TBGR-Browse-Bre-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffold102\|size241018_LINE-L1-Tx1_1	Retrotransposons	LINE	LINE-L1-Tx1	110	170545	170654	+
scaffold122\|size154707_LINE-L1-Tx1_2	Retrotransposons	LINE	LINE-L1-Tx1	109	83457	83565	+
scaffold13\|size3762591_LINE-L1-Tx1_3	Retrotransposons	LINE	LINE-L1-Tx1	105	1336422	1336526	+
scaffold13\|size3762591_LINE-L1-Tx1_4	Retrotransposons	LINE	LINE-L1-Tx1	113	1336924	1337036	+
scaffold14\|size2922549_LINE-L1-Tx1_5	Retrotransposons	LINE	LINE-L1-Tx1	102	1151660	1151761	+
scaffold16\|size2371679_LINE-L1-Tx1_6	Retrotransposons	LINE	LINE-L1-Tx1	102	198545	198646	-
scaffold20\|size3674719_LINE-L1-Tx1_7	Retrotransposons	LINE	LINE-L1-Tx1	123	540796	540918	+
scaffold21\|size2590356_LINE-L1-Tx1_8	Retrotransposons	LINE	LINE-L1-Tx1	95	1253060	1253154	+
scaffold23\|size1898914_LINE-L1-Tx1_9	Retrotransposons	LINE	LINE-L1-Tx1	87	1281318	1281404	-
scaffold27\|size3076990_LINE-L1-Tx1_10	Retrotransposons	LINE	LINE-L1-Tx1	161	2915306	2915466	-
scaffold2\|size7652841_LINE-L1-Tx1_11	Retrotransposons	LINE	LINE-L1-Tx1	110	2046376	2046485	-
scaffold2\|size7652841_LINE-L1-Tx1_12	Retrotransposons	LINE	LINE-L1-Tx1	86	6244058	6244143	+
scaffold3070\|size983_LINE-L1-Tx1_13	Retrotransposons	LINE	LINE-L1-Tx1	86	576	661	+
scaffold32\|size3253261_LINE-L1-Tx1_14	Retrotransposons	LINE	LINE-L1-Tx1	91	1392107	1392197	-
scaffold32\|size3253261_LINE-L1-Tx1_15	Retrotransposons	LINE	LINE-L1-Tx1	133	2273071	2273203	-
scaffold36\|size1449105_LINE-L1-Tx1_16	Retrotransposons	LINE	LINE-L1-Tx1	82	911483	911564	+
scaffold40\|size1215721_LINE-L1-Tx1_17	Retrotransposons	LINE	LINE-L1-Tx1	95	166511	166605	-
scaffold43\|size1126307_LINE-L1-Tx1_18	Retrotransposons	LINE	LINE-L1-Tx1	86	722492	722577	+
scaffold46\|size946041_LINE-L1-Tx1_19	Retrotransposons	LINE	LINE-L1-Tx1	93	513112	513204	-
scaffold4\|size9045706_LINE-L1-Tx1_20	Retrotransposons	LINE	LINE-L1-Tx1	87	74543	74629	+

Boechera retrofracta (v1.0)

ID:

scaffold102|size241018_LINE-L1-Tx1_1

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

170545

End:

170654

Strand:

+

>scaffold102|size241018_LINE-L1-Tx1_1

CTTATTCCTAAGAAAATGACAACTCTTGACATGAAAGATTATCGACCTATATTTTGCTACAATGTGCTTTACAAAGTTTTCCCTAAGATTTTGGCTAACAGGTTGAAGAA

Boechera retrofracta (v1.0)

ID:

scaffold122|size154707_LINE-L1-Tx1_2

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

109

Start:

83457

End:

83565

Strand:

+

>scaffold122|size154707_LINE-L1-Tx1_2

ATAAGGCAAGGAGACCCTTTATCGCCTTATATATTCATTTTTTGTGCAGAACCTTTGATTGCTAATCTCAAAAAGGTTGAGAAATACAAAAAGTTAACGGGACTGAAGA

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LINE-L1-Tx1_3

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

105

Start:

