ID Class Order Superfamily Length Start End Strand View
scaffold102|size241018_LTR-ERV1_1 RetrotransposonsLTRLTR-ERV11113071830828+
scaffold116|size176984_LTR-ERV1_2 RetrotransposonsLTRLTR-ERV1982864728744-
scaffold13|size3762591_LTR-ERV1_3 RetrotransposonsLTRLTR-ERV11081971719824+
scaffold13|size3762591_LTR-ERV1_4 RetrotransposonsLTRLTR-ERV110215798711579972+
scaffold13|size3762591_LTR-ERV1_5 RetrotransposonsLTRLTR-ERV111935592703559388-
scaffold164|size73735_LTR-ERV1_6 RetrotransposonsLTRLTR-ERV1981607716174+
scaffold164|size73735_LTR-ERV1_7 RetrotransposonsLTRLTR-ERV1982643826535+
scaffold1694|size1986_LTR-ERV1_8 RetrotransposonsLTRLTR-ERV18312951377+
scaffold20|size3674719_LTR-ERV1_9 RetrotransposonsLTRLTR-ERV112517597871759911-
scaffold21|size2590356_LTR-ERV1_10 RetrotransposonsLTRLTR-ERV19718738321873928+
scaffold22|size2017577_LTR-ERV1_11 RetrotransposonsLTRLTR-ERV1219886706886924-
scaffold236|size29231_LTR-ERV1_12 RetrotransposonsLTRLTR-ERV1982266122758-
scaffold23|size1898914_LTR-ERV1_13 RetrotransposonsLTRLTR-ERV18216745991674680-
scaffold23|size1898914_LTR-ERV1_14 RetrotransposonsLTRLTR-ERV110316747441674846-
scaffold27|size3076990_LTR-ERV1_15 RetrotransposonsLTRLTR-ERV113429578192957952+
scaffold2|size7652841_LTR-ERV1_16 RetrotransposonsLTRLTR-ERV18316987341698816-
scaffold2|size7652841_LTR-ERV1_17 RetrotransposonsLTRLTR-ERV113224877092487840-
scaffold31|size1533217_LTR-ERV1_18 RetrotransposonsLTRLTR-ERV1959029290386-
scaffold35|size2995437_LTR-ERV1_19 RetrotransposonsLTRLTR-ERV19826917542691851-
scaffold39|size1397634_LTR-ERV1_20 RetrotransposonsLTRLTR-ERV1112135516135627-

< 1 2 3 > Total 3


Boechera retrofracta (v1.0)

ID:

scaffold102|size241018_LTR-ERV1_1

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

111

Start:

30718  

End:

30828

Strand:

+

>scaffold102|size241018_LTR-ERV1_1

TTGAAGTATTTGATGTGTGGGGCATCGATTTCATGGGGCCTTTTAACCCACCATCTTATGGGAAAAGCTACATCTTGGTGGCTGTTGATTATGTCTCCAAATGGGTTGAAG

Boechera retrofracta (v1.0)

ID:

scaffold116|size176984_LTR-ERV1_2

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

98

Start:

28647  

End:

28744

Strand:

-

>scaffold116|size176984_LTR-ERV1_2

TGGTACACCAAATCTGGGAAAAATGATGCTCTTGAACATCTTCAGAACTGCCTTTGCATCATTGCTAGGGCAAGCTATGGCTTCAACCCACTTCGAGA

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LTR-ERV1_3

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

108

Start:

19717  

End:

19824

Strand:

+

>scaffold13|size3762591_LTR-ERV1_3

TACATTGCATGCATACATACATCTACATACATACATTGAATGCATAAATGCAGACATTTACATACACATTTGCATACATGCATACGTCGATATACATATACAGTACAT

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LTR-ERV1_4

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

102

Start:

1579871  

End:

1579972

Strand:

+

>scaffold13|size3762591_LTR-ERV1_4

TATATATATACCTATATTTATTTATATATATGCATAACTTATATATATATATATATTTATAAAGAATTTATATATATATGTGTGTGTAAATATATTTATATA

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LTR-ERV1_5

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

119

Start:

3559270  

End:

3559388

Strand:

-

>scaffold13|size3762591_LTR-ERV1_5

CTAATTTTGTAGCTGAACATTTATGTTTATACGCATATATACAATACCTATTATACATATATATATATATATATGGGACGAAAATACCTATTATATATGTATATGTATATATAATATAT

Boechera retrofracta (v1.0)

ID:

scaffold164|size73735_LTR-ERV1_6

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

98

Start:

16077  

End:

16174

Strand:

+

>scaffold164|size73735_LTR-ERV1_6

TCTCAAAGTGGGTTGAAGCCATAGCTTGCCCTAGCAATGATGCAAAGGTAGTTCTGAAGATGTTCAAGAGCATTATTTTCCCCAGATTTGGTGTACCA

Boechera retrofracta (v1.0)

ID:

scaffold164|size73735_LTR-ERV1_7

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

98

Start:

26438  

End:

26535

Strand:

+

>scaffold164|size73735_LTR-ERV1_7

TCTCAAAGTGGGTTGAAGCCATAGCTTGCCCTAGCAATGATGCAAAGGTAGTTCTAAAGATGTTCAAGAGCATTATTTTCCCCAGATTTGGTGTACCA

Boechera retrofracta (v1.0)

ID:

scaffold1694|size1986_LTR-ERV1_8

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

83

Start:

1295  

End:

1377

Strand:

+

>scaffold1694|size1986_LTR-ERV1_8

CACATGTTGAAGGATTTCATTAAAAGTCTTAGAAAAGCCAAGTCTGAGCAGATGTGGTGTGGTGTATGCAAGAAGTACAATCA

Boechera retrofracta (v1.0)

