ID Class Order Superfamily Length Start End Strand View
scaffold10|size7684569_LINE-Penelope_1 RetrotransposonsLINELINE-Penelope8814104741410561-
scaffold10|size7684569_LINE-Penelope_2 RetrotransposonsLINELINE-Penelope17572783177278491-
scaffold13|size3762591_LINE-Penelope_3 RetrotransposonsLINELINE-Penelope15615679471568102+
scaffold1673|size2083_LINE-Penelope_4 RetrotransposonsLINELINE-Penelope99810908-
scaffold1818|size1722_LINE-Penelope_5 RetrotransposonsLINELINE-Penelope10112781378-
scaffold18|size2296484_LINE-Penelope_6 RetrotransposonsLINELINE-Penelope1495285953007+
scaffold18|size2296484_LINE-Penelope_7 RetrotransposonsLINELINE-Penelope9220451372045228-
scaffold19|size3101341_LINE-Penelope_8 RetrotransposonsLINELINE-Penelope153802936803088+
scaffold1|size8101256_LINE-Penelope_9 RetrotransposonsLINELINE-Penelope11348153824815494+
scaffold22|size2017577_LINE-Penelope_10 RetrotransposonsLINELINE-Penelope212883578883789+
scaffold23|size1898914_LINE-Penelope_11 RetrotransposonsLINELINE-Penelope22716746081674834+
scaffold2446|size1181_LINE-Penelope_12 RetrotransposonsLINELINE-Penelope9983181-
scaffold33|size1474841_LINE-Penelope_13 RetrotransposonsLINELINE-Penelope103603068603170+
scaffold33|size1474841_LINE-Penelope_14 RetrotransposonsLINELINE-Penelope103605434605536+
scaffold33|size1474841_LINE-Penelope_15 RetrotransposonsLINELINE-Penelope103608682608784+
scaffold33|size1474841_LINE-Penelope_16 RetrotransposonsLINELINE-Penelope100611049611148+
scaffold35|size2995437_LINE-Penelope_17 RetrotransposonsLINELINE-Penelope15811789901179147-
scaffold38|size1256534_LINE-Penelope_18 RetrotransposonsLINELINE-Penelope119976378976496-
scaffold39|size1397634_LINE-Penelope_19 RetrotransposonsLINELINE-Penelope103135492135594+
scaffold3|size6152117_LINE-Penelope_20 RetrotransposonsLINELINE-Penelope119611070611188+

< 1 2 3 > Total 3


Boechera retrofracta (v1.0)

ID:

scaffold10|size7684569_LINE-Penelope_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

88

Start:

1410474  

End:

1410561

Strand:

-

>scaffold10|size7684569_LINE-Penelope_1

CATGCAATATACAAACACATATATATATATATATATGTGTGTGTATATGTAACAATTTAAGTGCATGTGATACACATATATATAGACA

Boechera retrofracta (v1.0)

ID:

scaffold10|size7684569_LINE-Penelope_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

175

Start:

7278317  

End:

7278491

Strand:

-

>scaffold10|size7684569_LINE-Penelope_2

CACATGCATATATATATTTGTGGACATACATTCAAGGTTGTGGACATACATGTATGGTTATGGACATATATATTCGTTCATAGACATACATATATGCTCGTAGACACATATACGTTCGTGGACATACATAGCCGGTCGTGGACATACATATTCGCTCGTGGACATATATAAATGT

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LINE-Penelope_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

156

Start:

1567947  

End:

1568102

Strand:

+

>scaffold13|size3762591_LINE-Penelope_3

ATGTGATATATTTGTGTCTATATAAATGTATATTTATATATATATATATTACATGTTCATGTCCCAGACATGTGTATATAAATATAGCATAATTCTTGTGAATTTTTTTAACATTTACACTATGTGATATATATGTATATAAATGTACATATACAT

Boechera retrofracta (v1.0)

ID:

scaffold1673|size2083_LINE-Penelope_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

99

Start:

810  

End:

908

Strand:

-

>scaffold1673|size2083_LINE-Penelope_4

AAGATCTATATATATCTATATCTATAGTATTTTACTATTTTTTCATCGTCATATATAGTATATTATATATGTTTGTACATATATATACCTATATGTATA

Boechera retrofracta (v1.0)

ID:

scaffold1818|size1722_LINE-Penelope_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

101

Start:

1278  

End:

1378

Strand:

-

>scaffold1818|size1722_LINE-Penelope_5

AAGATCTATATATATCTATATCTATAGTATTTTACTATTTTTTCATCGTCATATATAGTATATTATATATGCTTGTACATATATATATACCTATATGTATA

Boechera retrofracta (v1.0)

ID:

scaffold18|size2296484_LINE-Penelope_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

149

Start:

52859  

End:

53007

Strand:

+

>scaffold18|size2296484_LINE-Penelope_6

ATATATGTATGATGTAGAATATGTTACTGAATTATATAATACATATGTGTGTCTCTGTATCTATATCTATATATGTAGTGTAGGTATGTATATATACATAGACATTATAAATGTGTACATGCATACCAATATATATTTGTATTCATACA

Boechera retrofracta (v1.0)

ID:

scaffold18|size2296484_LINE-Penelope_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

92

Start:

2045137  

End:

2045228

Strand:

-

>scaffold18|size2296484_LINE-Penelope_7

ATATATGTGTTCATAATACATACATTGATACACACATTACACATATACATAGGCCTAAATGGCAATGCACATATATATATATATATATGTGT

Boechera retrofracta (v1.0)

ID:

scaffold19|size3101341_LINE-Penelope_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

153

Start:

802936  

End:

803088

Strand:

+

>scaffold19|size3101341_LINE-Penelope_8

TATATTTATATAAATATGTGTGTGTGTGGAGGTCTAAACATACATGTACATGCAAGATATATATATATCATGAACTTGTATGTGTATATGGACATTAACGAAACGTAAATACTCCTTATGATCATTATTTTCCTTCTCTCTCTCTCTCATCTC

Boechera retrofracta (v1.0)

ID:

scaffold1|size8101256_LINE-Penelope_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

113

Start:

4815382  

End:

4815494

Strand:

+

>scaffold1|size8101256_LINE-Penelope_9

ATGCATATATAATATATTATCAATCTAATTACATGTATATTAATATATATATATATATAGTGTGTATGTGTGAGACCAAACATAAATACATACATCCATGTGACCATGTTTAT

Boechera retrofracta (v1.0)

ID:

scaffold22|size2017577_LINE-Penelope_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

212

Start:

883578  

End:

883789

Strand:

+

>scaffold22|size2017577_LINE-Penelope_10

TACATGAATGTGTATGCACATGCATGAATGTATGCATGTATGCTTATGCATGTATGTGCTTATGCATGTATGTGCTTATGCATGAATGTATGCATGTATATGCTTATGCATGAATGTATGCATGTATATGCTTATGCATGTATAGATGCACGTGTATGCTTATGCATGTATAGATGCACGTGTATGTAATATATGTATATGCTTATGCATGT

Boechera retrofracta (v1.0)

ID:

scaffold23|size1898914_LINE-Penelope_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

227

Start:

1674608  

End:

1674834

Strand:

+

>scaffold23|size1898914_LINE-Penelope_11

TATACATGTATGCATGTATGAATGTATGCATGTATGTATCCATGAAAGTATATATGAATGTGTATGAATGTATGCATGTCTGTATGAATGAATGTATGTATGTATGTATGCATGGGTGCATGAATGTATGCATGTATGTATGAATGCATGAATGTATGAATGCATGAATGCATGATGAATGTATGCATGTATGTTATGCATGTATGTATGAATGCATGAATGTATGT

Boechera retrofracta (v1.0)

ID:

scaffold2446|size1181_LINE-Penelope_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

99

Start:

83  

End:

181

Strand:

-

>scaffold2446|size1181_LINE-Penelope_12

AAGATCTATATATATCTATATCTATAGTATTTTACTATTTTTTCATCGTCATATATAGTATATTATATATGCTTGTACATATATATACCTATATGTATA

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LINE-Penelope_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

103

Start:

603068  

End:

603170

Strand:

+

>scaffold33|size1474841_LINE-Penelope_13

TACATGTATGTATAAATATCCATGTATGTGCATAGATGTATTGTAATGCATGTGTTGCAACTTATAAGTATGTATATATCATATATATCACATATGTATGTGT

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LINE-Penelope_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

103

Start:

605434  

End:

605536

Strand:

+

>scaffold33|size1474841_LINE-Penelope_14

TACATTTATGTATAAATATCCATGTATGTGCATAGATGTATTGTAATGCATGTGTTGCAACTTATAAATATGTATATATCATATATATCACATATGTATGTGT

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LINE-Penelope_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

103

Start:

608682  

End:

608784

Strand:

+

>scaffold33|size1474841_LINE-Penelope_15

TACATGTATGTATAAATATCCATGTATGTGCATAGATGTATTGTAATGCATGTGTTGCAACTTATAAATATGTATATATCATATATATCACATATGTATGTGT

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LINE-Penelope_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

100

Start:

611049  

End:

611148

Strand:

+

>scaffold33|size1474841_LINE-Penelope_16

TGTATGTATAAATATCCATGTATGTGCATAGATGTATTGTAATGCATGTGTTACAACTTATAAATATGTATATATCATATATATCACATATGTATGTGTG

Boechera retrofracta (v1.0)

ID:

scaffold35|size2995437_LINE-Penelope_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

158

Start:

1178990  

End:

1179147

Strand:

-

>scaffold35|size2995437_LINE-Penelope_17

ATATATATATACATATACATATATATACAATAAATAATTTTCTAATAAATATACTTCTTTGTATATTATACATATATATATATATGGATATGAATAGAGACATATATACATATATATATATGATTTTTACCAATATATATATATATATATATATGTTA

Boechera retrofracta (v1.0)

ID:

scaffold38|size1256534_LINE-Penelope_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

119

Start:

976378  

End:

976496

Strand:

-

>scaffold38|size1256534_LINE-Penelope_18

ATAAATATATATATGTGTGTGTGTATATATGTATATGTATATACAAATTCATATATATATATAAAGAAACATATATATATGTATATATAAATCTGGAGTGAATCACATATCTGCATATA

Boechera retrofracta (v1.0)

ID:

scaffold39|size1397634_LINE-Penelope_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

103

Start:

135492  

End:

135594

Strand:

+

>scaffold39|size1397634_LINE-Penelope_19

AATATGTACCATATGTCCAATTTCTATACTTATATATATATATATGTGCATATATATAGAGAGTTATAACTTATAAATACGTGCAAATGTGCATATATATATA

Boechera retrofracta (v1.0)

ID:

scaffold3|size6152117_LINE-Penelope_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-Penelope

Length:

119

Start:

611070  

End:

611188

Strand:

+

>scaffold3|size6152117_LINE-Penelope_20

TATAGAACAGTTGTTATACATTCATGTGTATGTGTATAAATGCATATATATTACGCATATAGTATAGTTGTTATACATTCATGTGTATGTTTCGTCCCTATATGTATATATGTATAGAT