1336422

End:

1336526

Strand:

+

>scaffold13|size3762591_LINE-L1-Tx1_3

AAGATATTCAGAGTACTTTATTCTCTATGCCGAATAATAAATCACCCGGTCCTGATGGCTATACTGCCGAATTTTTTAAGAGCTTTTGGGCAATCATAGGACATG

Boechera retrofracta (v1.0)

ID:

scaffold13|size3762591_LINE-L1-Tx1_4

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

113

Start:

1336924

End:

1337036

Strand:

+

>scaffold13|size3762591_LINE-L1-Tx1_4

TCCACTAGATAAAGCTCTGCATTACTACGGCTTCATTTTTCGTTTAAGTCAATGGAGAACTTGTTTGTTTCTTTCGAAGTTCATGAGGTCTAAGGCAAGGTTGTGCTCTCTCA

Boechera retrofracta (v1.0)

ID:

scaffold14|size2922549_LINE-L1-Tx1_5

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

102

Start:

1151660

End:

1151761

Strand:

+

>scaffold14|size2922549_LINE-L1-Tx1_5

TCCCAAAGAAAGACAAGACCATGGAGATGAAAGATTATAGACCAATTGCTTGTTGTAATGTCCTCTATAAGGTGATATCGAAGATTCTTGCCAACAGATTGA

Boechera retrofracta (v1.0)

ID:

scaffold16|size2371679_LINE-L1-Tx1_6

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

102

Start:

198545

End:

198646

Strand:

-

>scaffold16|size2371679_LINE-L1-Tx1_6

TGCCTTTTTTTATTACACAGAAGAAAACATAGTTTCATTAATGTAGCACCTTTATTACCTTTACTAACAATTCAATAAACATGTGGCAAGAAAAAAGAATAC

Boechera retrofracta (v1.0)

ID:

scaffold20|size3674719_LINE-L1-Tx1_7

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

123

Start:

540796

End:

540918

Strand:

+

>scaffold20|size3674719_LINE-L1-Tx1_7

CTTCAATCCAACCAGAGGGATAAGGCAAGGAGATCCACTTTCTCCCTTCCTTTTTATCCTGGTAGCTGAGGTCCTCGGAGCAGCAGTATCTAGGACAAACGAGATAGACAAGATTCATGGGAT

Boechera retrofracta (v1.0)

ID:

scaffold21|size2590356_LINE-L1-Tx1_8

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

95

Start:

1253060

End:

1253154

Strand:

+

>scaffold21|size2590356_LINE-L1-Tx1_8

GAAAAGGTGGAGGAAGAGAGCGAGAGACCTGATCCATTTCTTGATTGAAAAGCAACAAAAGCAAACAATTGAAAACCCTAATTAATTAATTAATC

Boechera retrofracta (v1.0)

ID:

scaffold23|size1898914_LINE-L1-Tx1_9

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

1281318

End:

1281404

Strand:

-

>scaffold23|size1898914_LINE-L1-Tx1_9

AAAAATAAAATATAAAGTTATAAACCCTAACCCTAACAACTCTCCAAAGTCCAAACCGATAAAATTAGAGAGAGAGAGAGAGAGAGA

Boechera retrofracta (v1.0)

ID:

scaffold27|size3076990_LINE-L1-Tx1_10

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

161

Start:

2915306

End:

2915466

Strand:

-

>scaffold27|size3076990_LINE-L1-Tx1_10

TCTGCCTTTAACCAAAGCTGCTTGATTCTCTGAGATGACATGAGGAAGAATGAGCTTGAGTCTAGAAGCCATCACCTTGGAAATGATCTTGTAAATGTAGTTGCATAAGCTGATGGGGCGGAACTCATTTAGTTGTTTCTAATTTCTGATCTTTGGTATCA

Boechera retrofracta (v1.0)

ID:

scaffold2|size7652841_LINE-L1-Tx1_11

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

2046376

End:

2046485

Strand:

-

>scaffold2|size7652841_LINE-L1-Tx1_11

ATATTGTATGATATTAGTCTTCCCTTCACGAAGGCAGCCTGATTCTCCGTGATTACTTGTGGCAAGATTGACTTTAATCTTGTAGCAATTACTTTTGAGACTACCTTGTA

Boechera retrofracta (v1.0)

ID:

scaffold2|size7652841_LINE-L1-Tx1_12

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

6244058

End:

6244143

Strand:

+

>scaffold2|size7652841_LINE-L1-Tx1_12

GAAAATGTTGTCTGAAAAAAAAAAAAAAAAACAGTGGAGTTTAAAGTAAAAAATTGTGGAATCTCTGTCTCTCTCTCTCTCTCTCT

Boechera retrofracta (v1.0)

ID:

scaffold3070|size983_LINE-L1-Tx1_13

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

576

End:

661

Strand:

+

>scaffold3070|size983_LINE-L1-Tx1_13

GTTTTTAGTCATTAGGTCAAGGGGGATTTTGACAGACTTGACTTCACTTCTATTTTTGAGCCACCATTGAGATTTGAGAGCTTTTG

Boechera retrofracta (v1.0)

ID:

scaffold32|size3253261_LINE-L1-Tx1_14

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

91

Start:

1392107

End:

1392197

Strand:

-

>scaffold32|size3253261_LINE-L1-Tx1_14

CAGCAATTAGATCATTACCAATAATCGGCCATGTTGATTTGAAGAATTCCATAGTAAAACCATCTGGTCCCGGTGCCTTATTCAAAGCCAT

Boechera retrofracta (v1.0)

ID:

scaffold32|size3253261_LINE-L1-Tx1_15

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

133

Start:

2273071

End:

2273203

Strand:

-

>scaffold32|size3253261_LINE-L1-Tx1_15

TTGATTTAAAGAGATTATTTGAGGAAGTAATATCTTTAATCTATTGGCTAAAATCTTTGATACCACTTTATATATGACATTACAACACGATATCGGCCTGTAATCCTTTATATCCAATGCTTCTTCTTTCTTA

Boechera retrofracta (v1.0)

ID:

scaffold36|size1449105_LINE-L1-Tx1_16

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

911483

End:

911564

Strand:

+

>scaffold36|size1449105_LINE-L1-Tx1_16

TTGGAATGATGATAGCACAAACAAAAGATACTGAAGCTATCGAAATTTGAACAGTTGGGATTTTGGGATGCTCCCAATTGAA

Boechera retrofracta (v1.0)

ID:

scaffold40|size1215721_LINE-L1-Tx1_17

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

95

Start:

166511

End:

166605

Strand:

-

>scaffold40|size1215721_LINE-L1-Tx1_17

AAAAAAGACTTCATTGCAGCCACAATGTCATCACCCAACATAGACCATGAAGCCTTAAAAAATTCAGCAGTAAATCCATCCGGCCCCGGAGCCTT

Boechera retrofracta (v1.0)

ID:

scaffold43|size1126307_LINE-L1-Tx1_18

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

722492

End:

722577

Strand:

+

>scaffold43|size1126307_LINE-L1-Tx1_18

GTTTTTAGTCATTAGGTCAAGGGGGATTTTGACAGACTTGACTTCACTTCTATTTTTGAGCCACCATTGAGATTTGAGAGCTTTTG

Boechera retrofracta (v1.0)

ID:

scaffold46|size946041_LINE-L1-Tx1_19

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

513112

End:

513204

Strand:

-

>scaffold46|size946041_LINE-L1-Tx1_19

AAACTGTTCTGAAACTCGTTTTGATGCATTTTGTGTTTTTTGTCAAAAAACTTGTAGAAACTCTTAAAACTACAAATATTTGAAAAAATCTTT

Boechera retrofracta (v1.0)

ID:

scaffold4|size9045706_LINE-L1-Tx1_20

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

74543

End:

74629

Strand:

+

>scaffold4|size9045706_LINE-L1-Tx1_20

GATATGCCTTCAAATAAATCTCCAGGACCGGATGGATTTACTGTGGAATTCTATAAATCGGCTTGGTCGATTGTAGGAAATGATTTG