ID:

scaffold20|size3674719_LTR-ERV1_9

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

125

Start:

1759787  

End:

1759911

Strand:

-

>scaffold20|size3674719_LTR-ERV1_9

ATATATATATATATATTTATATATAAACACATATATATGTATAGTACAATTTTTTTTTTATAAATATAAGTTATATATACATATAAATATAGGCATATACAAATATATATATATATATATATATA

Boechera retrofracta (v1.0)

ID:

scaffold21|size2590356_LTR-ERV1_10

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

97

Start:

1873832  

End:

1873928

Strand:

+

>scaffold21|size2590356_LTR-ERV1_10

AATAAATAAACGTATGTATTTAATGAGAAGGAATGACTAATTTCTCATCCACAATATTCCTTGGTGGTGAAATTGGGTACACCTTAAAGAGAAAGAG

Boechera retrofracta (v1.0)

ID:

scaffold22|size2017577_LTR-ERV1_11

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

219

Start:

886706  

End:

886924

Strand:

-

>scaffold22|size2017577_LTR-ERV1_11

ATAATTGTGAATCTATAAAAGTAATCAAGTATGTGTGTATGTATCTATGTAAATGTAAAGATGTATATGTGCATGTATCTATGTAAATGTGAAGAGGTATCTATGCATGCATGTATGTATGCATAGTATGTATGCAGATGTATGTATGCATAGTATGTATGCAGATGTATGTATGTACGCATGCATGTAATATATGTATGTATGCAGATGTATGCATGC

Boechera retrofracta (v1.0)

ID:

scaffold236|size29231_LTR-ERV1_12

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

98

Start:

22661  

End:

22758

Strand:

-

>scaffold236|size29231_LTR-ERV1_12

TGGCACACCAAATCTGGGAAAAATGATGCTCTTGAACATCTTCAGAACTGCCTTTGCATCATTGTTAGGGCAAGCTATGGCTTCAACCCACTTCGAGA

Boechera retrofracta (v1.0)

ID:

scaffold23|size1898914_LTR-ERV1_13

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

82

Start:

1674599  

End:

1674680

Strand:

-

>scaffold23|size1898914_LTR-ERV1_13

GTATGCAAGTATACATGTATGCATGTATGAATGTATGCATGTATGTATCCATGAAAGTATATATGAATGTGTATGAATGTAT

Boechera retrofracta (v1.0)

ID:

scaffold23|size1898914_LTR-ERV1_14

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

103

Start:

1674744  

End:

1674846

Strand:

-

>scaffold23|size1898914_LTR-ERV1_14

TGTATGAATGCATGAATGTATGAATGCATGAATGCATGATGAATGTATGCATGTATGTTATGCATGTATGTATGAATGCATGAATGTATGTCTCTTTTCTTCA

Boechera retrofracta (v1.0)

ID:

scaffold27|size3076990_LTR-ERV1_15

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

134

Start:

2957819  

End:

2957952

Strand:

+

>scaffold27|size3076990_LTR-ERV1_15

TATTTATATATATATATATATATATATATATATGTATTTTTAAGAAATTTATATTAAAAAAAAAAATATATATATATATATATATATATATATATATATATAAAGAGGTCACTTGCAAAAGAAATTTAAGTTTA

Boechera retrofracta (v1.0)

ID:

scaffold2|size7652841_LTR-ERV1_16

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

83

Start:

1698734  

End:

1698816

Strand:

-

>scaffold2|size7652841_LTR-ERV1_16

AGAAACTTACTTGCTCTTCGTGTGCACAGCTTGTGACGTGTGTGATAAGGCACTGTGCATGGAAAGAGTGTCCACAAGGAAAG

Boechera retrofracta (v1.0)

ID:

scaffold2|size7652841_LTR-ERV1_17

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

132

Start:

2487709  

End:

2487840

Strand:

-

>scaffold2|size7652841_LTR-ERV1_17

TCAATGGCTTTGCAATACCCCCATACCCTTTGATAAAGCATCTATAATAACCCGCTAATCCCAAGAACCCTTTTAGTTGCTTTACCGTCTTAGGAACTTGCCAATCTTTGACTGTTTTCACTTTATTTGGGT

Boechera retrofracta (v1.0)

ID:

scaffold31|size1533217_LTR-ERV1_18

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

95

Start:

90292  

End:

90386

Strand:

-

>scaffold31|size1533217_LTR-ERV1_18

ATGTGCATGTGTTTTTGTATGTATGCATGTACCTTTACATATGCTTATTATACATGTATGTAATTATATATTATGCTTATGCATGTGTGTAAGTA

Boechera retrofracta (v1.0)

ID:

scaffold35|size2995437_LTR-ERV1_19

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

98

Start:

2691754  

End:

2691851

Strand:

-

>scaffold35|size2995437_LTR-ERV1_19

TGGTACACCAAATCTGGGAAAAATGATGCTCTTGAACATCTTCAGAACTGCCTTTGCATCATTGCTAGGGCAAGCTATGGCTTCAACCCACTTCGAGA

Boechera retrofracta (v1.0)

ID:

scaffold39|size1397634_LTR-ERV1_20

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-ERV1

Length:

112

Start:

135516  

End:

135627

Strand:

-

>scaffold39|size1397634_LTR-ERV1_20

TATACTTATATATATATATATGTGCATATATATAGAGAGTTATAACTTATAAATACGTGCAAATGTGCATATATATATAGAGAGTTATAACTCGTACAAATGGATATACACA