTCTATACTTATATATATATATATGTGCATATATATAGAGAGTTATAACTTATAAATACGTGCAAATGTGCATATATATATAGAGAGTTATAACTC
Boechera retrofracta (v1.0)
ID:
scaffold3|size6152117_LTR-Ngaro_20Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-NgaroLength:
115Start:
3654320End:
3654434Strand:
->scaffold3|size6152117_LTR-Ngaro_20
GTTGTTGTTGTTGATGAAGTTGATTCTGATGTATAGCCTCCTGCTGCTGCTGTTGTTGTTGTTGTTGATGATGAAGCTGATTCTGATGTAGCATTTGCTGCTGTTGTTGCTCTTG